Vacuolar-sorting protein SNF8

Overview
NameVacuolar-sorting protein SNF8
Smed IDSMED30023915
Length (bp)854
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Vacuolar-sorting protein SNF8 (SMED30023915) t-SNE clustered cells

Violin plots show distribution of expression levels for Vacuolar-sorting protein SNF8 (SMED30023915) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Vacuolar-sorting protein SNF8 (SMED30023915) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Vacuolar-sorting protein SNF8 (SMED30023915) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30023915

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30023915SMESG000016990.1 Contig1765GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30023915SMESG000016990.1 Contig1765GPL15192PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30023915SMESG000016990.1 Contig1765GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Match: SNF8 (SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028])

HSP 1 Score: 242.276 bits (617), Expect = 2.614e-79
Identity = 122/242 (50.41%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A ++NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA-EKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Match: SNF8 (SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028])

HSP 1 Score: 241.506 bits (615), Expect = 4.362e-79
Identity = 122/242 (50.41%), Postives = 167/242 (69.01%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A  +NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA--ENGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 240
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Match: SNF8 (SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028])

HSP 1 Score: 155.992 bits (393), Expect = 8.530e-47
Identity = 78/157 (49.68%), Postives = 109/157 (69.43%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKM--EIETICKDDVIRSIKSIKILGN 528
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   ++  + +   I +  ++++LG+
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQLERSGTISAHCNLRLLGS 159
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Match: SNF8 (SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028])

HSP 1 Score: 153.68 bits (387), Expect = 2.399e-46
Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSK 459
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGK 134
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Match: SNF8 (SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028])

HSP 1 Score: 93.2041 bits (230), Expect = 2.396e-23
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLAS 303
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLAS 82
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Celegans
Match: vps-22 (Vacuolar-sorting protein SNF8 [Source:UniProtKB/TrEMBL;Acc:Q18258])

HSP 1 Score: 235.343 bits (599), Expect = 6.471e-77
Identity = 111/241 (46.06%), Postives = 168/241 (69.71%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRS--YWVPGLF 780
            RR +G+AAI+ K+  A ++ +KG+++A        +Q E     LE FA +H++EI+KN +FR  FQ MC+S+GVDPLASSKGFWA+ LG GDFYY + I+++EI ++T+  NGG+M ++E+  +L +TRS+   +TI  DD++R++  +K+LGNGF L+ L  GR LVQSVPGEL+MD + +L+ A+D    +   L  +KL W+E R+  A+E+L+KEG+AW D+ +  +  YW P LF
Sbjct:    4 RRRIGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQLSAGLEMFAQRHRDEIKKNSQFRRHFQEMCASVGVDPLASSKGFWAKALGFGDFYYELGIQIVEICLSTTHINGGIMTVEEIRNRLMRTRSRTRKDTISTDDILRAVDKLKVLGNGFELVPLGGGRFLVQSVPGELSMDHSRVLQLAED-AAYVTKELIIDKLRWDEARASSALEHLVKEGLAWTDEQASDTTQYWFPSLF 243
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Fly
Match: lsn (gene:FBgn0260940 transcript:FBtr0084135)

HSP 1 Score: 219.55 bits (558), Expect = 7.695e-71
Identity = 107/244 (43.85%), Postives = 168/244 (68.85%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEI-ETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQD-QNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLF 780
            MRR VG+ AI+ ++ AA +YK KG ++ E     + KQ E F++ LEEFA+KHK +IRKN +FR QFQ MC++IGVDPLA+ KGFW+ +LG+GDFYY + ++V+E+ +A +   GGLM+LD+L  +L   R +  + + I K+D++ + K + I GNGF +  L +G+ +VQS+PGEL+M++TN+L  A + + G +  +   + L W + R+QQ+++ ++ EG+ WID  +G   +YW P LF
Sbjct:    1 MRRRVGLGAIQQQKLAAEKYKDKGTDLQENQLEQMTKQMEVFRVKLEEFAMKHKEDIRKNSQFRKQFQEMCAAIGVDPLATGKGFWS-VLGMGDFYYELGVQVVEVCLAANHKTGGLMELDDLRRRLIAARGQSSVHQEITKEDILMAAKKLSIFGNGFVVHKLGKGKYIVQSIPGELSMEETNILNAASNTEQGCVTQSQLIKDLGWTDYRAQQSLDKVLGEGLCWIDKQAGDEPAYWFPSLF 243
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Zebrafish
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:492771])

HSP 1 Score: 240.35 bits (612), Expect = 8.507e-79
Identity = 118/242 (48.76%), Postives = 169/242 (69.83%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            RR VG  AI  K+ A A+YK +G+ +AE   + + KQ ++FK HLEEFA KHK EIRK+ +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +GNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + ++   E L W +ER+   +++L+KEG+AW+D  +     YW+P LF+
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGSVLAEDQIAQMSKQLDTFKTHLEEFASKHKQEIRKSSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHHRVLKGRGKF-AQDVSQDDLVRAIKKLKAMGNGFGMIPVG-GTYLVQSVPAELNMDHTVVLQLA-EKKGYVTVSEIRESLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALFS 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Xenopus
Match: atp7b (ATPase, Cu++ transporting, beta polypeptide [Source:Xenbase;Acc:XB-GENE-6044681])

HSP 1 Score: 244.588 bits (623), Expect = 2.210e-80
Identity = 124/242 (51.24%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYS-GRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE     + KQ E FK +LEEFA KHK EIRKNP+FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A   +NGGL+ L EL   + K R K+  + + +DD+IR+IK +K+LGNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + +      LNW  ER++  +E+L+KEG+AWID  + G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLITLAELHQHVLKGRGKLA-QDVSQDDIIRAIKKLKVLGNGFGIIPVG-GSYLVQSVPAELNMDHTVVLQLA-EKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWIDSQAQGEAQYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Xenopus
Match: atp7b (ATPase, Cu++ transporting, beta polypeptide [Source:Xenbase;Acc:XB-GENE-6044681])

HSP 1 Score: 244.588 bits (623), Expect = 2.840e-80
Identity = 123/242 (50.83%), Postives = 166/242 (68.60%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE     + KQ E FK +LEEFA KHK EIRKNP+FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A   +NGGL+ L EL   + K R K+  + + +DD+IR+IK +K+LGNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + +      LNW  ER++  +E+L+KEG+AWID  +     YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLITLAELHQHVLKGRGKL-AQDVSQDDIIRAIKKLKVLGNGFGIIPVG-GSYLVQSVPAELNMDHTVVLQLA-EKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWIDSQAQGEAQYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Xenopus
Match: cxcr6 (chemokine (C-X-C motif) receptor 6 [Source:Xenbase;Acc:XB-GENE-964706])

HSP 1 Score: 87.4261 bits (215), Expect = 2.109e-21
Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLA 300
            RR VG  AI  K+ A A+YK +G  +AE     + KQ E FK +LEEFA KHK EIRKNP+FR QFQ MC++IGVDPLA
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNPQFRVQFQDMCATIGVDPLA 81
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Mouse
Match: Snf8 (SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1343161])

HSP 1 Score: 242.276 bits (617), Expect = 1.854e-79
Identity = 122/242 (50.41%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A ++NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA-EKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Mouse
Match: Snf8 (SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1343161])

HSP 1 Score: 215.698 bits (548), Expect = 2.004e-69
Identity = 115/242 (47.52%), Postives = 154/242 (63.64%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A+                          E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLAE--------------------------EHLLKEGLAWLDLQAPGEAHYWLPALFT 216
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Match: sp|Q5RJU0|SNF8_XENTR (Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis OX=8364 GN=snf8 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.171e-79
Identity = 124/242 (51.24%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYS-GRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE     + KQ E FK +LEEFA KHK EIRKNP+FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A   +NGGL+ L EL   + K R K+  + + +DD+IR+IK +K+LGNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + +      LNW  ER++  +E+L+KEG+AWID  + G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLITLAELHQHVLKGRGKLA-QDVSQDDIIRAIKKLKVLGNGFGIIPVG-GSYLVQSVPAELNMDHTVVLQLA-EKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWIDSQAQGEAQYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Match: sp|Q96H20|SNF8_HUMAN (Vacuolar-sorting protein SNF8 OS=Homo sapiens OX=9606 GN=SNF8 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.255e-78
Identity = 122/242 (50.41%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A ++NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA-EKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Match: sp|Q5RK19|SNF8_RAT (Vacuolar-sorting protein SNF8 OS=Rattus norvegicus OX=10116 GN=Snf8 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.283e-78
Identity = 122/242 (50.41%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A ++NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA-EKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Match: sp|Q9CZ28|SNF8_MOUSE (Vacuolar-sorting protein SNF8 OS=Mus musculus OX=10090 GN=Snf8 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.297e-78
Identity = 122/242 (50.41%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID-DYSGRS-YWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE   + + KQ + FK +LEEFA KHK EIRKNPEFR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ L+EL  ++ K R K   + + +DD+IR+IK +K LG GF +I +  G  L+QSVP ELNMD T +L+ A ++NG + ++     L W  ER++Q +E+L+KEG+AW+D    G + YW+P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKF-AQDVSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLA-EKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Match: sp|Q5U3V9|SNF8_DANRE (Vacuolar-sorting protein SNF8 OS=Danio rerio OX=7955 GN=snf8 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 6.422e-78
Identity = 118/242 (48.76%), Postives = 169/242 (69.83%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            RR VG  AI  K+ A A+YK +G+ +AE   + + KQ ++FK HLEEFA KHK EIRK+ +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +GNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + ++   E L W +ER+   +++L+KEG+AW+D  +     YW+P LF+
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGSVLAEDQIAQMSKQLDTFKTHLEEFASKHKQEIRKSSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHHRVLKGRGKF-AQDVSQDDLVRAIKKLKAMGNGFGMIPVG-GTYLVQSVPAELNMDHTVVLQLA-EKKGYVTVSEIRESLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALFS 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Match: A0A1S3IXU7 (Vacuolar-sorting protein SNF8 OS=Lingula unguis OX=7574 GN=LOC106168491 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 5.074e-87
Identity = 131/242 (54.13%), Postives = 184/242 (76.03%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            RR +G+ AIKNK  A AR+K KG+E+AE   + + KQ + F+ HLE+FA KHK++IRK+P+FR  FQ MC++IGVDPLAS KGFWAEMLGVGDFYY + ++++E+ +ATS  NGGLMDL+EL  KL  TR K + E I  DD++R+IK +K+LGNGF++I +  GR LVQSVPGEL+MD T +L+ A+D  G + +++  ++L W EERS +AV+Y++KEG+AW+DD +   + +W P LF+
Sbjct:    3 RRGIGMGAIKNKNLAQARFKDKGSELAEDQLNQMSKQLDVFRTHLEDFAAKHKDDIRKDPQFRKHFQEMCATIGVDPLASGKGFWAEMLGVGDFYYELGVQIVEVCLATSHRNGGLMDLEELRQKLLSTRGKRKQE-ISIDDLMRAIKKLKVLGNGFTVIPVG-GRYLVQSVPGELSMDHTAVLQLAED-TGYVSMSMIRDRLKWGEERSHRAVDYMLKEGLAWVDDQAPQEKHFWFPALFS 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Match: A0A068XY72 (Vacuolar-sorting protein SNF8 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000441300 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.116e-85
Identity = 127/243 (52.26%), Postives = 176/243 (72.43%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID--DYSGRSYWVPGLFN 783
            M R  GIA IK +     RY+ K  ++AE   ++L +Q E+ K  LE FA K+++ IR++  FR++FQSMC++IGVDPLASS G+W+++LG+GDFYYH+A+R+IEI MA  +   GLM L+EL+ +LNKT+S  E + IC+DDVIR+IK ++ LGNGF LI +S  RQLVQSVPGEL+MDQT +LK A+     I++  C +KL W  ER+  A+EYL++EG+AW+D  D +GRSYW P L  
Sbjct:    1 MHRRSGIAGIKERAQMQIRYEEKRKQMAEDAAANLHRQLETVKSSLEYFASKYQSRIRQDHAFRTEFQSMCANIGVDPLASSDGYWSKILGIGDFYYHLAVRIIEICMANQRKTAGLMPLEELILELNKTKSSHESD-ICQDDVIRAIKKLQCLGNGFKLIRISDSRQLVQSVPGELSMDQTEVLKLAESHAAHINVQQCVKKLGWTHERAHAALEYLMQEGMAWVDESDNTGRSYWFPSLLT 242
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Match: U6J9J8 (Vacuolar-sorting protein SNF8 OS=Echinococcus granulosus OX=6210 GN=EGR_02396 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.286e-85
Identity = 127/243 (52.26%), Postives = 176/243 (72.43%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWID--DYSGRSYWVPGLFN 783
            M R  GIA IK +     RY+ K  ++AE   ++L +Q E+ K  LE FA K+++ IR++  FR++FQSMC++IGVDPLASS G+W+++LG+GDFYYH+A+R+IEI MA  +   GLM L+EL+ +LNKT+S  E + IC+DDVIR+IK ++ LGNGF LI +S  RQLVQSVPGEL+MDQT +LK A+     I++  C +KL W  ER+  A+EYL++EG+AW+D  D +GRSYW P L  
Sbjct:    1 MYRRAGIAGIKERAQMQIRYEEKRKQMAEDAAANLHRQLETVKSSLEYFASKYQSRIRQDHAFRTEFQSMCANIGVDPLASSDGYWSKILGIGDFYYHLAVRIIEICMANQRKTAGLMPLEELILELNKTKSSHESD-ICQDDVIRAIKKLQCLGNGFKLIRISDSRQLVQSVPGELSMDQTEVLKLAESHAAHINVQQCVKKLGWTHERAHAALEYLMQEGMAWVDESDNTGRSYWFPSLLT 242
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Match: A0A0R3UKS2 (Vacuolar-sorting protein SNF8 OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS8221 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.252e-84
Identity = 125/244 (51.23%), Postives = 179/244 (73.36%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYS---GRSYWVPGLFN 783
            M R VGIA IK+K    ARY+ K  +IA+   +   +Q E+ K  LE FA K++N+IR++P FR++FQSMC++IGVDPLASS G+W+++LG+GDFYYH+ +R+IEI MA  +  GGLM L++LV++LN+T+S    + +C+DD +R+IK +  LGNGF++I LS  RQLVQSVPGELNMDQT +LK A+     + +  C +KL+W  ER+Q A+++L+KEG+AW+D+ S    R+YW P LF 
Sbjct:    2 MNRRVGIAGIKDKALMQARYEEKRRQIADNAAADFRRQLETVKSSLEYFASKYQNKIRQDPVFRTEFQSMCANIGVDPLASSNGYWSKILGIGDFYYHLGVRIIEICMANQRQTGGLMPLEDLVSELNRTKSSHGAD-VCQDDAVRAIKKLHCLGNGFTIIRLSDSRQLVQSVPGELNMDQTKVLKLAESHAAHVAVGYCVQKLDWIHERAQAALDHLLKEGMAWVDEASESGERTYWFPSLFT 244
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Match: K1P959 (Vacuolar-sorting protein SNF8 OS=Crassostrea gigas OX=29159 GN=CGI_10006279 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 6.079e-84
Identity = 131/242 (54.13%), Postives = 180/242 (74.38%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYS--GRSYWVPGLF 780
            MRR VGIAA KNK  A ARYK KGNE+ +   + + KQ E+FK++LEEFA KHK++IRK+PEFR  FQ MC+SIGVDPLASSKGFWAEMLGVGDFYY + ++++E+ MAT+  NGGL+ ++EL  K+  +R K + + I  DD++R+IK +K+LGNGF++I L +   +VQSVPGEL MD T LL+ AQ++ G +      + L W EER+ +A++Y+++EG+AW+DD +  GR YW P  F
Sbjct:    1 MRRGVGIAAAKNKSLAQARYKDKGNELEQNQMAQMAKQMETFKVNLEEFAAKHKDDIRKDPEFRVSFQEMCASIGVDPLASSKGFWAEMLGVGDFYYELGVQIVEVCMATNHRNGGLIGIEELRDKVMASRGK-KSQAISIDDLLRAIKKLKVLGNGFTVIPLGKS-YMVQSVPGELTMDHTKLLQEAQNE-GFVSKKSLMDSLKWEEERATRALDYMVREGLAWVDDQATGGRQYWFPSFF 239
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Cavefish
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:103025858])

HSP 1 Score: 238.424 bits (607), Expect = 3.492e-78
Identity = 118/242 (48.76%), Postives = 167/242 (69.01%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            RR VG  AI  K+ A A+YK +G  +AE     + KQ E+FK HLEEFA KHK EIRK+ +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +GNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + ++   + L W +ER+   +++L+KEG+AW+D  +     YW+P LF+
Sbjct:    3 RRGVGAGAIAKKKLAEAKYKERGTVLAEDQIIQMSKQLETFKTHLEEFASKHKQEIRKSSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHQRVLKGRGKF-AQDVSQDDLVRAIKKLKAMGNGFGMIPVG-GSYLVQSVPAELNMDHTVVLQLA-EKKGYVTVSEIRDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALFS 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Cavefish
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:103025858])

HSP 1 Score: 198.364 bits (503), Expect = 6.304e-63
Identity = 97/204 (47.55%), Postives = 133/204 (65.20%), Query Frame = 1 
Query:  178 ESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            ++FK HLEEFA KHK EIRK+ +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +GNGF +I +  G  LVQSVP ELNMD T +L+ A+D                          +L+KEG+AW+D  +     YW+P LF+
Sbjct:   29 KTFKTHLEEFASKHKQEIRKSSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHQRVLKGRGKF-AQDVSQDDLVRAIKKLKAMGNGFGMIPVG-GSYLVQSVPAELNMDHTVVLQLAED--------------------------HLLKEGLAWLDSQAAGEPQYWLPALFS 204
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Sea Lamprey
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:492771])

HSP 1 Score: 247.669 bits (631), Expect = 2.109e-82
Identity = 123/242 (50.83%), Postives = 168/242 (69.42%), Query Frame = 1 
Query:   64 RRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYS--GRSYWVPGLFN 783
            RR VG  AI  K+ A ARYK +GN +AE   S + KQ E+F+ +LEEFA KHK EIR+NP+FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + ++++E+ +A    NGGLM L+EL  ++ K+R K   E + +DD+IR+IK +K+LGNGF +I +  G  LVQSVP ELNMD T +L+ A ++ G + +   +  L W  ER+   + +L++EG+AWID  +  G  YW P LF 
Sbjct:    3 RRGVGAGAIAKKKLAEARYKERGNVMAEDQLSQMSKQLETFRTNLEEFASKHKQEIRRNPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALRHRNGGLMMLEELHNRVLKSRGKYGQE-LSQDDLIRAIKKLKVLGNGFCMIPMG-GTYLVQSVPAELNMDHTTVLQIA-EKKGYVSVEEITSSLKWETERTNHVLAHLLREGLAWIDQQALGGAQYWFPALFT 241
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Yeast
Match: SNF8 (Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression [Source:SGD;Acc:S000005923])

HSP 1 Score: 120.168 bits (300), Expect = 2.238e-33
Identity = 81/226 (35.84%), Postives = 116/226 (51.33%), Query Frame = 1 
Query:  115 RYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDEL----VTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRS---YWVP 771
            +Y      I E     L  Q   F+  L EFA KH +E++ +PEFRS+F  MCSSIG+DPL+        +  V DFYY + ++VIEI   T   NGG++   EL      KLN          +  DD+ +SI  +K L   F +  + RG++ ++SVP EL  DQT +L+      G   I+L    L W   RS+ A++ ++  G+ WI DY G +   YW P
Sbjct:   16 KYNDVNKTILEKQSVELRDQLMVFQERLVEFAKKHNSELQASPEFRSKFMHMCSSIGIDPLSLFDRD-KHLFTVNDFYYEVCLKVIEICRQTKDMNGGVISFQELEKVHFRKLN----------VGLDDLEKSIDMLKSL-ECFEIFQI-RGKKFLRSVPNELTSDQTKILEICSIL-GYSSISLLKANLGWEAVRSKSALDEMVANGLLWI-DYQGGAEALYWDP 226
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Nematostella
Match: EDO49029 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHS4])

HSP 1 Score: 233.417 bits (594), Expect = 1.075e-76
Identity = 114/227 (50.22%), Postives = 158/227 (69.60%), Query Frame = 1 
Query:  115 RYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDEL---VTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLF 780
            +Y  KG EIA++  S + KQ +SFK +LE+FA KHK++I+KNPEFR  FQ MC+ IGVDPLASSKGFWAE+LGVGDFYY + ++++EI MA    NGGLM LD L   + K +K R     + + +DD+ R+IK +  LG+GF +I ++  R+LVQSVPGEL+MD T+ LK AQ + G   +      L W+EER+ +A+ +L+ E +AW+DD +G  R +W P LF
Sbjct:   20 KYAEKGTEIADIQLSQMGKQLDSFKNYLEDFASKHKSDIKKNPEFRGHFQKMCARIGVDPLASSKGFWAELLGVGDFYYELGVQIVEICMAMRPKNGGLMTLDSLHKAILKSSKAR-----QDVTEDDLERAIKKLHALGSGFQVI-VAGNRRLVQSVPGELSMDHTDALKLAQGK-GFTSVTALKRDLGWDEERACRALNHLVHEELAWVDDQAGTERHFWFPTLF 239
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Medaka
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:101156924])

HSP 1 Score: 237.269 bits (604), Expect = 1.253e-77
Identity = 118/243 (48.56%), Postives = 168/243 (69.14%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            MRR VG  AI  K+ A A+YK +G  +AE     + KQ E+FK +LEEFA KHK EIRKN +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +G+GF +I +  G  LVQSVP ELNMD T +L+ A ++ G + ++   + L W +ER+   +++L+KEG+AW+D  +     YW+P LF+
Sbjct:    1 MRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRKNSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHQRVLKGRGKY-AQDVSQDDLVRAIKKLKAMGSGFGMIPVG-GSYLVQSVPAELNMDHTVVLQLA-EKKGYVTVSEIKDGLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALFS 240
[Close]
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Medaka
Match: snf8 (SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:101156924])

HSP 1 Score: 206.453 bits (524), Expect = 3.486e-66
Identity = 103/223 (46.19%), Postives = 142/223 (63.68%), Query Frame = 1 
Query:  121 KSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSG--RSYWVPGLFN 783
            K +G  +AE     + KQ E+FK +LEEFA KHK EIRKN +FR QFQ MC++IGVDPLAS KGFW+EMLGVGDFYY + +++IE+ +A    NGGL+ LDEL  ++ K R K   + + +DD++R+IK +K +G+GF +I +  G  LVQSVP ELNMD T +L+ A+D                          +L+KEG+AW+D  +     YW+P LF+
Sbjct:    1 KERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRKNSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLDELHQRVLKGRGKY-AQDVSQDDLVRAIKKLKAMGSGFGMIPVG-GSYLVQSVPAELNMDHTVVLQLAED--------------------------HLLKEGLAWLDSQAAGEPQYWLPALFS 195
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BLAST of Vacuolar-sorting protein SNF8 vs. Planmine SMEST
Match: SMESG000016990.1 (SMESG000016990.1)

HSP 1 Score: 478.789 bits (1231), Expect = 2.218e-173
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 
Query:   61 MRRNVGXXXXXXXXXXXXRYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRSYWVPGLFNINK 792
            MRRNVGIAAIKNKEAAAARYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRSYWVPGLFNINK
Sbjct:    1 MRRNVGIAAIKNKEAAAARYKSKGNEIAELNFSSLVKQFESFKMHLEEFAVKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIAIRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKSIKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALCSEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRSYWVPGLFNINK 244
The following BLAST results are available for this feature:
BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SNF82.614e-7950.41SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:H... [more]
SNF84.362e-7950.41SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:H... [more]
SNF88.530e-4749.68SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:H... [more]
SNF82.399e-4656.82SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:H... [more]
SNF82.396e-2360.00SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:H... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
vps-226.471e-7746.06Vacuolar-sorting protein SNF8 [Source:UniProtKB/T... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
lsn7.695e-7143.85gene:FBgn0260940 transcript:FBtr0084135[more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
snf88.507e-7948.76SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:492... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
atp7b2.210e-8051.24ATPase, Cu++ transporting, beta polypeptide [Sourc... [more]
atp7b2.840e-8050.83ATPase, Cu++ transporting, beta polypeptide [Sourc... [more]
cxcr62.109e-2159.49chemokine (C-X-C motif) receptor 6 [Source:Xenbase... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Snf81.854e-7950.41SNF8, ESCRT-II complex subunit, homolog (S. cerevi... [more]
Snf82.004e-6947.52SNF8, ESCRT-II complex subunit, homolog (S. cerevi... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5RJU0|SNF8_XENTR1.171e-7951.24Vacuolar-sorting protein SNF8 OS=Xenopus tropicali... [more]
sp|Q96H20|SNF8_HUMAN1.255e-7850.41Vacuolar-sorting protein SNF8 OS=Homo sapiens OX=9... [more]
sp|Q5RK19|SNF8_RAT1.283e-7850.41Vacuolar-sorting protein SNF8 OS=Rattus norvegicus... [more]
sp|Q9CZ28|SNF8_MOUSE1.297e-7850.41Vacuolar-sorting protein SNF8 OS=Mus musculus OX=1... [more]
sp|Q5U3V9|SNF8_DANRE6.422e-7848.76Vacuolar-sorting protein SNF8 OS=Danio rerio OX=79... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S3IXU75.074e-8754.13Vacuolar-sorting protein SNF8 OS=Lingula unguis OX... [more]
A0A068XY725.116e-8552.26Vacuolar-sorting protein SNF8 OS=Echinococcus mult... [more]
U6J9J85.286e-8552.26Vacuolar-sorting protein SNF8 OS=Echinococcus gran... [more]
A0A0R3UKS21.252e-8451.23Vacuolar-sorting protein SNF8 OS=Mesocestoides cor... [more]
K1P9596.079e-8454.13Vacuolar-sorting protein SNF8 OS=Crassostrea gigas... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
snf83.492e-7848.76SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:103... [more]
snf86.304e-6347.55SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:103... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
snf82.109e-8250.83SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:492... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
SNF82.238e-3335.84Component of the ESCRT-II complex; ESCRT-II is inv... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO490291.075e-7650.22Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
snf81.253e-7748.56SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:101... [more]
snf83.486e-6646.19SNF8 subunit of ESCRT-II [Source:NCBI gene;Acc:101... [more]
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BLAST of Vacuolar-sorting protein SNF8 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000016990.12.218e-173100.00SMESG000016990.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30023915 ID=SMED30023915|Name=Vacuolar-sorting protein SNF8|organism=Schmidtea mediterranea sexual|type=transcript|length=854bp
TATTCAAAAAATATATTCCCTTATTGATATTAATTTTGTTACAACGTATT
ATACATATAAATGCGTAGAAATGTAGGTATAGCTGCTATAAAAAACAAAG
AAGCAGCAGCGGCAAGATACAAGAGTAAGGGCAATGAAATTGCAGAGTTA
AATTTTTCTAGCTTGGTTAAGCAGTTTGAATCTTTCAAAATGCATTTAGA
AGAATTTGCTGTCAAGCATAAGAACGAAATTAGAAAGAATCCAGAATTTC
GTTCTCAATTTCAATCCATGTGCTCATCCATAGGAGTTGATCCATTAGCG
TCAAGCAAAGGCTTTTGGGCAGAAATGCTAGGTGTTGGTGATTTTTATTA
CCATATAGCTATTCGGGTAATTGAAATTACTATGGCAACATCTAAATATA
ACGGTGGATTGATGGATCTTGACGAATTAGTAACAAAGTTGAATAAAACC
CGCAGTAAAATGGAAATAGAAACGATTTGTAAAGATGATGTTATCAGATC
TATTAAATCCATTAAAATTCTTGGAAATGGATTTTCTTTAATCACATTAT
CTCGAGGTCGACAATTGGTTCAATCAGTGCCTGGTGAATTGAATATGGAT
CAGACTAATTTGTTGAAATTTGCTCAAGATCAAAATGGCCGAATAGATAT
TGCTTTGTGTTCAGAAAAGCTTAATTGGAACGAAGAAAGATCACAACAAG
CAGTTGAATATTTAATTAAAGAAGGAATCGCATGGATTGATGATTATAGC
GGGCGTTCATACTGGGTCCCAGGGTTGTTTAATATTAATAAATGAGATTC
TTTCTTTTCTATTAAAAAATAATGAATATAATTTAATTGTAATGAATCAG
TCAC
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protein sequence of SMED30023915-orf-1

>SMED30023915-orf-1 ID=SMED30023915-orf-1|Name=SMED30023915-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=245bp
MRRNVGIAAIKNKEAAAARYKSKGNEIAELNFSSLVKQFESFKMHLEEFA
VKHKNEIRKNPEFRSQFQSMCSSIGVDPLASSKGFWAEMLGVGDFYYHIA
IRVIEITMATSKYNGGLMDLDELVTKLNKTRSKMEIETICKDDVIRSIKS
IKILGNGFSLITLSRGRQLVQSVPGELNMDQTNLLKFAQDQNGRIDIALC
SEKLNWNEERSQQAVEYLIKEGIAWIDDYSGRSYWVPGLFNINK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0071985multivesicular body sorting pathway
GO:0006810transport
GO:0015031protein transport
GO:0043328protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000043dorsal ventral margin of the whole animal
PLANA:0000070intestinal phagocyte
Vocabulary: INTERPRO
TermDefinition
IPR040608Snf8/Vps36
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
IPR016689ESCRT-2_cplx_Snf8
IPR011991WHTH_DNA-bd_dom
IPR007286EAP30
Vocabulary: cellular component
TermDefinition
GO:0000814ESCRT II complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016689ESCRT-2 complex, Snf8PIRSFPIRSF017215ESCRT2_Vps22coord: 1..244
e-value: 5.4E-88
score: 292.0
IPR016689ESCRT-2 complex, Snf8PANTHERPTHR12806EAP30 SUBUNIT OF ELL COMPLEXcoord: 1..241
IPR040608Snf8/Vps36 familyPFAMPF04157EAP30coord: 5..228
e-value: 1.7E-64
score: 217.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3DG3DSA:1.10.10.10coord: 174..244
e-value: 1.1E-20
score: 75.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3DG3DSA:1.10.10.10coord: 91..173
e-value: 7.6E-25
score: 88.5
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILYSSF46785"Winged helix" DNA-binding domaincoord: 23..176
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILYSSF46785"Winged helix" DNA-binding domaincoord: 177..240