Netrin 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Expression Details Netrin 1 ( netrin-like ) is expressed during Stage 2, Stage 3 and Stage 4 in the embryonic digestive system and embryonic pharynx Click to see image symbols and abbreviations
Anatomical Expression
PAGE et. al., 2020SMED30023593 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Netrin 1 vs. Ensembl Human
Match: NTN1 (netrin 1 [Source:HGNC Symbol;Acc:HGNC:8029]) HSP 1 Score: 301.982 bits (772), Expect = 2.966e-93 Identity = 185/606 (30.53%), Postives = 299/606 (49.34%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CN+ DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y + SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK +IN K++C K+ +++I + G W +F I V+ Q R+ + + S+W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K GKC + Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVY--KQGTSRIRRGD------QSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKK 603
BLAST of Netrin 1 vs. Ensembl Human
Match: NTN3 (netrin 3 [Source:HGNC Symbol;Acc:HGNC:8030]) HSP 1 Score: 252.292 bits (643), Expect = 8.392e-75 Identity = 163/578 (28.20%), Postives = 260/578 (44.98%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPV-YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS----SCD-FCQ--RKSKRINFKRFCSKETNFKVNIKSR-ESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSY----LVMANVKTTEFMGQTELILNQSDVIEDWKETW 1759 C+ G P+ C P L+N A + ASSTCG + C++ DP+ + S ++ CW SE + + P +V LT+ L K + F+++ C P + + K W+P +F+ C L + ++PA + +CF + G L+ F+ + G L + Q+W+ AT++R+ +LT G + R+ E V Y + ++D+ +GG+ C+GHASR + + C+C+H T G DC +C + D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + + AC+ C CH VG+ +G C+Q +G+C CK GVTG TC CAPG++Q+ S PC K S+ CD C+ R S RI+ K+FC K+ +V + +R E+RG W RF + V+ ++ R +++WV CGC G Y LI + ++ W++ W Sbjct: 30 CHDEGGAPRGCVPGLVNAALGREVLASSTCGRPATRA------------------CDASDPRRAHSPALLTSPGGTASPLCWRSESLPRA--PLNVTLTVPLGKAFELVFVSLRFCSAPPASVALLKSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEA-----LCFPAPLAQPDGSG-----LLAFSMQDSSPPGLDLDSSPVLQDWVTATDVRV--VLTRPSTAG-----DPRDMEAVVPYSYAATDLQVGGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGA-AGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAPCVKTPIPGPTEDSSPVQPQDCDSHCKPARGSYRISLKKFCKKDYAVQVAVGARGEARGAWTRFPVAVLAVFRSGEERARRGS--------SALWVPAGDAACGCPRLLPGRRYLLLGGGPGAAAGGAGGRGPGLIAARGSLVLPWRDAW 561
BLAST of Netrin 1 vs. Ensembl Human
Match: LAMC1 (laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]) HSP 1 Score: 211.46 bits (537), Expect = 4.038e-57 Identity = 140/435 (32.18%), Postives = 214/435 (49.20%), Query Frame = 2 Query: 65 LQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-------------KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 + C G P+ C P +N A + + A++TCG E C + + KSC C++ P L + + D + + T W S+ + YP+S+NLTL L K I+++ ++ P+ IYK E W P+QY++ C+ T+ + AL TD FSDI+ L GG+ + F+ +GR ++ S Q W+ AT+IR++ L +G+ + + + ++ Y++ SD +GG+ C+GHAS ++ D C C+H+T G DCEKC FND+PW AT + + C C+CN S +C FD ++ +G HG C +C DNT G C++C +FR + + AC C C VGSLS T CD G+C CKPGV G C C PG+ Sbjct: 37 MDECTDEGGRPQRCMPEFVNAAFNVTVVATNTCG-TPPEEYCVQT--GVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDE---FSDISPLT------------GGN------VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT--LNRLNTFGDEVFNDPKVLKS--YYYAISDFAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTG--HGGHCTNCQDNTDGAHCERCRENFFR-----LGNNEACSSCHCSPVGSLS-TQCDSY-GRCSCKPGVMGDKCDRCQPGF 434 HSP 2 Score: 68.9366 bits (167), Expect = 2.269e-11 Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 848 PLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEE-FNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSL-SGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 P G + ++ + + C T GK CE C + F D + +R +C+ C+C+++ D N R+ G C+ C NT G CD+C G+F P + CK C C+ G++ + C+ V+G+C C P VTG+ C C PG+ Sbjct: 774 PCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVR---LCRLCQCSDN-----IDPNAVGNCNRLTGE-CLKCIYNTAGFYCDRCKDGFFGNPLAP-NPADKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGF 923 HSP 3 Score: 61.6178 bits (148), Expect = 4.638e-9 Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPA-VCKRCECNNHSIKCVFDFNVFLKSGRIHGSSC------IDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 +C ++TAG C++C + F P + NPA CK C CN L SSC +C + G C C PG+ Y + C+ C CH++GS +G CD +G+C C+PG+TG+ C C Sbjct: 851 KCIYNTAGFYCDRCKDGFFGNPLAP----NPADKCKACNCN-------------LYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGF-----YNLQSGQGCERCDCHALGSTNGQ-CDIRTGQCECQPGITGQHCERC 968 HSP 4 Score: 51.2174 bits (121), Expect = 8.107e-6 Identity = 43/144 (29.86%), Postives = 55/144 (38.19%), Query Frame = 2 Query: 905 CECQHSTAGKDCEKC-----HEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C C G+ CE C E N P+S C C CN HS C + V +C DNT GP C++C+ GY+ + C+PC C S + P + C G TGK C C GY Sbjct: 690 CTCPVGYGGQFCEMCLSGYRRETPNLGPYSP--------CVLCACNGHSETCDPETGV------------CNCRDNTAGPHCEKCSDGYYGDSTAGT--SSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGY 811 HSP 5 Score: 50.8322 bits (120), Expect = 9.133e-6 Identity = 40/142 (28.17%), Postives = 61/142 (42.96%), Query Frame = 2 Query: 896 TYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 T QCEC G+DC C F + +++ C+RC+C H++ + +++G+ +C G C++C +F + CKPC CH GSLS D G+C C+ G G C C Y Sbjct: 902 TGQCECLPHVTGQDCGACDPGFYN-------LQSGQGCERCDC--HALGST-NGQCDIRTGQC------ECQPGITGQHCERCEVNHFG------FGPEGCKPCDCHPEGSLSLQCKD--DGRCECREGFVGNRCDQCEENY 1019
BLAST of Netrin 1 vs. Ensembl Human
Match: LAMC3 (laminin subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:6494]) HSP 1 Score: 199.519 bits (506), Expect = 3.601e-53 Identity = 135/432 (31.25%), Postives = 204/432 (47.22%), Query Frame = 2 Query: 65 LQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVH-ESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPA----------LTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 + CY G P+ C P+ N A +AS TCG + E C AH C++C++ DP+ ++ + D H + + T W S + YPTSVN+TL L K I+++ ++ P+ IYK W P+Q+++ CQ T+ P + FSDI+ L GG+ + F+ +GR ++ S Q W+ +TE+ IS L +G+ + ++ + ++ Y++ SD +GG+ C+GHAS C CQH+T G DCE+C F D+PW+ T C C C+ S +C FD +F +G HG C C D+T GP C++C ++ H P + C+PC C S GSL CD +G C CKP VTG C C PG+ Sbjct: 22 MGACYDGAGRPQRCLPVFENAAFGRLAQASHTCG-SPPEDFCPHVGAAGAGAH--CQRCDAADPQRHHNASYLTDFHSQDESTWWQSPSMAFGVQYPTSVNITLRLGKAYEITYVRLKFHTSRPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPGEDERVAFCTSEFSDISPLS------------GGN------VAFSTLEGRPSAYNFEESPGLQEWVTSTELLIS--LDRLNTFGDDIFKDPKVLQS--YYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECLPCNCSGRSEECTFDRELFRSTG--HGGRCHHCRDHTAGPHCERCQENFY--HWDP---RMPCQPCDCQSAGSLH-LQCDD-TGTCACKPTVTGWKCDRCLPGF 419 HSP 2 Score: 72.0182 bits (175), Expect = 2.877e-12 Identity = 48/153 (31.37%), Postives = 68/153 (44.44%), Query Frame = 2 Query: 866 ASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLS-GTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 A I S + C G+ CE C + F P +P C +C+C+ + D N + G C+ C NT G C+ C G++ P + C PC CH GS+S PCD V+G+C C P VT + C+ C PG+ Sbjct: 762 ACTTIPESREVVCTHCPPGQRGRRCEVCDDGFFGDPL--GLFGHPQPCHQCQCSGN-----VDPNAVGNCDPLSGH-CLRCLHNTTGDHCEHCQEGFYGSALAP-RPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLPHVTARDCSRCYPGF 905 HSP 3 Score: 55.8398 bits (133), Expect = 2.458e-7 Identity = 41/138 (29.71%), Postives = 58/138 (42.03%), Query Frame = 2 Query: 911 CQHSTAGKDCEKCHEEFNDQPWSSATIRNPA-VCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C H+T G CE C E F + SA PA C C C+ + + + G C + C +C PG+F + C+ C CH +GS C +G+C C+PGVTG+ C C G+ Sbjct: 834 CLHNTTGDHCEHCQEGF----YGSALAPRPADKCMPCSCHPQG-----SVSEQMPCDPVTGQ--CSCLPHVTARDCSRCYPGFFD-----LQPGRGCRSCKCHPLGSQEDQ-CHPKTGQCTCRPGVTGQACDRCQLGF 954
BLAST of Netrin 1 vs. Ensembl Human
Match: NTN5 (netrin 5 [Source:HGNC Symbol;Acc:HGNC:25208]) HSP 1 Score: 183.341 bits (464), Expect = 3.293e-50 Identity = 101/330 (30.61%), Postives = 159/330 (48.18%), Query Frame = 2 Query: 854 CHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVK-------SNSSC-DFCQRKSKRIN--FKRFCSKETNFKVNIKSRESRG-QWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCN 1810 CHGHA+R + C+H T G CE C D PW AT R+P C C CN H+ +C F+ +F SG G C C +T G C C PG++R + PI+ + AC+ C CH +G+ GT C+Q SG+C CK GVTG TC C PGY+Q+ S + PC++I + + S+ C ++C R++ +R+C ++ + + + E+ G W R + V+ + Q R + WV + + CGC+ + G YL++ + T LIL++ + W+ W + +++ G C Sbjct: 159 CHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGT-CNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSLRRYCQQDHVLRAQVLASEAAGPAWQRLAVRVLAVYKQRAQPVRRGDQD--------AWVPRADLTCGCLRLQPGTDYLLLGSAVGDP--DPTRLILDRHGLALPWRPRWARPLKRLQQEERAGGCR 476
BLAST of Netrin 1 vs. Ensembl Celegans
Match: unc-6 (Netrin unc-6 [Source:UniProtKB/Swiss-Prot;Acc:P34710]) HSP 1 Score: 310.071 bits (793), Expect = 9.285e-97 Identity = 190/598 (31.77%), Postives = 297/598 (49.67%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-LTP--KEHYG-----NLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQK 1828 C+ G P C P IN A + AS TCG N + CT G + C+ C++ + S + ++ D + G TCW+S S P +V+LTL L K+ ++++++ C PD + +YK W+P+Q+++ +C+ F D + + N + VC M GG+ F + P ++F + S Q+W+ AT+I++ + L+P E YG N E + Y + ++ +GG+ C+GHASR I Y C+C+H+TAG +CE C D+PW AT + C C CN H+ +C FD +F SG G C++C NT G C C PG+ R + P+ H+ ACK C CH VGSL G C+Q SG+C CKPGVTG TC CA GY+Q+ S PC KI + S+ S C C+ KR+N K+FC ++ ++ + SRE W ++ +E V+ R + N++ E TS+W+ V C C G YL++ K + L++N V+ +W++ ++ +F +DK+G+C T + Sbjct: 37 CHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHPASLLTDLNSIGNMTCWVST---PSLSPQNVSLTLSLGKKFELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQFYSSECRRIFGR-----DPDVSITKSNEQEAVC-TASHIMGPGGNRVAFPFLENRP-SAQNFEN--SPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSL-GKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKCRIVPKRLNQKKFCKRDHAVQMVVVSREMVDGWAKYKIVVESVFKRGTE-------NMQRGE-TSLWISPQGVICKCPKLRVGRRYLLLG--KNDSDHERDGLMVNPQTVLVEWEDDIMDKVLRFSKKDKLGQCPEITSHR 611
BLAST of Netrin 1 vs. Ensembl Celegans
Match: unc-6 (Netrin unc-6 [Source:UniProtKB/Swiss-Prot;Acc:P34710]) HSP 1 Score: 310.071 bits (793), Expect = 9.285e-97 Identity = 190/598 (31.77%), Postives = 297/598 (49.67%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-LTP--KEHYG-----NLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQK 1828 C+ G P C P IN A + AS TCG N + CT G + C+ C++ + S + ++ D + G TCW+S S P +V+LTL L K+ ++++++ C PD + +YK W+P+Q+++ +C+ F D + + N + VC M GG+ F + P ++F + S Q+W+ AT+I++ + L+P E YG N E + Y + ++ +GG+ C+GHASR I Y C+C+H+TAG +CE C D+PW AT + C C CN H+ +C FD +F SG G C++C NT G C C PG+ R + P+ H+ ACK C CH VGSL G C+Q SG+C CKPGVTG TC CA GY+Q+ S PC KI + S+ S C C+ KR+N K+FC ++ ++ + SRE W ++ +E V+ R + N++ E TS+W+ V C C G YL++ K + L++N V+ +W++ ++ +F +DK+G+C T + Sbjct: 37 CHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHPASLLTDLNSIGNMTCWVST---PSLSPQNVSLTLSLGKKFELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQFYSSECRRIFGR-----DPDVSITKSNEQEAVC-TASHIMGPGGNRVAFPFLENRP-SAQNFEN--SPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSL-GKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKCRIVPKRLNQKKFCKRDHAVQMVVVSREMVDGWAKYKIVVESVFKRGTE-------NMQRGE-TSLWISPQGVICKCPKLRVGRRYLLLG--KNDSDHERDGLMVNPQTVLVEWEDDIMDKVLRFSKKDKLGQCPEITSHR 611
BLAST of Netrin 1 vs. Ensembl Celegans
Match: lam-2 (Laminin-like protein lam-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18823]) HSP 1 Score: 209.92 bits (533), Expect = 4.593e-57 Identity = 141/443 (31.83%), Postives = 216/443 (48.76%), Query Frame = 2 Query: 74 CYS-ANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESS-YPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF----KMPAL-----TTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTS----DDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQ--TNSLKN 1345 CY A P+ C P +N A + ++ ++TCG C + ++ CE C+ S +K + D ++ ET W S+ + E YPT+ NLTL L K I+++ ++ P+ IYK +W PWQ+++ C+ T+ + P L T FSDI+ + GG+ I F+ +GR ++E Q W+ A+ IRIS L +G+ + ++ + + Y++ SD +GG+ C+GHAS + +S ++ C C+H+T G DC +C +ND+PW S T C C C+ S +C FD +F ++G HG CIDC NT G C+QC ++R+ +N C C C+ +GSLS T CD GKC CKPGVTG+ C C G+ TN KN Sbjct: 40 CYDRATRQPQRCVPDFVNAAFNLEVQVTNTCGTKRPTKFCVQSGHTGQRS--VCETCDDRHEGFSHPAKYLTDFNVGNNETWWQSDTMQEGQQYPTTTNLTLVLGKSFDITYVRLKFISPRPESFTIYKKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEATAQCTKEFSDISPIT------------GGN------IAFSTLEGRPSAHAFEESEVLQKWVTASAIRIS--LNRMNTFGDEVFKDPQVLRS--YYYAISDFAVGGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANECIACNCSQLSNRCYFDQQLFEETG--HGGHCIDCQGNTQGVHCEQCIANHWRRPG-----ENYCVACGCNEIGSLS-TQCDN-EGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKN 449 HSP 2 Score: 69.707 bits (169), Expect = 4.930e-12 Identity = 47/135 (34.81%), Postives = 63/135 (46.67%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCA 1312 +C +T G +CE C + W A I C+ C C + + L+ + G DC N +G QCDQCA G+ Y I C+ C C +GS G CD +G+C CKPGVTG+ C CA Sbjct: 858 KCIFNTHGFNCENCKPGY----WGDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECNQQDGQ--CDCLPNVIGIQCDQCAHGF-----YNITSGLGCQECNCDPLGS-EGNTCDVNTGQCQCKPGVTGQRCDRCA 980 HSP 3 Score: 52.7582 bits (125), Expect = 9.153e-7 Identity = 45/165 (27.27%), Postives = 71/165 (43.03%), Query Frame = 2 Query: 854 CHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVF--DFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLC------HSVGSLSGTPCDQVSGKC-FCKPGVTGKTCTHCAPGY 1321 CH H++ ++ C C+H+TAG CE+C + + A C++C C N C+ D +V C +C + G +CD+C+ GYF C C C +S+G+ CD+++G+C C G C +C PGY Sbjct: 738 CHNHSNSC---EAESGSCICEHNTAGDTCERCARGY----YGDALQGTEEDCQKCPCPNDG-PCILHADGDVI----------CTECPNGYTGRRCDECSDGYFGNPK----DGTECVECACSGNTDPNSIGN-----CDKITGECKKCIFNTHGFNCENCKPGY 875 HSP 4 Score: 50.0618 bits (118), Expect = 5.907e-6 Identity = 43/145 (29.66%), Postives = 57/145 (39.31%), Query Frame = 2 Query: 905 CECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYF---RQHAYPIYHKNACK---PCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 CEC G+ CE C F + + C +C+C+NHS C SCI C NT G C++CA GY+ Q K C PC+ H+ G + T C G TG+ C C+ GY Sbjct: 702 CECLPGFVGQFCESCESGFRRETKFGGPFNH---CIKCDCHNHSNSC-----------EAESGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCILHADGDVICTECPN---------GYTGRRCDECSDGY 822
BLAST of Netrin 1 vs. Ensembl Celegans
Match: lam-3 (LAMinin related. See also lmb; Laminin alpha chain [Source:UniProtKB/TrEMBL;Acc:G5ECE3]) HSP 1 Score: 166.007 bits (419), Expect = 1.849e-42 Identity = 126/466 (27.04%), Postives = 209/466 (44.85%), Query Frame = 2 Query: 110 PLLINLAQPMHIEASSTCGENGAESIC--TEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFA---KDCQLTFKMPALT-------TDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRN-----AENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDT---YQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFD-------FNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLS--------GTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKN-PCRKISKLRHLVKSNSSC 1399 P + NLA I A+ TCG+ AE C E + +C+ D + + ++ I G W S + VN+T+ L++ +++I +++ G + + + + + PWQY+A +C F +PA T D V+ S+ + + P LE I + GR + S Q + A +R+ +++P+ +L++ K++ + Y + SDI IGGQ +C+GHA SD ++CEC+H+T G+ C +C FN PW T +P VC++C+C NH+ CV+D +++ + G C++C NT G C++C GY+R Y ++AC+ C C VGS+S Q G C CKPG G+ C CAPGY+ + + PC + + +SC Sbjct: 50 PNIFNLATNSLITATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDAN-NVHKRHPIEYAIDGTRRWWQSPSLANGLRFEKVNITIDLRQEYQVAYIILKMGNSPRPGTWVLEKSLDGEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSKITP----LENGE-----------IHTSLVNGRPGAENTSLELQKFTRARFVRLR-LISPRTLNADLMIINKKSDSLDKSVTMRYFYSISDISIGGQCICYGHAESC--PSDPVTGQFKCECRHNTCGESCNRCCPLFNQLPWKPGTNSHPNVCQQCQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASC 496 HSP 2 Score: 75.485 bits (184), Expect = 1.004e-13 Identity = 58/171 (33.92%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 854 CHGHASRIIRTSDDTYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCEC----NNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPC 1351 CHGH+ + DT C +C+H+T G CE C + A C +C C N+ S CV + GR G C C G C+ C GY+ P + C PC CH GSL G C+ +SG+C CKPGVTG+TC+ C + N + C Sbjct: 1542 CHGHSQTC---NPDTSVCTDCEHNTFGDFCEHCLPGY----IGDAREGGANACTKCACPLVENSFSDSCVA-----VDHGR--GYVCNSCKPGYTGQYCETCVAGYYGD---PQHIGGTCSPCDCHPDGSLHGA-CNPLSGQCECKPGVTGRTCSMCQERHAFINRVCTSC 1694 HSP 3 Score: 73.9442 bits (180), Expect = 3.406e-13 Identity = 52/177 (29.38%), Postives = 77/177 (43.50%), Query Frame = 2 Query: 809 YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSC------IDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 +H+G++ + CH + + S++ +CEC+ + G C++C E D + N C C+CN+ +G I GS C +C G QCDQC P YF + C+ C C+ GS+ CDQ +GKC C+ V G C CA GY Sbjct: 928 HHWGNAQLHTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGD-------VENG--CPACDCND--------------TGSI-GSDCDQVSGQCNCKQGVFGKQCDQCRPSYFN------FTDAGCQFCHCNIYGSIEDGKCDQTTGKCECRENVEGTMCEKCADGY 1074 HSP 4 Score: 63.929 bits (154), Expect = 3.736e-10 Identity = 43/140 (30.71%), Postives = 63/140 (45.00%), Query Frame = 2 Query: 902 QCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 QC C+ GK C++C + + A C+ C CN + + D +G+ +C +N G C++CA GYF I + C+ C C GS C+ V+G+C CKPGVTG C C P + Sbjct: 1006 QCNCKQGVFGKQCDQCRPSYFN--------FTDAGCQFCHCNIYG--SIEDGKCDQTTGKC------ECRENVEGTMCEKCADGYFN-----ITSGDGCEDCGCDPTGS-EDVSCNLVTGQCVCKPGVTGLKCDSCLPNF 1123 HSP 5 Score: 59.6918 bits (143), Expect = 7.603e-9 Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECN---NHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPG 1318 EC H+T G +CE+C + + +P + R A C+ CEC+ + S CV D + ++G+ G CI C G +C++CAPGY R H C+PC C+ GS++ CD S C CK V G C C G Sbjct: 389 ECAHNTEGFNCERCKDGYY-RPSGLSHYREDA-CRTCECDPVGSVSDACVRD-DQSAENGQKPGD-CI-CKPGFGGRRCERCAPGY-RNHP-------TCEPCPCNRAGSVNFDTCDGAS--CQCKANVEGIYCDRCKAG 513 HSP 6 Score: 55.8398 bits (133), Expect = 1.117e-7 Identity = 49/195 (25.13%), Postives = 74/195 (37.95%), Query Frame = 2 Query: 878 IRTSDDTYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLS----------------------------------------------GTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 + +++D Y C C G CE C + F + P + C C CN + I + N ++G+ C+ C +T G C+ C ++H + + CKPC CH+ G+++ G+ CDQVSG+C CK GV GK C C P Y Sbjct: 849 VASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGK-------CIECTCNGN-IDPMGIGNCDSETGK-----CLKCIGHTTGDSCESC-----KEHHWGNAQLHTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPACDCNDTGSIGSDCDQVSGQCNCKQGVFGKQCDQCRPSY 1025
BLAST of Netrin 1 vs. Ensembl Celegans
Match: lam-1 (LAMinin related. See also lmb [Source:UniProtKB/TrEMBL;Acc:V6CIX7]) HSP 1 Score: 147.517 bits (371), Expect = 1.841e-36 Identity = 122/444 (27.48%), Postives = 194/444 (43.69%), Query Frame = 2 Query: 98 KPCEPLLINL--AQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSL-------DP-KLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKM-----PALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASR------------IIRTSDDTY-QCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQ--------VSGKCFCKPGVTGKTCTHCAPGY 1321 + C P+ NL + ++A+STCG G + C L + K C C+S +P +LS + VV + K W + +V+++ L+ + + + P +II + W ++YFA DC +F P TD + T S + + P G E ++++I + + D +S L T +R ++ T G+ LL + R + Y++ +I++ G C+GHASR ++ +D + +CEC H+T G +CEKC +ND PW A C++C CN H+++C FD V+ SG + G C DC NT G C+QC P ++R I + C PC C GS + C+ V+GKC+CK V G C C GY Sbjct: 35 RSCYPITGNLLIGRKSQLKATSTCGSQGRQRFCI--VSHLEEQTK-CFYCDSRTEWKPQREPYRLSHRIENVVTEVMDDKNRNW----YQSENGAQNVSISFDLEAEFHFTHLIMTFKSFRPAAMIIERSADFGKTWQVYRYFAYDCDSSFPGIPEGPPKKHTDVICT-SQYSDVAPS----------TGGEIVYKVISPHIVTENPYADEIS----TLLKITNLRFNF--TKLHTLGDDLL-DYRPEIDEKYYYAIYEIVVRGSCSCYGHASRCIPIDPHVSPNTVMERADIVHGRCECMHNTEGLNCEKCKAFYNDLPWRPAIGDEKNECRQCNCNRHALRCHFDRAVYESSGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHVCLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCKNGY 453 HSP 2 Score: 67.781 bits (164), Expect = 2.335e-11 Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSI--KCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAP 1315 +C H+T GK+CE+C F P TI +P VC CEC+ K + + + G + G C N G +CD+C GY+ + + C C C+ +G+ + CD+ +G C CK VTG+ C C P Sbjct: 373 DCMHNTQGKNCEQCKPFFYRDPRR--TIDDPHVCLPCECDKAGSQNKGICEGEEDAERGLVAGK--CYCKTNVDGNRCDRCKNGYWNLTETNV---DGCVACTCNLLGTYNNEGCDKYTGMCTCKRLVTGENCDQCLP 503 HSP 3 Score: 60.4622 bits (145), Expect = 4.075e-9 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 2 Query: 1082 IHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKP-GVTGKTCTHCAPGY 1321 + G C +C N VG +CDQCA G + + + CK C C +VGSL G CD+ SG+C C+ G+ G+ C C PG+ Sbjct: 793 VQGGQC-ECKPNVVGRRCDQCAIGTYG------FGPSGCKKCDCDAVGSL-GNDCDKQSGQCVCREKGIYGRQCNQCQPGF 865 HSP 4 Score: 58.151 bits (139), Expect = 2.006e-8 Identity = 53/168 (31.55%), Postives = 74/168 (44.05%), Query Frame = 2 Query: 854 CHGHASRIIRTSDD--TYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECN---NHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSL---SGTP---CDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C+G+ + S D T +C +C H T G CE C + + + A ++ C+RC CN +S K D R+ G C DN +G QCDQCA +F + C+ C C S G + G P C+ G+C CKPG G+ C C Y Sbjct: 988 CNGNIDMAMEGSCDAATGECLKCLHHTEGAQCEHCVDGY----YGDAKLK---TCQRCVCNELGTNSTKGACD--------RVSGQ--CPCHDNIIGMQCDQCAENHFN-----LASGAGCEACGCDSNGVVLNHEGVPHLQCNIFDGQCQCKPGRGGRKCDQCEDLY 1133 HSP 5 Score: 55.0694 bits (131), Expect = 1.673e-7 Identity = 46/166 (27.71%), Postives = 71/166 (42.77%), Query Frame = 2 Query: 839 GGQPLCHGHASR-IIRTSDDTYQ---CECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGT-PCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 GG + HA +R S + Q C C+ G+ C +C + P C+RC+CN + I + + +G C+ C +T G QC+ C GY Y C+ C+C+ +G+ S CD+VSG+C C + G C CA + Sbjct: 928 GGPTSGYQHADTCYLRNSGNNTQDIVCNCKSGYQGERCGECAQNHWGSPREVG-----GTCERCDCNGN-IDMAMEGSCDAATGE-----CLKCLHHTEGAQCEHCVDGY-----YGDAKLKTCQRCVCNELGTNSTKGACDRVSGQCPCHDNIIGMQCDQCAENH 1077 HSP 6 Score: 49.6766 bits (117), Expect = 8.988e-6 Identity = 43/151 (28.48%), Postives = 62/151 (41.06%), Query Frame = 2 Query: 902 QCECQHSTAGKDCEKCHE-EFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPC 1351 QC C + G C++C E FN + + A C+ C C+++ + + L+ G C G +CDQC Y+ P + C C C+ GS S C + +G C C+ G G C CA GY NPC Sbjct: 1058 QCPCHDNIIGMQCDQCAENHFN--------LASGAGCEACGCDSNGVVLNHEGVPHLQCNIFDGQ--CQCKPGRGGRKCDQCEDLYWGDPTTP----DGCHRCECNPTGSKS-LQCHRNNGTCECQAGSGGALCNECARGYTGQWPYCNPC 1193
BLAST of Netrin 1 vs. Ensembl Fly
Match: NetA (gene:FBgn0015773 transcript:FBtr0073942) HSP 1 Score: 244.973 bits (624), Expect = 3.881e-71 Identity = 167/576 (28.99%), Postives = 259/576 (44.97%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGH--NPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAEN--------PV-----------------------YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNS-----LKNPCRKISKLR---------------------------------HLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLE 1582 CY+ +P+ C P +N A + ASSTCG +GA+ C E+ D +SC C+ DP S ++ + D + TCW SE V S +V LTL L K+ ++++ ++LC H PD ++IYK W P+Q+F+ C+ F PA + + N + C D+ + L I F+ +GR L + Q+W+ AT+IR+ + + LL E A + P+ H+ SD +GG+ C+GHAS+ + CEC H+TAG+DCE+C D+PW+ AT + CK C CN H+ +C F+ +F S + G C +C +T G C QC G++R P+ H+ CK C CH +GS SG C+ SG+C CK GVTG TC CA GY+Q+ S +K P R I+ L + + C C+ +KR+N +FC ++ + R++ + + E++ R DP V+ ++ Sbjct: 40 CYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYC-EYQDH----ERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRSEPVTGSG--DNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRH-----NEHEARCSDVTR--------PLVSRIAFSTLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGS-SGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGRECGKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVS--REVQ----RRAMDPDVADYEMD 588
BLAST of Netrin 1 vs. Ensembl Fly
Match: NetA (gene:FBgn0015773 transcript:FBtr0346088) HSP 1 Score: 244.973 bits (624), Expect = 3.881e-71 Identity = 167/576 (28.99%), Postives = 259/576 (44.97%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGH--NPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAEN--------PV-----------------------YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNS-----LKNPCRKISKLR---------------------------------HLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLE 1582 CY+ +P+ C P +N A + ASSTCG +GA+ C E+ D +SC C+ DP S ++ + D + TCW SE V S +V LTL L K+ ++++ ++LC H PD ++IYK W P+Q+F+ C+ F PA + + N + C D+ + L I F+ +GR L + Q+W+ AT+IR+ + + LL E A + P+ H+ SD +GG+ C+GHAS+ + CEC H+TAG+DCE+C D+PW+ AT + CK C CN H+ +C F+ +F S + G C +C +T G C QC G++R P+ H+ CK C CH +GS SG C+ SG+C CK GVTG TC CA GY+Q+ S +K P R I+ L + + C C+ +KR+N +FC ++ + R++ + + E++ R DP V+ ++ Sbjct: 40 CYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYC-EYQDH----ERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRSEPVTGSG--DNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRH-----NEHEARCSDVTR--------PLVSRIAFSTLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGS-SGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSHIAPCIKQPPRMINMLDTQNTAPEPDEPESSPGSGGDRNGAAGMAAQSQYYRTEGGRECGKCRVSTKRLNLNKFCKRDYAIMAKVIGRDTSSEAVS--REVQ----RRAMDPDVADYEMD 588
BLAST of Netrin 1 vs. Ensembl Fly
Match: NetA (gene:FBgn0015773 transcript:FBtr0308337) HSP 1 Score: 242.276 bits (617), Expect = 1.465e-70 Identity = 152/463 (32.83%), Postives = 224/463 (48.38%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGH--NPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAEN--------PV-----------------------YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRK 1357 CY+ +P+ C P +N A + ASSTCG +GA+ C E+ D +SC C+ DP S ++ + D + TCW SE V S +V LTL L K+ ++++ ++LC H PD ++IYK W P+Q+F+ C+ F PA + + N + C D+ + L I F+ +GR L + Q+W+ AT+IR+ + + LL E A + P+ H+ SD +GG+ C+GHAS+ + CEC H+TAG+DCE+C D+PW+ AT + CK C CN H+ +C F+ +F S + G C +C +T G C QC G++R P+ H+ CK C CH +GS SG C+ SG+C CK GVTG TC CA GY+Q+ S PC K Sbjct: 40 CYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYC-EYQDH----ERSCHTCDMTDPLRSFPARSLTDLNNSNNVTCWRSEPVTGSG--DNVTLTLSLGKKFELTYVILQLCPHAPRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRH-----NEHEARCSDVTR--------PLVSRIAFSTLEGRPSSRDLDSSPVLQDWVTATDIRVVFHRLQRPDPQALLSLEAGGATDLASGKYSVPLANGPAGNNIEANLGGDVATSGSGLHYAISDFSVGGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGS-SGKICNSTSGQCPCKDGVTGLTCNRCARGYQQSRSHIAPCIK 481
BLAST of Netrin 1 vs. Ensembl Fly
Match: LanB2 (gene:FBgn0267348 transcript:FBtr0345031) HSP 1 Score: 202.986 bits (515), Expect = 1.205e-54 Identity = 146/439 (33.26%), Postives = 212/439 (48.29%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMP-------------ALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTS----DDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPG-YFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQ 1327 CY G P+ C P IN A + IE+++TCGE C + + + HK+CE C D S + D H T W SE + E +P VNLTL L K I+++ + P+ IYK SE+ W P+Q+++ C+ T+ +P AL T + +SDI+ L+ D E I F+ +GR G ++ Q W+ AT+IRI+ L +G+ L + + ++ Y + SDI +G + C+GHAS+ + ++ + T CEC+H+T G DC++C +ND W +T CK C CN + KC FD N+F ++G HG C+DC +N GP C++C Y R Y C C C VGS S C+ GKC CKPGVTG C C Y Q Sbjct: 57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFCIQ---TMNQNHKNCEFCKYNDHNPS----FLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCT---SEYSDISPLR----DGE--------------IAFSTLEGRPSGINFERSGELQEWVTATDIRIT--LDRLNTFGDELFGDSQVLKS--YFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTG--HGGHCLDCRENRDGPNCERCKENFYMRDDGY-------CVNCACDPVGSRS-LQCNS-HGKCQCKPGVTGDKCDRCDNNYYQ 452 HSP 2 Score: 78.9518 bits (193), Expect = 1.003e-14 Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 878 IRTSDDTYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNA-CKPCLCHSVGS----LSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 ++ ++DT C EC G CE+C + F P + + CK C+CN + D N R G C+ C NT G CDQC G+F P+ + C C C+ G+ S T CDQV+G+C CKP V G+ C C PGY Sbjct: 802 LQINEDTVICTECPKGYFGSRCEQCSDGFFGDP--TGLLGEVQTCKSCDCNGN-----VDPNAVGNCNRTTGE-CLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGY 944 HSP 3 Score: 72.0182 bits (175), Expect = 1.192e-12 Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 +C H+TAG+ C++C P + R C RC C + D + ++ G C N +G C +C PGYF I N C+ CLC VGS + T CD+ SG+C C+PGV G+ C C Sbjct: 870 KCIHNTAGEHCDQCLSGHFGDPLALPHGR----CDRCSC--YEAGTEQDEQSITRCDQVTGQ--CQCKPNVIGRDCGECQPGYFN-----IRSGNGCENCLCDPVGSYNST-CDRYSGQCHCRPGVMGQRCDQC 989 HSP 4 Score: 51.6026 bits (122), Expect = 2.965e-6 Identity = 44/147 (29.93%), Postives = 63/147 (42.86%), Query Frame = 2 Query: 875 IIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLK--SGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 I R T QC+C+ + G+DC +C + IR+ C+ C C+ V +N SG+ H C +G +CDQC ++ + CKPC C GS G CDQ +G+C C V G+ C C Sbjct: 916 ITRCDQVTGQCQCKPNVIGRDCGECQPGY-------FNIRSGNGCENCLCDP-----VGSYNSTCDRYSGQCH------CRPGVMGQRCDQCENYFYG------FSSEGCKPCECDESGS-KGFQCDQ-NGQCPCNDNVEGRRCDRC 1036
BLAST of Netrin 1 vs. Ensembl Fly
Match: LanB2 (gene:FBgn0267348 transcript:FBtr0076382) HSP 1 Score: 202.986 bits (515), Expect = 1.205e-54 Identity = 146/439 (33.26%), Postives = 212/439 (48.29%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMP-------------ALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTS----DDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPG-YFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQ 1327 CY G P+ C P IN A + IE+++TCGE C + + + HK+CE C D S + D H T W SE + E +P VNLTL L K I+++ + P+ IYK SE+ W P+Q+++ C+ T+ +P AL T + +SDI+ L+ D E I F+ +GR G ++ Q W+ AT+IRI+ L +G+ L + + ++ Y + SDI +G + C+GHAS+ + ++ + T CEC+H+T G DC++C +ND W +T CK C CN + KC FD N+F ++G HG C+DC +N GP C++C Y R Y C C C VGS S C+ GKC CKPGVTG C C Y Q Sbjct: 57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFCIQ---TMNQNHKNCEFCKYNDHNPS----FLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCT---SEYSDISPLR----DGE--------------IAFSTLEGRPSGINFERSGELQEWVTATDIRIT--LDRLNTFGDELFGDSQVLKS--YFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTG--HGGHCLDCRENRDGPNCERCKENFYMRDDGY-------CVNCACDPVGSRS-LQCNS-HGKCQCKPGVTGDKCDRCDNNYYQ 452 HSP 2 Score: 78.9518 bits (193), Expect = 1.003e-14 Identity = 54/154 (35.06%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 878 IRTSDDTYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNA-CKPCLCHSVGS----LSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 ++ ++DT C EC G CE+C + F P + + CK C+CN + D N R G C+ C NT G CDQC G+F P+ + C C C+ G+ S T CDQV+G+C CKP V G+ C C PGY Sbjct: 802 LQINEDTVICTECPKGYFGSRCEQCSDGFFGDP--TGLLGEVQTCKSCDCNGN-----VDPNAVGNCNRTTGE-CLKCIHNTAGEHCDQCLSGHF---GDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGY 944 HSP 3 Score: 72.0182 bits (175), Expect = 1.192e-12 Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 +C H+TAG+ C++C P + R C RC C + D + ++ G C N +G C +C PGYF I N C+ CLC VGS + T CD+ SG+C C+PGV G+ C C Sbjct: 870 KCIHNTAGEHCDQCLSGHFGDPLALPHGR----CDRCSC--YEAGTEQDEQSITRCDQVTGQ--CQCKPNVIGRDCGECQPGYFN-----IRSGNGCENCLCDPVGSYNST-CDRYSGQCHCRPGVMGQRCDQC 989 HSP 4 Score: 51.6026 bits (122), Expect = 2.965e-6 Identity = 44/147 (29.93%), Postives = 63/147 (42.86%), Query Frame = 2 Query: 875 IIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLK--SGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 I R T QC+C+ + G+DC +C + IR+ C+ C C+ V +N SG+ H C +G +CDQC ++ + CKPC C GS G CDQ +G+C C V G+ C C Sbjct: 916 ITRCDQVTGQCQCKPNVIGRDCGECQPGY-------FNIRSGNGCENCLCDP-----VGSYNSTCDRYSGQCH------CRPGVMGQRCDQCENYFYG------FSSEGCKPCECDESGS-KGFQCDQ-NGQCPCNDNVEGRRCDRC 1036
BLAST of Netrin 1 vs. Ensembl Zebrafish
Match: ntn1a (netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]) HSP 1 Score: 311.612 bits (797), Expect = 3.405e-97 Identity = 186/593 (31.37%), Postives = 302/593 (50.93%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAES-ICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY NG P+ C P +N A + ASSTCG+ + + TE D+ H++C C++ DPK + + D + TCW S+ + YP +V LTL L K+ +++++++ C P+ + I+K W P+QY++ C+ + P+ T T N + +C D M GG LI F+ GR + Q+W+ AT+I++++ + +G+ + A + Y + SD+ +GG+ C+GHASR ++ D CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S+ C+ + SK +IN K++C K+ +V+I + G+W +F I V+ + + R L WV V C C + G YL++ N + + GQ+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 40 CYDENGHPRRCIPDFVNAAFGKEVRASSTCGKTPSRYCVVTEKGDE---RHRNCHTCDASDPKKNHPPAYLTDLNNPHNLTCWQSDNYLQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQCRKMYNKPSKATITKQ-----NEQEAICTDSHTDMHPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVTF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASRCVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCANGYQQSRSPIAPCIKIPIAPPTTTASSTEEPSDCESYCKASKGKLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFL--------WVRAKDVACKCPKIKSGKKYLLLGNDEDSP--GQSGMVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 602
BLAST of Netrin 1 vs. Ensembl Zebrafish
Match: ntn1a (netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]) HSP 1 Score: 311.612 bits (797), Expect = 3.405e-97 Identity = 186/593 (31.37%), Postives = 302/593 (50.93%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAES-ICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY NG P+ C P +N A + ASSTCG+ + + TE D+ H++C C++ DPK + + D + TCW S+ + YP +V LTL L K+ +++++++ C P+ + I+K W P+QY++ C+ + P+ T T N + +C D M GG LI F+ GR + Q+W+ AT+I++++ + +G+ + A + Y + SD+ +GG+ C+GHASR ++ D CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S+ C+ + SK +IN K++C K+ +V+I + G+W +F I V+ + + R L WV V C C + G YL++ N + + GQ+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 40 CYDENGHPRRCIPDFVNAAFGKEVRASSTCGKTPSRYCVVTEKGDE---RHRNCHTCDASDPKKNHPPAYLTDLNNPHNLTCWQSDNYLQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQCRKMYNKPSKATITKQ-----NEQEAICTDSHTDMHPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVTF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASRCVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCANGYQQSRSPIAPCIKIPIAPPTTTASSTEEPSDCESYCKASKGKLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFL--------WVRAKDVACKCPKIKSGKKYLLLGNDEDSP--GQSGMVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 602
BLAST of Netrin 1 vs. Ensembl Zebrafish
Match: ntn2 (netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]) HSP 1 Score: 296.59 bits (758), Expect = 1.731e-91 Identity = 177/599 (29.55%), Postives = 298/599 (49.75%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLL--REKRNAEN-----PVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLR-----HLVKSNSSCD-FCQ--RKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY G + C P IN A + SS CG + S C+ A ++C+ C++ DP+ + + + D + TCW SE + S P +V LTL L K+ I++++++ C P+ + IYK W+P+Q+++ C+ + P T N + +C D + GG LI F+ GR G + Q+W+ T+IR+ + + +H L + RE +A P Y++ D +GG+ C+GHASR +R D CEC+H+T G +C++C D+PW AT + C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R I H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++ + + CD +C+ + + +IN K++C K+ +V++ E+ G W +F + V+ +++ DP ++ +WVH + C C G +L++ + + T + L +++ ++ W++ W + +F ++K GKC++ Sbjct: 26 CYEETGAARRCIPEFINAAFGQEVSVSSVCGRPVSRS-CSLVERDDRPAVRTCQICDASDPRNAHPASYLTDLNSAHNLTCWQSENLQSS--PLNVTLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGRTWTPYQFYSSQCRRMYNRPNKAAITKQ-----NEQEALCTDGHTDLYPLSGG------LIAFSTLDGRPSGKDFDSSPVLQDWVTVTDIRV--VFSRPQHTRALPMSGRESEDALGAPGSLPTYYYAVGDFQVGGRCKCNGHASRCVREKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVIKPTAVISTTEEPADCDSYCKPLKGNLKINMKKYCKKDYAVQVSVLDMETVGDWAKFSVSLMSVY-KSRGDPLKRGDHM-------LWVHMKDLACKCPRIHMGKRFLILGSTEGTANPERPGLQADKNSLVIQWRDIWTRRLRKFQRKEKKGKCSK 599
BLAST of Netrin 1 vs. Ensembl Zebrafish
Match: ntn2 (netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]) HSP 1 Score: 296.975 bits (759), Expect = 1.761e-91 Identity = 177/599 (29.55%), Postives = 298/599 (49.75%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLL--REKRNAEN-----PVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLR-----HLVKSNSSCD-FCQ--RKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY G + C P IN A + SS CG + S C+ A ++C+ C++ DP+ + + + D + TCW SE + S P +V LTL L K+ I++++++ C P+ + IYK W+P+Q+++ C+ + P T N + +C D + GG LI F+ GR G + Q+W+ T+IR+ + + +H L + RE +A P Y++ D +GG+ C+GHASR +R D CEC+H+T G +C++C D+PW AT + C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R I H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++ + + CD +C+ + + +IN K++C K+ +V++ E+ G W +F + V+ +++ DP ++ +WVH + C C G +L++ + + T + L +++ ++ W++ W + +F ++K GKC++ Sbjct: 35 CYEETGAARRCIPEFINAAFGQEVSVSSVCGRPVSRS-CSLVERDDRPAVRTCQICDASDPRNAHPASYLTDLNSAHNLTCWQSENLQSS--PLNVTLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGRTWTPYQFYSSQCRRMYNRPNKAAITKQ-----NEQEALCTDGHTDLYPLSGG------LIAFSTLDGRPSGKDFDSSPVLQDWVTVTDIRV--VFSRPQHTRALPMSGRESEDALGAPGSLPTYYYAVGDFQVGGRCKCNGHASRCVREKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVIKPTAVISTTEEPADCDSYCKPLKGNLKINMKKYCKKDYAVQVSVLDMETVGDWAKFSVSLMSVY-KSRGDPLKRGDHM-------LWVHMKDLACKCPRIHMGKRFLILGSTEGTANPERPGLQADKNSLVIQWRDIWTRRLRKFQRKEKKGKCSK 608
BLAST of Netrin 1 vs. Ensembl Zebrafish
Match: ntn1b (netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]) HSP 1 Score: 291.967 bits (746), Expect = 8.704e-90 Identity = 180/602 (29.90%), Postives = 295/602 (49.00%), Query Frame = 2 Query: 44 LVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAES-ICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS-----SCD-FCQ--RKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTR-NQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 A + CY NG+P+ C P +N A + SSTCG + + TE K + + C C++ DPK + + D + TCW SE + YP +V LTL L K+ +++++++ C P+ + I+K W P+Q+++ C+ + P+ T N + +C D M GG LI F+ GR + Q+W+ AT+I++++ +G+ + A + Y + SD+ +GG+ C+GHAS+ ++ + CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + I H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI +S CD C+ + ++ K++C K+ +V++ + G+W +F I V+ + + R QL +WV V C C + G YL+M + + + GQ+ ++ ++ ++ WK+ W + +F +DK GKC Sbjct: 30 FAAQSSPPDPCYDENGNPRRCIPDFVNSAFGKDVRVSSTCGSPPSRYCVVTE---KGEERSRDCNICDATDPKKTHPPAYLTDLNNPHNLTCWQSENYVQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKTWVPFQFYSTQCKKMYNKPSKAAITKQ-----NEQEAICTDSHTDMQPLTGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVTFNRL--HTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAAPTSSYSSPDGPTDCDSHCKAPKGKMKVTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGGHRIRRGDQL---------LWVRAKDVACKCPKIKPGRKYLLMGSDEEEDSRGQSGVVADRGSLLIPWKDLWARRLRKFQQRDKRGKC 602
BLAST of Netrin 1 vs. Ensembl Xenopus
Match: ntn1 (netrin 1 [Source:NCBI gene;Acc:779839]) HSP 1 Score: 290.041 bits (741), Expect = 8.215e-89 Identity = 181/595 (30.42%), Postives = 289/595 (48.57%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISE-GVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFR-LIPFNPRQGRSFGDVL--SKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKS----------NSSCD-FCQRKSKRI--NFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY A PK C P IN+A + S+TCG + +C + D + C+ C+ P+ S + D+ +TCW SE G+ ++P +V LTL L +R + + ++ C PD + IYK W P+Q+++ C+ + T + S + C D + G + L + L+ F P GR S Q+W+ AT+IR+ + + H+G + ++ A +G S+I +GG+ C+GHASR + CECQH+T G +C+ C + D+PW AT N C CECN HS +C F+ ++ SGR G C++C NT G C C GY R + PI + ACKPC CH +G+++ C+Q +G+C CK GVTG TC CAPGY+Q+ S PC +I + S + C +C+ R+ N +++C K+ + + S E G+W +F + + V+ + + R L WV + C C+ + G SYL++ N + E LIL+++ + W++ W + +F Q++ GKC Sbjct: 42 CYDAKQRPKYCIPDFINVALGQEVITSNTCGRT-PQKLCY-FLDSTNVTSRRCQLCDQKRPENSYPPSYMTDTDA---QTCWKSESGI---TFPQNVTLTLPLGRRFELVYASLRFCSPRPDSMAIYKSMDYGKTWIPFQFYSTHCRRVYDQ-----ATTSAISKPMQHEATCTDFQT-----GVKPLTKGLVAFMPLAGRPSARRFEYSPVLQDWVTATDIRVVFN---RLHHGKKMGIRRKTA-----FYGVSEIQVGGRCKCNGHASRCT-AGKEGLMCECQHNTIGPECDACKPFYYDRPWQRATPSNAHECVACECNLHSHRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKQGYKRDLSKPITSRKACKPCQCHPIGAVNAM-CNQTTGQCQCKTGVTGPTCNRCAPGYQQSRSAHMPCVRIQEEMTTTASYPQEWKAGTNGTECQSYCKPSHSRVHMNLRKYCKKDYVLRAQLLSMEKSGEWWQFTATVLTVYRQRRVPIRRGDQPL--------WVPDHDLACDCLRVQVGKSYLIIGNDE--ESPDPARLILDKNSLALPWRDVWGHKLRRFQQQERRGKC 598
BLAST of Netrin 1 vs. Ensembl Xenopus
Match: rps16 (ribosomal protein S16 [Source:Xenbase;Acc:XB-GENE-5786511]) HSP 1 Score: 277.33 bits (708), Expect = 3.177e-84 Identity = 177/593 (29.85%), Postives = 291/593 (49.07%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNA--ENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKL---RHLVKSNSSCD---FCQ--RKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVK-TTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY +G P+ C P +N A ++ASSTCG +L H C++ DP+ S + + D + G TCW SE S +V+LTL L K+ +++++++ C P+ + I+K W P+QY++ C+ + P+ + T N + +C D + + GG LI F+ GR L + Q+WL AT+IR+ + P +LL ++ A E P +++ + +GG+ C+GHASR + + C+C+H+T G +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + I + ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + L + D +C+ + + +IN K++C K+ +VN+ E G W +F I V+ +D R+ + + +W+H + C C YLVM + + +E G L +++ ++ W++ W + + ++K GKC Sbjct: 41 CYDEHGLPRRCVPEFVNAAFNKEVQASSTCG-------------RLATRH-----CDTTDPRKSYPASYLTDLNTAGNMTCWRSETFPRHS-SQNVSLTLSLGKKFEVTYVSLQFCSPRPESVAIFKSMDYGKSWVPYQYYSSQCRKVYGKPSRASVTKQ-----NEQEALCTDGQTELYPLTGG------LIAFSTLDGRPSAQDLDNSPVLQDWLTATDIRV-FFSRP-----HLLGNKESEASDEGPGFYYSVGEFQVGGRCKCNGHASRCGKDKEARLICDCKHNTEGPECDRCKPFHYDRPWQRATAREANECMACTCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDVSRAITDRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGLTCNRCAKGYQQSRSPIAPCIKIPAVVPTPALTSTEEPADCEQYCKPPKGNYKINLKKYCKKDFVVQVNVLEMEMVGSWAKFTVNILSVY--KCRDDRIKRGD------NFLWIHIKDLSCKCPKILLSRRYLVMGSSEGPSERPG---LTADKNSMVIQWRDAWTRRLRKLQRREKKGKC 585
BLAST of Netrin 1 vs. Ensembl Xenopus
Match: rps16 (ribosomal protein S16 [Source:Xenbase;Acc:XB-GENE-5786511]) HSP 1 Score: 262.307 bits (669), Expect = 1.029e-78 Identity = 170/587 (28.96%), Postives = 277/587 (47.19%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNA--ENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTE---LILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY +G P+ C P +N A ++ASSTCG +L H C++ DP+ S + + D + G TCW SE S +V+LTL L K+ +++++++ C P+ + I+K W P+QY++ C+ + P+ + T N + +C D + + GG LI F+ GR L + Q+WL AT+IR+ + P +LL ++ A E P +++ + +GG+ C+GHASR + + C+C+H+T G +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + I + ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + S+ + +VN+ E G W +F I V+ +D R+ + + +W+H + C C YLVM + + G +E L +++ ++ W++ W + + ++K GKC Sbjct: 41 CYDEHGLPRRCVPEFVNAAFNKEVQASSTCG-------------RLATRH-----CDTTDPRKSYPASYLTDLNTAGNMTCWRSETFPRHS-SQNVSLTLSLGKKFEVTYVSLQFCSPRPESVAIFKSMDYGKSWVPYQYYSSQCRKVYGKPSRASVTKQ-----NEQEALCTDGQTELYPLTGG------LIAFSTLDGRPSAQDLDNSPVLQDWLTATDIRV-FFSRP-----HLLGNKESEASDEGPGFYYSVGEFQVGGRCKCNGHASRCGKDKEARLICDCKHNTEGPECDRCKPFHYDRPWQRATAREANECMACTCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDVSRAITDRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGLTCNRCAKGYQQSRSPIAPCIKIPAVVPTPALTST-----------------EEPAVVQVNVLEMEMVGSWAKFTVNILSVY--KCRDDRIKRGD------NFLWIHIKDLSCKCPKILLSRRYLVMGSSE-----GPSERPGLTADKNSMVIQWRDAWTRRLRKLQRREKKGKC 560
BLAST of Netrin 1 vs. Ensembl Xenopus
Match: utp4 (UTP4 small subunit processome component [Source:Xenbase;Acc:XB-GENE-977755]) HSP 1 Score: 208.764 bits (530), Expect = 2.521e-56 Identity = 140/442 (31.67%), Postives = 217/442 (49.10%), Query Frame = 2 Query: 44 LVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFK-------------MPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 L + + CY G P+ C P +N A + A++TCG E C + + KSC C+S L ++ + D + + + T W S+ + YP+++NLTL L K I+++ ++ P+ +YK E W P+QY++ C+ T++ AL TD FSDI+ L GG+ + F+ +GR ++ S Q W+ AT+IR++ L +G+ + + + ++ Y++ SD +GG+ C+GHAS +R + C C+H+T G DCEKC +ND+PW +T +P C C CN S +C FD ++ +G HG C C DNT GP C++C Y+RQ + C C C+ VGSLS T CD G+C CKPGV G+ C C PG+ Sbjct: 9 LGTVRAAMDECYE-EGSPQRCMPEFVNAAFNATVVATNTCG-TPPEEYCVQT--GVTGVTKSCHICDSGQFHLQHGAEYLTDYNNQAEITWWQSQTMLAGIQYPSTINLTLHLGKAFDITYVRLKFHTSRPESFALYKRTHEDGPWIPYQYYSGSCEKTYQKFNRGFIRTGEDEQQALCTDE---FSDISPLT------------GGN------VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT--LNRLNTFGDEVFSDPKVLKS--YYYAISDFAVGGRCKCNGHASECVRNEFEKIVCNCKHNTFGSDCEKCLPFYNDRPWRRSTADSPNECLPCNCNGRSQECYFDPELYRSTG--HGGHCTGCADNTDGPNCERCRENYYRQD-----NNEPCHACQCNPVGSLS-TQCDNY-GRCSCKPGVMGEKCDRCQPGF 412 HSP 2 Score: 70.0922 bits (170), Expect = 1.061e-11 Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 848 PLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKN--ACKPCLCHSVGSLSG-TPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 P G + ++ + + C T GK CE C + + P P C+ CEC+N+ D N R+ G C+ C NT G CD+C G++ P+ C+ C C+ G++ G + C+QV+G+C C P VT + C+ C PG+ Sbjct: 752 PCPGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRP--CRICECSNN-----IDPNAVGNCDRLTGE-CLKCIYNTGGFYCDRCRDGFY---GNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCECLPHVTERDCSACEPGF 901 HSP 3 Score: 64.3142 bits (155), Expect = 6.193e-10 Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAV-CKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 +C ++T G C++C + F P + +NP + C+ C CN + V +SG + +C + C C PG+ Y + C+ C CHS+GS SG CD +G+C C PG++G+ C C P + Sbjct: 829 KCIYNTGGFYCDRCRDGFYGNPLA----QNPDLKCRACSCNPYGT-------VKGQSGCNQVTGQCECLPHVTERDCSACEPGF-----YNLLSGRGCERCDCHSLGSTSGQ-CDVRTGQCECHPGISGQQCQQCEPNH 950 HSP 4 Score: 52.373 bits (124), Expect = 3.049e-6 Identity = 44/154 (28.57%), Postives = 58/154 (37.66%), Query Frame = 2 Query: 905 CECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY----KQTNSLKNPCR 1354 C C G+ CE+C + + S + C C CN HS C + V DC NT GP C++C+ GY+ + C+PC C S + P + C G TGK C C GY N PCR Sbjct: 668 CSCPTGYIGQFCERCAPGYRRENPSQGPY---SPCVLCTCNGHSDTCDPESGV------------CDCQHNTAGPHCERCSEGYYGDST--TGSASDCQPCPCPGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCR 804
BLAST of Netrin 1 vs. Ensembl Xenopus
Match: utp4 (UTP4 small subunit processome component [Source:Xenbase;Acc:XB-GENE-977755]) HSP 1 Score: 208.764 bits (530), Expect = 2.767e-56 Identity = 140/442 (31.67%), Postives = 217/442 (49.10%), Query Frame = 2 Query: 44 LVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFK-------------MPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 L + + CY G P+ C P +N A + A++TCG E C + + KSC C+S L ++ + D + + + T W S+ + YP+++NLTL L K I+++ ++ P+ +YK E W P+QY++ C+ T++ AL TD FSDI+ L GG+ + F+ +GR ++ S Q W+ AT+IR++ L +G+ + + + ++ Y++ SD +GG+ C+GHAS +R + C C+H+T G DCEKC +ND+PW +T +P C C CN S +C FD ++ +G HG C C DNT GP C++C Y+RQ + C C C+ VGSLS T CD G+C CKPGV G+ C C PG+ Sbjct: 12 LGTVRAAMDECYE-EGSPQRCMPEFVNAAFNATVVATNTCG-TPPEEYCVQT--GVTGVTKSCHICDSGQFHLQHGAEYLTDYNNQAEITWWQSQTMLAGIQYPSTINLTLHLGKAFDITYVRLKFHTSRPESFALYKRTHEDGPWIPYQYYSGSCEKTYQKFNRGFIRTGEDEQQALCTDE---FSDISPLT------------GGN------VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT--LNRLNTFGDEVFSDPKVLKS--YYYAISDFAVGGRCKCNGHASECVRNEFEKIVCNCKHNTFGSDCEKCLPFYNDRPWRRSTADSPNECLPCNCNGRSQECYFDPELYRSTG--HGGHCTGCADNTDGPNCERCRENYYRQD-----NNEPCHACQCNPVGSLS-TQCDNY-GRCSCKPGVMGEKCDRCQPGF 415 HSP 2 Score: 70.0922 bits (170), Expect = 1.098e-11 Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 848 PLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKN--ACKPCLCHSVGSLSG-TPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 P G + ++ + + C T GK CE C + + P P C+ CEC+N+ D N R+ G C+ C NT G CD+C G++ P+ C+ C C+ G++ G + C+QV+G+C C P VT + C+ C PG+ Sbjct: 755 PCPGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRP--CRICECSNN-----IDPNAVGNCDRLTGE-CLKCIYNTGGFYCDRCRDGFY---GNPLAQNPDLKCRACSCNPYGTVKGQSGCNQVTGQCECLPHVTERDCSACEPGF 904 HSP 3 Score: 64.3142 bits (155), Expect = 6.194e-10 Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAV-CKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 +C ++T G C++C + F P + +NP + C+ C CN + V +SG + +C + C C PG+ Y + C+ C CHS+GS SG CD +G+C C PG++G+ C C P + Sbjct: 832 KCIYNTGGFYCDRCRDGFYGNPLA----QNPDLKCRACSCNPYGT-------VKGQSGCNQVTGQCECLPHVTERDCSACEPGF-----YNLLSGRGCERCDCHSLGSTSGQ-CDVRTGQCECHPGISGQQCQQCEPNH 953 HSP 4 Score: 51.9878 bits (123), Expect = 3.349e-6 Identity = 44/154 (28.57%), Postives = 58/154 (37.66%), Query Frame = 2 Query: 905 CECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY----KQTNSLKNPCR 1354 C C G+ CE+C + + S + C C CN HS C + V DC NT GP C++C+ GY+ + C+PC C S + P + C G TGK C C GY N PCR Sbjct: 671 CSCPTGYIGQFCERCAPGYRRENPSQGPY---SPCVLCTCNGHSDTCDPESGV------------CDCQHNTAGPHCERCSEGYYGDST--TGSASDCQPCPCPGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLGENGAPRPCR 807
BLAST of Netrin 1 vs. Ensembl Mouse
Match: Ntn1 (netrin 1 [Source:MGI Symbol;Acc:MGI:105088]) HSP 1 Score: 301.212 bits (770), Expect = 3.380e-93 Identity = 184/606 (30.36%), Postives = 300/606 (49.50%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CNS DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y++ SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK ++N K++C K+ +++I + G W +F I V+ Q R+ + + S+W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K GKC + Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVY--KQGTSRIRRGD------QSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKK 603
BLAST of Netrin 1 vs. Ensembl Mouse
Match: Ntn1 (netrin 1 [Source:MGI Symbol;Acc:MGI:105088]) HSP 1 Score: 301.212 bits (770), Expect = 3.380e-93 Identity = 184/606 (30.36%), Postives = 300/606 (49.50%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CNS DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y++ SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK ++N K++C K+ +++I + G W +F I V+ Q R+ + + S+W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K GKC + Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVY--KQGTSRIRRGD------QSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKK 603
BLAST of Netrin 1 vs. Ensembl Mouse
Match: Ntn3 (netrin 3 [Source:MGI Symbol;Acc:MGI:1341188]) HSP 1 Score: 253.832 bits (647), Expect = 1.554e-75 Identity = 162/585 (27.69%), Postives = 265/585 (45.30%), Query Frame = 2 Query: 50 ALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQ--RKSKRINFKRFCSKETNFKVNIKSR-ESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTE----LILNQSDVIEDWKETW 1759 L CY +P+ C P L+N A + ASSTCG + C+S DP+ + S+ ++ + CW S+ + ++ P +V LT+ L K + F+++ C P + + K W P +F+ C L + ++PA + +CF ++ GG L+ F+ + G G L + Q+W+ AT+IRI +LT G+ + Y + ++++ +GG+ C+GHASR + + C+CQH T G DC +C + D+PW AT + C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + + AC+ C CH VG+ +G C+Q +G+C CK GVTG TC CAPG++Q+ S PC K ++ V+ C+ R S RI+ K+FC K+ +V + +R E+RG W RF + V+ ++ R +++WV CGC G YL++ L + ++ W++ W Sbjct: 22 GLPASADPCYDEAREPRSCIPGLVNAALGREVLASSTCGRSANRV------------------CDSSDPQRAHSADLLTSAPGTASPLCWRSDLLQQA--PFNVTLTVPLGKAFELVFVSLRFCSAPPTSVALLKSQDHGRSWVPLGFFSSSCTLDYGRLPAPADGPSGPGPEA-----LCFPAPQAQPDGGG-----LLAFSVQDGSPQGLDLDNSPVLQDWVTATDIRI--VLTRPAIQGD----TRDGGVTVPYSYSATELQVGGRCKCNGHASRCLLDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGA-AGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEESSPVEPQDCESHCRPARGSYRISLKKFCRKDYAVQVAVGARGEARGSWTRFPVAVLAVFRSGEERARRGS--------SALWVPTLDAACGCPRLLPGRRYLLLGGGPGAAAGSTAGRGQGLSAARGSLVLPWRDAW 561
BLAST of Netrin 1 vs. Ensembl Mouse
Match: Lamc1 (laminin, gamma 1 [Source:MGI Symbol;Acc:MGI:99914]) HSP 1 Score: 211.846 bits (538), Expect = 1.725e-57 Identity = 140/439 (31.89%), Postives = 215/439 (48.97%), Query Frame = 2 Query: 53 LNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHES-SYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-------------KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 + + C G P+ C P +N A + + A++TCG E C + + KSC C++ L + + D + + T W S+ + YP S+NLTL L K I+++ ++ P+ IYK E W P+QY++ C+ T+ + AL TD FSDI+ L GG+ + F+ +GR ++ S Q W+ AT+IR++ L +G+ + + + ++ Y++ SD +GG+ C+GHAS ++ D C C+H+T G DCEKC FND+PW AT + + C C+CN S +C FD ++ +G HG C +C DNT G +C++C +FR + + AC PC C VGSLS T CD G+C CKPGV G C C PG+ Sbjct: 31 VRAAMDECADEGGRPQRCMPEFVNAAFNVTVVATNTCG-TPPEEYCVQT--GVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDE---FSDISPLT------------GGN------VAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT--LNRLNTFGDEVFNDPKVLKS--YYYAISDFAVGGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTG--HGGHCTNCRDNTDGAKCERCRENFFR-----LGNTEACSPCHCSPVGSLS-TQCDSY-GRCSCKPGVMGDKCDRCQPGF 432 HSP 2 Score: 76.2554 bits (186), Expect = 9.918e-14 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 848 PLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEE-FNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSG-TPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 P G + I+ + + C TAGK CE C + F D S+ +R +C+ C+CN++ D N R+ G C+ C NT G CD+C G+F P + CK C C+ G++ + C+ V+G+C C P V+G+ C C PGY Sbjct: 772 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVR---LCRPCQCNDN-----IDPNAVGNCNRLTGE-CLKCIYNTAGFYCDRCKEGFFGNPLAP-NPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGY 921 HSP 3 Score: 62.7734 bits (151), Expect = 1.428e-9 Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPA-VCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHC 1309 +C ++TAG C++C E F P + NPA CK C CN + V +S + C + G C C PGY Y + C+ C CH++GS +G CD +G+C C+PG+TG+ C C Sbjct: 849 KCIYNTAGFYCDRCKEGFFGNPLAP----NPADKCKACACNPYGT-------VQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGY-----YNLQSGQGCERCDCHALGSTNGQ-CDIRTGQCECQPGITGQHCERC 966 HSP 4 Score: 51.6026 bits (122), Expect = 3.666e-6 Identity = 39/139 (28.06%), Postives = 56/139 (40.29%), Query Frame = 2 Query: 905 CECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C C G+ CE C + + + ++ + C C CN HS C + V DC DNT GP C++C+ GY+ + + C+PC C S + P + C G GK C C GY Sbjct: 688 CTCPVGYGGQFCETCLPGYRRE---TPSLGPYSPCVLCTCNGHSETCDPETGV------------CDCRDNTAGPHCEKCSDGYYGDST--LGTSSDCQPCPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGY 809
BLAST of Netrin 1 vs. Ensembl Mouse
Match: Lamc3 (laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]) HSP 1 Score: 206.068 bits (523), Expect = 1.525e-55 Identity = 141/437 (32.27%), Postives = 202/437 (46.22%), Query Frame = 2 Query: 50 ALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVH-ESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPA----------LTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 A ++ +CY G + C P N A EAS TCG E C A C++C+ DP + + D H T W S + YPTSVNLTL L K I+++ ++ P+ IYK + W P+QY++ CQ T+ P + FSDI+ L GG+ + F+ +GR ++ S Q W+ +T+I IS L +G+ + ++ R ++ Y++ SD +GG+ C+GHAS + C CQH+T G DCE+C F D+PW+ T + C C C+ HS +C FD ++ +G HG C C D+T GP C++C Y+R K C+PC CH GSLS CD SG C CKP VTG C C PG+ Sbjct: 26 AAGADMGSCYDGVGRAQRCLPEFENAAFGRRAEASHTCGRP-PEDFCPHVGAP--GAGLQCQRCDDADPGRRHDASYLTDFHSPDDSTWWQSPSMAFGVQYPTSVNLTLSLGKAYEITYVRLKFHTSRPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCTSEFSDISPLN------------GGN------VAFSTLEGRPSAYNFEESPVLQEWVTSTDILIS--LDRLNTFGDDIFKDPRVLQS--YYYAVSDFSVGGRCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFDRELYRSTG--HGGHCQRCRDHTTGPHCERCEKNYYRWSP-----KTPCQPCDCHPAGSLS-LQCDN-SGVCPCKPTVTGWKCDRCLPGF 428 HSP 2 Score: 76.6406 bits (187), Expect = 6.719e-14 Identity = 48/157 (30.57%), Postives = 71/157 (45.22%), Query Frame = 2 Query: 866 ASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNS 1336 A I S D C G+ CE C + F P + P C+RC+C+ + D N + + H C+ C NT G C+ C G++ A + C PC C GS+S C+ V+G+C C P V+G+ C+ C+PG+ S Sbjct: 774 ACATIPESGDVVCTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQP--CRRCQCSGN-----VDLNA-VGNCDPHSGHCLRCLYNTTGAHCEHCREGFYGS-AVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQCVCLPYVSGRDCSRCSPGFYDLQS 921 HSP 3 Score: 59.6918 bits (143), Expect = 1.365e-8 Identity = 43/138 (31.16%), Postives = 61/138 (44.20%), Query Frame = 2 Query: 911 CQHSTAGKDCEKCHEEFNDQPWSSATIRNPA-VCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C ++T G CE C E F + SA P C C C+ +V K+ C+ C G C +C+PG+ Y + C+ C CH +GSL C +G+C C+PGVTG+ C C G+ Sbjct: 846 CLYNTTGAHCEHCREGF----YGSAVATRPVDKCAPCSCD-------LRGSVSEKTCNPVTGQCV-CLPYVSGRDCSRCSPGF-----YDLQSGRGCQSCKCHPLGSLENK-CHPKTGQCPCRPGVTGQACDRCQLGF 965
BLAST of Netrin 1 vs. UniProt/SwissProt
Match: sp|P34710|UNC6_CAEEL (Netrin unc-6 OS=Caenorhabditis elegans OX=6239 GN=unc-6 PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 1.181e-95 Identity = 190/598 (31.77%), Postives = 297/598 (49.67%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-LTP--KEHYG-----NLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQK 1828 C+ G P C P IN A + AS TCG N + CT G + C+ C++ + S + ++ D + G TCW+S S P +V+LTL L K+ ++++++ C PD + +YK W+P+Q+++ +C+ F D + + N + VC M GG+ F + P ++F + S Q+W+ AT+I++ + L+P E YG N E + Y + ++ +GG+ C+GHASR I Y C+C+H+TAG +CE C D+PW AT + C C CN H+ +C FD +F SG G C++C NT G C C PG+ R + P+ H+ ACK C CH VGSL G C+Q SG+C CKPGVTG TC CA GY+Q+ S PC KI + S+ S C C+ KR+N K+FC ++ ++ + SRE W ++ +E V+ R + N++ E TS+W+ V C C G YL++ K + L++N V+ +W++ ++ +F +DK+G+C T + Sbjct: 37 CHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDARNHFQSHPASLLTDLNSIGNMTCWVST---PSLSPQNVSLTLSLGKKFELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQFYSSECRRIFGR-----DPDVSITKSNEQEAVC-TASHIMGPGGNRVAFPFLENRP-SAQNFEN--SPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDVNSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSL-GKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKCRIVPKRLNQKKFCKRDHAVQMVVVSREMVDGWAKYKIVVESVFKRGTE-------NMQRGE-TSLWISPQGVICKCPKLRVGRRYLLLG--KNDSDHERDGLMVNPQTVLVEWEDDIMDKVLRFSKKDKLGQCPEITSHR 611
BLAST of Netrin 1 vs. UniProt/SwissProt
Match: sp|O95631|NET1_HUMAN (Netrin-1 OS=Homo sapiens OX=9606 GN=NTN1 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 1.424e-92 Identity = 185/606 (30.53%), Postives = 299/606 (49.34%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CN+ DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y + SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK +IN K++C K+ +++I + G W +F I V+ Q R+ + + S+W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K GKC + Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVY--KQGTSRIRRGD------QSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKK 603
BLAST of Netrin 1 vs. UniProt/SwissProt
Match: sp|O09118|NET1_MOUSE (Netrin-1 OS=Mus musculus OX=10090 GN=Ntn1 PE=1 SV=3) HSP 1 Score: 301.212 bits (770), Expect = 2.364e-92 Identity = 184/606 (30.36%), Postives = 300/606 (49.50%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CNS DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y++ SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK ++N K++C K+ +++I + G W +F I V+ Q R+ + + S+W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K GKC + Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVY--KQGTSRIRRGD------QSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKK 603
BLAST of Netrin 1 vs. UniProt/SwissProt
Match: sp|Q90922|NET1_CHICK (Netrin-1 OS=Gallus gallus OX=9031 GN=NTN1 PE=1 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.672e-91 Identity = 181/593 (30.52%), Postives = 297/593 (50.08%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAES-ICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G P+ C P +N A ++ SSTCG+ + + TE K + +SC CN+ DPK + + D + TCW S+ + YP +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P+ T N + +C D + GG LI F+ GR + Q+W+ AT+I++++ + +G+ + A + Y + SD+ +GG+ C+GHASR +R DD C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + + CD + SK +IN K++C K+ +++I E W +F I V+ + R ++WVH + C C + YL++ + T + Q+ +I ++S ++ W++TW + +F ++K GKC + Sbjct: 43 CYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTE---KGEEQVRSCHLCNASDPKRAHPPSFLTDLNNPHNLTCWQSDSYVQ--YPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAITKQ-----NEQEAICTDSHTDVRPLSGG------LIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGA-AGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPPTAASSTEEPADCDSYCKASKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRLRRGD--------QTLWVHAKDIACKCPKVKPMKKYLLLGS--TEDSPDQSGIIADKSSLVIQWRDTWARRLRKFQQREKKGKCRK 605
BLAST of Netrin 1 vs. UniProt/SwissProt
Match: sp|Q2HXW4|NET1_PIG (Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 4.901e-91 Identity = 183/600 (30.50%), Postives = 292/600 (48.67%), Query Frame = 2 Query: 41 GLVALNGEL---QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDK 1795 GL G+ C NG P+ C P +N A + SSTCG A ++ + +SC CN+ DPK + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+IR+++ + +G+ + A + Y + SD+ +GG+ C+GHA+R +R DD+ C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GYFR PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + V+ CD + SK +IN K++C K+ +++I + G W +F I V+ + R NL W+ + C C + YL++ N + + Q+ ++ ++S ++ W++TW + +F ++K Sbjct: 27 GLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVS--ERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQ--FPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQ-----NEQEAVCTDSHTDMRPLSGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAF--SRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGASRIRRGDQNL--------WIRSRDIACKCPKIKPLKKYLLLGNAEDSP--DQSGIVADKSSLVIQWRDTWARRLRKFQQREK 597
BLAST of Netrin 1 vs. TrEMBL
Match: A0A0K0EM36 (Uncharacterized protein OS=Strongyloides stercoralis OX=6248 PE=4 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 8.081e-98 Identity = 185/588 (31.46%), Postives = 305/588 (51.87%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVY-------HFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLV--KSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTS-MWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY ++G P C P IN A + ASSTCG NG CT + G + C+ C++ + + ++ D + TCWISE + + +V LT+ L K+ +++I+++ C PD + IYK +W P+Q+++ C M D +T S N + +C + +M F + P +F S Q+W+ AT+IRI + + + + N + + ++ +++ +GG+ C+GHASR I Y C+C+H+TAG DCE+C D+PW+ AT + C C CN H+ KC F+ ++ SG G CI+C NT G C C PGY+R + I H+ ACK C CH VGSLS + C+Q SG+C CKPGVTG+TC CA GY+Q+ + + PC KI + + K+N +CD C+ KR+NF+++C ++ F+ I SRE ++++ IE+V+ +N + + +G++ +W+ + + C C G Y+++ + Q+EL ++ ++ DW ET E+ ++F ++K G+C Sbjct: 9 CYDSSGRPIRCVPDFINAAFGKPVIASSTCGVNGPSRYCTIRENTNGLIREVCDICDNKVKNKAHPASLLTDLNNARNLTCWISEPSIDKN--ENVTLTVSLGKKFELTYISMQFCNKIPDSMAIYKSVDGGKNWIPFQFYSSQC-----MEMYQRDVKDTISPKNEQEAICTN-SHTMSPTASRVAFATLEGRPS---AFRFEQSPILQDWVTATDIRIVFNKPSTFNEQLYAVSDSNNITDDMSGDMIAKSYYSMAELAVGGRCKCNGHASRCIYDKKGQYTCDCKHNTAGNDCERCKPFHYDRPWARATSESANACVACNCNLHARKCRFNAELYRLSGNKSGGICINCRHNTAGRNCHYCKPGYYRDNTKAITHRRACKACGCHLVGSLSKS-CNQTSGQCICKPGVTGQTCNRCAKGYQQSRNPQMPCIKIPTVTQSIIPKNNVNCDKCKVSPKRVNFRKYCKRQHAFQFYIISREILTDYVKYEISIEKVYKKN---------DYKIKKGSNYLWLPEKMAICKCPKLRIGQRYIILGTNNAKNYK-QSELYIDNHSIVVDWSETHVERMARFVRREKNGEC 574
BLAST of Netrin 1 vs. TrEMBL
Match: A0A090LSV4 (Netrin-1a OS=Strongyloides ratti OX=34506 GN=SRAE_X000060400 PE=4 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 8.343e-98 Identity = 187/588 (31.80%), Postives = 302/588 (51.36%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVY-------HFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI--SKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCN 1810 CY ++G P C P IN A + ASSTCG NG C + G + C+ C++ + + ++ D + TCWISE + +V LT+ L K+ +++I+++ C PD + IYK +W P+Q+++ C M D +T S N + +C + +M F + P +F S Q+W+ AT+IRI + + + + N + + ++ +++ +GG+ C+GHASR I Y C+C+H+TAG DCE+C D+PW+ AT + C C CN H+ KC F+ ++ SG G CI+C NT G C C PGY+R + I H+ ACK C CH VGSLS + C+Q SG+C CKPGVTG+TC CA GY+Q+ + + PC KI S + KSN +C+ C+ KR+NF++FC ++ F+ I SRE ++++ IE+V+ +N D ++ + +W+ + + C C G Y+++ + Q+EL +N ++ DW ET E+ ++F ++K G+C+ Sbjct: 9 CYDSSGRPIRCVPDFINAAFGKPVIASSTCGVNGPSKFCAIRENVNGLIREVCDICDNTIKSKAHPASLLTDLNNARNLTCWISEPSINKN--ENVTLTVSLGKKFELTYISMQFCNKIPDSMAIYKSVDNGKNWIPFQFYSSQC-----MEMYQRDVKDTISPKNEQEAICTN-SHTMSPTASRVAFATLEGRPS---AFRFEQSPILQDWVTATDIRIIFNKPSTFNEQLYAITDSNNITDDISNDMIAKSYYSMAELAVGGRCKCNGHASRCIYDKKGQYTCDCKHNTAGNDCERCKPFHYDRPWARATSESANACVACNCNLHARKCRFNAELYRLSGNKSGGICINCRHNTAGRNCHYCKPGYYRDNTKAITHRRACKACGCHLVGSLSKS-CNQTSGQCICKPGVTGQTCNRCAKGYQQSRNPQMPCIKIASSTQNSIPKSNINCEKCKISPKRVNFRKFCKRQHVFQFYIISREIMTDYVKYEISIEKVYKKN--DYKIKK------GPNYLWLPEKMAICKCPKLRIGQRYMILG-TNNDQDNKQSELYINSHSIVVDWTETLVERMARFVKREKNGECD 575
BLAST of Netrin 1 vs. TrEMBL
Match: A0A5K3F5Z3 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 1.610e-97 Identity = 203/695 (29.21%), Postives = 313/695 (45.04%), Query Frame = 2 Query: 71 TCYSANGDPKPCEPLLINLAQPMHIEASSTCGENG-AESICTEWFDKLGKAHKS-CEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPK-------EHYGN----LLLREKRNA-------ENPVYHFGSSDIMIGGQPL---------------------------------------------------CHGHASRIIR-------------TSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI----------------SKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVW--------------TRNQQDPRVSQ-LNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCN 1810 CY A+ C P N+A+ + + A+STCG+ G AE +C W + G+ ++ CE C+S S+ ++ + D HI +TCW+S V S +VNLTL L KR I +I+++ CG PD I +YK W PWQYF+ DC F +P + S N + +C ++ + Y ++ +I F+ GR S +W+ T+++IS P E G +L R R++ + PV+ G + G L C+GHA+R +R + +C+CQH+T G DCE+C + D+PW+ AT + CK C+CNNH+ C+FD N++ KSG G C+ CG NT G C +C G+ R+ + I+ AC+ C CH +GS+ PCD+ +G+C CK GVTG+TC C GYKQT S PC K + + ++ +C C++ +KR FK+FC ++ F+ + S+E+RG+ +R + I VW R Q P + + L TS H C C F+ SYL ++ V F + EL+L+Q I W E W + +F + + G+C+ Sbjct: 44 VCY-ADNKAYLCTPPFTNIAEGIPVVATSTCGQGGRAERVCKSWTSQNGQKRQTYCETCDSRKAATSRGAERLTDRHITSNQTCWVSGKVAPGS---TVNLTLSLGKRFEIFYISLQPCGPLPDSIALYKSSDFGRTWKPWQYFSTDCYRAFGLPTSSEHNAQ-ISSANIQEVLCVAIKPPVKYNAQGQVSNVIAFSTTIGRPTSQSWSPALIDWMTMTDLQISLSRFPARRKSRTVERSGGDNTVVLHRRDRSSGQRRVPQKAPVFRLGGGRLFHQGAELEEMQADGTTLNATASTATNARNEVNTHEIHHDEDDAVYFAFSDIAVGGRCKCNGHANRCVRDRIVEKNAAGEEIVTWGPLRCDCQHNTVGADCERCAPGYLDRPWARATNEDANECKACQCNNHTTSCMFDINIYRKSGGQSGGVCLGCGQNTEGVNCQECIAGFTRRPGHSIFSLAACQECQCHPIGSIGSRPCDRKTGQCHCKTGVTGQTCNRCLDGYKQTRSKITPCVKAVDALVFAGSATRSSPQTSIVGQPTADDACPPCEKNNKRFRFKKFCRRQAVFRATVISQEARGELVRLVIRIHDVWRNKGSLAQRYLPAHVRRNQAPIIPLWVPLTKKPSTSRESH---AVCVCPRFKIDQSYLFISQVYEIPFHERNELLLDQKSTILPWVENWRRRLMRFAIRQERGRCD 730
BLAST of Netrin 1 vs. TrEMBL
Match: V4AN98 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_201560 PE=4 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 3.770e-97 Identity = 185/587 (31.52%), Postives = 302/587 (51.45%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI--SKLRHLVKSNS---SCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCN 1810 CY + +PK C P +N A M + ASSTCG + C DK GK ++C C++ PK SK + D + TCW+SE + YP +V LTL L K+ +++I+++ C PD + IYK W P+QY++ +C+ + K P+ + N + +C + ++D + + F+ +GR + Q+W+ AT+I++ + YG+ E+ E+ Y++ SD +GG+ C+GHAS+ I + C+C+H+TAG DCE+C D+PWS A+ R C C CN H+ +C F+ ++ SG G C+ C NT G C+ C GY+R + PI H+ ACK C CH VG+L G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + +R + + SC C+++S+R++ K+FC ++ + SRE W++F + + R S ++ GT +WV K + C C YL++ K + ++ ++++ V+ WK+ W+ + +F ++ GKC+ Sbjct: 12 CYE-DSNPKRCIPDFVNAAFGMEVVASSTCGSPPSR-YCKSTTDKEGKIIRNCFICDANHPKRKHPSKYLTDLNNPNNLTCWMSEPFVQ--YPNNVTLTLSLGKKYELTYISLQFCSARPDSMTIYKSVDYGKTWIPFQYYSSNCKEMYNKAPSAIV------TKANEQEALCTEAYSNIDPLSGAR----VAFSTLEGRPSAYAFDHSPVLQDWVTATDIKV--VFNKLNTYGDEEKDEEGARES--YYYSLSDFAVGGRCKCNGHASQCIPLKNGRLGCDCKHNTAGDDCERCKPFHYDRPWSRASAREANECVACNCNLHARQCRFNMELYTLSGYKSGGVCLKCRHNTAGRNCNYCKEGYYRDRSKPITHRKACKACDCHPVGAL-GKTCNQTTGQCPCKDGVTGLTCNRCAKGYQQSKSPIAPCIKIPVTDMRGPNRQPTQEDSCKKCKKRSRRLSIKKFCRRDFAIHAQVVSREKVDDWVKFTINVLNSYKRG-----TSPIDRARRGGTYLWVPKKDLQCKCPKIRLSRRYLIVGKHKRND--SRSGFVIDRKSVVIRWKDKWQRRLRRFVKHERRGKCH 572
BLAST of Netrin 1 vs. TrEMBL
Match: A0A0N5C6U6 (Uncharacterized protein OS=Strongyloides papillosus OX=174720 PE=4 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 3.993e-97 Identity = 187/587 (31.86%), Postives = 298/587 (50.77%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPT-SVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVY-------HFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-SKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY ++G P C P IN A + ASSTCG NG C G + C+ C+ S + ++ D + TCWISE S P SV LT+ L K+ +++I+++ C D + IYK +W P+Q+++ C M ++ +T S N + +C + S+ F + P +F S Q+W+ AT+IRI + + ++ + N + + ++ +++ +GG+ C+GHASR I Y C+C+H+TAG DCE+C D+PW+ AT + C C CN H+ KC F+ ++ SG G CI+C NT G C C PGY+R + I H+ ACK C CH VGSLS + C+Q SG+C CKPGVTG+TC CA GY+Q+ + + PC KI S ++K+N C+ C+ KR+NFK+FC ++ F+ I SRE ++++ IE+++ +N R +W+ + + C C G Y+++ ++ ++EL +N ++ DW ET E+ ++F ++K G C Sbjct: 9 CYDSSGRPIRCVPDFINAAFGKPVIASSTCGVNGPSKFCAIRESANGLIREVCDICDGAIKSKSHPASLLTDLNNARNLTCWISE---PSINPNESVTLTVSLGKKFELTYISMQFCNRIADSMAIYKSVDGGKNWIPFQFYSSQC-----MEVYGRESKDTISPKNEQEAICTN-SHSLSPTASRVAFATLEGRPS---AFRFEQSPILQDWVTATDIRIVFNKPSAMNEQLYVISDSNNITDEISNDMIAKSYYSMAELAVGGRCKCNGHASRCIYDKKGQYTCDCKHNTAGNDCERCKPFHYDRPWARATSESANACVACNCNLHARKCRFNGELYRLSGNKSGGICINCRHNTAGRNCHYCKPGYYRDNTKAITHRRACKACGCHIVGSLSKS-CNQTSGQCICKPGVTGQTCNRCAKGYQQSRNPQTPCIKIPSPQEGVLKNNVVCEKCKVSPKRVNFKKFCKRQHAFQFYIISREIVADYVKYEISIERIFKKNDYKIR--------KGAQFLWLPEKMAICKCPKLRTGQRYIILGTNNLRDYK-RSELYINNHSIVVDWSETHVEKLARFGRREKNGDC 573
BLAST of Netrin 1 vs. Ensembl Cavefish
Match: NTN1 (netrin 1 [Source:HGNC Symbol;Acc:HGNC:8029]) HSP 1 Score: 300.827 bits (769), Expect = 2.949e-93 Identity = 182/592 (30.74%), Postives = 293/592 (49.49%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISE-GVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSD-DTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS-----SCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G + C P +N A + ASSTCG G C + DK + ++C C++ DPK + + D + TCW SE GV + +V LTL L K+ +++++V+ C PD + I+K W P+Q+++ C+ F P T N + VC D G L+ F+ GR + Q+W+ AT++R+++ L + + + + SD+ +GG+ C+GHASR ++ D C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S CD + SK +IN K++C K+ +V+I + G+W +F I V+ Q + R+ + + +WV V C C + G YL++ N + + GQ+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 37 CYDEHGAARRCIPDFVNAAFGKEVRASSTCGLKGPSRYCAQ--DKGEEGARTCHTCDASDPKRAHPGSYLTDLNNPHNLTCWQSETGVQ--ALQGNVTLTLSLGKKFEVTYVSVQFCSKRPDSMAIFKSMDYGKTWVPFQFYSTQCRKVFNRPNRAAITKQ-----NEQEAVCTDAHAD----GRPLSGGLVAFSTLDGRPSAHDFDNSPVLQDWVTATDVRVTF--------SRLTAPGEPDEDEDSLFYAVSDLQVGGRCKCNGHASRCVKERDTGGLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREAHECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTTASSPEEPADCDSYCKASKGKLKINMKKYCKKDYAVQVHILKSDKAGEWWKFTVNIISVY--KQGESRIRRGD------QLLWVRAKDVACKCPKIKTGKKYLLLGNDEDSP--GQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 596
BLAST of Netrin 1 vs. Ensembl Cavefish
Match: ntn1b (netrin-1-like [Source:NCBI gene;Acc:111191060]) HSP 1 Score: 297.745 bits (761), Expect = 9.912e-92 Identity = 182/592 (30.74%), Postives = 292/592 (49.32%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDT-YQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVS-QLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY NG P+ C P +N A + ASSTCG A C ++ + + C C++ DPK + + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ F P+ T N + VC D M GG LI F+ GR + Q+W+ AT++R+++ + +G+ + A + Y + SD+ +GG+ C+GHAS+ ++ D CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R I H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI S+ CD + SK ++ K++C K+ +V++ + G+W +F I V+ + + R QL +WV V C C + G YL++ + + GQ+ ++ ++ ++ WK+ W + +F +DK GKC Sbjct: 57 CYDENGQPRRCIPDFVNAAFGKEVRASSTCGAQTAARYCVV-TERGEERSRECHTCDAADPKKAHPAAYLTDLNNPHNLTCWQSESYVQ--HPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCKKMFNRPSRAAITKQ-----NEQEAVCTDSHTDMRPLAGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDVRVTF--SRLHTFGDENEDDSELARDS-YFYAVSDLQVGGRCKCNGHASKCVKDRDGGGLVCECKHNTAGAECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKAISHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTATYTSAEEPTDCDSHCKASKGKMKVTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGEHRIRRGDQL---------LWVRAKDVACKCPKIKPGKKYLLLGS-DDDDSRGQSGVVADKGSLLIPWKDLWARRLRKFQQRDKRGKC 620
BLAST of Netrin 1 vs. Ensembl Cavefish
Match: NTN1 (netrin 1 [Source:HGNC Symbol;Acc:HGNC:8029]) HSP 1 Score: 301.212 bits (770), Expect = 1.323e-91 Identity = 182/592 (30.74%), Postives = 293/592 (49.49%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISE-GVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSD-DTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS-----SCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G + C P +N A + ASSTCG G C + DK + ++C C++ DPK + + D + TCW SE GV + +V LTL L K+ +++++V+ C PD + I+K W P+Q+++ C+ F P T N + VC D G L+ F+ GR + Q+W+ AT++R+++ L + + + + SD+ +GG+ C+GHASR ++ D C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S CD + SK +IN K++C K+ +V+I + G+W +F I V+ Q + R+ + + +WV V C C + G YL++ N + + GQ+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 214 CYDEHGAARRCIPDFVNAAFGKEVRASSTCGLKGPSRYCAQ--DKGEEGARTCHTCDASDPKRAHPGSYLTDLNNPHNLTCWQSETGVQ--ALQGNVTLTLSLGKKFEVTYVSVQFCSKRPDSMAIFKSMDYGKTWVPFQFYSTQCRKVFNRPNRAAITKQ-----NEQEAVCTDAHAD----GRPLSGGLVAFSTLDGRPSAHDFDNSPVLQDWVTATDVRVTF--------SRLTAPGEPDEDEDSLFYAVSDLQVGGRCKCNGHASRCVKERDTGGLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREAHECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTTASSPEEPADCDSYCKASKGKLKINMKKYCKKDYAVQVHILKSDKAGEWWKFTVNIISVY--KQGESRIRRGD------QLLWVRAKDVACKCPKIKTGKKYLLLGNDEDSP--GQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 773
BLAST of Netrin 1 vs. Ensembl Cavefish
Match: NTN1 (netrin 1 [Source:HGNC Symbol;Acc:HGNC:8029]) HSP 1 Score: 237.269 bits (604), Expect = 3.340e-68 Identity = 154/584 (26.37%), Postives = 260/584 (44.52%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISE-GVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDT-YQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G + C P +N A + ASSTCG G C + DK + ++C C++ DPK + + D + TCW SE GV + +V LTL L K+ +++++V+ C PD + I+K W P+Q+++ C+ F P T N + VC D G L+ F+ GR + Q+W+ AT++R+++ L + + + + SD+ +GG+ C+GHASR ++ D C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R + PI H+ ACK + + +P + +CK GK +IN K++C K+ +V+I + G+W +F I V+ Q + R+ + + +WV V C C + G YL++ N + + GQ+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 214 CYDEHGAARRCIPDFVNAAFGKEVRASSTCGLKGPSRYCAQ--DKGEEGARTCHTCDASDPKRAHPGSYLTDLNNPHNLTCWQSETGVQ--ALQGNVTLTLSLGKKFEVTYVSVQFCSKRPDSMAIFKSMDYGKTWVPFQFYSTQCRKVFNRPNRAAITKQ-----NEQEAVCTDAHAD----GRPLSGGLVAFSTLDGRPSAHDFDNSPVLQDWVTATDVRVTF--------SRLTAPGEPDEDEDSLFYAVSDLQVGGRCKCNGHASRCVKERDTGGLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREAHECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKEIPVAPPTTTASSPEEPADCDSYCK-ASKGKL------------------------------------------KINMKKYCKKDYAVQVHILKSDKAGEWWKFTVNIISVY--KQGESRIRRGD------QLLWVRAKDVACKCPKIKTGKKYLLLGNDEDSP--GQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 723
BLAST of Netrin 1 vs. Ensembl Cavefish
Match: ntn1b (netrin-1-like [Source:NCBI gene;Acc:111191060]) HSP 1 Score: 232.261 bits (591), Expect = 1.245e-67 Identity = 158/584 (27.05%), Postives = 263/584 (45.03%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDT-YQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVS-QLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY NG P+ C P +N A + ASSTCG A C ++ + + C C++ DPK + + + D + TCW SE + +P +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ F P+ T N + VC D M GG LI F+ GR + Q+W+ AT++R+++ + +G+ + A + Y + SD+ +GG+ C+GHAS+ ++ D CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GY+R I H+ ACK + V T T+ S + P +S C + K K + K++C K+ +V++ + G+W +F I V+ + + R QL +WV V C C + G YL++ + + GQ+ ++ ++ ++ WK+ W + +F +DK GKC Sbjct: 57 CYDENGQPRRCIPDFVNAAFGKEVRASSTCGAQTAARYCVV-TERGEERSRECHTCDAADPKKAHPAAYLTDLNNPHNLTCWQSESYVQ--HPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCKKMFNRPSRAAITKQ-----NEQEAVCTDSHTDMRPLAGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDVRVTF--SRLHTFGDENEDDSELARDS-YFYAVSDLQVGGRCKCNGHASKCVKDRDGGGLVCECKHNTAGAECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKAISHRRACK------------------------EIPVASPTATY--------TSAEEP----------TDCDSHCKASKGKMK-VTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGEHRIRRGDQL---------LWVRAKDVACKCPKIKPGKKYLLLGS-DDDDSRGQSGVVADKGSLLIPWKDLWARRLRKFQQRDKRGKC 570
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009682.1 (pep scaffold:Pmarinus_7.0:GL479835:738:11671:-1 gene:ENSPMAG00000008750.1 transcript:ENSPMAT00000009682.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 156.377 bits (394), Expect = 8.950e-43 Identity = 101/324 (31.17%), Postives = 162/324 (50.00%), Query Frame = 2 Query: 395 ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTF-------------KMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGR--SFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 I+++ ++ P+ IYK S W+P+QY++ C+ T+ + L TD FSDI+ L GG+ + F+ +GR ++ S Q+W+ +TEIR++ L +G+ + + + + Y++ SD +GG+ C+GHAS ++ C+C+H+T G DCEKC +ND+PW AT + C C+CN + +C FD ++ +G HG C +C DNT G C++C ++R+ A C PC C+ VGS S CD+ G+C CK GV G+ C C PG+ Sbjct: 6 ITYVRLKFHTSRPESFAIYKRASMDGPWTPYQYYSGSCEPTYGKRNRGFLRSGDDEQTPLCTDE---FSDISPLT------------GGN------VAFSTLEGRPSAYNFDNSPVLQDWVTSTEIRVT--LNRLNTFGDEVFNDHKVLRS--YYYAISDFAVGGRCKCNGHASECVKNELGALACKCRHNTMGADCEKCLPLYNDRPWHRATSESANECTLCDCNGRADECYFDPELYRATG--HGGHCTNCRDNTDGKTCERCLENFYRRSA-----SEHCLPCNCNPVGSYS-RQCDE-QGRCSCKQGVMGERCDQCLPGF 295
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004606.1 (pep scaffold:Pmarinus_7.0:GL477874:5526:15188:-1 gene:ENSPMAG00000004198.1 transcript:ENSPMAT00000004606.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 100.138 bits (248), Expect = 1.969e-24 Identity = 61/211 (28.91%), Postives = 100/211 (47.39%), Query Frame = 2 Query: 395 ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPAL----------TTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKN---EQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSAT 988 I+++ + P+ IYK S W P+Q+++ C+ TF +P+ T + FSDI+ L GG+ + F+ +GR N +Q W+ AT++R+S L +G+ + + + + Y++ SD+ +GG+ CHGHAS R SD C CQH+T G DCE+C N +PW+ A+ Sbjct: 8 ITYVRLRFHTSRPESFAIYKRTSPASPWQPYQFYSGTCERTFGLPSRGFLRAGDEERTALCSDEFSDISPLT------------GGN------VAFSTLEGRPGALAFDGNDKLQQEWVTATDVRVS--LRRLNTFGDEVFGDPKVLRS--YYYAVSDLAVGGRCKCHGHASECGRGSDGRLVCRCQHNTTGDDCERCLPSHNSRPWAQAS 196
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004614.1 (pep scaffold:Pmarinus_7.0:GL477874:5547:15173:-1 gene:ENSPMAG00000004198.1 transcript:ENSPMAT00000004614.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 98.2117 bits (243), Expect = 7.790e-24 Identity = 63/209 (30.14%), Postives = 100/209 (47.85%), Query Frame = 2 Query: 395 ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPAL----------TTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQG--RSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSA 985 I+++ + P+ IYK S W P+Q+++ C+ TF +P+ T + FSDI+ L GG+ + F+ +G S G LS Q W+ AT++R+S L +G+ + + + + Y++ SD+ +GG+ CHGHAS R SD C CQH+T G DCE+C N +PW+ A Sbjct: 3 ITYVRLRFHTSRPESFAIYKRTSPASPWQPYQFYSGTCERTFGLPSRGFLRAGDEERTALCSDEFSDISPLT------------GGN------VAFSTLEGLFHSTGP-LSSATQEWVTATDVRVS--LRRLNTFGDEVFGDPKVLRS--YYYAVSDLAVGGRCKCHGHASECGRGSDGRLVCRCQHNTTGDDCERCLPSHNSRPWAQA 188
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008925.1 (pep scaffold:Pmarinus_7.0:GL476496:30277:70426:-1 gene:ENSPMAG00000008054.1 transcript:ENSPMAT00000008925.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 103.99 bits (258), Expect = 3.666e-23 Identity = 88/346 (25.43%), Postives = 141/346 (40.75%), Query Frame = 2 Query: 395 ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFA---KDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISY--ILTPKEHYGNLLLREKRNAENPV---YHFGSSDIMIGGQPLCHGHASRIIRTSD-DTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNV------FLKSGRIHGSS-CIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPC-----------DQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPC 1351 ++++ V+ G I + + + PWQY++ +C + + + V D + +C + K+ + GR D S ++ +A IR+ I T L R+ R + V Y++ DI +GG +C GHAS D +C+C+H+T G++C+ C +N + W TI N C++C C+ + C +D V GR G C++C NT G C+ C G++R C+ C C GSLS C D G+C C+PG G+ C CA Y+ K PC Sbjct: 5 VAYVIVKAANSPRPGNWILERSLDGATYHPWQYYSVSDSECLTRYGITPTVGNPVYRRDD----EVICTSYYVVLLMLARGKIHTSL----INGRPSADDPSPKLLDFTSARYIRLRLQRIRTLNADLMTLSHRDPREVDPIVTRRYYYSIKDISVGGMCICSGHASTCPWNEDTQKMECQCEHNTCGENCQHCCPGYNQRRWRPGTINNGNTCEKCNCHGKTEDCYYDAEVDRTNRSLSVHGRFSGGGVCVNCSANTAGTNCETCRDGFYRPTGVLPNDPYPCRLCQCDPQGSLSQV-CIKDEKHADPEKDLSPGQCLCRPGFAGERCERCAFAYRGYPDCK-PC 340 HSP 2 Score: 71.2478 bits (173), Expect = 4.647e-13 Identity = 53/191 (27.75%), Postives = 82/191 (42.93%), Query Frame = 2 Query: 848 PLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRI---HGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKN----PCRKISKLRHLVKSNSSC 1399 P CH R + T D +C G CE+C ++F +P S C+RCECN + GR+ C+ C + T G C++CA G++ C+PC CH G+ + CD+++G+C C+P V G+TC CA G+ +S PC + ++ C Sbjct: 692 PTCH-QDPRGVLTCD-----QCLPGYIGLRCERCADDFFGEPSSPG-----GSCRRCECNGNEEA--------WGGGRVCDARTGQCLRCRERTAGFHCERCADGFYGDAT----GTGGCQPCQCHPEGA-TAPQCDRINGQCPCRPSVVGRTCEQCAIGFYGLSSGAGCSPCPCHPVGTAGVACSADGRC 858 HSP 3 Score: 58.151 bits (139), Expect = 5.955e-9 Identity = 47/143 (32.87%), Postives = 66/143 (46.15%), Query Frame = 2 Query: 896 TYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 T QC C+ TAG CE+C + F + AT C+ C+C+ + RI+G C + VG C+QCA G+ Y + C PC CH VG+ +G C G+C C PGV G++C C G+ Sbjct: 756 TGQCLRCRERTAGFHCERCADGF----YGDAT--GTGGCQPCQCHPEGA-------TAPQCDRINGQ--CPCRPSVVGRTCEQCAIGF-----YGLSSGAGCSPCPCHPVGT-AGVAC-SADGRCHCWPGVEGRSCDRCTSGH 876
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007784.1 (pep scaffold:Pmarinus_7.0:GL477336:382472:417638:1 gene:ENSPMAG00000007035.1 transcript:ENSPMAT00000007784.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 92.4337 bits (228), Expect = 1.172e-19 Identity = 77/305 (25.25%), Postives = 128/305 (41.97%), Query Frame = 2 Query: 254 PKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTS-VNLTLGLKKRSL-ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKM----PALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNE-QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPV--YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCEC--QHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSG---RIHGSSCIDCGDNTVG 1126 P++S ++ + + T W+S P V +++ L+ S + ++ V+ P+G+ I + + W WQ FAKDC + M P D+VN C + + F ++ P + + Q ++ A E+R+ +L + LL A P+ YH S++++ G+ CHGHA R +S Y+C C Q +T G +CE C F D+PW + RN C+ C C ++ C ++ + G R G C DC NT G Sbjct: 71 PRVSPHARPLSHVNDDDASTVWVSAPSPGPGQPPPSVAVSIELRGGSYQVFYVIVQFLSPQPEGVRIQRRPAAGSPWVDWQVFAKDCVSMYNMSKNGPLEKPDSVN-----------CLQFPREVPLSRGNVTFSVLTPEPNLRPGYNAFYATPALQAFVLAAEVRV--LLEGR------LLGVAGVAGGPLRPYH-AVSEVIVSGRCECHGHAERC-DSSTTPYRCLCSAQSNTEGPNCELCRPLFRDKPWRAGDTRNQNACRPCLCYGRALSCRYEAILDPHPGLHWRGGGGVCQDCTQNTTG 354 HSP 2 Score: 50.8322 bits (120), Expect = 9.386e-7 Identity = 35/102 (34.31%), Postives = 48/102 (47.06%), Query Frame = 2 Query: 1076 GRIHGSSCID-------CGDNTVGPQCDQCAPGYFRQHAYPIYHKNA--CKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCR 1354 GR +G++ D C G C C PG +Y + NA C+PCLC G+ GT CD SG+C C PG G+ C+ C G+ + + CR Sbjct: 591 GRTNGTAGCDARTGRRHCKALASGSLCSLCRPG-----SYNLSETNAAGCEPCLCDPQGTEFGTVCDGSSGQCACLPGWAGRRCSTCQAGFYRLEGDASGCR 687
BLAST of Netrin 1 vs. Ensembl Nematostella
Match: EDO36836 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SHI5]) HSP 1 Score: 234.958 bits (598), Expect = 2.540e-69 Identity = 166/594 (27.95%), Postives = 266/594 (44.78%), Query Frame = 2 Query: 62 ELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFD--LEKSMDYGGDEKLFRLIPFNPRQGRSFGDVL--SKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS------SCDFCQRKSKRINFKRFCSKETNFKVNIKSRESR--GQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 + + CY+ + C+P +LA + S TCGE + C + +C C+ + K S +K + D H TCW ++ V +V L L K I++++++ CG PD + IYK W +Q+++ C+ KM T+ S N +C D L + + YGG I F+ +GR + S Q W+ AT+I++ + N++ R R ++ ++ S+ +GG+ C+GHAS + + C+C+H+T G DC C FND+PW AT + CK C CN H+ CVF +F SG G C+ C NT G C C G+++ I H C+ C CH GS G C+Q +G+C CK GV G++C CAPGYK T S PC + + +S++ C C+R ++ KRFC K+ KV + E + W+R I ++ + S+ +W+ K C C + G SY + N++ + ++LN V+ W E ++ +F + C Sbjct: 1 QAKDCYNEFNRAQLCQPAFHDLAYNKDVYVSHTCGEK-SRRFCPPMSVR---GRTACGFCDERNAKTSHPAKYLTDVHNENNVTCWQADPVQSRE---NVTLILSFGKTYDITYVSLQFCGIRPDSMGIYKSMDYGKSWQAYQFYSSRCE---KMYGRVTN--GEISPENEQVALCTDGHLLRPL-YGGR------IAFSTLEGRPSASKMDYSAVMQEWVMATDIKVEF---------NMISRSARPRDS--LYYAVSEFNVGGRCHCNGHASECVSDRNGRQVCDCKHNTVGVDCGACRPFFNDRPWRPATHHSANECKMCNCNLHARTCVFSMELFKLSGGRSGGVCVKCRHNTAGRYCHYCREGFYKDPNKHITHIKVCRQCNCHPHGS-RGRVCNQSTGQCPCKEGVVGRSCDKCAPGYKSTKSNIVPCIETPNVVMSQESSTPRSRDQGCSQCRRVPLKV--KRFCRKDFALKVTVVRVEKKLPNSWVRATVNINTLF-------KRSRTRRVRRGDGYVWIKKRDFRCRCPKLKPGRSYFIAGNLRGQS--RKRSIVLNGRSVVLPWNEKLLKRIYRFIKLQRNNNC 552
BLAST of Netrin 1 vs. Ensembl Nematostella
Match: EDO36523 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SIF3]) HSP 1 Score: 191.43 bits (485), Expect = 3.197e-51 Identity = 161/579 (27.81%), Postives = 249/579 (43.01%), Query Frame = 2 Query: 59 GELQT-CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDI-NSLKPVCFDLEKSMD-YGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRT----SDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY---------------KQTNSLKNPCRKISKL---RHLVKSNSSCDFCQRKSKRINFKR-------FCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFM 1699 G+LQ CY + G + C P N A + +++TCG+ + C + + + K CE CNS DP L + + D T W SE + E+ V LTL L K +S+I + P+ + IYK + + W P+QYF+ C+ T+ + T N D N +C D ++ G F + P +F + S Q W+ A +RI L +G+ + + + Y++ D+ IGG+ C+GHAS T QC+CQH T G DCE+C +ND+PW+ A+ RN C RC CN + CVFD ++ ++G HG C +C NT GP C++C ++R+ + C C C+ VGS+S C+ G+C CKPGVTG C C Y T+ K C + + RH+V + C C+ + FC + SR F + +E N Q +++ + S++ LV G +G ++ M V T + M Sbjct: 15 GQLQIQCYDSQGRAQRCMPQFGNAAFGKRVISNNTCGDP-PKKFCVQ--TGVLEVRKECEMCNSSDPALEHPALKITDIKDDTNRTWWQSETLLENP-DKPVTLTLDLGKSYDVSYIRIRFRSPRPESMAIYKKTTPSSKWIPYQYFSATCEKTYGV------TTNGIVDPRNQQVALCTDAFSTITPLTGGNVAFSTLEDRP-DAYNFDN--SPALQEWVTAVAVRIH--LRRMNTFGDEVFGDPNVLRS--YYYAIIDLSIGGRCKCNGHASECEETRLWDGQTRLQCKCQHDTEGVDCERCKPLYNDRPWARASSRNANECVRCNCNGLAESCVFDEALYRQTG--HGGRCQNCKQNTDGPNCERCKENFYRKTSL-----EPCVACGCNPVGSVS-LQCNS-EGQCRCKPGVTGIKCDKCQANYFGFSQTGCRPCQCFGPGTDPAKTQCNEKGECTCKRHVV--GAKCTLCRSGYFGLEASNPHGCKQCFCYGHSTVCKAAPGYTSRNITTDFTTGLEGWAVENDQGDSAGFVSVTAIGKESLFARASLVYIGNRRSSYGQTFGFMFRVGTVDGM 565 HSP 2 Score: 61.6178 bits (148), Expect = 9.030e-10 Identity = 52/175 (29.71%), Postives = 73/175 (41.71%), Query Frame = 2 Query: 866 ASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTV-GP--QCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGT--------PCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKN--PC 1351 +R I+ + +C G C+ C + + P P C++C C+ + D N R+ G C+ C NT GP QC+ CA GY+ + Y K CK C C+ G++S PCD G+C C P V+G C C P Y S K PC Sbjct: 758 GTRCIQIGANVVCTDCPEGHVGNLCDMCQDGYYGDPMGKRGA--PTTCQKCNCSGN-----IDPNAIGSCDRLTGD-CLKCIHNTRNGPISQCELCAIGYYGNATH--YPKPQCKACECYVQGTVSPPGHDPTLPFPCDD-KGRCTCLPNVSGDKCDTCRPEYWNVASGKGCEPC 921 HSP 3 Score: 50.0618 bits (118), Expect = 3.369e-6 Identity = 41/154 (26.62%), Postives = 68/154 (44.16%), Query Frame = 2 Query: 860 GHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 GH + DD +C C + +G C+ C E+ W+ A+ + C+ C C+ ++ + +G+ H C G +CDQC+ ++ + + C C C+ GSL+ T CD+ G C C+PGV G C C + Sbjct: 876 GHDPTLPFPCDDKGRCTCLPNVSGDKCDTCRPEY----WNVASGKG---CEPCNCDTTG---SWNNTCSVTTGQCH------CKPGVTGRRCDQCSIDHY------AFSELGCLACNCNLQGSLNVT-CDE-QGVCQCRPGVLGIKCDSCQENF 1005
BLAST of Netrin 1 vs. Ensembl Nematostella
Match: EDO39502 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9X8]) HSP 1 Score: 168.318 bits (425), Expect = 1.614e-43 Identity = 126/436 (28.90%), Postives = 195/436 (44.72%), Query Frame = 2 Query: 68 QTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICT-EWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDS-HIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGD-EKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRII------RTSDDTY-QCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQ--------VSGKCFCKPGVTGKTCTHCAPGY 1321 ++CY A GD LL+ + I ASSTCG G E C G H + +P+ S K ++ S R K+ W SE E+ Y L L L+ + + + P G++I + W ++YF+ DC F P + D+ +C + +++ + E +FR + + + S QN L T IRI++ T G+ LL + R Y++ D++I G C+GHA + + T Y +C C H+T GK+CE+C + + D PW A NP C++C CN H++KC FD V+ SG + G C DC NTVG C++C P +++ + +AC C C G ++G C+ V+G+C CK V G C C G+ Sbjct: 21 RSCYPATGD------LLV--GRENKIYASSTCGLRGPEEYCVVSNLQDYGDCHICDSRPYQTNPQFSHVPKYMLSSFDGRKKDEWWQSENGRENVY-----LQLDLESEFHFTHLIMRFRTFRPAGMVIERSWDYGKKWQIYRYFSADCDKIF--PGIPKGEPKDIDDV-----ICTNKYSTVEPSTNGEVIFRAL----KSQIPIKNAYSSKVQNLLKITNIRINF--TKLHTLGDDLL-DPRPEIKRKYYYAVYDLVIRGSCSCYGHAEQCLPEPGQPTTPGMVYGRCNCTHNTTGKNCERCQDGYFDVPWRPADADNPNECRKCNCNGHAVKCRFDPAVYQASGNVSGGVCQDCEHNTVGRNCERCKPLHYQDPSKKFSDPDACIACNCDPTGGVNGGECEAKNDPAAGLVAGRCICKRNVGGVRCDRCKAGF 429 HSP 2 Score: 74.3294 bits (181), Expect = 1.093e-13 Identity = 54/160 (33.75%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 854 CHGHASRIIRTSDDTYQC-ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSS-CIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLC-HSVGSLSGTPCDQVSGKCF-CKPGVTGKTCTHCAPGY 1321 C+GHAS + T C +CQH+T GK+CE C F + AT P CKRC+C S F + ++ + S C C G QC++CA GY+ P+ +CKPC C +++ CD+++G C C G C C PGY Sbjct: 852 CYGHASSC---NPKTGVCVDCQHNTVGKNCEACAVGF----YGIATKGTPNDCKRCQCPGGSSGNKFSESCYVDTSTTPPSVLCDKCQVGYTGRQCEECADGYY---GNPLVPGGSCKPCSCNNNIDPTVSGNCDRLTGSCLQCLYNTAGFNCERCKPGY 1001 HSP 3 Score: 66.6254 bits (161), Expect = 2.363e-11 Identity = 46/140 (32.86%), Postives = 62/140 (44.29%), Query Frame = 2 Query: 908 ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSG--TPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 +CQ G+ CE+C + + P CK C CNN+ D V R+ GS C+ C NT G C++C PGYF C C+C G+ G C+ +G+C C P V GK C CA G+ Sbjct: 930 KCQVGYTGRQCEECADGYYGNPLVPG-----GSCKPCSCNNN-----IDPTVSGNCDRLTGS-CLQCLYNTAGFNCERCKPGYFGDAI-----ARNCTSCVCDKKGTNPGFHYSCNHKTGQCNCLPDVEGKQCDRCAEGF 1053 HSP 4 Score: 49.2914 bits (116), Expect = 5.359e-6 Identity = 47/156 (30.13%), Postives = 61/156 (39.10%), Query Frame = 2 Query: 896 TYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHK---NACKPCLCHSVGS-----------LSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 T QC+C++ +G+ C C P +C+ C C H+ C V C+DC NTVG C+ CA G+ Y I K N CK C C S S TP + K C+ G TG+ C CA GY Sbjct: 820 TGQCQCRNWASGRQCSLCPPNMWGFP----------LCRPCRCYGHASSCNPKTGV-----------CVDCQHNTVGKNCEACAVGF-----YGIATKGTPNDCKRCQCPGGSSGNKFSESCYVDTSTTPPSVLCDK--CQVGYTGRQCEECADGY 947 HSP 5 Score: 48.9062 bits (115), Expect = 7.217e-6 Identity = 54/219 (24.66%), Postives = 79/219 (36.07%), Query Frame = 2 Query: 854 CHGHASRIIRTSDDTYQC----------ECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCEC------NNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGS-------------------------------LSGTP-----------------CDQVSGKCFCKPGVTGKTCTHCAPG 1318 C+GHA + R YQ +C+H+T G++CE+C P S +P C C C N + D L +GR CI C N G +CD+C G+F + + CK C C+ +G+ LS TP CD+ +G+C C+ G+TG+ C G Sbjct: 322 CNGHAVKC-RFDPAVYQASGNVSGGVCQDCEHNTVGRNCERCKPLHYQDP--SKKFSDPDACIACNCDPTGGVNGGECEAKNDPAAGLVAGR-----CI-CKRNVGGVRCDRCKAGFFN---LTTDNPDGCKACGCNPLGTIGECNPDTGRCTCKRYVEGEDCDRCASEYWGLSSTPAGCSNCACDVGGSYDNQCDKQTGQCRCRKGITGRQCERVKTG 528
BLAST of Netrin 1 vs. Ensembl Nematostella
Match: EDO46759 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNY2]) HSP 1 Score: 126.716 bits (317), Expect = 2.933e-30 Identity = 94/333 (28.23%), Postives = 148/333 (44.44%), Query Frame = 2 Query: 395 ISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRL---IPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRII-----RTSDDTYQCECQHST--AGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRI---HGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSG-TPCDQV-SGKCFCKPGVTGKTCTHCAPGYKQTNSLKNP 1348 I F+ + G P+ I+I + + PWQYFA DCQ +F M N + +N C ++ + Y F+L IP P S +++ A+ +RI + Y + L++ +++ +F +++ G+ CHGHA ++ +S +CEC ST G+ CE C +N++ + T +P C +CECNNH+ C ++ ++ G CI+C NT G C C +FR+ + + C PC C G +G T C +V SG C CK V TC C GY +S NP Sbjct: 334 IFFVIMVFYGPPPEAILIERSRDRGSTYEPWQYFASDCQSSFGME-------NNGNLVNPDSINCIQYQRPLPYSSATIAFKLERSIPARPFGAPCSNLYCSTRFLDFIKASNVRI-------QLYNHTLIQNEKHR-----YFALKRVLVTGRCECHGHAQKVTFIKGNSSSPGRCRCECDPSTFTQGEKCESCLPMYNNKAFLRGTNDDPYPCVKCECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLSAVDVCSPCQCTGPGVETGKTSCARVSSGNCTCKKYVREPTCGQCMKGYFNLSS-SNP 646 HSP 2 Score: 54.6842 bits (130), Expect = 9.313e-8 Identity = 42/144 (29.17%), Postives = 60/144 (41.67%), Query Frame = 2 Query: 911 CQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSG--TP-----CDQVSGKCFCKPGVTGKTCTHCAPGY 1321 C H+TAG+ C C ++F +P S + + VC C+C ++ R+ +C C P C QC GYF + + C+ C C+ G+L G TP C +GKC C V G C C Y Sbjct: 565 CLHNTAGQFCHVCRDDFFREPGKSLSAVD--VCSPCQCTGPGVE-----TGKTSCARVSSGNCT-CKKYVREPTCGQCMKGYFNLSSS---NPEGCQACNCNPKGTLGGDRTPAGELECSGSNGKCACLTNVQGLRCDKCVSAY 697
BLAST of Netrin 1 vs. Ensembl Nematostella
Match: EDO36500 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SIF5]) HSP 1 Score: 126.716 bits (317), Expect = 3.996e-30 Identity = 119/445 (26.74%), Postives = 182/445 (40.90%), Query Frame = 2 Query: 44 LVALNGE----LQTCYSAN-GDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISE--------GVHESSYPTSVNLTLGLKKRSLIS-FITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKM-PALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDE-KLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHA---SRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGY 1321 +V LN + +TCY + G PC P ++ ++ S+TCG A+ + + N P + +V K T W S+ G+ P VN+TL KR +S I P + K + W +A C + M P D N F K C + +Y G E + ++ F + D + Q++L+ T++R+ + G LL + N +Y + S++ + G+ C+GHA S I + +CEC+H+T G DCE C FN++PW A + C+ C CNNH+ CV +N L G C C NT G C C ++R + PI H NAC + T +Q+ G+C CKP V G+ C C PG+ Sbjct: 18 VVCLNSQNTCRFETCYERDTGRATPCMPFTSFMSLTRNVTTSNTCGTTRAKYCELPGPEPCYYCDANSSNSNEQHPVTNLVDNELVLPFYAQKYTWWQSQTWWETNQLGLSSIENPPKVNITLSFGKRYQLSGHIKATFYSKRPKAMCFDKSNDFGHTWETLLCYAWRCDRFYNMEPQSNPDPANPF------KLYCTE-----EYSGHEPRKLGIVEFIASKRYEICDYFNPEVQDYLSVTDVRLRLEYPASD--GMELLYQDEQTLNKLY-YAISNVEVTGRCSCNGHAMGCSGPIMSR----RCECEHNTMGTDCEMCEPLFNNRPWMRANQTHGNECQECNCNNHATSCV--YNETLGYGL-----CKGCQHNTQGDHCQNCTAKHYRDLSKPINHVNACLGITNNGSCLTQATDTEQI-GQCSCKPNVYGRRCDQCIPGH 436 HSP 2 Score: 60.8474 bits (146), Expect = 1.705e-9 Identity = 48/153 (31.37%), Postives = 69/153 (45.10%), Query Frame = 2 Query: 902 QCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFL--KSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSL--SGTPCDQVSGKCFCKPG--VTGKTCTHCAP-GYKQTNSL 1339 + EC + G CE C E + QP C C CN+ S C + V K G HG C C +N GP+C +C P Y+ K+ CK C C+ G+L + + CDQ +G+C C + G+ C C Y +++SL Sbjct: 1073 RAECHRNYTGLSCEVCAEGYTRQPMGGTPFDR---CVLCSCNDRSRFCHPETGVCTDCKIG-THGYRCELCTNNVQGPECVRCKPQYWG------LSKDGCKACDCNLPGTLYSNTSVCDQTTGQCSCNATLHIGGQLCDRCEENAYNKSDSL 1215
BLAST of Netrin 1 vs. Ensembl Medaka
Match: NTN1 (netrin-1 [Source:NCBI gene;Acc:101155405]) HSP 1 Score: 303.138 bits (775), Expect = 5.166e-94 Identity = 179/592 (30.24%), Postives = 297/592 (50.17%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G+P+ C P +N A ++ SSTCG+ + +K + ++C C++ DPK + D + TCW SE + YP +V LTL L K+ +++++++ C P+ ++IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+I++ + + +G+ + A + Y + SD+ +GG+ C+GHASR ++ D + C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S+ C+ + SK +IN K++C K+ +V+I + G+W +F I V+ + + R L WV V C C + G YL++ N + + Q+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 38 CYDEHGNPRRCIPDFVNAAFGKEVKVSSTCGKTPSRYCVVTSAEKGEERTRNCHSCDASDPKKYHPPAYLTDLNNPHNLTCWQSENFIQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVIYKSMDNGKTWVPFQFYSTQCRKMYNKPNRAVITKQ-----NEQEAVCTDSHTDMYPLTGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKV--VFSRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASRCVKDRDGSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVSPPTTPASSTEEASDCESYCKASKGKLKINMKKYCKKDYAVQVHILKADKMGEWWKFTVNIISVYKQGESRIRRGDQFL--------WVRAKDVACKCPKIKPGKKYLLLGNDEVSP--SQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 602
BLAST of Netrin 1 vs. Ensembl Medaka
Match: ntn1b (netrin-1 [Source:NCBI gene;Acc:101161061]) HSP 1 Score: 295.819 bits (756), Expect = 2.745e-91 Identity = 184/591 (31.13%), Postives = 291/591 (49.24%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVS-QLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY NG+P+ C P +N A + SSTCG N A C +K + + C C+S DPK + + D + TCW SE + YP +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + T + N + +C D M GG LI F+ GR + Q+W+ AT+I++ I + +G+ + A + Y + SD+ +GG+ C+GHAS+ ++ + CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GYFR + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + + S CD + SK +I K++C K+ +V++ + G+W +F I V+ + + R QL +WV V C C + G YL++ + G + ++ ++ ++ WK+ W + +F +DK GKC Sbjct: 40 CYDENGNPRRCIPDFVNSAFGKDVRVSSTCG-NPAARFCVV-SEKGEERTRDCHTCDSNDPKKAHPPAYLTDLNNPHNLTCWQSETYVQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKSWVPFQFYSTQCKKMY-----NRQNKATITKQNEQEAICTDSHTDMHPLTGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKV--IFSRLHTFGDENEDDSELARDS-YFYAVSDLQVGGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYFRDMSKPISHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTSTYSSYEEPSDCDSYCKASKGKMKITMKKYCKKDYAVQVHVLKGDKAGEWWKFTVNIISVYKQGRHRIRRGDQL---------LWVRAKDVACRCPKIKPGRKYLLLGT--DDDSPGHSGVVADKGSLLIPWKDLWGRRLRKFQQRDKRGKC 600
BLAST of Netrin 1 vs. Ensembl Medaka
Match: ntn1b (netrin-1 [Source:NCBI gene;Acc:101161061]) HSP 1 Score: 295.819 bits (756), Expect = 3.298e-91 Identity = 184/591 (31.13%), Postives = 291/591 (49.24%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI-----SKLRHLVKSNSSCDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVS-QLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKC 1807 CY NG+P+ C P +N A + SSTCG N A C +K + + C C+S DPK + + D + TCW SE + YP +V LTL L K+ +++++++ C P+ + IYK W P+Q+++ C+ + T + N + +C D M GG LI F+ GR + Q+W+ AT+I++ I + +G+ + A + Y + SD+ +GG+ C+GHAS+ ++ + CEC+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C GYFR + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + + S CD + SK +I K++C K+ +V++ + G+W +F I V+ + + R QL +WV V C C + G YL++ + G + ++ ++ ++ WK+ W + +F +DK GKC Sbjct: 41 CYDENGNPRRCIPDFVNSAFGKDVRVSSTCG-NPAARFCVV-SEKGEERTRDCHTCDSNDPKKAHPPAYLTDLNNPHNLTCWQSETYVQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKSWVPFQFYSTQCKKMY-----NRQNKATITKQNEQEAICTDSHTDMHPLTGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKV--IFSRLHTFGDENEDDSELARDS-YFYAVSDLQVGGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYFRDMSKPISHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTSTYSSYEEPSDCDSYCKASKGKMKITMKKYCKKDYAVQVHVLKGDKAGEWWKFTVNIISVYKQGRHRIRRGDQL---------LWVRAKDVACRCPKIKPGRKYLLLGT--DDDSPGHSGVVADKGSLLIPWKDLWGRRLRKFQQRDKRGKC 601
BLAST of Netrin 1 vs. Ensembl Medaka
Match: NTN1 (netrin-1 [Source:NCBI gene;Acc:101155405]) HSP 1 Score: 291.582 bits (745), Expect = 6.911e-90 Identity = 177/592 (29.90%), Postives = 290/592 (48.99%), Query Frame = 2 Query: 74 CYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CDFCQRKSK---RINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 CY +G+P+ C P +N A ++ SSTCG+ C++ DPK + D + TCW SE + YP +V LTL L K+ +++++++ C P+ ++IYK W P+Q+++ C+ + P T N + VC D M GG LI F+ GR + Q+W+ AT+I++ + + +G+ + A + Y + SD+ +GG+ C+GHASR ++ D + C+C+H+TAG +C++C D+PW AT R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R + PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI ++S+ C+ + SK +IN K++C K+ +V+I + G+W +F I V+ + + R L WV V C C + G YL++ N + + Q+ ++ ++ ++ W++TW + +F ++K GKC + Sbjct: 38 CYDEHGNPRRCIPDFVNAAFGKEVKVSSTCGKT----------------------CDASDPKKYHPPAYLTDLNNPHNLTCWQSENFIQ--YPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVIYKSMDNGKTWVPFQFYSTQCRKMYNKPNRAVITKQ-----NEQEAVCTDSHTDMYPLTGG------LIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKV--VFSRLHTFGDENEDDSELARD-SYFYAVSDLQVGGRCKCNGHASRCVKDRDGSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVSPPTTPASSTEEASDCESYCKASKGKLKINMKKYCKKDYAVQVHILKADKMGEWWKFTVNIISVYKQGESRIRRGDQFL--------WVRAKDVACKCPKIKPGKKYLLLGNDEVSP--SQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKCKK 580
BLAST of Netrin 1 vs. Ensembl Medaka
Match: ntn2 (netrin-3 [Source:NCBI gene;Acc:101160359]) HSP 1 Score: 281.182 bits (718), Expect = 1.942e-85 Identity = 175/619 (28.27%), Postives = 296/619 (47.82%), Query Frame = 2 Query: 65 LQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMD--YGGDEKLFRLIPFNPRQGRSFGDVLSKNE--QNWLAATEIRISYILTPKEHYGNLLLREKRNA---ENPV--------YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSS-----CD-FCQ--RKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVK-------------TTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNR 1813 L CY G + C P IN A + SS CG + S + ++C+ C++ DP+ + + + D + TCW SE ++ S P +V LTL L K+ I++++++ C P+ + IYK W P+Q+++ C+ + P T T N + +C D + GG LI F+ GR + Q+W+ T+IR+ + P+ +L N ++PV Y + D +GG+ C+GHASR ++ + C+C+H+T G +C++C D+PW A R C C CN H+ +C F+ ++ SGR G C++C NT G C C G++R PI H+ ACK C CH VG+ +G C+Q +G+C CK GVTG TC CA GY+Q+ S PC KI + +S+ C+ +C+ + + +IN K++C K+ +VN+ E+ G W +F + V+ +++ +P N+ +WVH + C C + +LVM + T+ + L+ +++ ++ W++ W + +F ++K GKC++ Sbjct: 34 LDPCYDETGTARRCIPEFINAAFGKEVMVSSVCGRPPSRSCSVVERGDERPSVRTCQICDAADPRRAHPASYLTDLNSAHNLTCWQSENLNTS--PHNVTLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGKTWMPYQFYSSQCRRMYNKPNKATITKQ-----NEQEALCTDGHTDLYPLSGG------LIAFSTLDGRPSSKDFDNSPVLQDWVTVTDIRVVF-GRPQLSREFVLGAGSNNGGRDDDPVAVTSTLSTYFYAVGDFQVGGRCKCNGHASRCLKDKEGKLVCDCKHNTEGPECDRCKPFHYDRPWQRANAREANECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGRPITHRRACKACDCHPVGA-AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVVNPTAVVSSTEEPADCESYCKPVKGNLKINMKKYCKKDYAVQVNVLDMETVGDWAKFSVSLVSVY-KSRGEPLKRGDNI-------LWVHMKDLACKCPKIQMSKKFLVMGGSEGGTGPAAGPGVGATSPGAERVGLVADKNSLVIQWRDVWSRRLRKFQRKEKKGKCSK 629
BLAST of Netrin 1 vs. Planmine SMEST
Match: SMESG000006779.1 (SMESG000006779.1) HSP 1 Score: 404.06 bits (1037), Expect = 5.145e-133 Identity = 219/607 (36.08%), Postives = 333/607 (54.86%), Query Frame = 2 Query: 44 LVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGA-ESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYILTPKEHYGNLLLREKRNAENPVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPA--VCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGT--SMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQKRHVKRRN 1849 L + G +C+S +G K CEP IN+AQ E +STCG+ G+ + IC W+ G C KC+ P+LS++ +V D +I+G ET W+S + + S S+N+T+ L K + +I VE G PD +++YK D W PW YF+ C+ +FKM + S N + P CF + S+ +++PFNP GR+ S+ + W++ T+I IS +LT +KRN ++P H SDI IG + C+GHA +I+ + T C+C H TAG DC +C + NDQPW PA +C+RC CNNH+ +C FD ++ S HGS C+ C +T GP C+ C+PGY+R A+PI H C+ C CH GSL + C+ +G C CK GV GK C C GY+QT S PC +K +L+ + C C + RI F++FC K K++I+S+E G+W RF + ++W R QQ + SQ+NL SE + +WV + C C + + GH+YL++ +K ++ Q ELI+++ DW + W + F +++ GKC+R+ +++H K N Sbjct: 17 LTIIKG-FSSCFSESGRAKFCEPDFINVAQNATFEVTSTCGQKGSTDRICRNWYTSSGLNEGKCLKCDDRIPELSRNISLVFDRNIQGHETVWVSGRIPKFSGIHSINITINLNKLYEVYYIIVEFAGQLPDSMVLYKRDKNGKTWLPWNYFSSSCKKSFKMKRSKPLHIQQRS-FNKISPACFSFKHSVQNITSN--IKVLPFNPMTGRTSLLPNSRLIKEWVSVTDIMIS-LLTDGS--------KKRN-KSPYDHLSISDITIGARSQCYGHAKSLIKKNGTTV-CDCLHKTAGPDCSQCLKTHNDQPWKIIFPSEPAGNICERCFCNNHAEECKFDEKIYKNSSGKHGSRCLHCLHHTTGPHCNSCSPGYYRNRAFPINHPQVCQKCGCHPYGSLPQSYCNPDNGICQCKIGVEGKLCNRCKKGYQQTKSSSTPCAPETK-NNLMATEERCGSCGKNRPRIRFRKFCKKHIMIKISIQSKEIHGEWTRFGVRVLKIW-RIQQSLK-SQVNLYESEYSIYPIWVENADIRCKCPNLQLGHTYLLLTKIKLKNYLNQPELIVDRKSSALDWSDDWIRRLDMFKMREEQGKCDRYQYKRKHSKLMN 605
BLAST of Netrin 1 vs. Planmine SMEST
Match: SMESG000050895.1 (SMESG000050895.1) HSP 1 Score: 395.201 bits (1014), Expect = 1.364e-128 Identity = 206/616 (33.44%), Postives = 329/616 (53.41%), Query Frame = 2 Query: 47 VALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKL-GKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDL---EKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-LTPKE----------HYGNLLLREKRNAEN----PVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQKRHV 1837 V + CY NG P+ C P N+ + + E +STCG NG E IC W+DK +A + C C++ S + D HI +TCW S + E+ VN+T+ LKK + +I +++CG PD I IYK W PWQ+F++DC FKMP T + + + N + +C +L E+ DYG E + +PF+ GR G S++ W+ T++RIS + TP++ ++ L + N N P+ HFG SD+ +GG+ C+GHA+R + +D +C+C H+T G++CE+C + D+PW AT +N VCK C+C NHS KC+F ++ ++ HG C++C NT G CD+CA ++R P+ H AC C CH++GS+ CD+ +G+C+C+ GVTG+TC C GYKQ+NS PC S + + ++ C C K KRI FK+FC +++ F+ S+E G IR+ +I+++W ++ + W++ + V C C E G SYL++ K ++ EL ++ V+ W +WE + +F ++K GKC ++ ++K + Sbjct: 21 VIFESQSSPCY-LNGRPQQCLPSFTNIIENVKAETTSTCGTNGPEQICRNWYDKTTAEARQYCSICDAKHRSYPPSH--ITDRHIPKNQTCWFSGPLQENPGQNEVNITVSLKKSFEVYYIALQICGTLPDSIAIYKSLDFGVSWKPWQFFSQDCYRAFKMPT-TNEQNSQITPANIHEVLCVELKAPERYNDYGQAETV---LPFSTIYGRPSGPPWSQDLVEWMTMTDLRISLMRFTPEKSTPYRLKELYYHTESLPQAPPNLVNHKTEPIVHFGLSDLAVGGRCKCNGHANRCLIDDNDEIKCDCHHNTEGQECERCKSNYLDRPWQRATRQNANVCKLCQCYNHSDKCMFSMGMYKQTRGQHGGVCLECKHNTEGHACDECAAFHYRDITKPVTHPQACTSCKCHTIGSIKQNECDKKTGQCYCRDGVTGQTCDRCKDGYKQSNSTVRPCIPSSGMADMANTSPVCKKCNEKRKRIVFKKFCRRKSVFRATALSKEIHGNMIRYELKIDEIWRVDKNVWEFLPRETPAMHTYRAWINSEDVRCNCPKVELGQSYLILTRAKYYLYLRNKELYIDSRSVMLPWHNSWERRLQKFQKREKRGKCEQYFKKKMKI 629
BLAST of Netrin 1 vs. Planmine SMEST
Match: SMESG000050895.1 (SMESG000050895.1) HSP 1 Score: 393.66 bits (1010), Expect = 5.483e-128 Identity = 204/616 (33.12%), Postives = 329/616 (53.41%), Query Frame = 2 Query: 47 VALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKL-GKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDL---EKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-LTPKE----------HYGNLLLREKRNAEN----PVYHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSEGTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQKRHV 1837 V + CY NG P+ C P N+ + + E +STCG NG E IC W+DK +A + C C++ S + D HI +TCW S + E+ VN+T+ LKK + +I +++CG PD I IYK W PWQ+F++DC FKMP T + + + N + +C +L E+ DYG E + +PF+ GR G S++ W+ T++RIS + TP++ ++ L + N N P+ HFG SD+ +GG+ C+GHA+R + +D +C+C H+T G++CE+C + D+PW AT +N VCK C+CN HS +C F+ +++++ +G CI+C +T G C+ C G+FR P H+ AC C CH++GS+ CD+ +G+C+C+ GVTG+TC C GYKQ+NS PC S + + ++ C C K KRI FK+FC +++ F+ S+E G IR+ +I+++W ++ + W++ + V C C E G SYL++ K ++ EL ++ V+ W +WE + +F ++K GKC ++ ++K + Sbjct: 21 VIFESQSSPCY-LNGRPQQCLPSFTNIIENVKAETTSTCGTNGPEQICRNWYDKTTAEARQYCSICDAKHRSYPPSH--ITDRHIPKNQTCWFSGPLQENPGQNEVNITVSLKKSFEVYYIALQICGTLPDSIAIYKSLDFGVSWKPWQFFSQDCYRAFKMPT-TNEQNSQITPANIHEVLCVELKAPERYNDYGQAETV---LPFSTIYGRPSGPPWSQDLVEWMTMTDLRISLMRFTPEKSTPYRLKELYYHTESLPQAPPNLVNHKTEPIVHFGLSDLAVGGRCKCNGHANRCLIDDNDEIKCDCHHNTEGQECERCKSNYLDRPWQRATRQNANVCKYCDCNLHSYRCYFNSQIYVRNNYTNGGVCINCRHHTTGNNCENCENGFFRNWTKPQEHRAACTSCKCHTIGSIKQNECDKKTGQCYCRDGVTGQTCDRCKDGYKQSNSTVRPCIPSSGMADMANTSPVCKKCNEKRKRIVFKKFCRRKSVFRATALSKEIHGNMIRYELKIDEIWRVDKNVWEFLPRETPAMHTYRAWINSEDVRCNCPKVELGQSYLILTRAKYYLYLRNKELYIDSRSVMLPWHNSWERRLQKFQKREKRGKCEQYFKKKMKI 629
BLAST of Netrin 1 vs. Planmine SMEST
Match: SMESG000076695.1 (SMESG000076695.1) HSP 1 Score: 362.459 bits (929), Expect = 5.598e-116 Identity = 209/659 (31.71%), Postives = 319/659 (48.41%), Query Frame = 2 Query: 41 GLVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGHNPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLIPFNPRQGRSFGDVLSKNEQNWLAATEIRISYI-----LTPKEHYGNLLLREKRNAENPV--------------YHFGSSDIMIGGQPLCHGHASRIIRTSDDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKI---------------SKLRHLVKSNSSCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVWTRNQQDPRVSQLNLESSE---GTSMWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQKRHVK----------RRNFASTYNQYA 1876 + L QT +G C P IN+AQ I +S+CGE + IC W + C C++ S K + D + TCW S V+ VN+++ KK + ++ ++ C PD I IYK W PWQY++K+CQ F +P + + SL P CFDL + G + ++PF+ GR D L K W+ T++RI+ ++ YG L + R + + ++G SD+ +GG+ C+GH+++ I +D C+C+H+T G DC+KC E F+D W A+ NP CKRC+CN HS C F+ NV++K+G+ G C C NT G QC C GY+R P+ H ACK C CH+VGS + CD+ G+CFCK GV G+ C C GY QT S+ PC K SK + + S C C K KRI FK+FC +++ F I+S+E G+ +RF +I++VW + ++SQ E S+ +W+ + V C C + G SYL++ K + EL+L+ V+ W+ +WE + +F T+ KC +F ++K +K +R+F T N ++ Sbjct: 21 AISVLYENKQTTCEFHGKDYYCTPPFINIAQRAKITVTSSCGEILPDDICPHWKYYSSNHFRDCSICDNDRKNSIYSIKSLTDPLNQFNHTCWFSGPVYNQHGLNHVNISIAFKKNFEVFYVALQFCSELPDSITIYKSHDNGKKWIPWQYYSKNCQKAFNLPPTQEFPIQEGLEY-SLSPTCFDLNQKQKDGNLGQAESILPFSSTIGRKMNDTLIK----WITITDLRITLSRFDDQMSSYFDYGKYFLLKHRRGRDILNMSTFSVNDKSMSKVYYGVSDLSVGGRCQCYGHSNKCIINNDGNIVCDCKHNTEGADCDKCKEGFHDLQWERASKLNPFSCKRCQCNLHSQHCKFEKNVYMKTGQKSGGVCRKCQHNTAGNQCHFCDNGYYRDWTKPLSHDLACKKCKCHAVGSTNVNSCDKKLGQCFCKEGVIGRKCDKCKIGYLQTRSMLKPCVKTYDIIESSQTKKSDLNSKYMDMPNTESECKPCDEKRKRIRFKKFCRRDSVFMGVIESKEVHGKMVRFELQIKEVW---RVSGKISQFISEISQEQYAVPLWISHEEVRCDCPNISLGRSYLILMKYKIYHHRHREELLLDSRTVMLQWRPSWERRLQKFQTKANEEKCEKFLQKKSKIKHNRINRVGKNKRSFLLTKNPFS 671
BLAST of Netrin 1 vs. Planmine SMEST
Match: SMESG000006806.1 (SMESG000006806.1) HSP 1 Score: 300.442 bits (768), Expect = 1.962e-92 Identity = 202/660 (30.61%), Postives = 310/660 (46.97%), Query Frame = 2 Query: 59 GELQTCYSANGDPKPCEPLLINLAQPM-HIEASSTCGENGAESICTEWFDKLGKAHKSCEKCNSLDPKLSKSSKMVVDSHIRGKETCWISEGVHESSYPTSVNLTLGLKKRSLISFITVELCGH-NPDGIIIYKMDSETDDWSPWQYFAKDCQLTFKMPALTTDTVNTFSDINSLKPVCFDLEKSMDYGGDEKLFRLI------PFNPRQGRSFGDVLSKNEQNWLAATEIRIS---------------YILTP-----------KEHYGNLL-----LREKRNAENPVYH----FGSSDIMIGGQPLCHGHASRIIRTS-DDTYQCECQHSTAGKDCEKCHEEFNDQPWSSATIRNPAVCKRCECNNHSIKCVFDFNVFLKSGRIHGSSCIDCGDNTVGPQCDQCAPGYFRQHAYPIYHKNACKPCLCHSVGSLSGTPCDQVSGKCFCKPGVTGKTCTHCAPGYKQTNSLKNPCRKISKLRHLVKSNS---SCDFCQRKSKRINFKRFCSKETNFKVNIKSRESRGQWIRFISEIEQVW-------TRNQQDPRVSQLNLESSEGTS----MWVHKDLVDCGCVDFEFGHSYLVMANVKTTEFMGQTELILNQSDVIEDWKETWEEQFSQFYTQDKMGKCNRFTRQKRHVKRRNFASTY 1864 G CYS G C P N+ + M E +STCG+N + IC + H +C C K + S + D H+ T W S+ V+ +VN+T K I +I++ L PD III K W+ W YF+KDC +F + + N +SD + + D + D KL L+ F F S +W++AT IRI+ + P K +Y ++L L++K+ V F +DI IGG+ C+GHA R ++ D+TY C+CQH+TAGKDCE C E F D+ WS AT+ + A CKRC CN HS KC F+ +++ S + G C+ C NT G C QC GY R + P+ H + C C CH +GS+ CDQ + +C CK GV G +C C G++QT S PC + L + + + C C K KRI FK++C K+ V ++SRE G+ RF ++ V+ T D S + S++ MW+ + + C C + G +YLV+ + +++ ++EL+L+Q V W++TWE + +F ++ G C ++ ++R+ +R+ Y Sbjct: 30 GSNSLCYSE-GKAFRCVPPFTNIIENMIPDEITSTCGQNKKQRICVD--------HINCHSC----MKDTHSINYLTDQHLNNNITFWASDFVNHGD---NVNITFSFGKLFEIYYISLVLIPLLEPDSIIISKSIDNGTSWTEWHYFSKDCYRSFGIQPMD---FNHYSD-SKITESTVDQSLTCTSIPDSKLGNLVNSPSVLAFTTNNPNFFSHA-SDQYNSWMSATNIRITLRKSETNFLNSHLDGFTYPPHLKQYFNRIYRKNNYSSILPVNRKLKQKKRNSPSVLKISDFFALADISIGGRCQCYGHAGRCLKNPVDNTYHCDCQHNTAGKDCEMCREGFVDKRWSVATVNSAAECKRCNCNLHSKKCEFNEKLYIVSNKQSGGVCVGCEHNTDGRYCHQCNKGYHRDWSKPLSHHHVCIKCRCHPIGSIYPDVCDQRNSQCTCKTGVGGLSCNRCQKGFQQTKSPITPCVDVIDLHKIPMAQAPENRCQHCNNKRKRIRFKKYCRKDAVLLVTMQSREQHGEMARFEMKVNYVYRIDTSKFTEMHPDFLASMNGIMSNQFIHSTFPMWIKETDLKCKCPSLQLGMTYLVILKLHAIKYLERSELLLDQKSVALPWQKTWERRMKKFSNKEHQGLCEKWKLKRRYYRRQKHTKNY 668 The following BLAST results are available for this feature:
BLAST of Netrin 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Netrin 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Netrin 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Netrin 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Netrin 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Netrin 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023593 ID=SMED30023593|Name=Netrin 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1962bpback to top protein sequence of SMED30023593-orf-1 >SMED30023593-orf-1 ID=SMED30023593-orf-1|Name=SMED30023593-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=629bp ILKFFLKFLILFIGLVALNGELQTCYSANGDPKPCEPLLINLAQPMHIEAback to top Aliases
The feature 'Netrin 1' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|