Partitioning defective 6
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023334 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13
Homology
BLAST of Partitioning defective 6 vs. Ensembl Human
Match: PARD6B (par-6 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:16245]) HSP 1 Score: 234.958 bits (598), Expect = 5.640e-73 Identity = 134/240 (55.83%), Postives = 174/240 (72.50%), Query Frame = 2 Query: 197 CNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 C +E+KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LRI IQ+K ++ G + K K ++ +L N ++ H IS+ DFR VSSIIDVDI+P T RRV+L + + +PLGFYIRDG SVR TP+G+EKVPGIFISRL+ GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ Sbjct: 13 CLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251 HSP 2 Score: 64.3142 bits (155), Expect = 1.261e-10 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T ++KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 16 TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHK 80
BLAST of Partitioning defective 6 vs. Ensembl Human
Match: PARD6A (par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]) HSP 1 Score: 219.55 bits (558), Expect = 3.171e-67 Identity = 124/237 (52.32%), Postives = 166/237 (70.04%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q++ ++ + + +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251 HSP 2 Score: 58.151 bits (139), Expect = 1.177e-8 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +R Sbjct: 17 EVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHR 79
BLAST of Partitioning defective 6 vs. Ensembl Human
Match: PARD6A (par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]) HSP 1 Score: 219.164 bits (557), Expect = 3.541e-67 Identity = 128/238 (53.78%), Postives = 167/238 (70.17%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQ-RKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q R+ S G + + K +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKK--GLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 250 HSP 2 Score: 58.151 bits (139), Expect = 1.172e-8 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +R Sbjct: 17 EVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHR 79
BLAST of Partitioning defective 6 vs. Ensembl Human
Match: PARD6G (par-6 family cell polarity regulator gamma [Source:HGNC Symbol;Acc:HGNC:16076]) HSP 1 Score: 220.32 bits (560), Expect = 3.600e-67 Identity = 134/246 (54.47%), Postives = 170/246 (69.11%), Query Frame = 2 Query: 179 LAFYLTCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 L FY C+ +E+KSKF AEFRR ++ G +E+F L+ + H + N D I Y D + LLPINNDDN+ +A+S LR+ IQ++ ++ G G + + + L +R H +I + DFR VSSIIDVD+VP T RRV+L R+ +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKP NQ Sbjct: 11 LRFY-DCSA-VEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVH-GDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERGSLGAGSLCRRRR-ALGALRDEGPRRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGASVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252 HSP 2 Score: 55.0694 bits (131), Expect = 1.361e-7 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ G +E+F L+ + H + N D I Y D + LLPINNDDN+ + Sbjct: 20 EVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVH-GDLLPINNDDNFCK 82
BLAST of Partitioning defective 6 vs. Ensembl Human
Match: PARD6A (par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]) HSP 1 Score: 191.815 bits (486), Expect = 4.945e-57 Identity = 119/239 (49.79%), Postives = 155/239 (64.85%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYID---ENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D E +SS L ++ R L +RP+ + +++ P LL IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAHAEADSSGLAFASNSLQRRKKGLLLRPVAPL------------------RTRPP----LL-----------ISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 221
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Match: par-6 (Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]) HSP 1 Score: 218.009 bits (554), Expect = 1.293e-67 Identity = 129/252 (51.19%), Postives = 173/252 (68.65%), Query Frame = 2 Query: 182 AFYLTCNMEIEIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 +++ + +++KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN ++ LR++IQR+G+S+ E +GYG + L+A + +++ IS +DFR+VS+IIDVDIVP RRV+L ++ RPLGFYIRDG SVR T G+ KV GIFISRL+ GLAESTGLL VNDEV+EVNGIEV GKTLDQVTDMMVAN+ NLIITVKP NQ L+ Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRKSFESARPLLRLLIQRRGESWEEKYGYGTDSDKRWKGISSLMAQKPPKRSYS-ISNPEDFRQVSAIIDVDIVPEAHRRVRLCKHGQERPLGFYIRDGTSVRVTERGVVKVSGIFISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKPANQRNTLS 255 HSP 2 Score: 59.6918 bits (143), Expect = 1.086e-9 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 2 AFYFDFHITSQIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 223 +++ + H T Q+KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN + Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRK 80
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Match: par-6 (Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]) HSP 1 Score: 218.009 bits (554), Expect = 1.293e-67 Identity = 129/252 (51.19%), Postives = 173/252 (68.65%), Query Frame = 2 Query: 182 AFYLTCNMEIEIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 +++ + +++KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN ++ LR++IQR+G+S+ E +GYG + L+A + +++ IS +DFR+VS+IIDVDIVP RRV+L ++ RPLGFYIRDG SVR T G+ KV GIFISRL+ GLAESTGLL VNDEV+EVNGIEV GKTLDQVTDMMVAN+ NLIITVKP NQ L+ Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRKSFESARPLLRLLIQRRGESWEEKYGYGTDSDKRWKGISSLMAQKPPKRSYS-ISNPEDFRQVSAIIDVDIVPEAHRRVRLCKHGQERPLGFYIRDGTSVRVTERGVVKVSGIFISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKPANQRNTLS 255 HSP 2 Score: 59.6918 bits (143), Expect = 1.086e-9 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 2 AFYFDFHITSQIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 223 +++ + H T Q+KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN + Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRK 80
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Match: par-6 (Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]) HSP 1 Score: 148.673 bits (374), Expect = 1.449e-42 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 2 Query: 557 NISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 +IS +DFR+VS+IIDVDIVP RRV+L ++ RPLGFYIRDG SVR T G+ KV GIFISRL+ GLAESTGLL VNDEV+EVNGIEV GKTLDQVTDMMVAN+ NLIITVKP NQ L+ Sbjct: 11 SISNPEDFRQVSAIIDVDIVPEAHRRVRLCKHGQERPLGFYIRDGTSVRVTERGVVKVSGIFISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKPANQRNTLS 135
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Match: mpz-1 (Multiple PDZ domain protein [Source:UniProtKB/TrEMBL;Acc:G1K0W2]) HSP 1 Score: 49.2914 bits (116), Expect = 6.598e-6 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 2 Query: 635 VKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMM 865 + L++ + R LG I G + PG+++S ++ GLAES G L D+++EVNG +VRG + V M+ Sbjct: 2161 IDLVKKTGRGLGISIV----------GRKNEPGVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAML 2227
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Match: mpz-1 (Multiple PDZ domain protein [Source:UniProtKB/TrEMBL;Acc:G1K0W2]) HSP 1 Score: 48.9062 bits (115), Expect = 7.170e-6 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 2 Query: 635 VKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMM 865 + L++ + R LG I G + PG+++S ++ GLAES G L D+++EVNG +VRG + V M+ Sbjct: 650 IDLVKKTGRGLGISIV----------GRKNEPGVYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCMQEDVAAML 716
BLAST of Partitioning defective 6 vs. Ensembl Fly
Match: par-6 (gene:FBgn0026192 transcript:FBtr0074456) HSP 1 Score: 246.899 bits (629), Expect = 4.271e-78 Identity = 145/242 (59.92%), Postives = 175/242 (72.31%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINL-ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 IE+KSKFDAEFRR S++ F L+E +H+L NI F+I YID ++ LLPINNDDN+ RAL LR+I+QRK E G+G + K + + IL+ + +ISI DFR+VS+IIDVDIVP T RRV+L+++ S +PLGFYIRDG SVR T +G+EK PGIFISRL+ GLAESTGLLAVNDEVIEVNGIEV GKTLDQVTDMMVANSSNLIITVKP NQ T + Sbjct: 20 IEVKSKFDAEFRRWSFKRNEAEQSFDKFASLIEQLHKLTNIQFLILYIDPRDNDLLPINNDDNFGRALKTARPLLRVIVQRK-DDLNEYSGFGTM-KPRNLIGSILMGHTPVKTKAPSISIPHDFRQVSAIIDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQRTLTS 259 HSP 2 Score: 67.0106 bits (162), Expect = 8.162e-12 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 2 QIKSKFDAEFRR--IRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + N A S++ F L+E +H+L NI F+I YID ++ LLPINNDDN+ R Sbjct: 21 EVKSKFDAEFRRWSFKRNEAEQ-SFDKFASLIEQLHKLTNIQFLILYIDPRDNDLLPINNDDNFGR 85
BLAST of Partitioning defective 6 vs. Ensembl Fly
Match: par-6 (gene:FBgn0026192 transcript:FBtr0074455) HSP 1 Score: 246.899 bits (629), Expect = 4.271e-78 Identity = 145/242 (59.92%), Postives = 175/242 (72.31%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINL-ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 IE+KSKFDAEFRR S++ F L+E +H+L NI F+I YID ++ LLPINNDDN+ RAL LR+I+QRK E G+G + K + + IL+ + +ISI DFR+VS+IIDVDIVP T RRV+L+++ S +PLGFYIRDG SVR T +G+EK PGIFISRL+ GLAESTGLLAVNDEVIEVNGIEV GKTLDQVTDMMVANSSNLIITVKP NQ T + Sbjct: 20 IEVKSKFDAEFRRWSFKRNEAEQSFDKFASLIEQLHKLTNIQFLILYIDPRDNDLLPINNDDNFGRALKTARPLLRVIVQRK-DDLNEYSGFGTM-KPRNLIGSILMGHTPVKTKAPSISIPHDFRQVSAIIDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQRTLTS 259 HSP 2 Score: 67.0106 bits (162), Expect = 8.162e-12 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 2 QIKSKFDAEFRR--IRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + N A S++ F L+E +H+L NI F+I YID ++ LLPINNDDN+ R Sbjct: 21 EVKSKFDAEFRRWSFKRNEAEQ-SFDKFASLIEQLHKLTNIQFLILYIDPRDNDLLPINNDDNFGR 85
BLAST of Partitioning defective 6 vs. Ensembl Fly
Match: sdt (gene:FBgn0261873 transcript:FBtr0100375) HSP 1 Score: 53.5286 bits (127), Expect = 3.185e-7 Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 632 RVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVN 910 R+ + S+ PLG +R+ + + I R++ G AE +GLL DE++EVNG E+RGKT+++V ++ A L + P Sbjct: 402 RIIQIEKSTEPLGATVRN------------EGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAG 482
BLAST of Partitioning defective 6 vs. Ensembl Fly
Match: sdt (gene:FBgn0261873 transcript:FBtr0111034) HSP 1 Score: 53.5286 bits (127), Expect = 3.316e-7 Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 632 RVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVN 910 R+ + S+ PLG +R+ + + I R++ G AE +GLL DE++EVNG E+RGKT+++V ++ A L + P Sbjct: 477 RIIQIEKSTEPLGATVRN------------EGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAG 557
BLAST of Partitioning defective 6 vs. Ensembl Fly
Match: sdt (gene:FBgn0261873 transcript:FBtr0089975) HSP 1 Score: 53.1434 bits (126), Expect = 3.527e-7 Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 632 RVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVN 910 R+ + S+ PLG +R+ + + I R++ G AE +GLL DE++EVNG E+RGKT+++V ++ A L + P Sbjct: 422 RIIQIEKSTEPLGATVRN------------EGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPAG 502
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Match: pard6b (par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]) HSP 1 Score: 230.72 bits (587), Expect = 2.480e-71 Identity = 130/239 (54.39%), Postives = 171/239 (71.55%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN---ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S+ LR+ +QRK ++ G + + K P + + + N IS+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITVKP NQ Sbjct: 16 VEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADVH-GDLLPINNDDNYHKAISMATPLLRLFLQRKEEADYSAFGTDTVTRKKTPAALAAVLLRPDTNKKKPPIIISLPKDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVRVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSHNLIITVKPANQ 253 HSP 2 Score: 62.7734 bits (151), Expect = 2.697e-10 Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 17 EVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADVH-GDLLPINNDDNYHK 79
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Match: pard6gb (par-6 family cell polarity regulator gamma b [Source:ZFIN;Acc:ZDB-GENE-010319-35]) HSP 1 Score: 224.942 bits (572), Expect = 1.770e-68 Identity = 135/242 (55.79%), Postives = 172/242 (71.07%), Query Frame = 2 Query: 194 TCNM-EIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 + NM +E+KSK+ AEFRR ++ G +E F L+ IH++ N++ +I Y D + LLPINND+N+++A+S LRI IQR+ + G + + K V + +N KR H I + DFR VSSIIDVDI+P + RRV+L R S +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKPVNQ Sbjct: 13 SLNMNAVEVKSKYGAEFRRFSVDRIKPGKFEEFYKLIMTIHRIANMEVMIGYADIH-GDLLPINNDENFSKAVSTAHPLLRIFIQRQEEVDYSNFGTSTLTRKKKAVVTLRNDLNRKRP-HIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRYGSDKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIANSHNLIVTVKPVNQ 252 HSP 2 Score: 54.6842 bits (130), Expect = 1.127e-7 Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSK+ AEFRR ++ G +E F L+ IH++ N++ +I Y D + LLPINND+N+++ Sbjct: 20 EVKSKYGAEFRRFSVDRIKPGKFEEFYKLIMTIHRIANMEVMIGYADIH-GDLLPINNDENFSK 82
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Match: pard6ga (par-6 family cell polarity regulator gamma a [Source:ZFIN;Acc:ZDB-GENE-050923-1]) HSP 1 Score: 207.608 bits (527), Expect = 9.028e-62 Identity = 122/251 (48.61%), Postives = 159/251 (63.35%), Query Frame = 2 Query: 173 IELAFYLTCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVS--KILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQN 916 I A L C +E+KSK+ AEFRR ++ G Y++F L+ +HQL + D I Y D + LLPINNDDN+ +A+S LRI IQ + ++ + K K +S K +++ N SI+D VD+VP + RRV+L R NS RPLGF+IRDG +V TP G+EK PG+FISR++ GLA TGLLA+ND+V+EVNGIEV GKTLDQVTDMM+ANS NLIITVKP NQ+ Sbjct: 55 IRKAHSLRCCSMLEVKSKYGAEFRRFSVDRYEPGRYKDFYRLIVRLHQLWHTDVFIGYADVH-GELLPINNDDNFCKAVSSTQSLLRIFIQLREEAEQCSACPDDMTKRKKSISHRKPAFQISKPHNFRPVSSIID----------VDLVPESHRRVRLYRQNSDRPLGFFIRDGTTVTVTPYGLEKRPGVFISRIVPGGLAACTGLLALNDQVLEVNGIEVSGKTLDQVTDMMIANSHNLIITVKPANQH 294 HSP 2 Score: 56.225 bits (134), Expect = 3.576e-8 Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSK+ AEFRR ++ G Y++F L+ +HQL + D I Y D + LLPINNDDN+ + Sbjct: 68 EVKSKYGAEFRRFSVDRYEPGRYKDFYRLIVRLHQLWHTDVFIGYADVH-GELLPINNDDNFCK 130
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Match: pard6a (par-6 family cell polarity regulator alpha [Source:ZFIN;Acc:ZDB-GENE-070705-215]) HSP 1 Score: 194.126 bits (492), Expect = 2.770e-57 Identity = 118/234 (50.43%), Postives = 162/234 (69.23%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPV 907 +E+KSKF+ E+RR + T G ++ F LL+ IH++ +D ++ Y D + LLPINND N+++ALS LRII+Q++ G + + K + + A + R I + DFR++SSIIDVDI+P T RV+L ++ + +PLGFYIRDGVSVR T +G+EK PGIFISRL+ GLA++TGLL VNDE++EVNGI+V GK+LDQVTDMMVANS NLI+TVKP Sbjct: 16 VEVKSKFEGEYRRFALKKNT-GGFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDYNFHKALSSANPLLRIIVQKRDVDDTVPFPTGSLQRRKKGLGGLRQAQPKSRPPL--IGLPQDFRQISSIIDVDILPETHLRVRLHKHGTHKPLGFYIRDGVSVRVTSHGVEKFPGIFISRLVKGGLADTTGLLGVNDEILEVNGIDVSGKSLDQVTDMMVANSHNLIVTVKPA 245 HSP 2 Score: 49.2914 bits (116), Expect = 6.329e-6 Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF+ E+RR + T G ++ F LL+ IH++ +D ++ Y D + LLPINND N+++ Sbjct: 17 EVKSKFEGEYRRFALKKNT-GGFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDYNFHK 78
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Match: pard6a (par-6 family cell polarity regulator alpha [Source:ZFIN;Acc:ZDB-GENE-070705-215]) HSP 1 Score: 194.126 bits (492), Expect = 3.046e-57 Identity = 118/234 (50.43%), Postives = 162/234 (69.23%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPV 907 +E+KSKF+ E+RR + T G ++ F LL+ IH++ +D ++ Y D + LLPINND N+++ALS LRII+Q++ G + + K + + A + R I + DFR++SSIIDVDI+P T RV+L ++ + +PLGFYIRDGVSVR T +G+EK PGIFISRL+ GLA++TGLL VNDE++EVNGI+V GK+LDQVTDMMVANS NLI+TVKP Sbjct: 16 VEVKSKFEGEYRRFALKKNT-GGFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDYNFHKALSSANPLLRIIVQKRDVDDTVPFPTGSLQRRKKGLGGLRQAQPKSRPPL--IGLPQDFRQISSIIDVDILPETHLRVRLHKHGTHKPLGFYIRDGVSVRVTSHGVEKFPGIFISRLVKGGLADTTGLLGVNDEILEVNGIDVSGKSLDQVTDMMVANSHNLIVTVKPA 245 HSP 2 Score: 49.2914 bits (116), Expect = 6.499e-6 Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF+ E+RR + T G ++ F LL+ IH++ +D ++ Y D + LLPINND N+++ Sbjct: 17 EVKSKFEGEYRRFALKKNT-GGFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDYNFHK 78
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Match: pard6b (par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:733488]) HSP 1 Score: 228.409 bits (581), Expect = 1.965e-70 Identity = 131/236 (55.51%), Postives = 170/236 (72.03%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNS-SRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR + G +E F LL+++H++ N++ ++ Y D + LLPINNDDNY +A++ LRI +QRK ++ G + K + +S +L K+ H IS+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP+G+EKVPGIFISRL+ GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ Sbjct: 18 VEVKSKFGAEFRRFALEKTKPGKFEEFYGLLQHVHKIPNVEVLVGYADIH-GDLLPINNDDNYLKAITTASPLLRIFLQRKEEADYSAFGTDTLTKKRTVLSTVLHPELNKKKPHIVISMPKDFRPVSSIIDVDILPETHRRVRLYKHGMDKPLGFYIRDGSSVRMTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSHNLIITVRPANQ 252 HSP 2 Score: 61.2326 bits (147), Expect = 1.278e-9 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = -1 Query: 8 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNY 199 T ++KSKF AEFRR + G +E F LL+++H++ N++ ++ Y D + LLPINNDDNY Sbjct: 17 TVEVKSKFGAEFRRFALEKTKPGKFEEFYGLLQHVHKIPNVEVLVGYADIH-GDLLPINNDDNY 79
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Match: pard6g (par-6 family cell polarity regulator gamma [Source:NCBI gene;Acc:550092]) HSP 1 Score: 214.542 bits (545), Expect = 5.456e-65 Identity = 130/244 (53.28%), Postives = 170/244 (69.67%), Query Frame = 2 Query: 197 CNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVN----EKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNS-SRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 + +E+KSK+ AEFRR +N G+++ F L+ +IH + ++D ++ Y D + LLPINN++N+ +A+S LR+ IQ++ + G + + K L+A+ R H NIS+ DFR VSSIIDVDI+P T RRV+L R+ +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLIITVKP NQ Sbjct: 15 ASSSVEVKSKYGAEFRRFSLNRYKPGTFDEFYNLILHIHHISSMDVMLGYADVH-GDLLPINNNENFFKAVSSANPLLRVFIQKQEEVDYSTFGSATLNRKK---RNALVALRNDSLRHRKPHINISMPHDFRPVSSIIDVDILPETHRRVRLYRHGCEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIITVKPANQ 254
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Match: mpp5 (membrane protein, palmitoylated 5 [Source:NCBI gene;Acc:100145156]) HSP 1 Score: 54.299 bits (129), Expect = 2.857e-7 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 623 TFRRVKLMRNSSRPLGFYIR-DGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQN 916 T + V++ + PLG +R DG SV ISR++ G AE +GLL DE++++NG+E+RGK +++V +++ NL + P Q+ Sbjct: 280 TVKIVRIEKARDIPLGATVRNDGDSV-------------IISRIVKGGAAEKSGLLHEGDEILQINGMEIRGKDVNEVFELLADMHGNLSFLLIPGQQS 365
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Match: mpp5 (membrane protein, palmitoylated 5 [Source:NCBI gene;Acc:100145156]) HSP 1 Score: 54.299 bits (129), Expect = 3.015e-7 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 623 TFRRVKLMRNSSRPLGFYIR-DGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQN 916 T + V++ + PLG +R DG SV ISR++ G AE +GLL DE++++NG+E+RGK +++V +++ NL + P Q+ Sbjct: 253 TVKIVRIEKARDIPLGATVRNDGDSV-------------IISRIVKGGAAEKSGLLHEGDEILQINGMEIRGKDVNEVFELLADMHGNLSFLLIPGQQS 338
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Match: mpp5 (membrane protein, palmitoylated 5 [Source:NCBI gene;Acc:100145156]) HSP 1 Score: 54.299 bits (129), Expect = 3.098e-7 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 623 TFRRVKLMRNSSRPLGFYIR-DGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQN 916 T + V++ + PLG +R DG SV ISR++ G AE +GLL DE++++NG+E+RGK +++V +++ NL + P Q+ Sbjct: 227 TVKIVRIEKARDIPLGATVRNDGDSV-------------IISRIVKGGAAEKSGLLHEGDEILQINGMEIRGKDVNEVFELLADMHGNLSFLLIPGQQS 312
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Match: Pard6b (par-6 family cell polarity regulator beta [Source:MGI Symbol;Acc:MGI:2135605]) HSP 1 Score: 234.958 bits (598), Expect = 4.278e-73 Identity = 134/240 (55.83%), Postives = 174/240 (72.50%), Query Frame = 2 Query: 197 CNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 C +E+KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LRI IQ+K ++ G + + K +S +L N ++ H IS+ DFR VSSIIDVDI+P T RRV+L + + +PLGFYIRDG SVR TP+G+EKVPGIFISRL+ GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ Sbjct: 13 CLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIRKKNMLSNVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251 HSP 2 Score: 64.3142 bits (155), Expect = 9.098e-11 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T ++KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 16 TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHK 80
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Match: Pard6g (par-6 family cell polarity regulator gamma [Source:MGI Symbol;Acc:MGI:2135606]) HSP 1 Score: 229.565 bits (584), Expect = 8.548e-71 Identity = 137/249 (55.02%), Postives = 176/249 (70.68%), Query Frame = 2 Query: 179 LAFYLTCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNE---KRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNS-SRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 L FY C+ +E+KSKF AEFRR ++ G +E+F L+ + H + N + I Y D + LLPINNDDN+ +A+S LR+ IQ++ ++ G G + + K K+L+ + + +R H NIS+ DFR VSSIIDVDI+P T RRV+L R+ +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKP NQ Sbjct: 11 LRFY-DCSA-VEVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINNDDNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKK----KVLVTLRDDGLRRRPHLNISMPHDFRPVSSIIDVDILPETHRRVRLYRHGYEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252 HSP 2 Score: 53.5286 bits (127), Expect = 2.436e-7 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ G +E+F L+ + H + N + I Y D + LLPINNDDN+ + Sbjct: 20 EVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINNDDNFCK 82
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Match: Pard6a (par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]) HSP 1 Score: 216.468 bits (550), Expect = 3.025e-66 Identity = 128/238 (53.78%), Postives = 167/238 (70.17%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQ-RKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + + ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q R+G S G + + K +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKREGDSSGLAFASNSLQRRKK--GLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 250 HSP 2 Score: 53.5286 bits (127), Expect = 2.545e-7 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + + ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +R Sbjct: 17 EVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHR 79
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Match: Pard6a (par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]) HSP 1 Score: 215.312 bits (547), Expect = 9.651e-66 Identity = 127/239 (53.14%), Postives = 167/239 (69.87%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRK--GKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + + ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q++ G S G + + K +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKRAEGDSSGLAFASNSLQRRKK--GLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251 HSP 2 Score: 53.5286 bits (127), Expect = 2.600e-7 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + + ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +R Sbjct: 17 EVKSKFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHR 79
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Match: Pard6a (par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]) HSP 1 Score: 206.838 bits (525), Expect = 8.435e-63 Identity = 124/233 (53.22%), Postives = 162/233 (69.53%), Query Frame = 2 Query: 224 KFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQ-RKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +FDAEFRR + + ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q R+G S G + + K +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 5 QFDAEFRRFALPRTSVRGFQEFSRLLCVVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKREGDSSGLAFASNSLQRRKK--GLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 234
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Match: sp|Q9BYG5|PAR6B_HUMAN (Partitioning defective 6 homolog beta OS=Homo sapiens OX=9606 GN=PARD6B PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.708e-72 Identity = 134/240 (55.83%), Postives = 174/240 (72.50%), Query Frame = 2 Query: 197 CNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 C +E+KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LRI IQ+K ++ G + K K ++ +L N ++ H IS+ DFR VSSIIDVDI+P T RRV+L + + +PLGFYIRDG SVR TP+G+EKVPGIFISRL+ GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ Sbjct: 13 CLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIKKKNVLTNVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251 HSP 2 Score: 64.3142 bits (155), Expect = 6.057e-10 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T ++KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 16 TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHK 80
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Match: sp|Q9JK83|PAR6B_MOUSE (Partitioning defective 6 homolog beta OS=Mus musculus OX=10090 GN=Pard6b PE=1 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 2.993e-72 Identity = 134/240 (55.83%), Postives = 174/240 (72.50%), Query Frame = 2 Query: 197 CNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 C +E+KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LRI IQ+K ++ G + + K +S +L N ++ H IS+ DFR VSSIIDVDI+P T RRV+L + + +PLGFYIRDG SVR TP+G+EKVPGIFISRL+ GLA+STGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITV+P NQ Sbjct: 13 CLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYSAFGTDTLIRKKNMLSNVLRPDNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPANQ 251 HSP 2 Score: 64.3142 bits (155), Expect = 6.364e-10 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T ++KSKF AEFRR + + G +E F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 16 TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIH-GDLLPINNDDNYHK 80
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Match: sp|Q9JK84|PAR6G_MOUSE (Partitioning defective 6 homolog gamma OS=Mus musculus OX=10090 GN=Pard6g PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.979e-70 Identity = 137/249 (55.02%), Postives = 176/249 (70.68%), Query Frame = 2 Query: 179 LAFYLTCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNE---KRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNS-SRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 L FY C+ +E+KSKF AEFRR ++ G +E+F L+ + H + N + I Y D + LLPINNDDN+ +A+S LR+ IQ++ ++ G G + + K K+L+ + + +R H NIS+ DFR VSSIIDVDI+P T RRV+L R+ +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKP NQ Sbjct: 11 LRFY-DCSA-VEVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINNDDNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKK----KVLVTLRDDGLRRRPHLNISMPHDFRPVSSIIDVDILPETHRRVRLYRHGYEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQ 252 HSP 2 Score: 53.5286 bits (127), Expect = 1.704e-6 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ G +E+F L+ + H + N + I Y D + LLPINNDDN+ + Sbjct: 20 EVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINNDDNFCK 82
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Match: sp|Q9NPB6|PAR6A_HUMAN (Partitioning defective 6 homolog alpha OS=Homo sapiens OX=9606 GN=PARD6A PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.523e-66 Identity = 124/237 (52.32%), Postives = 166/237 (70.04%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNN-ISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +RAL+ PLR+++Q++ ++ + + +L V R IS+ DFR+VSS+IDVD++P T RRV+L ++ S RPLGFYIRDG+SVR P G+E+VPGIFISRL+ GLAESTGLLAV+DE++EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ Sbjct: 16 VEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHNLIVTVKPANQ 251 HSP 2 Score: 58.151 bits (139), Expect = 5.653e-8 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKFDAEFRR + A+ ++ F LL +HQ+ +D ++ Y D + LLP+ NDD+ +R Sbjct: 17 EVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAH-GDLLPLTNDDSLHR 79
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Match: sp|Q9NAN2|PAR6_CAEEL (Partitioning defective protein 6 OS=Caenorhabditis elegans OX=6239 GN=par-6 PE=1 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 1.645e-66 Identity = 129/252 (51.19%), Postives = 173/252 (68.65%), Query Frame = 2 Query: 182 AFYLTCNMEIEIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLA 928 +++ + +++KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN ++ LR++IQR+G+S+ E +GYG + L+A + +++ IS +DFR+VS+IIDVDIVP RRV+L ++ RPLGFYIRDG SVR T G+ KV GIFISRL+ GLAESTGLL VNDEV+EVNGIEV GKTLDQVTDMMVAN+ NLIITVKP NQ L+ Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRKSFESARPLLRLLIQRRGESWEEKYGYGTDSDKRWKGISSLMAQKPPKRSYS-ISNPEDFRQVSAIIDVDIVPEAHRRVRLCKHGQERPLGFYIRDGTSVRVTERGVVKVSGIFISRLVDGGLAESTGLLGVNDEVLEVNGIEVLGKTLDQVTDMMVANAHNLIITVKPANQRNTLS 255 HSP 2 Score: 59.6918 bits (143), Expect = 1.382e-8 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 2 AFYFDFHITSQIKSKFDAEFRRIRINL--ATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 223 +++ + H T Q+KSKFD+E+RR I + A+ SY+ F+ L+E +H L ++ F + Y + LLPI NDDN + Sbjct: 6 SYHQNHHSTLQVKSKFDSEWRRFSIPMHSASGVSYDGFRSLVEKLHHLESVQFTLCY-NSTGGDLLPITNDDNLRK 80
BLAST of Partitioning defective 6 vs. TrEMBL
Match: A0A0X3PV64 (Partitioning defective 6 homolog beta OS=Schistocephalus solidus OX=70667 GN=PAR6B PE=4 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 1.953e-88 Identity = 150/243 (61.73%), Postives = 184/243 (75.72%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQ---IYKSKMPVSKILLAVNEK-RNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCL 925 +++KSKF+AEFRR I+ +T S+E+ LL+ +H L NI FVIQY+D E++LLPINND N RALS+ PLRI+IQ KG+SYGEL GY ++ K P + +EK + H +I++LDDF +VSSIID VP RRV L+R S PLGFYIRDG S+R TPNG+E+VPG+FISRLI GLAESTGLLAV DE+IEVNGIEV GK+LDQVTDMM+ANSSNLIITVKPVNQ TC+ Sbjct: 4 LDVKSKFNAEFRRFSIDPSTIKSFEDLYNLLQRVHFLYNIRFVIQYVDPKENTLLPINNDKNCERALSVATNPLRILIQLKGESYGELRGYNAPNTVFLRKKPAELVRSIGSEKPKPGHQSITLLDDFHKVSSIIDDGTVPECMRRVHLIRKGSVPLGFYIRDGFSIRTTPNGVEQVPGVFISRLIPGGLAESTGLLAVKDEIIEVNGIEVYGKSLDQVTDMMIANSSNLIITVKPVNQKTCI 246 HSP 2 Score: 71.2478 bits (173), Expect = 7.901e-10 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T +KSKF+AEFRR I+ +T S+E+ LL+ +H L NI FVIQY+D E++LLPINND N R Sbjct: 3 TLDVKSKFNAEFRRFSIDPSTIKSFEDLYNLLQRVHFLYNIRFVIQYVDPKENTLLPINNDKNCER 68
BLAST of Partitioning defective 6 vs. TrEMBL
Match: A0A183TG88 (Partitioning defective 6 homolog beta OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS15486 PE=4 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.033e-87 Identity = 149/243 (61.32%), Postives = 183/243 (75.31%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQ---IYKSKMPVSKILLAVNEK-RNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCL 925 +++KSKF+AEFRR I+ +T S+E+ LL+ +H L NI FVIQY+D E++LLPINND N RALS+ PLRI+IQ KG+SYGEL GY ++ K P + +EK + H +I++LDDF +VSSIID VP RRV L+R S PLGFYIRDG S+R TPNG+E+VPG+FISRLI GLAESTGLLAV DE+IEVNGIEV GK+LDQVTDMM+ANSSNLIITVKP NQ TC+ Sbjct: 4 LDVKSKFNAEFRRFSIDPSTIKSFEDLYNLLQRVHFLYNIRFVIQYVDPKENTLLPINNDKNCERALSVATNPLRILIQLKGESYGELRGYNAPNTVFLRKKPAELVRSIGSEKPKPGHQSITLLDDFHKVSSIIDDGTVPECMRRVHLIRKGSVPLGFYIRDGFSIRTTPNGVEQVPGVFISRLIPGGLAESTGLLAVKDEIIEVNGIEVYGKSLDQVTDMMIANSSNLIITVKPFNQKTCI 246 HSP 2 Score: 71.2478 bits (173), Expect = 7.757e-10 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 2 TSQIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 199 T +KSKF+AEFRR I+ +T S+E+ LL+ +H L NI FVIQY+D E++LLPINND N R Sbjct: 3 TLDVKSKFNAEFRRFSIDPSTIKSFEDLYNLLQRVHFLYNIRFVIQYVDPKENTLLPINNDKNCER 68
BLAST of Partitioning defective 6 vs. TrEMBL
Match: F1T103 (Partitioning defective 6 OS=Lymnaea stagnalis OX=6523 GN=par6 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 8.426e-86 Identity = 156/244 (63.93%), Postives = 190/244 (77.87%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYG-QIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLAPK 934 +EIKSKFDAEFRR I+ +++F +LLE +H L +I F+I Y D + LLPINN++N+NRAL+ L+I++QRKG+SYGEL+GYG Q K + P+SK++ R IS+++DFRRVS+IIDVDIVP T RRVKLM+N S +PLGFYIRDG SVR TP+G+EKVP IFISRL+ GLAESTGLLAVNDEV+EVNGIEV GK LDQVTDMMVANSSNLIITVKPVNQ LAP+ Sbjct: 16 VEIKSKFDAEFRRFSIDKTRMKQFDDFYVLLEELHHLTDIPFIITYTDLH-MDLLPINNNENFNRALTTARPSLKILLQRKGESYGELNGYGSQPLKKRNPISKLISTETPPRP-RIQISLMEDFRRVSAIIDVDIVPETHRRVKLMKNGSDKPLGFYIRDGTSVRVTPHGLEKVPAIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKKLDQVTDMMVANSSNLIITVKPVNQRMTLAPQ 257 HSP 2 Score: 62.7734 bits (151), Expect = 6.082e-7 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 +IKSKFDAEFRR I+ +++F +LLE +H L +I F+I Y D + LLPINN++N+NR Sbjct: 17 EIKSKFDAEFRRFSIDKTRMKQFDDFYVLLEELHHLTDIPFIITYTDLH-MDLLPINNNENFNR 79
BLAST of Partitioning defective 6 vs. TrEMBL
Match: A0A0R3UFQ2 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS5968 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 7.168e-85 Identity = 142/243 (58.44%), Postives = 180/243 (74.07%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGY---GQIYKSKMPVSKILLAVNEK-RNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCL 925 + +KSKF+AEFRR ++ +T +E+ ++E H L N+ F++QY+D E++LLPINND N RALS+ PLR++IQ KG+SYGE+ GY G ++ K P + +E+ + H +I + DDF +VSSIID VP RRV+L+R S+PLGFYIRDG S+RATP G++ VPGIFISRL+ GLAESTGLLAV DEVIEVNGIEV GKTLDQVTDMMVANSSNLIITVKP NQ TC+ Sbjct: 4 LAVKSKFNAEFRRFSLDRSTIKKFEDLYQVVEKAHGLYNVKFILQYVDPKENALLPINNDKNCERALSVAFDPLRLLIQLKGESYGEIKGYKPSGTVFLRKKPAELVRSIGSERPKPGHQSIILCDDFHKVSSIIDDGTVPECMRRVRLIRTGSKPLGFYIRDGFSIRATPTGVQHVPGIFISRLLPGGLAESTGLLAVKDEVIEVNGIEVFGKTLDQVTDMMVANSSNLIITVKPFNQKTCI 246 HSP 2 Score: 66.2402 bits (160), Expect = 2.441e-8 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = -1 Query: 2 IKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 190 +KSKF+AEFRR ++ +T +E+ ++E H L N+ F++QY+D E++LLPINND N R Sbjct: 6 VKSKFNAEFRRFSLDRSTIKKFEDLYQVVEKAHGLYNVKFILQYVDPKENALLPINNDKNCER 68
BLAST of Partitioning defective 6 vs. TrEMBL
Match: A0A2H8TUE7 (Partitioning defective protein 6 OS=Melanaphis sacchari OX=742174 GN=par-6_2 PE=4 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 1.401e-84 Identity = 155/246 (63.01%), Postives = 189/246 (76.83%), Query Frame = 2 Query: 206 EIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPL-RIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCL-APK 934 ++EIKSKFDAEFRRI + G+YE F+IL+E +H+L+ + FV+ Y D + LLPINNDDN RA+ L +PL RII+QRKG+S EL+GYG YK + +S IL K H IS DFR+VS+IIDVD+VP T RRV+L+++ S RPLGFYIRDG SVR +P+G+EKVPGIFISRL+ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMMVANS NLI+TVKP NQ T + AP+ Sbjct: 3 KLEIKSKFDAEFRRISLPKTDVGTYEQFRILIERLHKLIEVPFVLSYTDPKDGDLLPINNDDNLGRAV-LTAKPLLRIIVQRKGESLEELNGYGT-YKPRNIISSILGGTPSK-AKHLWISNPQDFRQVSAIIDVDVVPDTCRRVRLLKHGSERPLGFYIRDGTSVRVSPSGVEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVVGKTLDQVTDMMVANSHNLIVTVKPANQRTTMSAPR 245 HSP 2 Score: 80.4925 bits (197), Expect = 3.918e-13 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 +IKSKFDAEFRRI + G+YE F+IL+E +H+L+ + FV+ Y D + LLPINNDDN R Sbjct: 5 EIKSKFDAEFRRISLPKTDVGTYEQFRILIERLHKLIEVPFVLSYTDPKDGDLLPINNDDNLGR 68
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Match: pard6b (par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:103037072]) HSP 1 Score: 230.72 bits (587), Expect = 1.847e-71 Identity = 133/239 (55.65%), Postives = 173/239 (72.38%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMP--VSKILLAVNEKRNNHNNI-SILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LR+ +QRK ++ G + + K P ++ +LL + R I S+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP G+EKVPGIFISRL+ GLAESTGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITVKP NQ Sbjct: 16 VEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADIH-GDLLPINNDDNYHKAISTAAPLLRLFLQRKEEAEYSAFGTNSLTRKKTPAALAAVLLRPDANRKKPPVIISLPKDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVRVTPQGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANSHNLIITVKPANQ 253 HSP 2 Score: 62.3882 bits (150), Expect = 3.344e-10 Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 17 EVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADIH-GDLLPINNDDNYHK 79
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Match: pard6b (par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:103037072]) HSP 1 Score: 230.335 bits (586), Expect = 3.383e-71 Identity = 133/239 (55.65%), Postives = 173/239 (72.38%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMP--VSKILLAVNEKRNNHNNI-SILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++A+S LR+ +QRK ++ G + + K P ++ +LL + R I S+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP G+EKVPGIFISRL+ GLAESTGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITVKP NQ Sbjct: 16 VEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADIH-GDLLPINNDDNYHKAISTAAPLLRLFLQRKEEAEYSAFGTNSLTRKKTPAALAAVLLRPDANRKKPPVIISLPKDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVRVTPQGLEKVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANSHNLIITVKPANQ 253 HSP 2 Score: 62.3882 bits (150), Expect = 3.291e-10 Identity = 28/64 (43.75%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ + G ++ F LL+++H++ N+D ++ Y D + LLPINNDDNY++ Sbjct: 17 EVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVGYADIH-GDLLPINNDDNYHK 79
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Match: pard6gb (partitioning defective 6 homolog gamma-like [Source:NCBI gene;Acc:103026002]) HSP 1 Score: 227.639 bits (579), Expect = 1.042e-69 Identity = 134/236 (56.78%), Postives = 171/236 (72.46%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSK+ AEFRR +N G +E F L+ +IH++ N++ +I Y D + LLPINND+N+++A+S LRI IQR+ + G + + K V + +N KR H I + DFR VSSIIDVDI+P + RRV+L R+ S +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKPVNQ Sbjct: 19 VEVKSKYGAEFRRFSVNRVKPGKFEEFFKLIMHIHRIANMEVMIGYADVH-GDLLPINNDENFSKAVSTAHPLLRIFIQRQEEVDYSNFGTNTLTRKKKAVVPLRNDLNRKRP-HIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVSGKTLDQVTDMMIANSHNLIVTVKPVNQ 252 HSP 2 Score: 56.9954 bits (136), Expect = 1.810e-8 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSK+ AEFRR +N G +E F L+ +IH++ N++ +I Y D + LLPINND+N+++ Sbjct: 20 EVKSKYGAEFRRFSVNRVKPGKFEEFFKLIMHIHRIANMEVMIGYADVH-GDLLPINNDENFSK 82
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Match: pard6gb (partitioning defective 6 homolog gamma-like [Source:NCBI gene;Acc:103026002]) HSP 1 Score: 218.009 bits (554), Expect = 6.552e-66 Identity = 130/230 (56.52%), Postives = 165/230 (71.74%), Query Frame = 2 Query: 227 FDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 + AEFRR +N G +E F L+ +IH++ N++ +I Y D + LLPINND+N+++A+S LRI IQR+ + G + + K V + +N KR H I + DFR VSSIIDVDI+P + RRV+L R+ S +PLGFYIRDG SVR TP+G+EKVPGIFISR++ GLAESTGLLAVNDEV+EVNGIEV GKTLDQVTDMM+ANS NLI+TVKPVNQ Sbjct: 27 YGAEFRRFSVNRVKPGKFEEFFKLIMHIHRIANMEVMIGYADVH-GDLLPINNDENFSKAVSTAHPLLRIFIQRQEEVDYSNFGTNTLTRKKKAVVPLRNDLNRKRP-HIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVSGKTLDQVTDMMIANSHNLIVTVKPVNQ 254 HSP 2 Score: 49.6766 bits (117), Expect = 3.537e-6 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = -1 Query: 2 FDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 178 + AEFRR +N G +E F L+ +IH++ N++ +I Y D + LLPINND+N+++ Sbjct: 27 YGAEFRRFSVNRVKPGKFEEFFKLIMHIHRIANMEVMIGYADVH-GDLLPINNDENFSK 84
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Match: pard6a (par-6 family cell polarity regulator alpha [Source:NCBI gene;Acc:103040369]) HSP 1 Score: 215.312 bits (547), Expect = 2.599e-65 Identity = 126/241 (52.28%), Postives = 170/241 (70.54%), Query Frame = 2 Query: 194 TCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 + + +E+KSKF+AE+RR + GS++ F LL+ IH++ +D ++ Y D + LLPINNDDN+++ALS LRIIIQ++ + + + K ++ L +K I + DFR++SSIIDVDI+P T RRV+L ++ + +PLGFYIRDGVSVR TP G+EKVPG+FISRL+ GLAESTGLL VNDE++EVNGI+V GK+LDQVTDMMVANS NLI+TVKP NQ Sbjct: 11 STDTVVEVKSKFEAEYRRFALKKNGAGSFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDDNFHKALSSANPLLRIIIQKRDVDEPVVFPTNSLQRRKKGLAG-LRPSQQKNKPALLIGMPQDFRQISSIIDVDILPETHRRVRLHKHGTHKPLGFYIRDGVSVRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVAGKSLDQVTDMMVANSHNLIVTVKPANQ 249 HSP 2 Score: 57.3806 bits (137), Expect = 1.119e-8 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF+AE+RR + GS++ F LL+ IH++ +D ++ Y D + LLPINNDDN+++ Sbjct: 17 EVKSKFEAEYRRFALKKNGAGSFQEFYQLLQTIHRIPGVDVLLGYADIH-GDLLPINNDDNFHK 79
BLAST of Partitioning defective 6 vs. Ensembl Sea Lamprey
Match: scrib (scribble planar cell polarity protein [Source:NCBI gene;Acc:368473]) HSP 1 Score: 48.1358 bits (113), Expect = 3.735e-6 Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 2 Query: 617 PVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVR 832 P + L++ PLG I G + P GI+K PGIFIS++IA G A T + V D ++ VNG++VR Sbjct: 799 PYPVEEIVLLKTDG-PLGLSIVGGSDHSSHPFGIDK-PGIFISKIIADGQAAKTN-MRVGDRILSVNGLDVR 867 HSP 2 Score: 46.9802 bits (110), Expect = 8.715e-6 Identity = 30/90 (33.33%), Postives = 52/90 (57.78%), Query Frame = 2 Query: 635 VKLMRNSSRPLGFYIRDGVSVRATP-NGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVK 901 V+L+RN R LGF I G +TP G GIFISR+ G A+ G +AV D V+ +NG+++ DQ ++ ++++++ + ++ Sbjct: 670 VRLLRNE-RGLGFSIAGGKG--STPFKGSHS--GIFISRIAEGGTADLEGTMAVADRVLAINGVDMTEARHDQAVALLTSSATSITMLLQ 754
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Match: EDO35316 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLU2]) HSP 1 Score: 218.394 bits (555), Expect = 4.689e-69 Identity = 133/241 (55.19%), Postives = 168/241 (69.71%), Query Frame = 2 Query: 224 KFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGK---SYGELHG------YGQIY-KSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMR-NSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +FDAEFRR ++ SYE F + ++H+L NI+ + Y D + LLPINNDDN RAL+ LR+ +QRKG+ S+ ++ G + I SK +S++ NIS DFRRVS+I+DVDI+P T RRV+L++ NS +PLGFYIRDG SVR TP+G+E+VPGIFISRL+ GLAESTGLLAVNDEV+EVNGI+V GKTLDQVTDMM+ANS NLIITVKP NQ Sbjct: 1 QFDAEFRRFPLDREKFKSYERFYDYVRSMHKLENIEITVWYTDMH-GDLLPINNDDNLQRALNTAKPLLRLFLQRKGQYQPSFSKISGVKKRTLFSTISNPSKTTISRV------------NISTPQDFRRVSAIVDVDILPETHRRVRLLKHNSDKPLGFYIRDGTSVRVTPSGLERVPGIFISRLVPGGLAESTGLLAVNDEVLEVNGIDVSGKTLDQVTDMMIANSHNLIITVKPANQ 228 HSP 2 Score: 50.8322 bits (120), Expect = 2.873e-7 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 2 KFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 181 +FDAEFRR ++ SYE F + ++H+L NI+ + Y D + LLPINNDDN R Sbjct: 1 QFDAEFRRFPLDREKFKSYERFYDYVRSMHKLENIEITVWYTDMH-GDLLPINNDDNLQR 59
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Match: EDO38241 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDK0]) HSP 1 Score: 52.373 bits (124), Expect = 5.493e-9 Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 2 Query: 641 LMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITV 898 + R ++PLGF+IR G +G + G+F+SR+ L + G LAV DE++EVNG+ + G + V ++ LI+T+ Sbjct: 1 IKRTHNQPLGFFIRQG-------DGWGRKDGVFVSRITPGSLVDCDGSLAVGDEILEVNGVCLAGFRVHDVVH-LIQIPKRLILTI 78
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Match: EDO42741 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0J0]) HSP 1 Score: 52.373 bits (124), Expect = 1.808e-7 Identity = 32/91 (35.16%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 629 RRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVK 901 R ++L R LGFYIR G +G E+ GIF+SR++ + LL V DE+++VN ++VR ++ V+ +M + LI+T+K Sbjct: 110 RTIELKRKPGESLGFYIRQG-------DGWEREDGIFVSRVVLGTDVDVFELLRVGDEIVKVNKVDVRTMGIEDVSALMQM-TRRLILTLK 192
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Match: EDO33432 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SS78]) HSP 1 Score: 51.2174 bits (121), Expect = 7.238e-7 Identity = 29/87 (33.33%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 641 LMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVK 901 +++ + PLGF I G + P G+++ PGIFIS+++ G+A +T L + D V+ VNG ++R T ++AN S + + V+ Sbjct: 842 ILKKGNNPLGFSIVGGSDHASHPFGMDE-PGIFISKIVPTGVAATTN-LKIGDRVLMVNGKDMRNATHQDAVAALIANVSLIKLLVR 926
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Match: EDO33577 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRU3]) HSP 1 Score: 48.1358 bits (113), Expect = 5.142e-6 Identity = 27/94 (28.72%), Postives = 49/94 (52.13%), Query Frame = 2 Query: 635 VKLMR--NSSRPLGFYIR--DGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKP 904 VK++R S PLG ++ DG + I R++ G AE +GLL DE++E+NG+ ++GK++ +V +++ + L + P Sbjct: 195 VKIVRIDKSCDPLGATVKNEDG--------------AVLIGRIVKGGAAEKSGLLHEGDEILEINGVHMKGKSVSEVCELLADMNGTLTFLLVP 274
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Match: pard6b (par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:101159990]) HSP 1 Score: 226.098 bits (575), Expect = 1.585e-69 Identity = 131/237 (55.27%), Postives = 169/237 (71.31%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNI-SILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR ++ + G ++ F LL+++H++ N++ ++ Y D + LLPINNDDNY++A+S LR+ +QRK ++ K +S +LL + R H I S+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP G+EKVP IFISRL+ GLAESTGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITVKP NQ Sbjct: 16 VEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVGYADVH-GDLLPINNDDNYHKAISTANPLLRLFLQRKEEAENTFATDPLTRKKNTVLSAVLLRPDATRKKHPVIISLPKDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVRVTPQGLEKVPAIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANSHNLIITVKPANQ 251 HSP 2 Score: 61.2326 bits (147), Expect = 7.451e-10 Identity = 27/64 (42.19%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ + G ++ F LL+++H++ N++ ++ Y D + LLPINNDDNY++ Sbjct: 17 EVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVGYADVH-GDLLPINNDDNYHK 79
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Match: pard6b (par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:101159990]) HSP 1 Score: 226.098 bits (575), Expect = 2.096e-69 Identity = 131/237 (55.27%), Postives = 169/237 (71.31%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNI-SILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKF AEFRR ++ + G ++ F LL+++H++ N++ ++ Y D + LLPINNDDNY++A+S LR+ +QRK ++ K +S +LL + R H I S+ DFR VSSIIDVDI+P T RRV+L ++ +PLGFYIRDG SVR TP G+EKVP IFISRL+ GLAESTGLLAVNDEV+EVNGIEV GK+LDQVTDMM+ANS NLIITVKP NQ Sbjct: 16 VEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVGYADVH-GDLLPINNDDNYHKAISTANPLLRLFLQRKEEAENTFATDPLTRKKNTVLSAVLLRPDATRKKHPVIISLPKDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSVRVTPQGLEKVPAIFISRLVPGGLAESTGLLAVNDEVLEVNGIEVAGKSLDQVTDMMIANSHNLIITVKPANQ 251 HSP 2 Score: 61.2326 bits (147), Expect = 7.659e-10 Identity = 27/64 (42.19%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSKF AEFRR ++ + G ++ F LL+++H++ N++ ++ Y D + LLPINNDDNY++ Sbjct: 17 EVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVELLVGYADVH-GDLLPINNDDNYHK 79
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Match: pard6gb (partitioning defective 6 homolog gamma [Source:NCBI gene;Acc:101169467]) HSP 1 Score: 226.483 bits (576), Expect = 4.237e-69 Identity = 132/243 (54.32%), Postives = 174/243 (71.60%), Query Frame = 2 Query: 188 YLTCNMEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 ++ CN +E+KSK+ AEFRR ++ G +E F LL +IH++ N++ +I Y D + LLPINNDDN+ +A+S LRI IQR+ + G I + K V + + +R + +I + DFR VSSIIDVDI+P + RRV+L R+ S +PLGFYIRDG S+R TP+G+EKVPGIFISR++ GLAESTGLLA+NDEV+EVNGIEV GK+LDQVTDMM+ANS NLI+TVKPVNQ Sbjct: 13 HIDCNA-VEVKSKYGAEFRRFSVDRVKPGRFEEFYKLLLHIHRIANMEMMIGYADVH-GDLLPINNDDNFCKAVSTAHPLLRIFIQRQEEVDYSTFGTNTITRKKKAVVALRNSDISRRRPNIHIGMPHDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTSMRVTPHGVEKVPGIFISRMVPGGLAESTGLLAINDEVLEVNGIEVSGKSLDQVTDMMIANSHNLIVTVKPVNQ 253 HSP 2 Score: 57.3806 bits (137), Expect = 1.507e-8 Identity = 28/64 (43.75%), Postives = 43/64 (67.19%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 ++KSK+ AEFRR ++ G +E F LL +IH++ N++ +I Y D + LLPINNDDN+ + Sbjct: 20 EVKSKYGAEFRRFSVDRVKPGRFEEFYKLLLHIHRIANMEMMIGYADVH-GDLLPINNDDNFCK 82
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Match: pard6gb (partitioning defective 6 homolog gamma [Source:NCBI gene;Acc:101169467]) HSP 1 Score: 215.312 bits (547), Expect = 1.075e-64 Identity = 126/231 (54.55%), Postives = 165/231 (71.43%), Query Frame = 2 Query: 224 KFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 ++ AEFRR ++ G +E F LL +IH++ N++ +I Y D + LLPINNDDN+ +A+S LRI IQR+ + G I + K V + + +R + +I + DFR VSSIIDVDI+P + RRV+L R+ S +PLGFYIRDG S+R TP+G+EKVPGIFISR++ GLAESTGLLA+NDEV+EVNGIEV GK+LDQVTDMM+ANS NLI+TVKPVNQ Sbjct: 27 QYGAEFRRFSVDRVKPGRFEEFYKLLLHIHRIANMEMMIGYADVH-GDLLPINNDDNFCKAVSTAHPLLRIFIQRQEEVDYSTFGTNTITRKKKAVVALRNSDISRRRPNIHIGMPHDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTSMRVTPHGVEKVPGIFISRMVPGGLAESTGLLAINDEVLEVNGIEVSGKSLDQVTDMMIANSHNLIVTVKPVNQ 256 HSP 2 Score: 50.8322 bits (120), Expect = 1.655e-6 Identity = 25/60 (41.67%), Postives = 39/60 (65.00%), Query Frame = -1 Query: 2 KFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 181 ++ AEFRR ++ G +E F LL +IH++ N++ +I Y D + LLPINNDDN+ + Sbjct: 27 QYGAEFRRFSVDRVKPGRFEEFYKLLLHIHRIANMEMMIGYADVH-GDLLPINNDDNFCK 85
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Match: pard6a (partitioning defective 6 homolog alpha [Source:NCBI gene;Acc:101168439]) HSP 1 Score: 196.823 bits (499), Expect = 2.187e-58 Identity = 117/239 (48.95%), Postives = 166/239 (69.46%), Query Frame = 2 Query: 209 IEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILL---AVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSS-RPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQ 913 +E+KSKFDAE+RR + + G+++ F L+NIH + +D ++ Y D + LLPINND+N+ +A+S LRI+I +K + + + + K ++ L A + + + I +FR++SSIIDVDI+P +RRV+L ++ + +PLGFYIRDGVS+R T G+EK PG+FISR++ GLAESTGLLAVNDE++EVNGI+V GK+LDQVT MMVANS NLI+TVKP NQ Sbjct: 18 VEVKSKFDAEYRRFGLKRSGPGNFQEFYRFLQNIHHIRGMDVLLGYADIH-GDLLPINNDENFYKAVSSANPLLRIVISKK-EDDSSVFATNSLQRRKKGLALTGLNPGATHPRGKSGPLIGPPQNFRQISSIIDVDILPEAYRRVRLHKHGTNKPLGFYIRDGVSMRVTAQGVEKAPGVFISRVVRGGLAESTGLLAVNDEILEVNGIDVAGKSLDQVTAMMVANSHNLIVTVKPANQ 254 HSP 2 Score: 55.4546 bits (132), Expect = 4.785e-8 Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = -1 Query: 8 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNY 193 ++KSKFDAE+RR + + G+++ F L+NIH + +D ++ Y D + LLPINND+N+ Sbjct: 19 EVKSKFDAEYRRFGLKRSGPGNFQEFYRFLQNIHHIRGMDVLLGYADIH-GDLLPINNDENF 79
BLAST of Partitioning defective 6 vs. Planmine SMEST
Match: SMESG000026500.1 (SMESG000026500.1) HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 2 Query: 203 MEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFXXXXXXXXXXXXPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLAPKXXXXXXXXXHRSQHKQTDNSSDYQIMREYANDSSTLYTL 1051 MEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFRRVSSIIDVDIVPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLAPKSASNSANSSHRSQHKQTDNSSDYQIMREYANDSSTLYTL Sbjct: 1 MEIEIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNRALSLKMRPLRIIIQRKGKSYGELHGYGQIYKSKMPVSKILLAVNEKRNNHNNISILDDFRRVSSIIDVDIVPVTFRRVKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITVKPVNQNTCLAPKSASNSANSSHRSQHKQTDNSSDYQIMREYANDSSTLYTL 283 HSP 2 Score: 130.568 bits (327), Expect = 1.294e-34 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = -1 Query: 2 QIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 193 +IKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR Sbjct: 4 EIKSKFDAEFRRIRINLATHGSYENFKILLENIHQLLNIDFVIQYIDENESSLLPINNDDNYNR 67
BLAST of Partitioning defective 6 vs. Planmine SMEST
Match: SMESG000013165.1 (SMESG000013165.1) HSP 1 Score: 52.373 bits (124), Expect = 6.215e-7 Identity = 29/88 (32.95%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 635 VKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITV 898 VK+++ ++ LG I G+ + P GI PG+FIS++ KG A++TG L + D +I VNG ++ T D+ ++V ++++++ V Sbjct: 600 VKIIKTGAQ-LGLCICGGIDHYSHPFGIND-PGVFISKISPKGAAKATGKLRIGDRIISVNGHDITKATHDEAILLIVQANNDILLEV 685
BLAST of Partitioning defective 6 vs. Planmine SMEST
Match: SMESG000013165.1 (SMESG000013165.1) HSP 1 Score: 51.9878 bits (123), Expect = 6.517e-7 Identity = 29/88 (32.95%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 635 VKLMRNSSRPLGFYIRDGVSVRATPNGIEKVPGIFISRLIAKGLAESTGLLAVNDEVIEVNGIEVRGKTLDQVTDMMVANSSNLIITV 898 VK+++ ++ LG I G+ + P GI PG+FIS++ KG A++TG L + D +I VNG ++ T D+ ++V ++++++ V Sbjct: 585 VKIIKTGAQ-LGLCICGGIDHYSHPFGIND-PGVFISKISPKGAAKATGKLRIGDRIISVNGHDITKATHDEAILLIVQANNDILLEV 670 The following BLAST results are available for this feature:
BLAST of Partitioning defective 6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Partitioning defective 6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Partitioning defective 6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Partitioning defective 6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Partitioning defective 6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Partitioning defective 6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023334 ID=SMED30023334|Name=Partitioning defective 6|organism=Schmidtea mediterranea sexual|type=transcript|length=1306bpback to top protein sequence of SMED30023334-orf-1 >SMED30023334-orf-1 ID=SMED30023334-orf-1|Name=SMED30023334-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=307bp MSSQINSYPPEFGIELAFYLTCNMEIEIKSKFDAEFRRIRINLATHGSYEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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