Protein smg8-like protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023531 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of Protein smg8-like protein vs. Ensembl Human
Match: SMG8 (SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:25551]) HSP 1 Score: 120.168 bits (300), Expect = 5.974e-27 Identity = 71/206 (34.47%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 2223 MPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRI---------------NKVRKQRVKRAFAAG----NFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +P++ SW+L+ GP SY +GL+ GF+ G+N+L+PWD+ ++TR + +R G + +AF+GFE E G RF +GPD +M+ + KE+ L D+PLY + AQLMR++V VP++ L++ + P+V+PGPP P+F P I L P LWVLR P+AY Sbjct: 760 LPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMK--VMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAP-LQIILMPQVQPGPP-PCPVFYPEKQE-ITLPPDGLWVLRFPYAY 960 HSP 2 Score: 66.2402 bits (160), Expect = 2.952e-10 Identity = 31/74 (41.89%), Postives = 40/74 (54.05%), Query Frame = 3 Query: 1554 PEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 PE RN P + H S + ACNCGR+Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 590 PEADRNP-PVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAP 662 HSP 3 Score: 62.7734 bits (151), Expect = 3.166e-9 Identity = 37/139 (26.62%), Postives = 58/139 (41.73%), Query Frame = 3 Query: 1023 RNWFKACHKLYNLFCSEK------------------FRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLP 1385 + W A KLY + K + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q C H+ H LP Sbjct: 446 QKWISAASKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLP 584
BLAST of Protein smg8-like protein vs. Ensembl Human
Match: SMG8 (SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:25551]) HSP 1 Score: 120.168 bits (300), Expect = 5.974e-27 Identity = 71/206 (34.47%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 2223 MPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRI---------------NKVRKQRVKRAFAAG----NFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +P++ SW+L+ GP SY +GL+ GF+ G+N+L+PWD+ ++TR + +R G + +AF+GFE E G RF +GPD +M+ + KE+ L D+PLY + AQLMR++V VP++ L++ + P+V+PGPP P+F P I L P LWVLR P+AY Sbjct: 760 LPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMK--VMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAP-LQIILMPQVQPGPP-PCPVFYPEKQE-ITLPPDGLWVLRFPYAY 960 HSP 2 Score: 66.2402 bits (160), Expect = 2.952e-10 Identity = 31/74 (41.89%), Postives = 40/74 (54.05%), Query Frame = 3 Query: 1554 PEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 PE RN P + H S + ACNCGR+Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 590 PEADRNP-PVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAP 662 HSP 3 Score: 62.7734 bits (151), Expect = 3.166e-9 Identity = 37/139 (26.62%), Postives = 58/139 (41.73%), Query Frame = 3 Query: 1023 RNWFKACHKLYNLFCSEK------------------FRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLP 1385 + W A KLY + K + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q C H+ H LP Sbjct: 446 QKWISAASKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLP 584
BLAST of Protein smg8-like protein vs. Ensembl Human
Match: SMG8 (SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:25551]) HSP 1 Score: 88.9669 bits (219), Expect = 1.037e-18 Identity = 61/220 (27.73%), Postives = 88/220 (40.00%), Query Frame = 3 Query: 1116 FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q H VH +S+ S + P E N P + H S + ACNCGR+Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 38 FSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQ---HCVHKF-----------------------------------------------HSLPKSGEKP--EADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAP 205
BLAST of Protein smg8-like protein vs. Ensembl Human
Match: SMG8 (SMG8 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:25551]) HSP 1 Score: 61.2326 bits (147), Expect = 8.141e-9 Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 3 Query: 1116 FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLP 1385 F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q C H+ H LP Sbjct: 495 FSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLP 584
BLAST of Protein smg8-like protein vs. Ensembl Celegans
Match: smg-8 (pep chromosome:WBcel235:II:14441435:14447219:1 gene:WBGene00010551.1 transcript:K04B12.3b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:smg-8) HSP 1 Score: 97.4413 bits (241), Expect = 2.728e-20 Identity = 104/415 (25.06%), Postives = 162/415 (39.04%), Query Frame = 3 Query: 1590 HCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQML-PRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYS-GFVHGSNFLLPWDVPLKTR-------INKVRKQRVKRAFAAGN-----FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVN-----GLLTRDVPLYFPCQCSTY---LAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 H + ++S C CGR+Q R +PF KEAN FY+ CC R R + E+K D + + + + L+ D L +L P S TS S DD + S + ++ P+ D + A+ + ++ Q E G P T +P +PSW+L G Y+H +GL+ F G ++L P V L +NK+R + R N VK F+GFE EC GHRFF+ + S S+ ++E+ + +L D+P+ PC C AQL +++V P + + + I PKV P ++ G + P+EL ++L LP Y Sbjct: 454 HDASNTMISTCVCGRKQLIRPEPFSVKEANSDFYDHPDFKCCRRLWRYQFQLYQEDS--------------------EEKDDIMWADRESNSLRAAKKMAQREDELAEEDTDLDIPESLLDPDS-----TSPSDEDDVRVRTMSSSESSSQESDAYLRPTSRRDESMASKTERELTIDHVKRMQKLELAGKSEDFLITVPNSMTT-----GKLPIFPSWHLTSLGDSSIYSHGAGLKNQPNFKIGGDYLSPVVVLLDVNFDVWNRDLNKIRSEDFSRKCGKDNKDDSARVKLFVGFEYECSRGHRFFVDYNGEPLIYSKGSNVIRESAHRSSLGNVLQADLPIRRPCTCRKLPLQSAQLQKVHVVTPKAP-VHITIDPKVL--IPTHEGVYGTGQE-PLELHHSKYYILHLPTVY 834
BLAST of Protein smg8-like protein vs. Ensembl Celegans
Match: smg-8 (pep chromosome:WBcel235:II:14441409:14447219:1 gene:WBGene00010551.1 transcript:K04B12.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:smg-8) HSP 1 Score: 97.0561 bits (240), Expect = 3.136e-20 Identity = 104/415 (25.06%), Postives = 162/415 (39.04%), Query Frame = 3 Query: 1590 HCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQML-PRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYS-GFVHGSNFLLPWDVPLKTR-------INKVRKQRVKRAFAAGN-----FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVN-----GLLTRDVPLYFPCQCSTY---LAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 H + ++S C CGR+Q R +PF KEAN FY+ CC R R + E+K D + + + + L+ D L +L P S TS S DD + S + ++ P+ D + A+ + ++ Q E G P T +P +PSW+L G Y+H +GL+ F G ++L P V L +NK+R + R N VK F+GFE EC GHRFF+ + S S+ ++E+ + +L D+P+ PC C AQL +++V P + + + I PKV P ++ G + P+EL ++L LP Y Sbjct: 456 HDASNTMISTCVCGRKQLIRPEPFSVKEANSDFYDHPDFKCCRRLWRYQFQLYQEDS--------------------EEKDDIMWADRESNSLRAAKKMAQREDELAEEDTDLDIPESLLDPDS-----TSPSDEDDVRVRTMSSSESSSQESDAYLRPTSRRDESMASKTERELTIDHVKRMQKLELAGKSEDFLITVPNSMTT-----GKLPIFPSWHLTSLGDSSIYSHGAGLKNQPNFKIGGDYLSPVVVLLDVNFDVWNRDLNKIRSEDFSRKCGKDNKDDSARVKLFVGFEYECSRGHRFFVDYNGEPLIYSKGSNVIRESAHRSSLGNVLQADLPIRRPCTCRKLPLQSAQLQKVHVVTPKAP-VHITIDPKVL--IPTHEGVYGTGQE-PLELHHSKYYILHLPTVY 836
BLAST of Protein smg8-like protein vs. Ensembl Celegans
Match: smg-8 (pep chromosome:WBcel235:II:14444909:14447219:1 gene:WBGene00010551.1 transcript:K04B12.3c.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:smg-8) HSP 1 Score: 80.1073 bits (196), Expect = 1.121e-15 Identity = 61/203 (30.05%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 2223 MPRYPSWNLMDSGPYFSYTHSSGLEYS-GFVHGSNFLLPWDVPLKTR-------INKVRKQRVKRAFAAGN-----FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVN-----GLLTRDVPLYFPCQCSTY---LAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +P +PSW+L G Y+H +GL+ F G ++L P V L +NK+R + R N VK F+GFE EC GHRFF+ + S S+ ++E+ + +L D+P+ PC C AQL +++V P + + + I PKV P ++ G + P+EL ++L LP Y Sbjct: 120 LPIFPSWHLTSLGDSSIYSHGAGLKNQPNFKIGGDYLSPVVVLLDVNFDVWNRDLNKIRSEDFSRKCGKDNKDDSARVKLFVGFEYECSRGHRFFVDYNGEPLIYSKGSNVIRESAHRSSLGNVLQADLPIRRPCTCRKLPLQSAQLQKVHVVTPKAP-VHITIDPKVL--IPTHEGVYGTGQE-PLELHHSKYYILHLPTVY 318
BLAST of Protein smg8-like protein vs. Ensembl Fly
Match: CG6729 (gene:FBgn0032296 transcript:FBtr0080119) HSP 1 Score: 159.458 bits (402), Expect = 1.558e-39 Identity = 129/448 (28.79%), Postives = 204/448 (45.54%), Query Frame = 3 Query: 1575 LPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALP------ENTRNVPINV--PEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHG----MESLSP---SDLSLS-------------QTNQMLPRSRRTLETSVSS--TDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPLKTRINKVRKQRVKRAFAAGNF-----------VKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC---STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 +P KH S V +S+CNCGR QG R DPF+ ++ANY FYE + ++C C + + P + R P + G G P+ E+ + E+ + LSP SDL++S + Q+L + T + SS TD+ L+ E QE K ++++ D G + + S PG+ T+++ + +P +PSW+L GP Y+H++GL+ SGF+ G+NFLLPWDV L R+ KQ+ ++ +K F+G E EC GHRF + PD +++G + +E + ++ ++PLY+PC C + +LAQLMRI+V P + + + + PKV G FT GS P L W++RLP+ Y+ Sbjct: 481 VPHEKHNSGVIHISSCNCGRTQGRREDPFNLRQANYEFYEHIAQMCNLCVKVKQYQFPIFEPSVSDYRAAAFEAAFPLLNNGKSGAPQDEDAEEDEAEEEEGQEQEQPTEEQLQNTASNCCSQPLSPTFGSDLNMSIAGFGASLKESQASSEQLLNSEQNTTSSGTSSADTDNELVVELQEPAKKEARE-------DAGPAHAVSTST-----------------------TEYLPGLVHTVSNFGL-LPLFPSWSLACVGPSSIYSHNTGLQEHFQSGFLSGANFLLPWDVQL--RLVHAPKQQYQQQHHGKKQQRWKKQGDRLSLKIFVGMEYECSRGHRFMMCAPDRVLRG--GADIERETCSMVVHNNMPLYYPCPCRSQNNFLAQLMRIHVVTPKAP-VNIIVDPKVCVG----RYTFTMGSIVPPRLSQSAYWIIRLPYVYQ 888
BLAST of Protein smg8-like protein vs. Ensembl Zebrafish
Match: smg8 (SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]) HSP 1 Score: 106.686 bits (265), Expect = 5.658e-23 Identity = 91/300 (30.33%), Postives = 131/300 (43.67%), Query Frame = 3 Query: 1962 RTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRI--------------------NKVRKQR------VKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 R E S DRL +E H A S G +T S+ A Q++ P PGM + + +P++ SW+L+ GP SY +GLE GF+ GS FLLPWDV +++R NK + + R + +AF+GFE E G RF +GPD +++ + KE L D+PLY P + AQL R++V VP++ L++ + P+V+PG P PIF P + L LWVLR P+AY Sbjct: 590 RPGEVPPSGEADRLKEKETSTHTPGESTSLSLALSLGQ----STDSLGTYADGAEGQEKRPSLVDRQPSTVEYLPGMLHSGCPKGL-LPKFSSWSLVKLGPAKSYNSLTGLEQPGFLPGSAFLLPWDVVIRSRSEEDVGSLEPLDGGPASWPAPNKASAGKRGSAGGIGRGRRRDDVARAFVGFEYEDSRGRRFLSSGPDKVVK-VLGQGGPKEPATRCLNSDMPLYIPSPAQGRGIKPHYAQLARLFVVVPDAP-LEIVLNPQVQPGLP-PCPIFHP-EQPEVVLPSDGLWVLRFPYAY 880 HSP 2 Score: 74.7146 bits (182), Expect = 4.600e-13 Identity = 81/361 (22.44%), Postives = 132/361 (36.57%), Query Frame = 3 Query: 498 FDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVF--NVPISPVSAILNQSTSNVVT-----------LRDRIEEKLYAVLKYHNICGSEYS--LAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDN----------------------------NFDYDSICQPDRDIQSAAFGQFL--------TKQIHSFSVTKESSGFGSENISCRNWFKACHKLYNLFCSE--------------KFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLP 1385 FD Y +F ++ LR+K L +K S E N R PRLLFVF N + S + T ++ +E+++Y + + + ++ S L V N FV++ G + LL H N +F+ +S + +FL TK+ SV + E + W A +KLY + + + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+G +L E+ K W+ G Q+CE S+T Q C H+ HLLP Sbjct: 147 FDVSYDRMFRALDALRQKALPLLRAAIKDSPISKEWKLNCRPCPPRLLFVFQMNGALRVGSCMGGNGTDGTGVEKPKKHSPRRRMQHALEDQIYRIFRKSRVLTNQSSNCLFTVPANQAFVYVV--GGPDEDPIGTLLGHLRSNCAFRENEGGTPVPGQRRYQQMRHSNRQPSFNVESSLSSGGQLVDCTLKEFLWQHVELVLTKKGFDDSVGRNPQPSHFELPTYTKWVHAAYKLYQVMIESVEEDAAEISLKVQGQLKVLEGFLDADAKFSENRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLP 505 HSP 3 Score: 66.2402 bits (160), Expect = 1.549e-10 Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 3 Query: 1560 EKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 E +N P + H S + S+CNCGR+Q R DPFD + ANY FY+ + E CC + R+ P + P P Sbjct: 512 EMEHNPPILYHNSRGRSTSSCNCGRKQSPREDPFDIQTANYDFYQMLEEKCCAKLERINFPVFQASTPDPAP 583
BLAST of Protein smg8-like protein vs. Ensembl Xenopus
Match: herc2 (HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:Xenbase;Acc:XB-GENE-1012659]) HSP 1 Score: 117.087 bits (292), Expect = 5.576e-26 Identity = 87/275 (31.64%), Postives = 129/275 (46.91%), Query Frame = 3 Query: 2031 SDSQDESVSAPSDGGD-----GNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTR------------------INKVRKQRVK-RAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYF--PCQ---CSTYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +DS P GGD G+G + S +Q E PGM V L +P++ SW L+ GP SY +GL++ GF+ G+++L+PWD+ ++T+ I R V R + +AF+GFE E G RF +GPD +M+ + KE+ L D+PLY P Q + AQLMR++V VP++ +++ + P+V+PGPP P+F P I L LWVLR PF+Y Sbjct: 626 TDSLGTFPEGPKAGGDNTEASGHGTDEKVEKRPSLVDRQASTVE----------YLPGM-VHLNSPKGLLPKFSSWALVKLGPAKSYNFHTGLDHLGFIPGTSYLMPWDIVIRTKPEDESDLDTNSWPAPNKSIPGKRNSVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKIMKA--IGNGPKESAIKALNTDMPLYMLSPSQGRGLKPHYAQLMRLFVVVPDAP-VQIILAPQVQPGPP-PCPVFVPEKQE-ITLPSDGLWVLRFPFSY 884 HSP 2 Score: 105.145 bits (261), Expect = 2.676e-22 Identity = 114/483 (23.60%), Postives = 176/483 (36.44%), Query Frame = 3 Query: 516 ELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNV-------PIS--PVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEY--SLAKVQTNCPFVFI--------------RLPHGNNLRTFNDL-----------------LSHFIDNNFDYDSICQPDRDIQSAAFGQF---LTKQIHSFSVTKESSGFGSENISCRNWFKACHKLYNLFCSEK------------------FRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 +LF ++ LR+K + LK + L+ N R PRLLF+F + P S P + + S L+ +E+++Y + + + ++ L V N FV+I L H L+ L LS ++NN D ++ F LTK+ SV + E + + W KLY + K + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP L+E+ K W+ G Q+CE S+T Q C H+ HLLP K G KI PE N P + H S + +CNCG++Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 154 KLFRALDSLRQKMLPSLKPSLKDCAVGLDWKLNARPCPPRLLFIFQLNGALKVEPKSQGPQTNEKPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVADEDEDPVNMLLEGLRHNCTLKDTESLVPISGPRRYQMMRHTRQLSFTVENNTSLSGQLV-DCTLREFLFQHVELVLTKKGFDDSVGRNPQPSHFELPTYQKWVSVALKLYEIIIENKDDDPPAFPGGFPPKLLANMKVLEGYLDADTKFSENRCQKALPMAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGPAFHKYAMVLNEDCYKFWSSGHQLCEERSLTDQHCVHKFHLLP--------------------------------------KSGE-----------KIEPE---RNPPILFHNSRARSTGSCNCGKKQAPREDPFDIKSANYDFYQILEEKCCGKLDHITFPIFQPSTPDPAP 583
BLAST of Protein smg8-like protein vs. Ensembl Mouse
Match: Smg8 (smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:1921383]) HSP 1 Score: 120.939 bits (302), Expect = 3.011e-27 Identity = 72/206 (34.95%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 2223 MPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRI---------------NKVRKQRVKRAFAAG----NFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +P++ SW+L+ GP SY +GL+ GFV G+N+L+PWD+ ++TR + +R G + +AF+GFE E G RF +GPD +M+ + KE+ L D+PLY + AQLMR++V VP++ L++ + P+V+PGPP P+F P I L P LWVLR P+AY Sbjct: 760 LPKFSSWSLVKLGPAKSYNFHTGLDQQGFVPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMK--VMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAP-LQIILMPQVQPGPP-PCPVFYPEKQE-ITLPPDGLWVLRFPYAY 960 HSP 2 Score: 88.1965 bits (217), Expect = 3.383e-17 Identity = 67/269 (24.91%), Postives = 100/269 (37.17%), Query Frame = 3 Query: 1023 RNWFKACHKLYNLFCSEK------------------FRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 + W A KLY + K + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q H VH + +S+ S + P E N P + H S + ACNCGR+Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 446 QKWISAAAKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQ---HCVH-----------------------------------------------KFHSLPKSGEKP--EADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAP 662
BLAST of Protein smg8-like protein vs. Ensembl Mouse
Match: Smg8 (smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:1921383]) HSP 1 Score: 88.9669 bits (219), Expect = 7.676e-19 Identity = 61/220 (27.73%), Postives = 88/220 (40.00%), Query Frame = 3 Query: 1116 FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 F + C+ AL +A + Y+ LP Y+ VH + A ++ A+GP +L E+ K W+ G Q+CE S+T Q H VH +S+ S + P E N P + H S + ACNCGR+Q R DPFD K ANY FY+ + E CC + + + P + P P Sbjct: 38 FSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQ---HCVHKF-----------------------------------------------HSLPKSGEKP--EADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAP 205
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Match: sp|B0W730|SMG8_CULQU (Protein SMG8 OS=Culex quinquefasciatus OX=7176 GN=CPIJ003128 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.812e-48 Identity = 223/837 (26.64%), Postives = 334/837 (39.90%), Query Frame = 3 Query: 519 LFSQVNILRKKYKSLTENELKTISNSLEVVNNG-------RLVQPRLLFVFNVPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNIC--GSEYSLAKVQTNCPFVFI---RLPHGNNLRTFNDLLSHFI--------DNNFDYDSICQPDRDIQSAAFGQFLTKQIHS-----FSVTKESSGFGSEN-----------------ISCRNW---FKACHKL----------------YNLFCSEKFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDN--SIGD-SVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPL-------------KTRINKVRKQRVKRAFAAGNF-VKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-STYLAQLMRIYVAVPNSNLLKLFIQPKVR--PGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 +F + I+R+KY LK + L+ N G RL PR +F F S I + + L +EE++Y +L+ I S SL + + FVF + N L DLL ++ D++ D S +P +A+ +K+ ++ KE E+ S + W FK HK+ Y F + D + RF F + CE L +A +YKD LP YS H +K + A ++ A+GP + +KL + C++I W QQ Y + +R N ++G VK P E H S V VSACNCGR QG R DP+ ++ NY FY+ + + C C RV P V E ++ E I+ K NL ++ + SP LS SQ +Q S L S+ D EE + K +Q E + N + + +QP+ PGM + A +P++PSW+L+ GP YTH+SG+ SGF+ G+NFLLPWDV + K R K + K + ++ F +K FLG E EC GHRF ++GPD +++G S V+++ + ++ D+P+YFPC C S+ +AQLMR++V P + + + ++PKVR G FT G PI+L W+LRLPF YE Sbjct: 147 IFKSLKIIREKYV------LKFLPKLLKSSNLGNYMGKEARLCSPRFIFFF----EGTSNIKPEDVEKLDGLECSVEEEIYKMLRNEFIITNNSAMSLFSIPRSKKFVFYNSDKRAKSNPLADSIDLLMKYLNKPAGGQNDDDEDLMSRLRPYDGYGMSAWSVGKSKRAEKKERSILALLKEHVAEAFEHGFDDSASKYRGRGHFVIPSFKTWYEGFKLLHKIFIDNPSNSSYETNDPDYKAFLQNFHKIID--IDERF--FAEICEHGLELAMVNYKDMLPHHYSSTFHEKKYEQAHELFTRYARGPEVERHEQKL-----------KDYCDSI----------------------------WLNGKQQCEYPS------------------LRGNPCALGKHKVKDPTE----------HSSGVIFVSACNCGRTQGHREDPYTIRQGNYDFYQIIAKSCSSCNVLERVKFP---------VFEPSSNDFRAAEFIN--KNLSNLMSFEHSNRTPDASTHPPMTNENSPH-LSGSQKSQ---DSASNLTFSMDEKRD----EENKSQKFGTQGEDEDETLEQETVNEIVIKVGEHSEDKAILRQPSTT--------EYLPGM-LHAASPAGLLPQFPSWSLVCLGPSSIYTHNSGIPEHVQSGFLSGANFLLPWDVSVRLEHAQSWAASYEKIRNRKKNTSQPKSSESSNTFTLKIFLGVEYECLRGHRFIMSGPDTVLRGGSGS-IVRDSGSKVVFNDMPIYFPCPCRSSNIAQLMRVHVVTPKAP-VNVIVEPKVRILQGTTQNCLTFTTGLTEPIKLSQSAYWILRLPFIYE 872
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Match: sp|Q17G65|SMG8_AEDAE (Protein SMG8 OS=Aedes aegypti OX=7159 GN=AAEL003157 PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.026e-45 Identity = 162/577 (28.08%), Postives = 252/577 (43.67%), Query Frame = 3 Query: 1116 FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDN--SIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSM-PRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPLK--------TRINKVRKQR-----VKRAFAAGNF-VKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-STYLAQLMRIYVAVPNSNLLKLFIQPKVR--PGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 FF CE + +A +YK+ LP YS H +K + AR++ L A+GP + KL + C++I W QQ Y + +R N ++G + + N P M H S V VSACNCGR QG R DP+ ++ANY FY+ + + C C R+ P V E ++ E I+ K NL + + SP LS SQ +S+ + S DD+ EE+++ +++ + +D I Q + P PGM A +P+ + P++PSW+L+ GP YTH+SGL SGF+ GSNFLLPWDV ++ K+R ++ K + ++ NF +K F+G E EC GHRF ++GPD +++G S V+++ + ++ D+P+YFPC C ++ +AQLMR+++ P + + + ++PK + FT G PI+L W+LRLPF YE Sbjct: 395 FFADVCEHGMELAMVNYKEMLPHHYSGTFHEKKYQQARELFLRYARGPEVEKHELKL-----------KDYCDSI----------------------------WLNGKQQCEYPS------------------LRGNPCALG--------KHKANDP-MDHSSGVVFVSACNCGRTQGHREDPYTIRQANYEFYQLIAKSCSNCTLLERIKFP---------VFEPSSSDFRAAEFIN--KNLSNLMSLENSNRTPDTGTHPPMTNDHSPH-LSGSQ------KSQDSASNLTFSIDDK------EENETHAKNYASQGDADEALEQENLNEIVIKVGEHADQTDKEKAILRQPSTTEYLPGM--LHATSPIGLLPQFPSWSLVCLGPSSIYTHNSGLPEHIQSGFLSGSNFLLPWDVSVRLEHAQSWAASYEKIRNRKKNVSQSKSSDSSNNFTLKIFIGIEYECLRGHRFIMSGPDTVLRG--GSGIVRDSGSKVVFNDMPIYFPCLCRNSNVAQLMRVHIVTPKAP-VNVILEPKAKIFQNNMQSNFTFTTGQPEPIKLTQSAYWILRLPFVYE 876
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Match: sp|B3MJV4|SMG8_DROAN (Protein SMG8 OS=Drosophila ananassae OX=7217 GN=GF14070 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.712e-41 Identity = 140/447 (31.32%), Postives = 218/447 (48.77%), Query Frame = 3 Query: 1539 SVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALP------ENTRNVPINV--PEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSP---SDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDG-NGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPLK-TRINKV---------------RKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC---STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 S++ P ++P KH S V +S+CNCGR QG R DPF+ ++ANY FYE + ++C C + + P + R + P + TG P+ E + + D D E+ + ++ + LSP SDL++S + +S ++ ++E E S S+ ES ++ + D N I PA R++ PT GG PG+ T++D + +P +PSW+L GP Y+H++GL+ SGF+ G+NFLLPWDV L+ NK +KQ+ + +K F+G E EC GHRF + PD +++G + ++ N ++ ++PLY+PC C S YLAQLMRI+V P + + + + PKV G FT G+ P L W+LRLPF Y+ Sbjct: 467 SLRSQPCTLPKDVPHDKHNSGVIHISSCNCGRTQGRREDPFNLRQANYDFYELIAQICNLCVKVKQYQFPIFEPSVSDYRAAAFDAAFPMLNTGKICTPQG-EDENEDGETEEADEDTEEKEQAEGDNCSQQLSPTFGSDLNMS------------IAGFGASLNE---SQESSEQLSGSEHESPNSGTSSADTENELVLQIKEPA---RKESTPT--GGFSTSTTEYLPGLVHTVSDFGL-LPLFPSWSLACVGPSSIYSHNTGLQEHFQSGFLSGANFLLPWDVLLRLVHANKHHQQHHHNMHLQQHPGKKQQRWKKQGDRLSIKIFVGMEYECSRGHRFMMCAPDRVLRG--GADIERDTCNKVVHSNMPLYYPCPCRSQSNYLAQLMRIHVVTPKAP-VNIIVDPKVCVG----KYTFTLGTIIPPRLSQSAYWILRLPFVYQ 884
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Match: sp|B4GH42|SMG8_DROPE (Protein SMG8 OS=Drosophila persimilis OX=7234 GN=GL17013 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.208e-41 Identity = 131/443 (29.57%), Postives = 208/443 (46.95%), Query Frame = 3 Query: 1539 SVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALP--ENTRN------VPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPS-----DLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPLKT-----------RINKVRKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCST---YLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 S++ P + +P KH S V VS+CNCGR QG R DPF ++ANY FYE M ++C C + + P E T N + P + G + ++ ++ + + E+ QS + LSP+ ++S++ L S + S SS + + E ++ + P+ + + SI S C PG+ TL+ + +P +PSW+L GP Y+H++GL+ SGF+ G+NFLLPWDV L+ + + +KQ+ R +K F+GFE EC GHRF + PD +++G + ++ + ++ ++PLY+PC C + YLAQLMRI+V P + + + + PKV G T FT GS P L W+LRLP+ Y+ Sbjct: 473 SLRSQPCTQPKEMPHDKHNSGVIHVSSCNCGRTQGRREDPFSLRQANYEFYEHMVKMCNLCVKVKQFKFPIFEPTNNEYRAAAFEVAFPLLHAGKNRLAQDAELDPDEEDEELPTGEREEQHITQSNGCSQPLSPTFGSDLNMSIAGFGVSLNESEPCFDQSSSSEAESTCSGTSSEESNNELVLQLKEPAKKHEESCDPDSIAPLPSMCLTST------------TEYLPGLVHTLSKVGL-LPLFPSWSLACVGPSSIYSHNTGLQEHFQSGFLSGANFLLPWDVQLRLVHASKHYHNSHQPHMSKKQQRYRKHGDRMVLKIFVGFEYECSRGHRFMMCRPDRVLRG--GADIERDTCSKMVHTNMPLYYPCPCRSQNNYLAQLMRIHVVTPKAP-VNIIVDPKVCMGKDKYT--FTLGSMVPPRLSQSAYWILRLPYVYQ 897
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Match: sp|B4MV81|SMG8_DROWI (Protein SMG8 OS=Drosophila willistoni OX=7260 GN=GK15451 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.204e-41 Identity = 129/452 (28.54%), Postives = 210/452 (46.46%), Query Frame = 3 Query: 1539 SVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC--CFRFNRVALP------ENTRNVPINVPEIATGGG-----GGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTN-QMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTEC-------GGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE---YSGFVHGSNFLLPWDVPLKT-----------RINKVRKQRVKRAFAAGN---FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC---STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYE 2771 S++ P + P KH S + VS+CNCGR QG R DPF ++ANY FYE M ++C C + + P + R GG GG + ++ + L ++ + + SDL++S + L + E +S A+E +E + +ES+S ++ N P + + E GG PG+ T + NP +P +PSW+L GP Y+H++GL+ SGF+ G+NFLLPWDV ++ ++ K QR +++ +G +K F+GFE EC GHRF + P+ +++G + ++ + ++ +++PLY+PC C S YLAQLMRI+V P + + + + P+V G FT G+ +P L W+LRLP+ Y+ Sbjct: 475 SLRRHPCTQAKEAPHEKHASGIIHVSSCNCGRTQGRREDPFTLRQANYEFYEYMAQICNLCVKVKQYQFPIFEPSVSDYRAAAFEAAFPLLHGGKPNAEGGEQAAGACEEDEQL-----------TNGCSQPLSATFGSDLNMSIGDFDSLLEGSQVEEPEISYGS----ADEDDEESLSNTNESLSENTE----NELVLQFKGPQKAANNDDELDETETIVQSSGGYSNSTTEYLPGLVHTFS-NPSLLPMFPSWSLACVGPSSIYSHNTGLQEHFQSGFLSGANFLLPWDVHVRLVQAQKNQHHLQQMGKKHLQRYRKSHLSGGDRLTLKIFVGFEYECSRGHRFMMCSPERVLRG--GADIERDTSHKVVHQNMPLYYPCPCRSQSNYLAQLMRIHVVTPKAP-VNIILDPRVCVG----QYTFTLGTVSPPRLSQSAYWMLRLPYVYQ 899
BLAST of Protein smg8-like protein vs. TrEMBL
Match: A0A3S3R2Y3 (Protein smg8-like protein (Fragment) OS=Dinothrombium tinctorium OX=1965070 GN=B4U79_02378 PE=4 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 1.664e-74 Identity = 234/829 (28.23%), Postives = 363/829 (43.79%), Query Frame = 3 Query: 492 LHFDPFYIELFSQVNILRKKYKSLTENELKTISN-SLEVVNNGRLVQPRLLFVFNVPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDY-DSICQPDRDIQSAAFGQFLTKQIHSFSVTKESSGFGSENI-------SCRNWFKACHKLYNLF---CSEKFRFTDSLFNHRFG-------FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC-CFRFNRVAL----PENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSV------SSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE-YSGFVHGSNFLLPWDVPLKTRIN----------KVRKQRVKRAFAAGN--FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCS----TYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLR 2837 L FD Y+++F + R K + + L+ + S + ++ GRL PR+LFVF I+ + L D+I L NIC + SL + FVFI T D S F+D Y +S + F F+ I G + + +++F KL F E + ++FN F + C L +A + Y+D LPT Y+ D H K A Q+ A+GP L R+L E ++ W G Q+CE +S+T C + +H+ + S D A ++ ++SI ++ N LP M HCS V+L SAC+CGRRQ R DPF K ANY FY M C C RV P T P N + M E++Y++ QP + ++S S G+E+++ S +L ++ ++L + + E V SS D+ +E + + D + + GGD + + S R + PGM +++ + + +P++ SW+L+ GP Y+H+ G++ GF+ G+NFLLPWDV +K + + + K+ G VK F+G E ECP GHRF + PD +++ ++ VKE N + + D+PLYFPC CS +AQLMRI++ P + + + + PKV+PGPP PIF+PG P+ L W+LRLPF YE + +Y D ++ C+LLR Sbjct: 96 LQFDLNYLQIFRHLEATRLKLQPYITDILRNVHGLSNDWISFGRLCSPRVLFVFENYEKNNETIVKNKRNYEKYLEDQIYRFLRKSRIITNICSN--SLFAICNQTDFVFIATKDA----TIRDAQSFFLDLLVKYCNSEPFEEEKEDERNFYSFIWAHISVALSRGFDDNVGRHAVVPVFELPTVKDFFNVLQKLKEFFYKPVEEMSKEMATVFNQWRSSLDADTRFSEARCAKGLPIAMSVYQDSLPTHYTSDFHERKVAMALQMFTLHARGPALFDYARQLREECDRFWQNGHQMCEVLSLTGNNCINPIHI------------TKSEDAATGEVV-----------------------EDSIANT---------NQLPSMPHCSGVKLTSACDCGRRQANREDPFTVKAANYDFYMLMRSKCSCGHLERVEFPIFQPSTTDVKPANTLTVENS-----LMTQSEQEYES-QPDIRNSFTNLSQSSVGGVEAVAESVDTLKRS-EILSKEKEVQEQPVEVSKAASSKDEETKSECSSDEEGDEDESDDDTENGGGDRERDIQLVIRESISSRLNTYVNQSS-----TTHYLPGMLHSMSPSGL-LPKFSSWSLVCLGPSSLYSHNMGVQDQPGFISGTNFLLPWDVTVKLEHSGHLPPLWEGKRPPGIKNKKTLKDGTQFTVKIFIGTEYECPRGHRFMCSAPDTILKANLGI--VKENANKIASNDMPLYFPCVCSRTGKQLIAQLMRIHIVTPKAP-VHVTLDPKVQPGPP-PCPIFSPGLPEPVRLSQSAYWILRLPFVYEGDHGVYYPPKDR--LDSCRLLR 855
BLAST of Protein smg8-like protein vs. TrEMBL
Match: R7VIE9 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_223495 PE=4 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 6.702e-74 Identity = 235/842 (27.91%), Postives = 372/842 (44.18%), Query Frame = 3 Query: 489 GLHFDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNVPI------SPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICG--SEYSLAKVQTNCPFVFIRLPHGNNLRTFN---DLLSHFIDNNFDYDSI--------CQPDRDIQSA--AFGQFLTKQIHSFSVTKESSGFGS-----------ENISCRNWFKACHKLYNLFCSE--------KFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIATGGG--GGPEMI-SIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMS-MPRYPSWNL-MDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLK---------TRINKVRKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCS----TYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQ 2840 G FD Y++LF ++ILR K S L+++ + VN GRL PR+LF+F + + VS Q TS V L+ +E+++Y +L+ I S SL V N FVFI N+L+ N + L+ +N D DS P + S F +FL++ I +++K GF E+ S + W +A ++ F E F +L + F + C L +AE Y++GLP Y++ H A+++ + A+GP +++L ++ K W G ++CE S+T C +E+H LP D D+ +LP M+HCS+V+ +ACNCGRRQ R DPFDYK AN+ +YE+ CC ++ LP T P+ GG GP+ + S + K + + S + S L+LS N +S S D E ++ S +P + D + CRQ G + +DNP+ +P++ SW++ M S SY S+GL+ GF+H +++LLPWD+P + + + RK +V A N V+ ++G E ECP GHRFF++GP+ + + AS KE + +L D+PLYFPC CS +++ QLMR++V V ++ L++ + +V+P PP +P F P + P+ L PG LWV+R P+ Y + Y +D + + CKL ++ Sbjct: 160 GSSFDVGYVKLFHILDILRSKLLSHLGEVLRSLHLPKDWVNAGRLCAPRVLFLFQSTLLVDDKPAVVSKGRGQKTSPVKRLQHAVEDQIYRILRKARIITNISNNSLFAVPANQEFVFIN--RENSLQPINFFAEKLTRKCASNLDDDSSYFEHQVPSGTPGLLMHSPNHPFREFLSQHI-ELALSK---GFDDNMGRNPVPPVFESPSLKVWLEAAQAVHAFFFEEPKDIKAKAHFGQLHNLLHTNARFSEGRCIKVLPLAEKAYQEGLPHHYTQADHLAMLVQAKRVFMQHARGPACHQYLKQLEQDCTKFWENGHRMCEHQSLTGNPCTNELHRLPS--------------------------------------------DEETDDNA---------HLPEMEHCSQVKTRAACNCGRRQAEREDPFDYKTANFDWYEKQESSCCHTLDKHPLPTFTP----TSPDSRAGGKIHRGPQSLGSPDSKLEAV--------------------STALSHLTLSNGN-----------SSPSLYQDEFNPEASQDQAMHCSASSPHSPIELDD-----------SELCRQHSTVEYLAG-------------MVHSDNPLGLLPKFSSWSIRMLSK---SYNPSAGLDQPGFLHFTSYLLPWDIPTQGSDIWPIASKKYKQNRKAKVGSDSNAANSVRFYVGLEYECPRGHRFFMSGPEKIFKAP-ASGVFKETAHKILHHDMPLYFPCHCSRSGKSFMTQLMRLFVYVADTP-LQIALNVRVQPAPP-PSPNFHPHVEGPLALPPG-LWVVRFPYVYYGDSVHYPMPSDAQQLSSCKLHKE 876
BLAST of Protein smg8-like protein vs. TrEMBL
Match: A0A443S3W4 (Protein smg8-like protein (Fragment) OS=Leptotrombidium deliense OX=299467 GN=B4U80_06922 PE=4 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 6.054e-73 Identity = 239/835 (28.62%), Postives = 356/835 (42.63%), Query Frame = 3 Query: 492 LHFDPFYIELFSQVNILRKKYKSLTENELKTISN-SLEVVNNGRLVQPRLLFVFNVPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSICQPDRDIQ----SAAFGQFLTKQIHSFSVTKESSGFGSENI-------SCRNWFKACHKLYNLF---CSEKFRFTDSLFNHRFG-------FFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELC-CFRFNRVALP----ENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHG-MESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSD-------SQDESVSAPSDGGDGNGATASIPAPAS-SCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLE-YSGFVHGSNFLLPWDVPLKTRIN----------KVRKQRVKRAFAAGN--FVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCS----TYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLR 2837 L FD Y+++F + R K + L++I S + V GRL PR+LFVF IL + L D+I L NIC + SL + FVFI N T D + F+D Y C + ++ S +F FL I G N+ + +++F KL F E + ++FN F + C L +A + Y++GLP+ Y+ + H K A Q+ A+GP L R+L E ++ W G Q+CE +S+T C + +H T D IGD + + N LP M HCS +L SAC+CGRRQG R DPF K ANY FY M C C R+ P + P + +I E + D + + I G ++ L SD+ LS+ +M+ +S L+T+ ++EE KS+ +ES +GGD N + S S R ++ PGM +++ + + +P++PSW+L+ GP Y+H+ G++ GF+ G+NFLLPWDV +K + + + K+ G VK F+G E ECP GHRF +GPD +++ ++ +KE N + + D+PLY PC CS +AQLMRI++ P + + + + PKV+PGP PIF PG P+ L WVLRLPF YE IY D +E C+LL+ Sbjct: 18 LQFDLNYLQIFRHLEATRLKLQPYITEILRSIPGLSSDWVTFGRLCSPRVLFVFE-NYENNDLILKNKVNYEKYLEDQIYRFLRKSRIITNICSN--SLFAICNQTDFVFI----ATNDVTIRDPQTFFLDLLVKY---CNSENIVEEREESRSFYSFLWAHISVALSKGFDDNVGRHNVVPIFELPTVKDFFSVLLKLKEFFYKPAEELKKEVSTVFNQWRSSLDSDTRFSEARCAKGLPIAMSLYQEGLPSHYTAEFHERKVAMAIQMFTVHARGPALFDYARQLREECDRFWQNGHQMCEVLSLTGNNCINPIHC-------------------------------------------TKSEDAVIGDITE--DKTNSNQLPSMPHCSNYKLTSACDCGRRQGNREDPFTVKAANYDFYSLMRNKCSCGHLERIEFPVFQPSTSEVKPADTLDIIEANLMSQNEPQFESQPDIHESLTNLSQSSIGVGEAVGSVDMLKKSDI-LSKEKEMMEQSFECLQTN-----------KEEETKSEYSSDEDVDDEESEEDTENGGDYNDKDIQLIIRESISSRMNAFISQTS-----TTHYLPGMLHSMSPSGL-LPKFPSWSLVCLGPSSLYSHNMGVQDQPGFISGTNFLLPWDVTVKLEHSGHLPPLWEGKRPPGIKNKKTLKDGTQFTVKIFIGTEYECPRGHRFMCSGPDTVLKANLGV--IKENANKVASSDMPLYLPCVCSRTGKQMIAQLMRIHIVTPKAPV-HVTLNPKVQPGP-SPCPIFHPGLPEPVRLSQSAYWVLRLPFVYEGEHGIYYPPKDR--LESCRLLK 773
BLAST of Protein smg8-like protein vs. TrEMBL
Match: V4A8L5 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_228810 PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.938e-72 Identity = 234/881 (26.56%), Postives = 368/881 (41.77%), Query Frame = 3 Query: 489 GLHFDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNVPISPVSAILNQSTSN---------VVTLRDRIEEKLYAVLKYHNICG--SEYSLAKVQTNCPFVFIRL-------PHGNNLRTFNDLLSHFIDNNFDYDSICQPDRD-------------IQSAAFGQFLTKQIHSFSVTKESSGFGSENIS------------CRNWFKACHKLYNLFCSE--------KFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALP--------ENTRNVP-------INVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHG-------MESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEE----HKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKV--------RKQRVKRAFA-AGNF-VKAFLGFEMECPVGHRFFLAGPDNMMQ-GSMASHQVKEAVNGLLTRDVPLYFPCQCST---YLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQSIFYEE 2858 G FD Y++LF ++++R K +S L S + + RL PR+LF+F +S N S + + L+ +E+++Y +L+ + S SL V N FV++ P + L +L + D++ S R I+ F +F+ + I S GF ++N+ C WF +L+ + + SL F + C L +AET Y+ LPT Y R H +K A+ + A+GP +++L E K W GRQ CE++S++ C + +H L D ++ +E+ LP H S+++ +ACNCG++Q + D FD+K ANY FYE + + CC + ++ LP R VP + VP+ +T GG + S+ L + HG +++ S S ++ + R + + E+ + KS + E+ P+ + N SI S +Q TE PGM V P +P++ SW+L G Y+HS GL+ GF+ GSNFLLPWD+ LK K +K R KR+ AG ++ FLG E ECP GHRFF +GPD +++ SM S VK+ N LL D+PLY PC C + Y+AQLMR+Y+ P+ +++ + P ++PG P+F PG+D PIEL +W LRLP Y+ + +Y +D + +C+LL+ Y E Sbjct: 145 GSTFDIGYVKLFRILDMIRLKLQSSISEVLSEFILSQDWYTSARLCSPRVLFIFQTATFELSFDDNDSLYSKTRPQKNLPIKKLQINLEDQIYRILRKSRVITNISNNSLFAVPANQEFVYVHTKREDCPDPVTSYLHLLRNLNTPSKDDSPKSRSYLTNRRGGQGPLASSSFNNRIRECNFKEFIWQHIE----LAFSKGF-NDNVGRNPLPSTFELPVCETWFYVALRLHQFYFTNIPEGKPQAHLNTLKSLLETDVRFSENRCNKYLPLAETAYQQDLPTHYVRSYHVQKLAQAKHVFAQFARGPAYGEYMKQLEEACEKWWKTGRQQCESVSLSGNLCINPIHRLE--------------------------------------------------DEMETEKKEQLPVLP---HSSQIKTKAACNCGKKQADKEDCFDHKSANYDFYEMLAKTCCHKLQKIELPAFKASTTEAKARQVPLPPTNQLLPVPKSSTSGGDSKRIESVVSGMSGLS-LALSLGQSGGSDVYHGHQDGLDQRDTIDVSSRVASLADEAMTRDDDDDNEDDNDDGKEDVGEDDTKLPSSSKSKEEIENEDTPTVVEEKN--IKSICEEIIS--RQHSTTE----------YLPGM-VHTDSPPGLLPKFSSWSLCCLGKPSFYSHSQGLDLPGFLAGSNFLLPWDITLKISKEKWPTVGETAGKKGRQKRSHKDAGEVSLRVFLGNEYECPRGHRFFCSGPDKIIKVSSMCS--VKDNANKLLNLDMPLYTPCHCRSTKGYIAQLMRLYIVTPDGP-IRILLNPTIQPG-IAPCPLFHPGTDKPIELPSNGVWCLRLPHVYQGDRGVYNMPSDPQQFHQCRLLKGVFSYRE 947
BLAST of Protein smg8-like protein vs. TrEMBL
Match: C3XZ69 (Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65813 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 7.498e-69 Identity = 243/894 (27.18%), Postives = 362/894 (40.49%), Query Frame = 3 Query: 483 VIGLH----FDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNVPISPVSAILNQST--------SNVVTLRDRIEEKLYAVLKYHNICG--SEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSICQPD--------RDIQSAAFGQ------------------FLTKQIHSF--------SVTKESSGFGSENISCRNWFKACHKLYNLFCSEKFRFTD---------SLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP--EIATGGGGG------PEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTN------QMLPRSRRTLETSVSSTDDRLIAE-EQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKV---------RKQRVKRAFAAG-----------NFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCST-----YLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQSIFYEEILDGE 2873 ++ LH FD Y +L V+ +R K + ++ L+ E + GR PRLLFVF P + T S L+ RIE+++Y + + + S+ L V N FV+I+ G + +LL++ N P R QSA FL + I SV + E S + W C+ LY L +E + S + F C L +A + Y++ LP+ Y+ VH + A ++ A+GP V +L E+ K WA GRQ+CE S+T Q C H H LP+ G A + ++ Q+ +PCM H S + + ACNCG +Q R DPFD K AN+ F+ M E CC ++ P R P P E A PE +SI K D D + + G SL+ LSL Q+ ML + + + D + A+ +Q+E +++ + V PS T S+P G + PG+ +P++ SW L+ GP Y S GLE GF+HGSNFLL WD+P+ T + Q V+R+ G +FV+ ++G+E EC GHRF +GPD +M+ S S VKE LL+ D+PLYFPC C + +L QLMR+++ P+ +++ + P+++PGPP P F P D I L P LWVLRLPF Y + D + + CK+L+ + + +GE Sbjct: 140 LVALHPTCTFDMSYGQLLRTVDSVRLKMLPILQDVLRDAPIGAEWKSAGRSCTPRLLFVFQKSYLPTESETRAETGKSKGTKHSPKKRLQHRIEDQIYRIFRKSRLLTNQSKDCLFTVPPNQTFVYIQSGDGP-VDAITNLLTNLHQNCAMGKEAETPASRSYQMSRRTNQSALMNPPSILLASKPNGADDSLLGFLWQHIDLVLSGKGFDDSVGRNPQPSHFELPSFKKWLSVCNTLYELLLTEAGQHAKVQGCLDTMGSSLDVETKFSDSRCSKVLPLASSAYQNSLPSHYTSKVHNNQLAQAMKVFKQHARGPAYEHYVLQLQEDCEKFWANGRQLCEERSLTGQHCVHPFHTLPKP------GQPADPEPSDSQV------------------------------------------VPCMPHNSRARSLCACNCGCKQAQRDDPFDVKAANHDFFHLMEEKCCSSLEHISFPVFQRQ-PQGTPGEEAAPTPEEDPPPTFQPE-VSI--KTDTEPSKRKDSVLSSATTTASGGLSLA---LSLGQSGGSDMFVSMLHADQNSDSLAAVGMDSMMAADSQQQEAEAEKTSQLVRQPS-------VTESLP------------------GMLHSDCPPGI----------LPKFSSWELVSLGPVSQYYPSMGLEQPGFIHGSNFLLAWDIPIHTERPQQGDQAWPAPGESQSVRRSIPHGGKPRRGAKDSDSFVRVYVGYEYECARGHRFLCSGPDKVMKAS-NSGSVKETAMKLLSMDMPLYFPCPCPSRGAKPHLGQLMRVFITTPDPP-VQIHLHPRLQPGPP-PCPTFYP-QDEDIPLPPSRLWVLRLPFVYVGEAGVISPPRDSQPLLSCKVLKGLLKATIVEEGE 938
BLAST of Protein smg8-like protein vs. Ensembl Cavefish
Match: smg8 (SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]) HSP 1 Score: 107.071 bits (266), Expect = 3.586e-23 Identity = 94/299 (31.44%), Postives = 135/299 (45.15%), Query Frame = 3 Query: 1962 RTLETSVSSTDDRLIAEEQEEHK-SDSQDESV------SAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKV------------------RKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 R+ E + S DRL +E H DS S+ S S G G+GA P S +Q E PGM + + +P++ SW+L+ GP +Y + +GLE GF+ GS FLLPWDV +++R + KR A G V + E G RF +GPD +++ + KE L D+PLY P + AQL R++V VP++ L ++ + P+++PGPP PIF P A + L P LWVLR P+AY Sbjct: 604 RSAEVAPSGEVDRLKEKETVTHTPGDSTGLSLALSLGQSTDSLGPYGDGAEGHEKRP--SVDRQASTVE----------YLPGMLHSGCPKGL-LPKFSSWSLVKLGPAKAYNNLTGLEQPGFLPGSAFLLPWDVVIRSRSEDDPSSLEALDGGPSSWPAPNKAPAGKRGSAGGLDVVG----DYEDSRGRRFLSSGPDKVVK-VLGQGGAKEPATRALNSDMPLYIPSPAQGRGIKPHYAQLARLFVVVPDAPL-EITLSPQIQPGPP-PCPIFHP-EQAEVVLPPDGLWVLRFPYAY 881 HSP 2 Score: 95.5153 bits (236), Expect = 1.338e-19 Identity = 114/492 (23.17%), Postives = 178/492 (36.18%), Query Frame = 3 Query: 519 LFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNVPISPVSAILNQSTSNVVT------------------LRDRIEEKLYAVLKYHNICGSEYS--LAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSIC------------------QPDRDIQSAAF-----GQFLTKQIHSF---SVTKESSGFGSENISCRN-------------WFKACHKLYNLFCSE--------------KFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVP 1775 LF ++ LR+K L +K S E N R PRLLFVF + + L S+S+ L+ +E+++Y + + + ++ S L V N FV++ +P G + + LL N ++ QP ++++ F GQ + + F V S G ++ RN W +KLY + + + + + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+G +L E+ K W+ G Q+CE S+T Q C H+ HLLP+ G D N I Y NS G S S+CNCGR+Q R DPFD + ANY FY+ + E CC + R+ P + P P Sbjct: 165 LFRALDPLRQKALPLLRGAIKDCPVSKEWKMNCRPCPPRLLFVFQM-----NGALRVSSSSGGNGNDGPGGDKPKKHSPRRRLQHALEDQIYRIFRKSRVLTNQSSNCLFTVPANQAFVYV-VP-GPDEDPISSLLGQLRSNCALRENDAGTPVPGPRRYQQMRHSNRQPSFNVENNGFFSSSGGQLVDCTLKEFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYTKWAHIAYKLYQVMIETSDDETAELSLKVQGQLKVLEGFLDADAKFSENRCQKALPLAHSTYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKS------GEKPEMD-HNPPILY----------------------HNSRGRS-----------------------TSSCNCGRKQAPREDPFDIQAANYDFYQIVEEKCCSKLERINFPVFQASTPDPAP 597
BLAST of Protein smg8-like protein vs. Ensembl Sea Lamprey
Match: smg8 (SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]) HSP 1 Score: 107.071 bits (266), Expect = 6.949e-24 Identity = 75/216 (34.72%), Postives = 112/216 (51.85%), Query Frame = 3 Query: 2223 MPRYPSWNLMDSGPYFSYTHSSGL-EYSGFVHGSNFLLPWDVPLKT--RINK---------VRKQRVKRA----------FA-------AGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCST-----YLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 +P + SW+L+ GP +Y S GL + GFV G++FL+PWDVPL + R N+ +R + +RA FA N +A++G+E E G RF + PD +M+ + S ++ + L D+PLY + LAQLMR+YV VP+++ ++L + P+V+PG PIF P + L LWVLRLP AY Sbjct: 630 LPSFSSWSLVRLGPAKAYVPSQGLTDMPGFVPGTHFLMPWDVPLSSTRRSNEGEEEEAWPAIRTEGAERAERAEGESWRGFAPTRTWRRGDNTARAYVGYEYEDSRGRRFMCSAPDKVMKVAPGS-GYRDFASRALAADMPLYVAASGQSRGPKPALAQLMRLYVVVPDAS-VRLLLAPQVQPG-SAPCPIFVP-EQREVTLPTDGLWVLRLPMAY 841 HSP 2 Score: 102.834 bits (255), Expect = 1.695e-22 Identity = 68/238 (28.57%), Postives = 95/238 (39.92%), Query Frame = 3 Query: 1056 NLFCSEKFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPIN 1769 L C E F D+ F+ + C+ AL +A + Y+ GLP Y+ H + A I A+GP + KL E+ + W G Q+CE S+T Q C H+ HLLP N Q D ++P P + HCS + S CNCG QGTR DPF + AN+ FYE M + C + A P R+ ++ Sbjct: 336 QLKCLEGFLDADTRFS------ESRCQKALPLAHSAYQAGLPHHYTSAYHRSQLAHALSIYRQHARGPAYQAYLLKLQEDCHAFWQAGHQLCEERSLTDQHCIHKYHLLP--------------KAGNGQ------------------------------DPDQVP--------PVVPHCSRSRATSTCNCGSHQGTREDPFTLRAANFTFYETMEDKYCGKLEHFAFPTFGRDTGVS 515
BLAST of Protein smg8-like protein vs. Ensembl Nematostella
Match: EDO39578 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9H9]) HSP 1 Score: 103.605 bits (257), Expect = 9.903e-26 Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 2415 VKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCST---YLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLR 2837 V+A++G E ECP GHRF +GPD M++ + + H VKE + L+ D+PLYFPC C + AQL+R+YV P++ + L + P V+P P P+F PG + + L P L VLR P+ Y + D + + C++L+ Sbjct: 1 VRAYIGDEYECPRGHRFICSGPDKMVKATSSGH-VKETAHKLVNMDMPLYFPCPCRSSKPLHAQLIRVYVCTPDTP-ITLSLSPWVQPAAP-PCPVFYPGVEGGVSLPPASLCVLRFPYVYVGSDGPILPPGDSQPLLSCRVLK 141
BLAST of Protein smg8-like protein vs. Ensembl Medaka
Match: smg8 (SMG8 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:101162064]) HSP 1 Score: 157.147 bits (396), Expect = 8.447e-39 Identity = 129/439 (29.38%), Postives = 187/439 (42.60%), Query Frame = 3 Query: 1554 PEEKRN---NLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPASSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINK-----------------VRKQRV-KRAFAAG--------NFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQC-----STYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAY 2768 P+EK + N P + H S + S+CNCGR+Q R DPFD + ANY FY+ + E CC + R+ P + P P + S E D +P + +S +P D SLS L S+ + D L P GDG P+ RQ P PGM + + +P++ SW+L+ GP SY +GLE GF+ GS+FLLPWD+ +++R ++ K + KR G + + F+GFE E G RF GPD +++ M K+ +L D+PLY P + AQL R++V VP++ L++ + P+V+PGPP P+F P I L P LWVLR PF+Y Sbjct: 509 PDEKPDVDHNPPILNHNSRGRSTSSCNCGRKQAPREDPFDVQAANYDFYQMLEEKCCGKLERIDFPVFQPSTPDPAP-----ASNQAQQASCEGSGDADRP-----------KEPSSAQSHTPGDASLS------------LALSLGRSTDSL------------------EPYGDGDGPEKQGQPKRPSLIDRQ-----------PSTVEYLPGMMHSGCPKGL-LPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLLPWDLVIRSRSDEDAGLSEPLDGGASSWPAPNKSLIGKRGSTGGLGRSRRRDDMARVFVGFEYEDSRGRRFISCGPDKIVK-VMGPGGAKDPATRVLNTDMPLYIPSPSQGRGLKPHFAQLTRLFVVVPDAP-LEVTLNPQVQPGPP-PCPVFHP-EQTDIVLPPDGLWVLRFPFSY 885 HSP 2 Score: 70.4774 bits (171), Expect = 7.604e-12 Identity = 80/353 (22.66%), Postives = 133/353 (37.68%), Query Frame = 3 Query: 519 LFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVF---------NVPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYS--LAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYD-----SICQPDR------------------------DIQSAAFGQFLTKQIHSFSVTK----------ESSGFGSENISCRNWFKACHKLYNLFCS--------------EKFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLP 1385 LF ++ LR+K L +K S E N R PRLLFVF N P S + + S L+ +E+++Y + + + ++ S L V N FV++ +P + + LL+ N D +I P + + + +FL + + K + S F N + W KL+++ S + + D + F + C+ AL +A + Y+ LP Y+ VH + A ++ A+G +L E+ K W+ G Q+CE S+T Q C H+ HLLP Sbjct: 159 LFRAMDALRQKVLPLIRAAIKDCPVSKEWKLNCRPCPPRLLFVFQMNGTLKISNSPESGGNPDKPKKHSPRRRLQHALEDQIYRIFRKSRVLTNQSSNCLFTVPANQAFVYV-IPTADE-DPVSTLLTQLRSNCILTDQEPSVTISGPRKYQQMRRSARQLGGGGDAGGLSVVSQLVDCSLKEFLWQHVELVQTKKGFDDSVGRNPQPSHFELPNYT--KWASVASKLHHVLISNTDEEMAELAAKVQSQLKVLDGFLDADSKFSENRCQKALPLAHSAYQSNLPHNYTTTVHKNQLTQALRVYSQHARGVAFQRYALQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLP 507
BLAST of Protein smg8-like protein vs. Planmine SMEST
Match: SMESG000019988.1 (SMESG000019988.1) HSP 1 Score: 1741.09 bits (4508), Expect = 0.000e+0 Identity = 917/944 (97.14%), Postives = 922/944 (97.67%), Query Frame = 3 Query: 51 MYSYYNNGRFSFPPNFDFNIIPGKDSPTTIISVIGESDLFTVINKTEMFEDLTSSSMTPMNIIPPFRNEFTTEHSSSYLTGFYCEKHKIVFIHLRXXXXXXXXXXMHKTFANEKLKENAFDIEDXXXXXXXXXXXXXXXXXXXNVIGLHFDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNVPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSICQPDRDIQSAAFGQFLTKQIHSFSVTKESSGFGSENISCRNWFKACHKLYNLFCSEKFRFTDSLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTRQRCKHEVHLLPXXXXXXHFGASASWDGANQQITYXXXXXXXXXXXXXXDKYGTFMRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIATGGGGGPEMISIEKKYDNLQPYXXXXXXXXXXXXXHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGATASIPAPA--SSCRQQQQPTECGGGGPVQKSIFPGMSVTLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKVRKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCSTYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQSIFYEEILDGED 2876 MYSYYNNGRFSFPPNFDFNIIPGKDSPTTIISVIGESDLFTVINKTEMFEDLTSSSMTPMNIIPPFRNEFTTEHSSSYLTGFYCEKHKIVFIHLRSLNDSDLLLNMHKT ANE LKENAFDIEDSIYLKFLLYLFLLSDFILINVIGLHFDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFN+PISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSICQ DRDIQSAAF QFLTKQIHSFSVTKESSGFGSENISCRNWFKACHKLYNLFCSEKFRFTD LFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVT QRCKHEVHLLPEEEEEEHFGASASWDGANQQITY NN R G EEEDKYG+ +RDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIAT GGGPEMISIEKK+DNLQPYDIDEEDDISDQSEHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNG TASI APA SS RQQQQPTECGGGGPVQKSIFPGMS+ LADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKVRKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCSTYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQSIFYEEILDGED Sbjct: 1 MYSYYNNGRFSFPPNFDFNIIPGKDSPTTIISVIGESDLFTVINKTEMFEDLTSSSMTPMNIIPPFRNEFTTEHSSSYLTGFYCEKHKIVFIHLRSLNDSDLLLNMHKTLANE-LKENAFDIEDSIYLKFLLYLFLLSDFILINVIGLHFDPFYIELFSQVNILRKKYKSLTENELKTISNSLEVVNNGRLVQPRLLFVFNIPISPVSAILNQSTSNVVTLRDRIEEKLYAVLKYHNICGSEYSLAKVQTNCPFVFIRLPHGNNLRTFNDLLSHFIDNNFDYDSICQQDRDIQSAAFEQFLTKQIHSFSVTKESSGFGSENISCRNWFKACHKLYNLFCSEKFRFTDLLFNHRFGFFKKGCELALSVAETHYKDGLPTQYSRDVHYEKTKAARQILLSIAKGPNLLPSVRKLSENLNKVWAVGRQICEAISVTLQRCKHEVHLLPEEEEEEHFGASASWDGANQQITY-GNNNTGRRGGEEEDKYGSLVRDNSIGDSVKIPPEEKRNNLPCMKHCSEVQLVSACNCGRRQGTRRDPFDYKEANYVFYEQMTELCCFRFNRVALPENTRNVPINVPEIAT--GGGPEMISIEKKFDNLQPYDIDEEDDISDQSEHGMESLSPSDLSLSQTNQMLPRSRRTLETSVSSTDDRLIAEEQEEHKSDSQDESVSAPSDGGDGNGTTASILAPAGSSSRRQQQQPTECGGGGPVQKSIFPGMSIRLADNPMSMPRYPSWNLMDSGPYFSYTHSSGLEYSGFVHGSNFLLPWDVPLKTRINKVRKQRVKRAFAAGNFVKAFLGFEMECPVGHRFFLAGPDNMMQGSMASHQVKEAVNGLLTRDVPLYFPCQCSTYLAQLMRIYVAVPNSNLLKLFIQPKVRPGPPGETPIFTPGSDAPIELEPGHLWVLRLPFAYEHNGQIYRQQADMRVVEECKLLRQSIFYEEILDGED 940 The following BLAST results are available for this feature:
BLAST of Protein smg8-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of Protein smg8-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of Protein smg8-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Protein smg8-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protein smg8-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protein smg8-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protein smg8-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Protein smg8-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Protein smg8-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023531 ID=SMED30023531|Name=Protein smg8-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2968bpback to top protein sequence of SMED30023531-orf-1 >SMED30023531-orf-1 ID=SMED30023531-orf-1|Name=SMED30023531-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=943bp MYSYYNNGRFSFPPNFDFNIIPGKDSPTTIISVIGESDLFTVINKTEMFEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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