Cell cycle associated protein 1a
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023258 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Match: CAPRIN1 (cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]) HSP 1 Score: 55.4546 bits (132), Expect = 1.898e-7 Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 113 ALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 A + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 43 ATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 229
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Match: CAPRIN1 (cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]) HSP 1 Score: 55.4546 bits (132), Expect = 1.898e-7 Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 113 ALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 A + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 43 ATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 229
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Match: CAPRIN1 (cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]) HSP 1 Score: 55.0694 bits (131), Expect = 2.630e-7 Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 2 Query: 236 LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 7 LNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 148
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Match: CAPRIN1 (cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]) HSP 1 Score: 55.0694 bits (131), Expect = 2.753e-7 Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 113 ALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 A + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 43 ATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 229
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Match: CAPRIN1 (cell cycle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6743]) HSP 1 Score: 55.0694 bits (131), Expect = 2.753e-7 Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 113 ALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 A + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 43 ATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 229
BLAST of Cell cycle associated protein 1a vs. Ensembl Zebrafish
Match: caprin1b (cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]) HSP 1 Score: 61.6178 bits (148), Expect = 1.635e-9 Identity = 63/200 (31.50%), Postives = 112/200 (56.00%), Query Frame = 2 Query: 92 NCLMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQ--------SKLLSENYIEVGELDILKELFCE-----IHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSK 640 N + SN L + E +K V+++ EKK RN++K+K+KLD+Y+ ++ LN+DQ A+SKYQEV+ NLE EL L ++ +KT+KK ++E+L+ + E ++ V++ + L+R+ D Q + LL+E+ ++ LD +L I ++++ +++ S+ L L EG +KP+ T K Sbjct: 26 NQITASNQLTGTQS--EAMKQVMVVLEKKVRNMEKKKSKLDDYQARSSKGERLNQDQLEALSKYQEVIHNLEFTRELQKSFLALGQEIQKTVKKAARREQLQREESEQKRLKRVLELQFALDRLGDESVRQELLQGDGETSLLTES--DLTSLDEFYKLVGPERDQNIRLTDQ--YQEASQHLWELLEGKDKPVAGTTYK 219
BLAST of Cell cycle associated protein 1a vs. Ensembl Zebrafish
Match: caprin1b (cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]) HSP 1 Score: 61.6178 bits (148), Expect = 1.635e-9 Identity = 63/200 (31.50%), Postives = 112/200 (56.00%), Query Frame = 2 Query: 92 NCLMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQ--------SKLLSENYIEVGELDILKELFCE-----IHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSK 640 N + SN L + E +K V+++ EKK RN++K+K+KLD+Y+ ++ LN+DQ A+SKYQEV+ NLE EL L ++ +KT+KK ++E+L+ + E ++ V++ + L+R+ D Q + LL+E+ ++ LD +L I ++++ +++ S+ L L EG +KP+ T K Sbjct: 26 NQITASNQLTGTQS--EAMKQVMVVLEKKVRNMEKKKSKLDDYQARSSKGERLNQDQLEALSKYQEVIHNLEFTRELQKSFLALGQEIQKTVKKAARREQLQREESEQKRLKRVLELQFALDRLGDESVRQELLQGDGETSLLTES--DLTSLDEFYKLVGPERDQNIRLTDQ--YQEASQHLWELLEGKDKPVAGTTYK 219
BLAST of Cell cycle associated protein 1a vs. Ensembl Zebrafish
Match: caprin2 (caprin family member 2 [Source:NCBI gene;Acc:407729]) HSP 1 Score: 50.8322 bits (120), Expect = 4.163e-6 Identity = 46/167 (27.54%), Postives = 78/167 (46.71%), Query Frame = 2 Query: 221 KKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERI--------FDHQKVQSKLLSENYIEVGELDILKELFC--EIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIE 691 KK LNEDQ AV KY EVV NL+ EL +D K +K +QE+ E S + +++ Y+L + F + + S +S +E G +D+ + C + IS + ++ + L EG KP+ G++ +H K++L+R ++ Sbjct: 92 KKGEKLNEDQLEAVGKYDEVVHNLKFAKELQKTIGSLTQDLLKAQRKAVRQEKQMKTDEEKSRLSLMLQVQYVLHSLQREDVRKNFCNTRQYSCYMSTQDME-GLMDLASLVGCKRDYSISLEDQMRRAAIVYWELLEGNEKPV-AGSTYKHM-----KEKLLRLVD 251
BLAST of Cell cycle associated protein 1a vs. Ensembl Mouse
Match: Caprin1 (cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]) HSP 1 Score: 57.7658 bits (138), Expect = 2.867e-8 Identity = 64/190 (33.68%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD---HQKVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ + ALK I Sbjct: 47 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTTYK-ALKEI 234
BLAST of Cell cycle associated protein 1a vs. Ensembl Mouse
Match: Caprin1 (cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]) HSP 1 Score: 57.7658 bits (138), Expect = 2.867e-8 Identity = 64/190 (33.68%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD---HQKVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ + ALK I Sbjct: 47 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTTYK-ALKEI 234
BLAST of Cell cycle associated protein 1a vs. UniProt/SwissProt
Match: sp|Q60865|CAPR1_MOUSE (Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 2.005e-7 Identity = 64/190 (33.68%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD---HQKVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ + ALK I Sbjct: 47 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTTYK-ALKEI 234
BLAST of Cell cycle associated protein 1a vs. UniProt/SwissProt
Match: sp|Q5M9G3|CAPR1_RAT (Caprin-1 OS=Rattus norvegicus OX=10116 GN=Caprin1 PE=1 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 2.023e-7 Identity = 64/190 (33.68%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD---HQKVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ + ALK I Sbjct: 47 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDDVRTDLKQGLSGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTTYK-ALKEI 234
BLAST of Cell cycle associated protein 1a vs. UniProt/SwissProt
Match: sp|Q1LZB6|CAPR1_BOVIN (Caprin-1 OS=Bos taurus OX=9913 GN=CAPRIN1 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.265e-7 Identity = 64/190 (33.68%), Postives = 107/190 (56.32%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ + ALK I Sbjct: 47 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLADPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTTYK-ALKEI 234
BLAST of Cell cycle associated protein 1a vs. UniProt/SwissProt
Match: sp|Q14444|CAPR1_HUMAN (Caprin-1 OS=Homo sapiens OX=9606 GN=CAPRIN1 PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 1.322e-6 Identity = 61/188 (32.45%), Postives = 103/188 (54.79%), Query Frame = 2 Query: 113 ALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQ---KVQSKLLSENYIEVGELDILKELF----CEIHISEKGN--WKKCSEQLQSLFEGGNKPLDLGTS 637 A + E +K +L + +KK RNL+K+K KLD+Y+++ + LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ Y+L+++ D + ++ L + EL +L E + E +S + N ++ S L L EG KP+ GT+ Sbjct: 43 ATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPV-CGTT 229
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Match: A0A3Q2YSU2 (Cell cycle associated protein 1a OS=Hippocampus comes OX=109280 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.987e-7 Identity = 64/197 (32.49%), Postives = 117/197 (59.39%), Query Frame = 2 Query: 140 ERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQ---------SKLLSENYIEVGELDILKELF-----CEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDEL 676 + +K VL + +KK RN++K+K+KLD+Y+ K + LN+DQ A+SKYQE+++N+E EL + L ++ +KTLKK ++++L+ + E ++ V++ +LL+++ DH Q S LL++ ++ LD +L C++ ++E+ +++ S L L EG +K + GTS + ALK I ++ L Sbjct: 25 DAMKQVLGVLDKKVRNMEKKKSKLDDYQAKKNKGESLNQDQLEALSKYQEILTNIEFARELQKIFLTLGQEIQKTLKKTARRQQLQREEMEQRRLKTVLELQFLLDQLGDHNVRQDLTRPDASGSSLLTD--ADLASLDEFYKLVGPDRNCDVRLTEQ--YEEASLHLWELLEGRDKAV-AGTSYK-ALKDIMENLL 215
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Match: A0A3M7R8J9 (Caprin-1 isoform X1 OS=Brachionus plicatilis OX=10195 GN=BpHYR1_051493 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 9.372e-7 Identity = 80/207 (38.65%), Postives = 111/207 (53.62%), Query Frame = 2 Query: 140 ERLKNVLIIFEXXXXXXXXXXXXXXEYK-KKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVG----ELDILKELFCEIHISEKG-NWKKCSEQLQS--LF--EGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDW 730 E +K LII EKK RNL+KR++KLDEYK K LNEDQ +AVSKY+EVV LEL EL + DA K K+ K+E+LE + ++ K LLE F + V++ L+E+ + EL +L E I SE G N +K S + LF EG NKP+ ++E + ++ ++L + EKI L N W Sbjct: 58 EFIKQSLIIIEKKVRNLEKRRSKLDEYKASKTPLNEDQLLAVSKYEEVVRTLELARELEKQFISLSNDAMKQQKRQAKKEQLEREEIIKERLKEAHKINSLLE-TFGDENVRNNFLTESSGAIKLTEQELSMLDEFHKLIEPSEIGDNLEKSSTEAADHMLFTIEGRNKPI-TSFNQESTGQQVTYNDLKKLFEKI-----LTCNYW 257
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Match: A0A452GL87 (Cell cycle associated protein 1 OS=Gopherus agassizii OX=38772 GN=CAPRIN1 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.589e-6 Identity = 66/191 (34.55%), Postives = 108/191 (56.54%), Query Frame = 2 Query: 131 IALERLKNVLIIFEXXXXXXXXXXXXXXEYK----KKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKL-LSENYIEV---GELDILKELFCEIHISEKGN------WKKCSEQLQSLFEGGNKPLDLGTSKEHALKSI 661 + E +K +L + +KK RNL+K+K KLD+Y+ K LN+DQ AVSKYQEV +NLE EL + +D +KT+KK ++E+L + E ++ V++ ++L+++ DH+ V+S L N + V EL +L E + + N +++ S L L EG +KP+ GT+ + ALK + Sbjct: 45 VQTEAMKQILGVIDKKLRNLEKKKGKLDDYQDRMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQFILDKLGDHE-VRSDLKQGSNGVPVLTEEELTMLDEFYKLVDPERDMNMRLNEQYEQASIHLWDLLEGKDKPV-CGTTYK-ALKDV 232
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Match: A0A3N0XE15 (Caprin-1 OS=Anabarilius grahami OX=495550 GN=DPX16_15492 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.650e-6 Identity = 64/197 (32.49%), Postives = 108/197 (54.82%), Query Frame = 2 Query: 92 NCLMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLL----SENYIEVGELDILKELFCEIHISEKGN------WKKCSEQLQSLFEGGNKPLDLGTSK 640 N + SN L + E +K VL++ EKK RN++K+K+KLD+Y+ +N LN+DQ A+SKYQEV+ NLE EL+ L ++ +KT+KK ++E+L + E ++ V++ +LL+R+ D + V+ +LL + + +L L E + + N +++ S+ L L G KP+ T K Sbjct: 26 NQITASNQLTGTQS--EAMKQVLVVLEKKVRNMEKKKSKLDDYQARNSKGERLNQDQLEALSKYQEVIHNLEFARELHKSFLALGQEIQKTVKKAARREQLHREEVEHKRLKRVLELQFLLDRLGD-ESVRQELLQGAGGPSLLTESDLTSLDEFYKLVGPERDQNIRLTDQYQEASQHLWELLAGKEKPVAGTTYK 219
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Match: Q802U4 (Cell cycle associated protein 1 OS=Danio rerio OX=7955 GN=caprin1b PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.476e-6 Identity = 62/197 (31.47%), Postives = 110/197 (55.84%), Query Frame = 2 Query: 92 NCLMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKND----LNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLS----ENYIEVGELDILKELFCEIHISEKGN------WKKCSEQLQSLFEGGNKPLDLGTSK 640 N + SN L + E +K V+++ EKK RN++K+K+KLD+Y+ ++ LN+DQ A+SKYQEV+ +LE EL L ++ +KT+KK ++E+L+ + E ++ V++ + L+R+ D + V+ +LL + + G+L L E + + N +++ S+ L L EG +KP+ T K Sbjct: 26 NQITASNQLTGTQS--EAMKQVMVVLEKKVRNMEKKKSKLDDYQARSSKGERLNQDQLEALSKYQEVIHSLEFTRELQKSFLALGQEIQKTVKKAARREQLQREESEQKRLKRVLELQFALDRLGD-ESVRQELLQGDGETSLLTEGDLTSLDEFYKLVGPERDQNIRLTDQYQEASQHLWELLEGKDKPVAGTTYK 219
BLAST of Cell cycle associated protein 1a vs. Ensembl Cavefish
Match: caprin1b (caprin-1-like [Source:NCBI gene;Acc:103035197]) HSP 1 Score: 61.6178 bits (148), Expect = 1.472e-9 Identity = 63/201 (31.34%), Postives = 110/201 (54.73%), Query Frame = 2 Query: 140 ERLKNVLIIFEXXXXXXXXXXXXXXEYK----KKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQ--------SKLLSENYIEVGELDILKELFC---EIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKI 697 E +K VL + EKK RN++K+K+KLD+Y+ K LN DQ A+SKYQEV NLE EL+ L +D +K +KK ++E+L+ + + + + +++ +LL+R+ D Q LL+E+ E+ LD +L + +I +++ S+ L EG +KP+ +GT+ +H + + + C E++ Sbjct: 40 EAMKQVLGVIEKKVRNMEKKKSKLDDYQARINKGERLNHDQLDALSKYQEVSHNLEFARELHKSFLALNQDIQKAVKKAARREQLQREEVDQARLRKLLEVQFLLDRLGDEAMRQELLRSAGRPALLTES--ELAALDDFYKLVGPERDQNIRLTDQYQEASQHFWDLLEGKDKPV-VGTTYKHLKEMLERVLQSGCFERV 237
BLAST of Cell cycle associated protein 1a vs. Ensembl Cavefish
Match: caprin1b (caprin-1-like [Source:NCBI gene;Acc:103035197]) HSP 1 Score: 61.6178 bits (148), Expect = 1.472e-9 Identity = 63/201 (31.34%), Postives = 110/201 (54.73%), Query Frame = 2 Query: 140 ERLKNVLIIFEXXXXXXXXXXXXXXEYK----KKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQ--------SKLLSENYIEVGELDILKELFC---EIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKI 697 E +K VL + EKK RN++K+K+KLD+Y+ K LN DQ A+SKYQEV NLE EL+ L +D +K +KK ++E+L+ + + + + +++ +LL+R+ D Q LL+E+ E+ LD +L + +I +++ S+ L EG +KP+ +GT+ +H + + + C E++ Sbjct: 40 EAMKQVLGVIEKKVRNMEKKKSKLDDYQARINKGERLNHDQLDALSKYQEVSHNLEFARELHKSFLALNQDIQKAVKKAARREQLQREEVDQARLRKLLEVQFLLDRLGDEAMRQELLRSAGRPALLTES--ELAALDDFYKLVGPERDQNIRLTDQYQEASQHFWDLLEGKDKPV-VGTTYKHLKEMLERVLQSGCFERV 237
BLAST of Cell cycle associated protein 1a vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005425.1 (pep scaffold:Pmarinus_7.0:GL476588:421313:428337:1 gene:ENSPMAG00000004905.1 transcript:ENSPMAT00000005425.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.373 bits (124), Expect = 1.364e-7 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 215 EYKKK-ND---LNEDQQMAVSKYQEVVSNLELV-DELNTLA-LQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLS----ENYIEVGELDILKELFCEIH------ISEKGNWKKCSEQLQSLFEGGNKPLDLGTSK 640 +YK K ND LN+DQQ AV+KY EVVS+LE D L T A L Q D +K KK ++E L + E + V++ Y+L+ + D + + L+ + E+ L +L+ ++ S + ++ S+ L L EG +KP+ T K Sbjct: 7 DYKAKLNDGHALNQDQQEAVAKYMEVVSSLEFARDLLKTFASLNQ--DVQKVQKKAARREHLLREEAEQKRLRLVLEVQYILDSLGDGEAARLDFLAGQNGAALLLTQEMAYLDDLYKLVNPERVETTSFETQMEQASQHLWDLVEGKDKPVAGTTYK 162
BLAST of Cell cycle associated protein 1a vs. Ensembl Medaka
Match: caprin1b (cell cycle associated protein 1 [Source:NCBI gene;Acc:101158019]) HSP 1 Score: 53.1434 bits (126), Expect = 4.942e-7 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 98 LMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYK-KKN---DLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD 457 LM S A Q E LK VL I +KK RN++K+K+KLD+Y KKN LN+DQ A+SKYQEV++NLE EL + +D +K +KK ++E+L + E ++ V++ ++L+R+ D Sbjct: 24 LMGSFAQGGQS---EVLKQVLCIIDKKVRNMEKKKSKLDDYSVKKNKGEGLNQDQLEALSKYQEVMNNLEFARELQKTFITLGQDIQKVVKKSARREQLVREEAEQRRLKTVLEVQFILDRLGD 144
BLAST of Cell cycle associated protein 1a vs. Ensembl Medaka
Match: caprin1b (cell cycle associated protein 1 [Source:NCBI gene;Acc:101158019]) HSP 1 Score: 53.1434 bits (126), Expect = 5.068e-7 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 98 LMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYK-KKN---DLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD 457 LM S A Q E LK VL I +KK RN++K+K+KLD+Y KKN LN+DQ A+SKYQEV++NLE EL + +D +K +KK ++E+L + E ++ V++ ++L+R+ D Sbjct: 24 LMGSFAQGGQS---EVLKQVLCIIDKKVRNMEKKKSKLDDYSVKKNKGEGLNQDQLEALSKYQEVMNNLEFARELQKTFITLGQDIQKVVKKSARREQLVREEAEQRRLKTVLEVQFILDRLGD 144
BLAST of Cell cycle associated protein 1a vs. Ensembl Medaka
Match: caprin1b (cell cycle associated protein 1 [Source:NCBI gene;Acc:101158019]) HSP 1 Score: 53.1434 bits (126), Expect = 5.385e-7 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 98 LMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYK-KKN---DLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFD 457 LM S A Q E LK VL I +KK RN++K+K+KLD+Y KKN LN+DQ A+SKYQEV++NLE EL + +D +K +KK ++E+L + E ++ V++ ++L+R+ D Sbjct: 24 LMGSFAQGGQS---EVLKQVLCIIDKKVRNMEKKKSKLDDYSVKKNKGEGLNQDQLEALSKYQEVMNNLEFARELQKTFITLGQDIQKVVKKSARREQLVREEAEQRRLKTVLEVQFILDRLGD 144
BLAST of Cell cycle associated protein 1a vs. Ensembl Medaka
Match: orla-b2m (caprin family member 2 [Source:NCBI gene;Acc:101161935]) HSP 1 Score: 51.2174 bits (121), Expect = 2.299e-6 Identity = 45/164 (27.44%), Postives = 83/164 (50.61%), Query Frame = 2 Query: 233 DLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSEN----YIEVGELDILKELFCEIHISEKGNWKKCSEQLQ-------SLFEGGNKPLDLGTSKEHALKSISKDELMRCIE 691 +LN+DQ+ AV K++EV+ NL+ EL+ ++ K KKV K++++E E + V+K +YLL + + +Q L++ N +I +L L +L + + ++ N EQ+Q L EG ++P+ T K + K+E+ R ++ Sbjct: 89 ELNKDQKAAVEKFEEVLHNLDFARELHKTLDGLTQNLLKAQKKVVKKDQVERVEAERRRLAMVLKIHYLLGNM-QQEHIQKDLMTGNNQAPHIPSQKLHSLNQLAAMLGV-QRDNGLSLDEQMQKAALVYMDLLEGKDQPVAGSTYK------LLKEEITRLMD 244
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Match: SMESG000043092.1 (SMESG000043092.1) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 420/437 (96.11%), Postives = 421/437 (96.34%), Query Frame = 2 Query: 77 MNCVNNCLMMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQXXXXXXXXXXXXXXXXXXXVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKXXXXXXXXXXXXXXXXXAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFXXXXXXXXXXXXXXXXXXX---DNRQADELLTSMQ 1378 MNCVNNCLMMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYI+VGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQ AGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSR SR DNRQADELLTSMQ Sbjct: 1 MNCVNNCLMMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIDVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQAAGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRYSRPSRGRGRGRGNGRPDNRQADELLTSMQ 437
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Match: SMESG000043092.1 (SMESG000043092.1) HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0 Identity = 424/426 (99.53%), Postives = 425/426 (99.77%), Query Frame = 2 Query: 101 MMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQXXXXXXXXXXXXXXXXXXXVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKXXXXXXXXXXXXXXXXXAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFXXXXXXXXXXXXXXXXXXXDNRQADELLTSMQ 1378 MMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYI+VGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQ AGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRPSRGRGRGRGNGRPDNRQADELLTSMQ Sbjct: 1 MMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIDVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQAAGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRPSRGRGRGRGNGRPDNRQADELLTSMQ 426
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Match: SMESG000043092.1 (SMESG000043092.1) HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0 Identity = 423/425 (99.53%), Postives = 424/425 (99.76%), Query Frame = 2 Query: 104 MSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQXXXXXXXXXXXXXXXXXXXVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKXXXXXXXXXXXXXXXXXAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFXXXXXXXXXXXXXXXXXXXDNRQADELLTSMQ 1378 MSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYI+VGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQ AGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRPSRGRGRGRGNGRPDNRQADELLTSMQ Sbjct: 1 MSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIDVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQAAGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRPSRGRGRGRGNGRPDNRQADELLTSMQ 425
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Match: SMESG000043092.1 (SMESG000043092.1) HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0 Identity = 412/429 (96.04%), Postives = 413/429 (96.27%), Query Frame = 2 Query: 101 MMSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQXXXXXXXXXXXXXXXXXXXVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKXXXXXXXXXXXXXXXXXAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFXXXXXXXXXXXXXXXXXXX---DNRQADELLTSMQ 1378 MMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYI+VGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQ AGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSR SR DNRQADELLTSMQ Sbjct: 1 MMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIDVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQAAGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRYSRPSRGRGRGRGNGRPDNRQADELLTSMQ 429
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Match: SMESG000043092.1 (SMESG000043092.1) HSP 1 Score: 703.36 bits (1814), Expect = 0.000e+0 Identity = 411/428 (96.03%), Postives = 412/428 (96.26%), Query Frame = 2 Query: 104 MSNALDAQEIALERLKNVLIIFEXXXXXXXXXXXXXXEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIEVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQXXXXXXXXXXXXXXXXXXXVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKXXXXXXXXXXXXXXXXXAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFXXXXXXXXXXXXXXXXXXX---DNRQADELLTSMQ 1378 MSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYI+VGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQ AGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSR SR DNRQADELLTSMQ Sbjct: 1 MSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKKNDLNEDQQMAVSKYQEVVSNLELVDELNTLALQQIKDAEKTLKKVKKQERLENKRHEASLIEFVMKTYYLLERIFDHQKVQSKLLSENYIDVGELDILKELFCEIHISEKGNWKKCSEQLQSLFEGGNKPLDLGTSKEHALKSISKDELMRCIEKISIVDWLASNDWKDNLNKEVEHEVQAAGDEDNEEENACEDIIEIVEPQQLSPKEMEAPVEKHSAQPENPKLSFVFLHESLVQEDGFSKNTENGYDSTGYNDEHVPRSNSQLSGKSTGNSNPNNTWNTETENAVDDVFSSATQSEFMHSENSRNLKTRGQRQPTNGRFRGRGAPQAAFPSRDAPSENYWTKTNRGTFNSNSRYSRPSRGRGRGRGNGRPDNRQADELLTSMQ 428 The following BLAST results are available for this feature:
BLAST of Cell cycle associated protein 1a vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Cell cycle associated protein 1a vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Cell cycle associated protein 1a vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Cell cycle associated protein 1a vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Cell cycle associated protein 1a vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Cell cycle associated protein 1a vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Cell cycle associated protein 1a vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 4
BLAST of Cell cycle associated protein 1a vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Cell cycle associated protein 1a vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of Cell cycle associated protein 1a vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Cell cycle associated protein 1a vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Cell cycle associated protein 1a vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Cell cycle associated protein 1a vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Cell cycle associated protein 1a vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023258 ID=SMED30023258|Name=Cell cycle associated protein 1a|organism=Schmidtea mediterranea sexual|type=transcript|length=1587bpback to top protein sequence of SMED30023258-orf-1 >SMED30023258-orf-1 ID=SMED30023258-orf-1|Name=SMED30023258-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=435bp MNCVNNCLMMSNALDAQEIALERLKNVLIIFEKKKRNLDKRKNKLDEYKKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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