SMED30024068

Overview
NameSMED30024068
Smed IDSMED30024068
Length (bp)811
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024068

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30024068 SmedASXL_068951SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30024068 dd_Smed_v4_31837_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30024068 dd_Smed_v4_31837_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30024068 vs. TrEMBL
Match: A0A2G8LCX0 (Integrase catalytic domain-containing protein OS=Stichopus japonicus OX=307972 GN=BSL78_04960 PE=4 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.619e-9
Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = -1 
Query:  266 RYL--FVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIW--IDNYRTERVL*KNEL--QCIFNPPAA 520
            RYL  F C K++ +HLE A GLDT+S    L R  +RR +P  I SDNG NF G  N    ++  ID  + ER   K  +  + + NPP A
Sbjct:  135 RYLCLFTCMKTRAVHLEMAFGLDTDSFINCLYRFTSRRGIPSEIRSDNGTNFVGARNEFIKLFDTIDKAKVERDTSKKGINWKWVLNPPLA 225

HSP 2 Score: 38.5058 bits (88), Expect = 2.619e-9
Identity = 32/114 (28.07%), Postives = 53/114 (46.49%), Query Frame = -3 
Query:  501 LIFSDRSWISKLIVKDFHKKKHQYAG------VLDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRF-AKPLRAFAQMK*ILLVNFKPKQTKVKVS----LCMF 809
            +I   +  +++LIVK+ H++    AG      +L   +WL+   + I+  EN      R K +G   +MAP  + R     LRAF ++       F  KQ + K+     LC+F
Sbjct:   27 IILPRKHPVTRLIVKEHHEEGKHIAGTNHTLALLSNKYWLIGGREEIREWENACNECKRGKPRGGQQIMAPLPKSRTNVDTLRAFDKVSVDFAGPFLTKQGRGKIKTKRYLCLF 140
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BLAST of SMED30024068 vs. TrEMBL
Match: A0A2B4RBS5 (Uncharacterized protein OS=Stylophora pistillata OX=50429 GN=AWC38_SpisGene22069 PE=4 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 3.234e-9
Identity = 26/86 (30.23%), Postives = 47/86 (54.65%), Query Frame = -3 
Query:  570 LIFSDRSWISKLIVKDFHKK------KHQYAGVLDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRFAKPLRAFAQ 809
            +I   + W++KLIV+ +H++       HQ   +L   FWL++  + I+  + +     R+KAK +  +MAP  + R   P RAF++
Sbjct:  381 IILPRKEWVTKLIVRWYHQQGNHPSGTHQTLAMLSSRFWLMQRREEIRECKGECYECRRRKAKAAQQVMAPLPKIRLKMPPRAFSR 466

HSP 2 Score: 44.2838 bits (103), Expect = 3.234e-9
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = -1 
Query:  341 RQR*RYL--FVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENI 532
            R+  RYL  F C  S+ LHLE A GLDT+S   A  R+A+RR +P+ + SDNG NF G +  +  +
Sbjct:  484 RRAKRYLCLFTCLTSRALHLEIAYGLDTDSFLNAFCRMASRRGLPEEMISDNGNNFVGADLELREL 549
[Close]
BLAST of SMED30024068 vs. TrEMBL
Match: A0A2G8KMP0 (Integrase_H2C2 domain-containing protein OS=Stichopus japonicus OX=307972 GN=BSL78_13912 PE=4 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 7.791e-8
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = -1 
Query:  314 LFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIW--IDNYRTER 514
            LF C K++ +HLE A GLDT+S    L R  +RR +P  I SDNG NF G  N    ++  ID  + ER
Sbjct:  139 LFTCMKTRAVHLEMAFGLDTDSFINCLYRFTSRRGIPSEIRSDNGTNFVGARNEFIKLFDTIDKAKVER 207

HSP 2 Score: 36.5798 bits (83), Expect = 7.791e-8
Identity = 31/114 (27.19%), Postives = 52/114 (45.61%), Query Frame = -3 
Query:  501 LIFSDRSWISKLIVKDFHKKKHQYAG------VLDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRF-AKPLRAFAQMK*ILLVNFKPKQTKVKVS----LCMF 809
            +I   +  +++LIVK+ H +    AG      +L   +WL+   + I+  EN      R K +G   +MAP  + R     +RAF ++       F  KQ + K+     LC+F
Sbjct:   27 IILPRKHPVTRLIVKEHHVEGKHIAGTNHTLALLSNKYWLIGGREEIREWENTCNECKRGKPRGGQQIMAPLPKSRTNVDTMRAFDKVSVDFAGQFLTKQGRGKIKTKRYLCLF 140
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BLAST of SMED30024068 vs. TrEMBL
Match: A0A0S7GQ49 (PPUP5170 (Fragment) OS=Poeciliopsis prolifica OX=188132 GN=PPUP5170 PE=4 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.275e-7
Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = -1 
Query:  263 RY--LFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERV---L*KNELQCIFNPPAAS 520
            RY  LF C  ++ +HLE A  LDTES   AL R   RR  P+ I SDNG NF G  + +    ++ +  +++   L + E Q  FNPPAAS
Sbjct:  353 RYGCLFTCLTTRAVHLEVAHSLDTESFINALQRFMARRGTPQLIRSDNGTNFVGARHELRKA-LEGWNQQKIEDHLLQRETQWKFNPPAAS 442

HSP 2 Score: 30.4166 bits (67), Expect = 1.275e-7
Identity = 31/103 (30.10%), Postives = 49/103 (47.57%), Query Frame = -3 
Query:  501 ISKLIVKDFHKKKHQYAGV------LDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMA--PRSQFRFAKPLRAFAQMK*ILLVNFKPKQTKVKVSLCMF 785
            I+KLI+  FHK    ++GV      + + FW++R    ++ +  Q V   RQKA  ST  MA  P  +    KP  A   +     +  K  +++VK   C+F
Sbjct:  257 ITKLIIWHFHKLT-GHSGVERVLADIRQFFWIVRGRASVKQVLAQCVPCKRQKAPISTQYMADLPIDRVTPCKPPFAHVGIDYFGPITIKRGRSEVKRYGCLF 358
[Close]
BLAST of SMED30024068 vs. TrEMBL
Match: A0A2B4RBG6 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Stylophora pistillata OX=50429 GN=Nod2 PE=4 SV=1)

HSP 1 Score: 45.4394 bits (106), Expect = 2.416e-6
Identity = 29/86 (33.72%), Postives = 44/86 (51.16%), Query Frame = -3 
Query:  570 LIFSDRSWISKLIVKDFHKK------KHQYAGVLDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRFAKPLRAFAQ 809
            +I   +S+++KLI K +H+K       +Q    L   FW++   + I   E +     R+KAK +  +MAP  Q R    LRAFAQ
Sbjct: 1603 IILPRKSYVTKLIDKHYHEKDDHAGGTNQLLAALSTRFWIISGREEICEWEKECNECRRRKAKAAKQIMAPLPQIRLRYSLRAFAQ 1688

HSP 2 Score: 35.039 bits (79), Expect = 2.416e-6
Identity = 26/85 (30.59%), Postives = 44/85 (51.76%), Query Frame = -1 
Query:  266 LFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENI--WIDNYRTERVL*KNELQCIFNPPAA 514
            LF C  S+ +++E A  LDT++   A  R+ NRR +P+ +  DNG N  G N  + ++   +D  +  +      ++   NPP A
Sbjct: 1714 LFTCLASRAVYVEMAYALDTDAFLNAFYRMVNRRGLPREMLCDNGGNLVGGNRELSDLVKELDQEKIAKSTANQGIKWQSNPPHA 1798
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BLAST of SMED30024068 vs. Planmine SMEST
Match: SMESG000000866.1 (SMESG000000866.1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.573e-27
Identity = 38/89 (42.70%), Postives = 61/89 (68.54%), Query Frame = -1 
Query:  263 QR*RYLFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERVL*KNELQCIFNPPAAS 529
            +R  +LFVC K++ +H+E A  LDT++  +A +R  + + MP+ + SDNG NF G  +H+ NI ID+Y  E+ L ++E + +FNPP+AS
Sbjct:  158 KRYMFLFVCLKTRAVHIELAYKLDTDAFIKAFLRFTSLQEMPQLMLSDNGTNFVGAASHLRNIVIDSYMVEKELSRHECRWLFNPPSAS 246

HSP 2 Score: 63.1586 bits (152), Expect = 3.573e-27
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = -3 
Query:  570 LIFSDRSWISKLIVKDFHKKKHQYAGV------LDKIFWLLRAIQIIQVIENQRVGYCRQ-KAKGST*LMAPRSQFRFAKPLRAFAQ 809
            +I SD+S I+KLI++D ++  + YAGV      L++ +W+L+A ++I   E+   G CRQ KAKG T +MA    FR ++PLR F  
Sbjct:   52 IILSDKSLIAKLIIRDIYESLNHYAGVQHVLSALNEKYWILKARKLIINCESSCKG-CRQRKAKGMTQMMATLPSFRLSEPLRGFVH 137
[Close]
BLAST of SMED30024068 vs. Planmine SMEST
Match: SMESG000041215.1 (SMESG000041215.1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.160e-24
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = -3 
Query:  567 LIFSDRSWISKLIVKDFHKKKHQYAGV------LDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRFAKPLRAFAQM 809
            +I SD SWI++LI+K+ H K   YAGV      L++ +W++ A ++I+          R+KAKG   +MAP   FRF +PL+AFA++
Sbjct: 1262 IILSDESWIARLIIKELHVKNKDYAGVNHTLGELNREYWVVCARKLIKKCMKGCFECRRRKAKGMEQIMAPLPSFRFQEPLQAFARI 1348

HSP 2 Score: 63.929 bits (154), Expect = 5.160e-24
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = -1 
Query:  266 NQSRQR*RY--LFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERVL*KNELQCIFNPPAA 541
             ++RQ+ RY  LF C +++ +HLE A  LDT++  RA IR   RR  P  I SDNG NF G  N ++ I +D+YR  + +  N++  IFNPP A
Sbjct: 1363 GKTRQK-RYMCLFTCLQTRAVHLEVAHALDTDAFIRAFIRFMGRREKPLMILSDNGTNFVGATNKVQEIKVDSYRFNKFMSGNDIIWIFNPPLA 1455
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BLAST of SMED30024068 vs. Planmine SMEST
Match: SMESG000043416.1 (SMESG000043416.1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.569e-20
Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = -3 
Query:  567 LIFSDRSWISKLIVKDFHKKKHQYAGV------LDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRFAKPLRAFAQM 809
            +I SD SWI++LI+K+ H K   YAGV      L++ +W++ A ++I+    +     R+KAKG   +MAP   FRF +PL+AFA++
Sbjct:  128 IILSDESWIARLIIKELHVKNKHYAGVNHTLGKLNRKYWVVCARKLIKKCIKRCFECRRRKAKGMEQIMAPLPSFRFQEPLQAFARI 214

HSP 2 Score: 51.9878 bits (123), Expect = 2.569e-20
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = -1 
Query:  266 VCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERVL*KNELQCIFNPPAA 508
            V F    +HLE A  LDT++   A IR   RR  P  I SDNG NF G  N ++ I +D+Y+  + +  N+++ IFN P A
Sbjct:  216 VDFAGPAVHLEVAYALDTDAFIHAFIRFMGRRGKPLMILSDNGTNFVGATNEVQEIKVDSYKFNKFMSGNDIRWIFNSPLA 296
[Close]
BLAST of SMED30024068 vs. Planmine SMEST
Match: SMESG000043416.1 (SMESG000043416.1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.930e-20
Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = -3 
Query:  567 LIFSDRSWISKLIVKDFHKKKHQYAGV------LDKIFWLLRAIQIIQVIENQRVGYCRQKAKGST*LMAPRSQFRFAKPLRAFAQM 809
            +I SD SWI++LI+K+ H K   YAGV      L++ +W++ A ++I+    +     R+KAKG   +MAP   FRF +PL+AFA++
Sbjct:  127 IILSDESWIARLIIKELHVKNKHYAGVNHTLGKLNRKYWVVCARKLIKKCIKRCFECRRRKAKGMEQIMAPLPSFRFQEPLQAFARI 213

HSP 2 Score: 51.9878 bits (123), Expect = 2.930e-20
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = -1 
Query:  266 VCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERVL*KNELQCIFNPPAA 508
            V F    +HLE A  LDT++   A IR   RR  P  I SDNG NF G  N ++ I +D+Y+  + +  N+++ IFN P A
Sbjct:  215 VDFAGPAVHLEVAYALDTDAFIHAFIRFMGRRGKPLMILSDNGTNFVGATNEVQEIKVDSYKFNKFMSGNDIRWIFNSPLA 295
[Close]
BLAST of SMED30024068 vs. Planmine SMEST
Match: SMESG000041327.1 (SMESG000041327.1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.539e-12
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = -1 
Query:  266 NQSRQR*RY--LFVCFKSKELHLE*ATGLDTESSXXXXXXXXXXXRMPKTISSDNGKNFEGTNNHMENIWIDNYRTERVL*KNELQCIFNPPAA 541
             ++RQ+ RY  LF C +++ +HLE A  LDT +  RA IR   RR  P  I SDNG NF G  N ++ I +D+YR  + +  N+++ IFNPP A
Sbjct:   71 GKTRQK-RYMCLFTCLQTRAVHLEVAYALDTNAFIRAFIRFMGRRGKPLMILSDNGTNFVGATNEVQEIKVDSYRFNKFMSGNDIRWIFNPPLA 163
The following BLAST results are available for this feature:
BLAST of SMED30024068 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2G8LCX02.619e-941.76Integrase catalytic domain-containing protein OS=S... [more]
A0A2B4RBS53.234e-930.23Uncharacterized protein OS=Stylophora pistillata O... [more]
A0A2G8KMP07.791e-844.93Integrase_H2C2 domain-containing protein OS=Sticho... [more]
A0A0S7GQ491.275e-741.76PPUP5170 (Fragment) OS=Poeciliopsis prolifica OX=1... [more]
A0A2B4RBG62.416e-633.72Nucleotide-binding oligomerization domain-containi... [more]
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BLAST of SMED30024068 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024068 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000000866.13.573e-2742.70SMESG000000866.1[more]
SMESG000041215.15.160e-2440.23SMESG000041215.1[more]
SMESG000043416.12.569e-2040.23SMESG000043416.1[more]
SMESG000043416.12.930e-2040.23SMESG000043416.1[more]
SMESG000041327.13.539e-1243.62SMESG000041327.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024068 ID=SMED30024068|Name=SMED30024068|organism=Schmidtea mediterranea sexual|type=transcript|length=811bp
GGGGGGTTCACCGAACAAGGCCAAAATAAAAAGAAAAATCCGCTGCAATT
CAAAAAATATCAAATCGCAAATAATAATTAAAATGCAAAAAATTGATTTA
AAAAAATTTAAATAAATATTTTCCTGGAAACTGATATGAGAAAATGTCAA
ATGATAAGACGAATTCAAATATAATTAAGTATAATAGATGGGGGTCTCCA
GAAGGAAATAACTAAAAATTAATTAGTTTATGGAGAACCCGAGCAATGTT
GGAAACTCGGATAGAAGCTGCAGGTGGGTTGAAAATGCATTGTAACTCAT
TCTTCTATAGCACTCTTTCCGTCCTATAATTATCAATCCATATATTTTCC
ATGTGATTATTCGTTCCCTCAAAATTCTTTCCATTATCGGATGATATAGT
TTTTGGCATTCTTCTTCTATTTGCTAATCTTATCAATGCCCTATTAGATG
ATTCTGTATCTAACCCCGTTGCCTATTCCAGGTGCAATTCTTTCGATTTA
AAACATACAAAGAGATACCTTTACCTTTGTCTGCTTTGGTTTGAAATTAA
CTAGCAATATTCACTTCATTTGTGCAAACGCTCTAAGTGGCTTCGCGAAT
CTAAACTGAGATCGTGGAGCCATTAGTTATGTTGATCCTTTCGCTTTTTG
TCTGCAATATCCAACGCGCTGATTTTCTATTACCTGTATTATTTGTATTG
CTCGCAACAGCCAAAATATTTTATCCAAAACTCCAGCATACTGATGTTTC
TTTTTATGAAAATCTTTTACGATCAACTTCGATATCCAACTTCTATCACT
GAATATTAAAG
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
PLANA:0002109X1 cell
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding