Sesquipedalian-1

Overview
NameSesquipedalian-1
Smed IDSMED30024040
Length (bp)816
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Sesquipedalian-1 (SMED30024040) t-SNE clustered cells

Violin plots show distribution of expression levels for Sesquipedalian-1 (SMED30024040) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Sesquipedalian-1 (SMED30024040) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Sesquipedalian-1 (SMED30024040) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024040

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30024040SMESG000053122.1 dd_Smed_v4_5038_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30024040SMESG000053122.1 dd_Smed_v4_5038_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30024040SMESG000053122.1 dd_Smed_v4_5038_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Human
Match: PHETA1 (PH domain containing endocytic trafficking adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26509])

HSP 1 Score: 80.1073 bits (196), Expect = 5.007e-17
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQ 557
             N ++L F    ++  D  G+L KK      +Y RR+FVL GN+  YFE    +  EP+GVI+LE   VE+ +   +EFAF ++         + Y+ A+ES+  ++ W +AL  A  DY  +   EL  Q+ A++
Sbjct:   16 LNERSLAFYATCDAPVDNAGFLYKKGGR-HAAYHRRWFVLRGNMLFYFED--AASREPVGVIILEGCTVELVEA-AEEFAFAVRFAGTR---ARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQLAAVR 144
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Human
Match: PHETA1 (PH domain containing endocytic trafficking adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26509])

HSP 1 Score: 79.337 bits (194), Expect = 6.741e-17
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQ 557
             N ++L F    ++  D  G+L KK      +Y RR+FVL GN+  YFE    +  EP+GVI+LE   VE+ +   +EFAF ++         + Y+ A+ES+  ++ W +AL  A  DY  +   EL  Q+ A++
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKKGGR-HAAYHRRWFVLRGNMLFYFED--AASREPVGVIILEGCTVELVEA-AEEFAFAVRFAGTR---ARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQLAAVR 131
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Human
Match: PHETA1 (PH domain containing endocytic trafficking adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26509])

HSP 1 Score: 79.337 bits (194), Expect = 6.741e-17
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQ 557
             N ++L F    ++  D  G+L KK      +Y RR+FVL GN+  YFE    +  EP+GVI+LE   VE+ +   +EFAF ++         + Y+ A+ES+  ++ W +AL  A  DY  +   EL  Q+ A++
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKKGGR-HAAYHRRWFVLRGNMLFYFED--AASREPVGVIILEGCTVELVEA-AEEFAFAVRFAGTR---ARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQLAAVR 131
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Human
Match: PHETA1 (PH domain containing endocytic trafficking adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26509])

HSP 1 Score: 72.7886 bits (177), Expect = 1.268e-15
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 3 
Query:  156 NFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDY 509
            N ++L F    ++  D  G+L KK      +Y RR+FVL GN+  YFE    +  EP+GVI+LE   VE+  +  +EFAF ++         + Y+ A+ES+  ++ W +AL  A  DY
Sbjct:    4 NERSLAFYATCDAPVDNAGFLYKKGGR-HAAYHRRWFVLRGNMLFYFED--AASREPVGVIILEGCTVELV-EAAEEFAFAVRFA---GTRARTYVLAAESQDAMEGWVKALSRASFDY 115
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Human
Match: PHETA2 (PH domain containing endocytic trafficking adaptor 2 [Source:HGNC Symbol;Acc:HGNC:27161])

HSP 1 Score: 57.7658 bits (138), Expect = 2.859e-9
Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLL----KKSSETKKSYQRR-YFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDP-KQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKD 587
            M++      ++ +++S AD  G+L       +  T     RR +FVL GNL   FE        PL +++LE   VE+ + P  +EFAF I     D   V+ ++ A+E     + W + L  A   Y  +   EL +Q++  ++ +A Q +  
Sbjct:    1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESR--EGRAPLSLVVLEGCTVELAEAPVPEEFAFAICF---DAPGVRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSS 149
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Fly
Match: IPIP (gene:FBgn0031768 transcript:FBtr0079183)

HSP 1 Score: 72.0182 bits (175), Expect = 2.376e-14
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 3 
Query:  216 LKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE----IIACQFKKDKTAK------IFNREYNPFNDSETERIDPNLRSLFLMT 683
            L K  E  K++QRRYFVL GNL  YFE     D EPLG+I++E   +E+ ++    + F+I          + YI A+E++  ++ W +AL  AG +Y  +   EL  Q++ +++    ++       + A          R  NPFN       D +LR   +M+
Sbjct:   23 LNKRGEVNKAFQRRYFVLKGNLLFYFESR--LDKEPLGLIIVEGCTIELSNE-VDNYCFEIAFNGN-----RTYILAAENQDSMETWMKALTCAGYEYKRIILAELKRQLQEMEDARNKMLGSALDGPQNASESAKPRPPPRRTNPFNRPAPPPPDSSLRGGVVMS 180
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Fly
Match: IPIP (gene:FBgn0031768 transcript:FBtr0079184)

HSP 1 Score: 72.0182 bits (175), Expect = 2.376e-14
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 3 
Query:  216 LKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE----IIACQFKKDKTAK------IFNREYNPFNDSETERIDPNLRSLFLMT 683
            L K  E  K++QRRYFVL GNL  YFE     D EPLG+I++E   +E+ ++    + F+I          + YI A+E++  ++ W +AL  AG +Y  +   EL  Q++ +++    ++       + A          R  NPFN       D +LR   +M+
Sbjct:   23 LNKRGEVNKAFQRRYFVLKGNLLFYFESR--LDKEPLGLIIVEGCTIELSNE-VDNYCFEIAFNGN-----RTYILAAENQDSMETWMKALTCAGYEYKRIILAELKRQLQEMEDARNKMLGSALDGPQNASESAKPRPPPRRTNPFNRPAPPPPDSSLRGGVVMS 180
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Fly
Match: IPIP (gene:FBgn0031768 transcript:FBtr0343120)

HSP 1 Score: 72.0182 bits (175), Expect = 2.376e-14
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 3 
Query:  216 LKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE----IIACQFKKDKTAK------IFNREYNPFNDSETERIDPNLRSLFLMT 683
            L K  E  K++QRRYFVL GNL  YFE     D EPLG+I++E   +E+ ++    + F+I          + YI A+E++  ++ W +AL  AG +Y  +   EL  Q++ +++    ++       + A          R  NPFN       D +LR   +M+
Sbjct:   23 LNKRGEVNKAFQRRYFVLKGNLLFYFESR--LDKEPLGLIIVEGCTIELSNE-VDNYCFEIAFNGN-----RTYILAAENQDSMETWMKALTCAGYEYKRIILAELKRQLQEMEDARNKMLGSALDGPQNASESAKPRPPPRRTNPFNRPAPPPPDSSLRGGVVMS 180
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Match: si:ch211-193c2.2 (si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-163])

HSP 1 Score: 85.8853 bits (211), Expect = 1.483e-19
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAK 599
            M++      ++   NS  DK G+L KK  E   +Y RR+ +L GN+  YFE+      EP+GVI+LE   VE+ +   +EFAF IK    +    + Y  A+E++  ++ W +AL  A  DY  +  +EL  Q++ +QE       K KT K
Sbjct:    1 MKLNERSVAHYATCNSPPDKTGFLFKKG-ERNTAYHRRWCILKGNMLFYFEER--ESREPIGVIVLEGCTVELCESESEEFAFAIKF---ECAKARVYKMAAENQAAMESWVKALSRASFDYMRLVVKELERQLEEVQEEARSSQAKSKTKK 146
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Match: si:ch211-193c2.2 (si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-163])

HSP 1 Score: 85.8853 bits (211), Expect = 1.483e-19
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAK 599
            M++      ++   NS  DK G+L KK  E   +Y RR+ +L GN+  YFE+      EP+GVI+LE   VE+ +   +EFAF IK    +    + Y  A+E++  ++ W +AL  A  DY  +  +EL  Q++ +QE       K KT K
Sbjct:    1 MKLNERSVAHYATCNSPPDKTGFLFKKG-ERNTAYHRRWCILKGNMLFYFEER--ESREPIGVIVLEGCTVELCESESEEFAFAIKF---ECAKARVYKMAAENQAAMESWVKALSRASFDYMRLVVKELERQLEEVQEEARSSQAKSKTKK 146
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Match: si:ch211-193c2.2 (si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-163])

HSP 1 Score: 85.8853 bits (211), Expect = 1.483e-19
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAK 599
            M++      ++   NS  DK G+L KK  E   +Y RR+ +L GN+  YFE+      EP+GVI+LE   VE+ +   +EFAF IK    +    + Y  A+E++  ++ W +AL  A  DY  +  +EL  Q++ +QE       K KT K
Sbjct:    1 MKLNERSVAHYATCNSPPDKTGFLFKKG-ERNTAYHRRWCILKGNMLFYFEER--ESREPIGVIVLEGCTVELCESESEEFAFAIKF---ECAKARVYKMAAENQAAMESWVKALSRASFDYMRLVVKELERQLEEVQEEARSSQAKSKTKK 146
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Match: zgc:153733 (zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273])

HSP 1 Score: 55.0694 bits (131), Expect = 1.986e-8
Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEM 518
            M+I      ++L   S  DK GYL KK  E   +Y RR+FVL GNL  Y E+    D   LGVI+LE  +V+  +   Q F F +         ++ Y  A++     + W  AL  A   Y  M
Sbjct:    1 MKIHKKILTHYLSCTSPVDKEGYLYKKR-ERNTTYLRRWFVLKGNLLFYQER--PGDRNLLGVIVLEGCMVQACETDGQ-FCFSLVF---TGPGLRTYRLAADDHLSQESWIAALFCASHIYLSM 118
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Match: zgc:153733 (zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273])

HSP 1 Score: 55.0694 bits (131), Expect = 1.986e-8
Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEM 518
            M+I      ++L   S  DK GYL KK  E   +Y RR+FVL GNL  Y E+    D   LGVI+LE  +V+  +   Q F F +         ++ Y  A++     + W  AL  A   Y  M
Sbjct:    1 MKIHKKILTHYLSCTSPVDKEGYLYKKR-ERNTTYLRRWFVLKGNLLFYQER--PGDRNLLGVIVLEGCMVQACETDGQ-FCFSLVF---TGPGLRTYRLAADDHLSQESWIAALFCASHIYLSM 118
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Match: lactb2 (lactamase beta 2 [Source:Xenbase;Acc:XB-GENE-954710])

HSP 1 Score: 80.4925 bits (197), Expect = 2.749e-17
Identity = 46/140 (32.86%), Postives = 79/140 (56.43%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEI 563
            M++      ++  + S AD  GYL K+  +   +YQ+R+FVL GNL  YFE+    + EP+GV++LE   +E+     +E AF ++    D    ++YI A+E++ E++ W +AL  A  DY  +   EL  Q++ +Q+ 
Sbjct:    1 MKLNERSMAHYATSGSPADCTGYLYKRGVK-HTAYQKRWFVLKGNLLFYFEEQ--GNKEPVGVVVLEGCAIELCHS-NEEHAFCVRF---DGPGSRSYILAAETQEEMECWVKALSRASFDYMRLVVRELERQLELMQKT 133
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Match: ENSXETT00000033445.1 (PH domain containing endocytic trafficking adaptor 2 [Source:NCBI gene;Acc:100488560])

HSP 1 Score: 79.7221 bits (195), Expect = 4.084e-17
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 3 
Query:  171 NFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEI 563
            ++  + S AD  GYL K+  +   +YQ+R+FVL GNL  YFE+    + EP+GV++LE   +E+     +E AF ++    D    ++YI A+E++ E++ W +AL  A  DY  +   EL  Q++ +Q+ 
Sbjct:    3 HYATSGSPADCTGYLYKRGVK-HTAYQKRWFVLKGNLLFYFEEQ--GNKEPVGVVVLEGCAIELCHS-NEEHAFCVRF---DGPGSRSYILAAETQEEMECWVKALSRASFDYMRLVVRELERQLELMQKT 126
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Match: ENSXETT00000024362.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:9:7905611:7906458:1 gene:ENSXETG00000015346.1 transcript:ENSXETT00000024362.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 73.9442 bits (180), Expect = 1.231e-15
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 3 
Query:  177 LINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKAL 554
            ++  S  ++ GYLLKK S     YQRR+F+L GNL  Y+EK    D +PLGVI+LE+  V +    + EFAF +          + Y  A+ES+ +L+ W +AL +A   Y +   +E+  Q + L
Sbjct:   11 MLAGSAPERQGYLLKKGSRNHSPYQRRWFLLWGNLLFYYEKQ--GDPQPLGVIVLERCSVSL-RPSRLEFAFSLY------SLSRVYKMAAESQKDLELWVKALFSANVGYTKALLDEVQGQYQIL 127
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Match: ENSXETT00000037890.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:1:154621533:154623160:1 gene:ENSXETG00000014324.1 transcript:ENSXETT00000037890.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 69.707 bits (169), Expect = 1.267e-13
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 3 
Query:  174 FLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQ 557
            +  + S  DK G+L KK  +   SY +R+FVL GN   YF+       EPLGVI+LE   VE+ +   +EFAF IK    +    K YI A++++  ++ W +AL  A  +Y  +   EL  Q+K +Q
Sbjct:   11 YATSKSPVDKRGFLFKKG-DRNTSYNKRWFVLKGNTLFYFDNE--ESKEPLGVIILEGCRVELCEST-EEFAFAIKF---EYTKSKAYILAADNQITMESWVKALSRANFEYIRLVVVELQKQLKEMQ 131
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Match: sf3b4 (splicing factor 3b subunit 4 [Source:Xenbase;Acc:XB-GENE-492933])

HSP 1 Score: 50.0618 bits (118), Expect = 1.214e-6
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 3 
Query:  192 KADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIK 401
            K  + G+LLK     K ++++R+F+L  N   YFE   I+D EPLG+I LE   VEI +D K+   F + 
Sbjct:  187 KPQREGWLLKTGGRVK-TWKKRWFILKDNCLYYFEC--ITDKEPLGIIPLENLSVEIVEDSKKPNCFDLH 253
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Match: Pheta1 (PH domain containing endocytic trafficking adaptor 1 [Source:MGI Symbol;Acc:MGI:2442708])

HSP 1 Score: 83.1889 bits (204), Expect = 2.694e-18
Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE 560
             N ++L F    ++  D  G+L K+      S+ RR+FVL GN+  YFE       EPLGVILLE   VE+ D  ++EFAF ++      +P   Y+ A++S+  L+ W +AL  A   Y  +   EL  Q+ A++E
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKRGGRGTGSH-RRWFVLRGNILFYFEA--EGSREPLGVILLEGCTVELVDA-REEFAFAVRFAGGRSRP---YVLAADSQAALEGWVKALSRASFHYLRLVVRELEQQLAAMRE 132
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Match: Pheta1 (PH domain containing endocytic trafficking adaptor 1 [Source:MGI Symbol;Acc:MGI:2442708])

HSP 1 Score: 83.1889 bits (204), Expect = 2.694e-18
Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE 560
             N ++L F    ++  D  G+L K+      S+ RR+FVL GN+  YFE       EPLGVILLE   VE+ D  ++EFAF ++      +P   Y+ A++S+  L+ W +AL  A   Y  +   EL  Q+ A++E
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKRGGRGTGSH-RRWFVLRGNILFYFEA--EGSREPLGVILLEGCTVELVDA-REEFAFAVRFAGGRSRP---YVLAADSQAALEGWVKALSRASFHYLRLVVRELEQQLAAMRE 132
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Match: Pheta1 (PH domain containing endocytic trafficking adaptor 1 [Source:MGI Symbol;Acc:MGI:2442708])

HSP 1 Score: 64.3142 bits (155), Expect = 6.765e-13
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELK 470
             N ++L F    ++  D  G+L K+      S+ RR+FVL GN+  YFE       EPLGVILLE   VE+  D ++EFAF ++      +P   Y+ A++S+  L+
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKRGGRGTGSH-RRWFVLRGNILFYFEAE--GSREPLGVILLEGCTVELV-DAREEFAFAVRFAGGRSRP---YVLAADSQAALE 102
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Match: Pheta2 (PH domain containing endocytic trafficking adaptor 2 [Source:MGI Symbol;Acc:MGI:2443609])

HSP 1 Score: 62.3882 bits (150), Expect = 5.068e-11
Identity = 43/148 (29.05%), Postives = 73/148 (49.32%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLK----KSSETKKSYQRRY-FVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDP-KQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIA 569
            M++      ++ +++S AD  G+L       S  T     RRY FVL GNL   FE        PL +++LE   VE+ + P  +EFAF I+    D   V+ ++ A++ +   + W +AL  A   Y  +   EL +Q++  ++ +A
Sbjct:    1 MKLNKRSVAHYALSDSPADHTGFLRSWGGPGSPPTPSGTGRRYWFVLKGNLLFSFETR--ESRVPLSLVVLEGCTVELAEAPVPEEFAFAIRF---DAPGVRPHLLAADGQAAQEAWVKALSRASFGYMRLVVRELESQLQDARQSLA 143
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Match: Pheta2 (PH domain containing endocytic trafficking adaptor 2 [Source:MGI Symbol;Acc:MGI:2443609])

HSP 1 Score: 62.3882 bits (150), Expect = 5.068e-11
Identity = 43/148 (29.05%), Postives = 73/148 (49.32%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLK----KSSETKKSYQRRY-FVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDP-KQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIA 569
            M++      ++ +++S AD  G+L       S  T     RRY FVL GNL   FE        PL +++LE   VE+ + P  +EFAF I+    D   V+ ++ A++ +   + W +AL  A   Y  +   EL +Q++  ++ +A
Sbjct:    1 MKLNKRSVAHYALSDSPADHTGFLRSWGGPGSPPTPSGTGRRYWFVLKGNLLFSFETR--ESRVPLSLVVLEGCTVELAEAPVPEEFAFAIRF---DAPGVRPHLLAADGQAAQEAWVKALSRASFGYMRLVVRELESQLQDARQSLA 143
[Close]
BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Match: sp|D3ZL52|SESQ1_RAT (Sesquipedalian-1 OS=Rattus norvegicus OX=10116 GN=Pheta1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.113e-18
Identity = 50/137 (36.50%), Postives = 75/137 (54.74%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE 560
             N ++L F    ++  D  G+L K+      S+ RR+FVL GN+  YFE    S  EPLGVILLE   VE+ D  ++EFAF ++      +P   Y+ A++S+  L+ W +AL  A   Y  +   EL  Q+ A++E
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKRGGRGAGSH-RRWFVLRGNILFYFES--ESSREPLGVILLEGCTVELVDA-REEFAFAVRFAGGRSRP---YVLAADSQAALEGWVKALSRASFHYLRLVVRELEQQLAAMRE 132
[Close]
BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Match: sp|Q8BH49|SESQ1_MOUSE (Sesquipedalian-1 OS=Mus musculus OX=10090 GN=Pheta1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.884e-17
Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQE 560
             N ++L F    ++  D  G+L K+      S+ RR+FVL GN+  YFE       EPLGVILLE   VE+ D  ++EFAF ++      +P   Y+ A++S+  L+ W +AL  A   Y  +   EL  Q+ A++E
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKRGGRGTGSH-RRWFVLRGNILFYFEA--EGSREPLGVILLEGCTVELVDA-REEFAFAVRFAGGRSRP---YVLAADSQAALEGWVKALSRASFHYLRLVVRELEQQLAAMRE 132
[Close]
BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Match: sp|Q8N4B1|SESQ1_HUMAN (Sesquipedalian-1 OS=Homo sapiens OX=9606 GN=PHETA1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.237e-16
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQ 557
             N ++L F    ++  D  G+L KK      +Y RR+FVL GN+  YFE    +  EP+GVI+LE   VE+ +   +EFAF ++         + Y+ A+ES+  ++ W +AL  A  DY  +   EL  Q+ A++
Sbjct:    3 LNERSLAFYATCDAPVDNAGFLYKKGGR-HAAYHRRWFVLRGNMLFYFED--AASREPVGVIILEGCTVELVEA-AEEFAFAVRFAGTR---ARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQLAAVR 131
[Close]
BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Match: sp|Q14B98|SESQ2_MOUSE (Sesquipedalian-2 OS=Mus musculus OX=10090 GN=Pheta2 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 3.614e-10
Identity = 43/148 (29.05%), Postives = 73/148 (49.32%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLK----KSSETKKSYQRRY-FVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDP-KQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIA 569
            M++      ++ +++S AD  G+L       S  T     RRY FVL GNL   FE        PL +++LE   VE+ + P  +EFAF I+    D   V+ ++ A++ +   + W +AL  A   Y  +   EL +Q++  ++ +A
Sbjct:    1 MKLNKRSVAHYALSDSPADHTGFLRSWGGPGSPPTPSGTGRRYWFVLKGNLLFSFETR--ESRVPLSLVVLEGCTVELAEAPVPEEFAFAIRF---DAPGVRPHLLAADGQAAQEAWVKALSRASFGYMRLVVRELESQLQDARQSLA 143
[Close]
BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Match: sp|Q6ICB4|SESQ2_HUMAN (Sesquipedalian-2 OS=Homo sapiens OX=9606 GN=PHETA2 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.373e-8
Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLL----KKSSETKKSYQRR-YFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDP-KQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKD 587
            M++      ++ +++S AD  G+L       +  T     RR +FVL GNL   FE        PL +++LE   VE+ + P  +EFAF I     D   V+ ++ A+E     + W + L  A   Y  +   EL +Q++  ++ +A Q +  
Sbjct:    1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESR--EGRAPLSLVVLEGCTVELAEAPVPEEFAFAICF---DAPGVRPHLLAAEGPAAQEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSS 149
[Close]
BLAST of Sesquipedalian-1 vs. TrEMBL
Match: A0A0R3SZA1 (PH domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS11094 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.344e-22
Identity = 71/211 (33.65%), Postives = 107/211 (50.71%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAK-----IFNREYNPFNDSET----ERID----------PNLRSLFLMTFDEMHSEAREHF 719
            M+IFN KT+         +K GYLLKK SE K S++RRYFVL GN+ IY E       EPLGVI LE + VE+ D+      FQ           ++Y+  +ES+ E + W +AL   GS++  +  EEL + ++AL    +   KKD  ++     +  R  NPFN S +    ER             +L  +  ++++++H  ARE+ 
Sbjct:    1 MKIFNEKTVINFSYPKPPEKEGYLLKKRSENKHSFKRRYFVLRGNILIYSETK--MSREPLGVIFLEGHSVELVDERMFAIHFQT-----SSYTGRSYVLQAESDAEAESWMQALAHCGSEFLTLSVEELEDALRALNGSSSVAVKKDDASRQTSPSVCTR--NPFNMSSSTPSRERSQLLQQTSNQSVSHLIHVLALSWEKLHVSAREYL 202
[Close]
BLAST of Sesquipedalian-1 vs. TrEMBL
Match: A0A564YUP8 (PH domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS9709 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.141e-22
Identity = 71/211 (33.65%), Postives = 107/211 (50.71%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAK-----IFNREYNPFNDSET----ERID----------PNLRSLFLMTFDEMHSEAREHF 719
            M+IFN KT+         +K GYLLKK SE K S++RRYFVL GN+ IY E       EPLGVI LE + VE+ D+      FQ           ++Y+  +ES+ E + W +AL   GS++  +  EEL + ++AL    +   KKD  ++     +  R  NPFN S +    ER             +L  +  ++++++H  ARE+ 
Sbjct:    1 MKIFNEKTVINFSYPKPPEKEGYLLKKRSENKHSFKRRYFVLRGNILIYSETK--MSREPLGVIFLEGHSVELVDERMFAIHFQT-----SSYTGRSYVLQAESDAEAESWMQALAHCGSEFLTLSVEELEDALRALNGSSSVAVKKDDASRQTSPSVCTR--NPFNMSSSTPSRERNQLLQQTSNQSVSHLIHVLALSWEKLHVSAREYL 202
[Close]
BLAST of Sesquipedalian-1 vs. TrEMBL
Match: A0A0R3TWJ0 (PH domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS12212 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.167e-22
Identity = 76/209 (36.36%), Postives = 109/209 (52.15%), Query Frame = 3 
Query:  144 MRIFNFKT-LNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFE-KLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKD-----KTAKIFNREYNPFNDSETERIDPNLRS------------LFLMTFDEMHSEARE 713
            M+IFN KT +NF    S  +K GYLLKK SE K S++RRYFVL GN+ IY E KL     EPLGVI LE + VE+ D+  + FA             ++Y   +ES+ E + W +AL   GS++  +  EEL + ++AL        KKD      +  ++ R  NPFN S T    PN R+               ++++++H+  RE
Sbjct:    1 MKIFNEKTVINFSYPKS-PEKEGYLLKKHSENKHSFKRRYFVLRGNILIYSETKL---SKEPLGVIFLEGHSVELVDE--RMFAIHFHTST---YAGRSYFLQAESDAEAESWMQALAHCGSEFLTLSVEELEDTLRALNSSNNIASKKDDAFRQTSPAVYTR--NPFNMSPT---SPNGRNQTSNKSVSHLVHALALSWEKLHASTRE 195
[Close]
BLAST of Sesquipedalian-1 vs. TrEMBL
Match: A0A3P7KUY9 (PH domain-containing protein OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS4586 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.852e-21
Identity = 67/207 (32.37%), Postives = 114/207 (55.07%), Query Frame = 3 
Query:  138 SQMRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDK-TAKIFNREYNPFN------------DSETERIDPNLRSLFLMTFDEMHSEAREHF 719
            S  R+FN KT+++   N+  DK G+L KK S+ K S+++RYF+L GN+ +Y E     D EPLG+ILLE + +E+ +D  + FA  +  G  D +  ++Y+  +E++ E + W +AL   GS++  +  EEL +Q++AL      Q    + T     R  NPFN             +  E+I  +L  L+ +++D++   A+ +F
Sbjct:    2 SSGRLFNEKTISYHFTNTTPDKTGFLWKKPSDGKGSFKKRYFILSGNMLVYSEH--KDDKEPLGLILLEGHFIELLED--RTFAI-LFTGENDLR--RSYVLKAENDTEAEAWMQALTHCGSEFLLLSVEELEDQLRALMSSEDTQSVPPRITGSPPKR--NPFNPLSASPATTYMVSASREKIT-HLERLYQLSWDDLQCTAKAYF 198
[Close]
BLAST of Sesquipedalian-1 vs. TrEMBL
Match: A0A154NYR8 (Sesquipedalian-1 OS=Dufourea novaeangliae OX=178035 GN=WN55_09530 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.878e-21
Identity = 61/196 (31.12%), Postives = 103/196 (52.55%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAKIFNRE-YNPFNDSETERIDPNLRSL---------FLMTFDEMHS 701
            M+I     + F  + +  D+ G+L K+  E  + YQRR+FVL GN+  YF++    D EP+G+I+LE   +E+ +D +++F FQI     + +   NY  A+ES+  ++ W +AL  A  DY ++   EL  Q+ A +E         ++ K   R+ +NPFN  E+     ++RS            +TF E+H+
Sbjct:    1 MKINEKNMVAFATSATPVDREGWLNKRG-ELNRGYQRRWFVLKGNILFYFDRR--GDKEPVGMIVLEGCTIELAED-EEQFGFQIVFHGPNNR---NYALAAESQESMEQWMKALACASYDYMKLMAAELQRQLDAAEEETTLVVPPSQSPKAPPRQRHNPFNRPESHHRSQSVRSAPGRTENVPRTRITFRELHT 189
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Match: zgc:153733 (sesquipedalian-1-like [Source:NCBI gene;Acc:103044774])

HSP 1 Score: 64.3142 bits (155), Expect = 1.069e-11
Identity = 47/125 (37.60%), Postives = 62/125 (49.60%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEM 518
            M+I      ++L   S  DK GYL KK  E   SY RR+FVL GNL  Y E+   +D   LGVI+LE  VV+   DP   F+F +         ++ Y  A+E     + W  ALLTA   Y  +
Sbjct:    1 MKIHKKILTHYLSCTSPVDKEGYLYKKR-ERNTSYLRRWFVLKGNLLFYQER--PADRSLLGVIVLEGCVVQA-GDPDGLFSFSLVFTGPG---LRTYRLAAEDHLTQESWISALLTASHIYISL 118
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Match: ENSAMXT00000033245.1 (sesquipedalian-1-like [Source:NCBI gene;Acc:103046327])

HSP 1 Score: 57.3806 bits (137), Expect = 2.287e-9
Identity = 41/133 (30.83%), Postives = 71/133 (53.38%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQ 542
            M+I      ++L  ++   K GYL KK  E   SYQ+R+  L GNL  Y ++    D E LGVI+LE   V++ +  +Q FAF +      E  ++ Y F++E++   + W +A+ +A  ++  +  ++L  Q
Sbjct:    1 MKIHGKILNHYLTCSAPVVKEGYLYKKG-EVNTSYQKRWVTLKGNLLFYQDR--PRDREVLGVIVLEGCSVQLCESDEQ-FAFSLVF---SEAGLRTYKFSAENQTSQELWVKAIHSAHHNFLSILLQDLRQQ 126
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Match: si:ch211-193c2.2 (si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-163])

HSP 1 Score: 51.6026 bits (122), Expect = 8.639e-8
Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLE 344
            M++      ++   NS  DK G+L KK  E   SY RR+ VL GN+  YFE+      EP+GVI++E
Sbjct:    1 MKLNERSVAHYATCNSPPDKTGFLWKKG-ERNPSYHRRWCVLKGNMLFYFEER--ESREPVGVIVME 64
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Match: ENSAMXT00000010738.2 (sesquipedalian-1-like [Source:NCBI gene;Acc:103046327])

HSP 1 Score: 50.447 bits (119), Expect = 5.906e-7
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 3 
Query:  228 SETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQ 542
             E   SYQ+R+  L GNL  Y ++    D E LGVI+LE   V++ +  +Q FAF +      E  ++ Y F++E++   + W +A+ +A  ++  +  ++L  Q
Sbjct:   38 GEVNTSYQKRWVTLKGNLLFYQDR--PRDREVLGVIVLEGCSVQLCESDEQ-FAFSLVF---SEAGLRTYKFSAENQTSQELWVKAIHSAHHNFLSILLQDLRQQ 136
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Match: cyth4a (cytohesin-4-like [Source:NCBI gene;Acc:103032106])

HSP 1 Score: 48.521 bits (114), Expect = 3.615e-6
Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 3 
Query:  198 DKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQI 398
            D+ G+LLK+    K +++RR+F+L  +   YF+    +D EP G+I LE   V+  DDP ++F  ++
Sbjct:  276 DREGWLLKEGGRVK-TWKRRWFILTDSCLYYFQY--TTDKEPKGIIPLENLSVKEVDDPHKQFCLEL 339
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Sea Lamprey
Match: PHETA1 (PH domain containing endocytic trafficking adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26509])

HSP 1 Score: 91.2781 bits (225), Expect = 2.244e-22
Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 3 
Query:  153 FNFKTLNFLIN-NSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQ 542
             N + L +  N +S  D+ GYL KK  E   SYQRR+FVL GNL  YFE     D EPLGV++LE  +VE+ D    +FAF ++    +    + Y  A+  + ELK W RAL TA   Y      EL  Q
Sbjct:    3 LNKRCLTYYANCDSPVDRQGYLRKKG-EVHTSYQRRWFVLKGNLLFYFEA--QGDREPLGVVVLEGCMVELCDAASTDFAFALRF---EGAGSRTYTLAAGDQDELKAWVRALTTANHGYMRTLASELEQQ 127
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Sea Lamprey
Match: si:dkey-283b15.4 (cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502])

HSP 1 Score: 51.6026 bits (122), Expect = 6.107e-8
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 3 
Query:  198 DKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQI 398
            D+ G+LLK      K+++RR+F+L  N   YFE    +D EP G+I LE   +   DDPK+  +F++
Sbjct:  269 DREGWLLKLVGGKVKTWKRRWFILTDNCLYYFEY--TTDKEPRGIIPLENLSIREVDDPKKPNSFEL 333
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Nematostella
Match: EDO39872 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8R7])

HSP 1 Score: 74.7146 bits (182), Expect = 5.916e-17
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 3 
Query:  174 FLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEEL 533
            F I+NS  DK GYL KK  E  + YQRR+FVL GNL  YFE+    D +P+GVI+LE   VE+  +  + +AFQI          + Y+  +++  +++ W + L  A  +Y +M  + L
Sbjct:   11 FAISNSSTDKEGYLNKKG-ELNRGYQRRWFVLKGNLLYYFERRL--DKDPIGVIILENCNVEL-AESGEPYAFQINFA---GAGARVYVLGADTPEDMEAWMKVLTIATYEYMQMMVQSL 123
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Nematostella
Match: EDO33225 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSW6])

HSP 1 Score: 54.6842 bits (130), Expect = 3.975e-9
Identity = 38/104 (36.54%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  207 GYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEK---YVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDY 509
            GYL K+S    K ++ RYFVL  N  IYF+K       PLG +  +    Y+ EI  D K+++  +I          KNY     SE E   W  A+LTA S Y
Sbjct:   14 GYLFKQSRHVWKLWKARYFVLQKNGLIYFKKKSDCAGRPLGAVTFKDISLYIDEI-GDKKRKYCLKI------HADGKNYFLCCFSEDERNAWLSAILTAISSY 110
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BLAST of Sesquipedalian-1 vs. Ensembl Medaka
Match: ENSORLT00000007213.2 (sesquipedalian-1 [Source:NCBI gene;Acc:101169568])

HSP 1 Score: 77.411 bits (189), Expect = 7.065e-16
Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 3 
Query:  129 IHNSQMRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIK 548
             HN  M+I       F   +S  DK GYL KK  E K SYQ+R+FVL GNL  Y E+   +D +  GVI+LE   V++ +  +++FAF +   +  E  ++ Y FA+E +   + W +ALL+A   Y  +  +++ N+ K
Sbjct:  107 THNVAMKIDEKALGYFQSCDSPVDKEGYLYKKG-EIKTSYQKRWFVLKGNLLFYKER--SADRDVSGVIVLEGCTVQLCES-EEQFAFSL---VWSEPGLRTYKFAAEDQASQESWIKALLSANHSYLALLVQDMENKYK 239
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BLAST of Sesquipedalian-1 vs. Ensembl Medaka
Match: zgc:153733 (sesquipedalian-1-like [Source:NCBI gene;Acc:101168291])

HSP 1 Score: 67.0106 bits (162), Expect = 9.555e-13
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEM 518
            M++      ++L   S  DK GYL KK   T  ++QRR+FVL  NL  Y E+   +D   LGVI+LE   V   +  ++ FAF +  G      +K Y FA+ES    + W  AL++A   Y  +
Sbjct:    1 MKVHEKILTHYLSCTSPVDKEGYLYKKKVRTA-TFQRRWFVLKANLLFYQER--PADRHLLGVIVLEGCAVRCLEA-EEPFAFSLVFG----PGLKTYTFAAESRQTQESWVEALMSASHCYLSL 117
[Close]
BLAST of Sesquipedalian-1 vs. Ensembl Medaka
Match: ENSORLT00000032174.1 (cytohesin-3 [Source:NCBI gene;Acc:101174779])

HSP 1 Score: 47.7506 bits (112), Expect = 5.804e-6
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 3 
Query:  198 DKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQI 398
            D+ G+LLK      K+++RR+F+L  N   YFE    +D EP G+I LE   +   ++P++   F++
Sbjct:  261 DREGWLLKLGGGRVKTWKRRWFILTDNCLYYFEY--TTDKEPRGIIPLENLSIREVEEPRKPNCFEL 325
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BLAST of Sesquipedalian-1 vs. Planmine SMEST
Match: SMESG000053122.1 (SMESG000053122.1)

HSP 1 Score: 396.741 bits (1018), Expect = 9.099e-142
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAKIFNREYNPFNDSETERIDPNLRSLFLMTFDEMHSEAREHFLKLD 731
            MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLP SDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAKIFNREYNPFNDSETERIDPNLRSLFLMTFDEMHSEAREHFLKLD
Sbjct:    1 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYFEKLPTSDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAKIFNREYNPFNDSETERIDPNLRSLFLMTFDEMHSEAREHFLKLD 196
[Close]
BLAST of Sesquipedalian-1 vs. Planmine SMEST
Match: SMESG000053127.1 (SMESG000053127.1)

HSP 1 Score: 188.348 bits (477), Expect = 1.264e-59
Identity = 93/195 (47.69%), Postives = 134/195 (68.72%), Query Frame = 3 
Query:  144 MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKS-YQRRYFVLIGNLFIYFEK--LPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIFASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKTAKIFNREYNPFNDSETERIDPNLRSLFLMTFDEMHSEAREHF 719
            M+I N KT+  +++ SK DKCGYLLKK SE KKS ++RRYFVLIGN+  Y+E+   PI+D +P G+I+LE +VVE+  D KQ + FQI  G   +K +K YI A++SE +LKDW + L+TAGS+YF++K +E  +QI+A++E+I+CQF      +I + +Y   N   +   DP  ++L  MTFDEMH  A  +F
Sbjct:    1 MKILNEKTIGLILSQSKPDKCGYLLKKGSEYKKSIFKRRYFVLIGNMLAYYERKPYPIADYDPCGIIILEGHVVEMISDSKQNYVFQISFGFPSDKSLKIYILAADSESDLKDWIQVLITAGSEYFKIKEQEYTDQIRAIKEVISCQFDSGSFKRI-SIDYQSNNHLLSSLNDPYYKTLLSMTFDEMHQSALMYF 194
The following BLAST results are available for this feature:
BLAST of Sesquipedalian-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PHETA15.007e-1733.82PH domain containing endocytic trafficking adaptor... [more]
PHETA16.741e-1733.82PH domain containing endocytic trafficking adaptor... [more]
PHETA16.741e-1733.82PH domain containing endocytic trafficking adaptor... [more]
PHETA11.268e-1535.29PH domain containing endocytic trafficking adaptor... [more]
PHETA22.859e-927.27PH domain containing endocytic trafficking adaptor... [more]
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BLAST of Sesquipedalian-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Sesquipedalian-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
IPIP2.376e-1430.12gene:FBgn0031768 transcript:FBtr0079183[more]
IPIP2.376e-1430.12gene:FBgn0031768 transcript:FBtr0079184[more]
IPIP2.376e-1430.12gene:FBgn0031768 transcript:FBtr0343120[more]
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BLAST of Sesquipedalian-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
si:ch211-193c2.21.483e-1934.21si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-... [more]
si:ch211-193c2.21.483e-1934.21si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-... [more]
si:ch211-193c2.21.483e-1934.21si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-... [more]
zgc:1537331.986e-833.60zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273][more]
zgc:1537331.986e-833.60zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273][more]
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BLAST of Sesquipedalian-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lactb22.749e-1732.86lactamase beta 2 [Source:Xenbase;Acc:XB-GENE-95471... [more]
ENSXETT00000033445.14.084e-1734.35PH domain containing endocytic trafficking adaptor... [more]
ENSXETT00000024362.11.231e-1536.51pep primary_assembly:Xenopus_tropicalis_v9.1:9:790... [more]
ENSXETT00000037890.11.267e-1336.72pep primary_assembly:Xenopus_tropicalis_v9.1:1:154... [more]
sf3b41.214e-640.00splicing factor 3b subunit 4 [Source:Xenbase;Acc:X... [more]
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BLAST of Sesquipedalian-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pheta12.694e-1835.77PH domain containing endocytic trafficking adaptor... [more]
Pheta12.694e-1835.77PH domain containing endocytic trafficking adaptor... [more]
Pheta16.765e-1336.45PH domain containing endocytic trafficking adaptor... [more]
Pheta25.068e-1129.05PH domain containing endocytic trafficking adaptor... [more]
Pheta25.068e-1129.05PH domain containing endocytic trafficking adaptor... [more]
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BLAST of Sesquipedalian-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|D3ZL52|SESQ1_RAT3.113e-1836.50Sesquipedalian-1 OS=Rattus norvegicus OX=10116 GN=... [more]
sp|Q8BH49|SESQ1_MOUSE1.884e-1735.77Sesquipedalian-1 OS=Mus musculus OX=10090 GN=Pheta... [more]
sp|Q8N4B1|SESQ1_HUMAN3.237e-1633.82Sesquipedalian-1 OS=Homo sapiens OX=9606 GN=PHETA1... [more]
sp|Q14B98|SESQ2_MOUSE3.614e-1029.05Sesquipedalian-2 OS=Mus musculus OX=10090 GN=Pheta... [more]
sp|Q6ICB4|SESQ2_HUMAN1.373e-827.27Sesquipedalian-2 OS=Homo sapiens OX=9606 GN=PHETA2... [more]
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BLAST of Sesquipedalian-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0R3SZA13.344e-2233.65PH domain-containing protein OS=Hymenolepis diminu... [more]
A0A564YUP86.141e-2233.65PH domain-containing protein OS=Hymenolepis diminu... [more]
A0A0R3TWJ08.167e-2236.36PH domain-containing protein OS=Rodentolepis nana ... [more]
A0A3P7KUY91.852e-2132.37PH domain-containing protein OS=Dibothriocephalus ... [more]
A0A154NYR81.878e-2131.12Sesquipedalian-1 OS=Dufourea novaeangliae OX=17803... [more]
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BLAST of Sesquipedalian-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
zgc:1537331.069e-1137.60sesquipedalian-1-like [Source:NCBI gene;Acc:103044... [more]
ENSAMXT00000033245.12.287e-930.83sesquipedalian-1-like [Source:NCBI gene;Acc:103046... [more]
si:ch211-193c2.28.639e-840.30si:ch211-193c2.2 [Source:ZFIN;Acc:ZDB-GENE-041210-... [more]
ENSAMXT00000010738.25.906e-730.48sesquipedalian-1-like [Source:NCBI gene;Acc:103046... [more]
cyth4a3.615e-635.82cytohesin-4-like [Source:NCBI gene;Acc:103032106][more]
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BLAST of Sesquipedalian-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
PHETA12.244e-2241.22PH domain containing endocytic trafficking adaptor... [more]
si:dkey-283b15.46.107e-838.81cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502][more]
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BLAST of Sesquipedalian-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Sesquipedalian-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO398725.916e-1737.50Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO332253.975e-936.54Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Sesquipedalian-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSORLT00000007213.27.065e-1635.71sesquipedalian-1 [Source:NCBI gene;Acc:101169568][more]
zgc:1537339.555e-1335.20sesquipedalian-1-like [Source:NCBI gene;Acc:101168... [more]
ENSORLT00000032174.15.804e-634.33cytohesin-3 [Source:NCBI gene;Acc:101174779][more]
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BLAST of Sesquipedalian-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000053122.19.099e-14299.49SMESG000053122.1[more]
SMESG000053127.11.264e-5947.69SMESG000053127.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024040 ID=SMED30024040|Name=Sesquipedalian-1|organism=Schmidtea mediterranea sexual|type=transcript|length=816bp
CGTTATTGTACTTACATAATTTGTTATTAGTATAATATTTTTCTGTGTAA
ATTTAAAGAATATTTGCAATGAATGCGTTTAGAAAAATTGATAGGCATTA
AAAATTAATTTAAAAGATTTTTTCATATATTCATAATAGTCAAATGAGAA
TATTTAATTTTAAAACTTTAAACTTCTTAATTAACAATTCTAAAGCAGAT
AAATGTGGTTATCTATTAAAAAAAAGCTCCGAAACTAAGAAGTCGTATCA
AAGGCGATATTTTGTATTAATTGGGAATTTGTTTATCTACTTCGAAAAAC
TCCCTATTTCTGATACCGAGCCGCTGGGCGTGATTTTATTGGAAAAATAT
GTCGTTGAAATTTTTGATGATCCCAAACAAGAATTTGCATTTCAAATCAA
ATTAGGATTAGAAGATGAAAAGCCAGTTAAAAATTACATTTTTGCGTCAG
AATCTGAAGGAGAGCTAAAAGATTGGTTTCGAGCTCTGCTGACTGCAGGT
TCGGATTATTTTGAAATGAAAGGAGAAGAATTACTCAACCAGATCAAAGC
GCTGCAAGAAATAATTGCATGCCAATTCAAAAAAGATAAAACAGCAAAGA
TATTTAATAGAGAATATAATCCATTTAATGACTCAGAAACAGAAAGAATA
GATCCAAACCTTCGAAGTTTATTTCTGATGACATTCGATGAAATGCACTC
CGAGGCTAGGGAACACTTTCTGAAACTCGATTGAAAGCCAAAATCCTCAG
TTTGTTTGTTCTTTGTTTTCGCTTGCAATTTTTATATTTATTTGATAAAT
ATAATGTTATCGCTTT
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protein sequence of SMED30024040-orf-1

>SMED30024040-orf-1 ID=SMED30024040-orf-1|Name=SMED30024040-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=197bp
MRIFNFKTLNFLINNSKADKCGYLLKKSSETKKSYQRRYFVLIGNLFIYF
EKLPISDTEPLGVILLEKYVVEIFDDPKQEFAFQIKLGLEDEKPVKNYIF
ASESEGELKDWFRALLTAGSDYFEMKGEELLNQIKALQEIIACQFKKDKT
AKIFNREYNPFNDSETERIDPNLRSLFLMTFDEMHSEAREHFLKLD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 18..122
e-value: 3.0E-16
score: 70.0
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 19..116
e-value: 9.6E-16
score: 58.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 17..120
score: 15.549
IPR011993PH-like domain superfamilyGENE3DG3DSA:2.30.29.30coord: 7..126
e-value: 9.1E-21
score: 75.6
NoneNo IPR availablePANTHERPTHR22902PH DOMAIN-CONTAININGcoord: 21..145
NoneNo IPR availableSUPERFAMILYSSF50729PH domain-likecoord: 16..115