nuclear factor Y complex C
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023249 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of nuclear factor Y complex C vs. Ensembl Human
Match: NFYC (nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]) HSP 1 Score: 149.443 bits (376), Expect = 7.167e-43 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPM 510 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K R+ + +P+ Sbjct: 19 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDELKPPKRQEVRQSVTPAEPV 141
BLAST of nuclear factor Y complex C vs. Ensembl Human
Match: NFYC (nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]) HSP 1 Score: 151.754 bits (382), Expect = 7.718e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKP----PKRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Human
Match: NFYC (nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]) HSP 1 Score: 152.91 bits (385), Expect = 8.317e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Human
Match: NFYC (nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]) HSP 1 Score: 152.91 bits (385), Expect = 8.317e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Human
Match: NFYC (nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]) HSP 1 Score: 152.91 bits (385), Expect = 8.317e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Celegans
Match: nfyc-1 (Nuclear transcription factor Y subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A0K3AWV9]) HSP 1 Score: 105.145 bits (261), Expect = 3.740e-26 Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 130 NFWETAKLEISQIKTDQITFKSQDL--PLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVP 444 +FW K ++++I + + KS+++ P+AR+KKIM++D+DV+ MI+++API A+AAEFFI E+T W + +RR LQ++DI AV +DQFDFLID +P Sbjct: 49 DFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQAAEFFIEEMTAMGWQYVSEARRRILQKADIASAV--QKSDQFDFLIDFLP 153
BLAST of nuclear factor Y complex C vs. Ensembl Celegans
Match: nfyc-1 (Nuclear transcription factor Y subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A0K3AWV9]) HSP 1 Score: 105.916 bits (263), Expect = 4.708e-26 Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 130 NFWETAKLEISQIKTDQITFKSQDL--PLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVP 444 +FW K ++++I + + KS+++ P+AR+KKIM++D+DV+ MI+++API A+AAEFFI E+T W + +RR LQ++DI AV +DQFDFLID +P Sbjct: 84 DFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQAAEFFIEEMTAMGWQYVSEARRRILQKADIASAV--QKSDQFDFLIDFLP 188
BLAST of nuclear factor Y complex C vs. Ensembl Celegans
Match: nfyc-1 (Nuclear transcription factor Y subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A0K3AWV9]) HSP 1 Score: 105.916 bits (263), Expect = 4.708e-26 Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 130 NFWETAKLEISQIKTDQITFKSQDL--PLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVP 444 +FW K ++++I + + KS+++ P+AR+KKIM++D+DV+ MI+++API A+AAEFFI E+T W + +RR LQ++DI AV +DQFDFLID +P Sbjct: 84 DFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQAAEFFIEEMTAMGWQYVSEARRRILQKADIASAV--QKSDQFDFLIDFLP 188
BLAST of nuclear factor Y complex C vs. Ensembl Celegans
Match: pole-4 (pep chromosome:WBcel235:II:14968633:14969354:-1 gene:WBGene00013150.1 transcript:Y53F4B.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pole-4) HSP 1 Score: 50.0618 bits (118), Expect = 4.653e-7 Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLID 435 LPL R+KK+++++ DV+ M++ EA L AKAAE FI+E++ A + KR+T+Q DI A+ T F FL D Sbjct: 36 LPLGRVKKVVRMNPDVE--MLNNEALQLMAKAAELFIKELSNAANQNAALEKRKTVQTKDIDKAI--KKTWAFAFLED 109
BLAST of nuclear factor Y complex C vs. Ensembl Fly
Match: Nf-YC (gene:FBgn0029905 transcript:FBtr0070974) HSP 1 Score: 144.821 bits (364), Expect = 2.052e-37 Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIK 459 ++NFW E+ I Q+ K Q LPLARIKKIMKLDE+ K MI+ EAP+LFAKA E+FI+E+T+ AW+HTE ++RRTLQRSDI A+A + DQFDFLIDIVPR+EIK Sbjct: 130 IDNFWPNIVSEVHSI--GQVDAKHQVLPLARIKKIMKLDENAK--MIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIA--NYDQFDFLIDIVPREEIK 235
BLAST of nuclear factor Y complex C vs. Ensembl Fly
Match: Mes4 (gene:FBgn0034726 transcript:FBtr0071827) HSP 1 Score: 59.6918 bits (143), Expect = 2.215e-10 Identity = 28/70 (40.00%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDT 411 LPLARI+ IMKLD D+ M + EA + AKA E FI ++ ++ +T ++K++T+Q+ D+ +A++ D+ Sbjct: 78 LPLARIRNIMKLDPDLH--MANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDS 145
BLAST of nuclear factor Y complex C vs. Ensembl Fly
Match: Mes4 (gene:FBgn0034726 transcript:FBtr0301243) HSP 1 Score: 59.6918 bits (143), Expect = 2.215e-10 Identity = 28/70 (40.00%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDT 411 LPLARI+ IMKLD D+ M + EA + AKA E FI ++ ++ +T ++K++T+Q+ D+ +A++ D+ Sbjct: 78 LPLARIRNIMKLDPDLH--MANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDS 145
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Match: nfyc (nuclear transcription factor Y, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-2165]) HSP 1 Score: 154.836 bits (390), Expect = 1.455e-42 Identity = 78/122 (63.93%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + D F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVD---FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 127
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Match: nfyc (nuclear transcription factor Y, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-2165]) HSP 1 Score: 150.984 bits (380), Expect = 2.164e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Match: nfyc (nuclear transcription factor Y, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-2165]) HSP 1 Score: 151.754 bits (382), Expect = 2.288e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Match: nfyc (nuclear transcription factor Y, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-2165]) HSP 1 Score: 151.754 bits (382), Expect = 2.288e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Match: nfyc (nuclear transcription factor Y, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-2165]) HSP 1 Score: 151.754 bits (382), Expect = 2.288e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Match: inpp5j (inositol polyphosphate-5-phosphatase J [Source:Xenbase;Acc:XB-GENE-984978]) HSP 1 Score: 154.836 bits (390), Expect = 1.622e-42 Identity = 79/122 (64.75%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ QDLPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 18 LQSFWPRVMEEIRNLTVK--DFRVQDLPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 129
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Match: inpp5j (inositol polyphosphate-5-phosphatase J [Source:Xenbase;Acc:XB-GENE-984978]) HSP 1 Score: 154.836 bits (390), Expect = 1.991e-42 Identity = 79/122 (64.75%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ QDLPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 18 LQSFWPRVMEEIRNLTVK--DFRVQDLPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 129
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Match: inpp5j (inositol polyphosphate-5-phosphatase J [Source:Xenbase;Acc:XB-GENE-984978]) HSP 1 Score: 149.828 bits (377), Expect = 9.467e-41 Identity = 74/101 (73.27%), Postives = 83/101 (82.18%), Query Frame = 1 Query: 187 FKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 F+ QDLPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 42 FRVQDLPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKP----PKRQE 134
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Match: pole4 (polymerase (DNA-directed), epsilon 4, accessory subunit [Source:NCBI gene;Acc:549359]) HSP 1 Score: 56.9954 bits (136), Expect = 1.195e-9 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFL 429 LPL+RIK +MK D D+ + S E+ + +KA E FI I A+++ ++ KR+TLQR D+ A+ D+F FL Sbjct: 37 LPLSRIKALMKADPDLS--LASQESVFVISKATELFIETIAKDAYLYAQQGKRKTLQRKDLDNAI--DAIDEFAFL 108
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Match: pole4 (polymerase (DNA-directed), epsilon 4, accessory subunit [Source:NCBI gene;Acc:549359]) HSP 1 Score: 56.9954 bits (136), Expect = 1.429e-9 Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDF----LIDIVPRD 450 LPL+RIK +MK D D+ + S E+ + +KA E FI I A+++ ++ KR+TLQR D+ + +A+ +F LI P D Sbjct: 37 LPLSRIKALMKADPDLS--LASQESVFVISKATELFIETIAKDAYLYAQQGKRKTLQRKDLGMYIAEDPFSLCEFCGHSLIAPPPDD 121
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Match: Nfyc (nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]) HSP 1 Score: 152.525 bits (384), Expect = 6.138e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Match: Nfyc (nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]) HSP 1 Score: 152.525 bits (384), Expect = 6.138e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Match: Nfyc (nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]) HSP 1 Score: 152.525 bits (384), Expect = 6.138e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Match: Nfyc (nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]) HSP 1 Score: 152.525 bits (384), Expect = 6.138e-42 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Match: Nfyc (nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]) HSP 1 Score: 63.5438 bits (153), Expect = 3.908e-12 Identity = 46/122 (37.70%), Postives = 55/122 (45.08%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK R+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK----------------------------------------RNDIAMAIT--KFDQFDFLIDIVPRDELK----PPKRQE 92
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Match: sp|Q5E9X1|NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus OX=9913 GN=NFYC PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.832e-41 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Match: sp|Q5RA23|NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii OX=9601 GN=NFYC PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.120e-41 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Match: sp|Q62725|NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus OX=10116 GN=Nfyc PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.294e-41 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Match: sp|P70353|NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus OX=10090 GN=Nfyc PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 4.294e-41 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVK--DFRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELKPP----KRQE 130
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Match: sp|Q13952|NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens OX=9606 GN=NFYC PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 1.522e-40 Identity = 78/122 (63.93%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRDE+K KR+E Sbjct: 19 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAIT--KFDQFDFLIDIVPRDELK----PPKRQE 130
BLAST of nuclear factor Y complex C vs. TrEMBL
Match: A0A182BAE6 (Nuclear factor-Y subunit C OS=Schmidtea mediterranea OX=79327 GN=NF-YC PE=2 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1 Query: 88 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNXXXXXXXXXXXXXXXVLNGQQQSHIFAIGGNQTNQQTAXXXXXXXXXXXXXXXXXXXXXXXSLDPQQXXXXXXXXXXXXXXDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 1125 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI Sbjct: 1 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 346
BLAST of nuclear factor Y complex C vs. TrEMBL
Match: A0A0F7GWV4 (Nuclear factor Y complex C (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 2.773e-148 Identity = 277/278 (99.64%), Postives = 277/278 (99.64%), Query Frame = 1 Query: 292 KAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNXXXXXXXXXXXXXXXVLNGQQQSHIFAIGGNQTNQQTAXXXXXXXXXXXXXXXXXXXXXXXSLDPQQXXXXXXXXXXXXXXDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 1125 KAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTT GDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI Sbjct: 11 KAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTXGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 288
BLAST of nuclear factor Y complex C vs. TrEMBL
Match: A0A448XRZ0 (CBFD_NFYB_HMF domain-containing protein OS=Protopolystoma xenopodis OX=117903 GN=PXEA_LOCUS36933 PE=4 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.649e-63 Identity = 126/253 (49.80%), Postives = 155/253 (61.26%), Query Frame = 1 Query: 100 ENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGN------LNLFGGNTIQLNT-QALSSGQLGLVDSNGLSVGANIIQAQGNQS---------------NVQNQSH--------GAVQYVLQLPIGSNNSLSGGQTIQIQMLPQ 768 E +ES + +FWE AKLEI ++K D FK+QDLPLARIKKIMKLD+DVK MMISAEAPILFAKAAE FIRE+TLRAW+HTERN+RRTLQR+D+ +AV+D DTDQFDFLIDIVPR+E + H R TS Q +T V+ N N LNT Q L + + +NG+S A+ I S N H G +QYVLQLP S + + GQ+ Q+Q+LPQ Sbjct: 6 EPSESHAQTASFWELAKLEIDEMKQDHNAFKTQDLPLARIKKIMKLDDDVKAMMISAEAPILFAKAAELFIRELTLRAWLHTERNRRRTLQRNDVAMAVSDSDTDQFDFLIDIVPREEARGH-----RRSTSTQQSVTTVSPNNSAAAATATIINNVPSLNTGQKLDYKTVTIPATNGVSATADGIVVSPTPSATAAAMQQSAAAVIGQANNPLHSAAGTIATGPIQYVLQLP-ASAAAAAPGQSFQLQVLPQ 252
BLAST of nuclear factor Y complex C vs. TrEMBL
Match: A0A0R3WMJ4 (CBFD_NFYB_HMF domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS1969 PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.063e-63 Identity = 119/240 (49.58%), Postives = 153/240 (63.75%), Query Frame = 1 Query: 103 NTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLF-------------GGNTIQLNTQALSSGQLGLVD-SNG----LSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQ 768 + +S + NFWE AK E +K +Q +FK+QDLPLARIKKIMKLD+DVKTMMISAEAPILFAKAAE FIRE+TLRAW+HT+RN+RRTLQR+DI++AV+ GDTDQFDFLIDIVPRDE + H +R + H Q Q +L GG+ + + T+ LV ++G ++ G +Q + S +QYV+QLP + +S S GQ QIQMLPQ Sbjct: 8 SCDSQTHIANFWEMAKQEAEGLKPEQNSFKTQDLPLARIKKIMKLDDDVKTMMISAEAPILFAKAAELFIRELTLRAWLHTDRNRRRTLQRNDISMAVSYGDTDQFDFLIDIVPRDEGRGH----RRSQQQHTQSALQHMAGSSLVQQTQVQVVQQQQAGGDDVSIKTETAGPTTATLVAGADGTLTTVAAGQPTVQFATVPAAAATTSGQQIQYVIQLP--ATSSASNGQPFQIQMLPQ 241
BLAST of nuclear factor Y complex C vs. TrEMBL
Match: A0A564YCS7 (CBFD_NFYB_HMF domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS5184 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.351e-62 Identity = 120/251 (47.81%), Postives = 154/251 (61.35%), Query Frame = 1 Query: 82 FKMDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNL------------FGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQ----------NQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQ 768 F D+ N+++ + +FWE AK E +K +Q +FK+QDLPLARIKKIMKLD+DVK MMISAEAPILFAKAAE FIRE+TLRAW+HT+RN+RRTLQR+DI++AV+ GDTDQFDFLIDIVPR+E ++H +R + H Q Q +L GG + + ++A LV + + G Q VQ N S +QYV+QLP S + S GQ QIQMLPQ Sbjct: 3 FATDL--NSDAAAHIADFWEKAKQEAECLKPEQNSFKTQDLPLARIKKIMKLDDDVKNMMISAEAPILFAKAAELFIRELTLRAWLHTDRNRRRTLQRNDISMAVSLGDTDQFDFLIDIVPREEGRAH----RRSQQQHTQSALQQMAGSSLVQQAQVHVVQQHAGGEDVSIKSEAAGQATATLV----ANADGTLTTVTGGQPTVQFTTVPTATATNVSGQQIQYVIQLP-ASAATASNGQPFQIQMLPQ 242
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Match: nfyc (nuclear transcription factor Y subunit gamma [Source:NCBI gene;Acc:103023800]) HSP 1 Score: 151.369 bits (381), Expect = 2.355e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTVKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Match: nfyc (nuclear transcription factor Y subunit gamma [Source:NCBI gene;Acc:103023800]) HSP 1 Score: 114.39 bits (285), Expect = 2.857e-28 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 232 KLDEDVK--TMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 ++ E+++ T+MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 23 RVMEEIRNLTVMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 104
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Match: pole4 (DNA polymerase epsilon 4, accessory subunit [Source:NCBI gene;Acc:103045108]) HSP 1 Score: 56.9954 bits (136), Expect = 4.367e-9 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDI----VPR 447 LPL+RIK +MK D D+ + S E+ + AKA E F+ I A ++ ++ KR+TLQR D+ A+ D+F FL I +PR Sbjct: 64 LPLSRIKALMKADPDLS--LASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDLDNAIE--AIDEFAFLEGIFLQPIPR 145
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Match: pole4 (DNA polymerase epsilon 4, accessory subunit [Source:NCBI gene;Acc:103045108]) HSP 1 Score: 55.0694 bits (131), Expect = 5.962e-9 Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFL 429 LPL+RIK +MK D D+ + S E+ + AKA E F+ I A ++ ++ KR+TLQR D+ A+ D+F FL Sbjct: 64 LPLSRIKALMKADPDLS--LASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDLDNAIE--AIDEFAFL 135
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Match: chrac1 (chromatin accessibility complex subunit 1 [Source:NCBI gene;Acc:103031563]) HSP 1 Score: 50.0618 bits (118), Expect = 2.075e-7 Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 190 KSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPR 447 K+ LP++R+K IMK DV I+ +A L KA E F++ + L ++ + + TL SD LA +T+ F FL DI+P+ Sbjct: 17 KTISLPVSRVKLIMKSSPDVSC--INQDALFLTTKATELFVQHLALSSYNNGSGKETNTLSYSD--LANTAEETETFQFLTDILPK 98
BLAST of nuclear factor Y complex C vs. Ensembl Sea Lamprey
Match: drap1 (DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]) HSP 1 Score: 48.521 bits (114), Expect = 8.595e-7 Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIV 441 P ARIKKIM+ DE+V ++A P++ ++A E F+ + +A T+ +T+ S + + QFDFL D+V Sbjct: 12 FPPARIKKIMQTDEEVGK--VAAAVPVIISRALELFLESLLTKACQVTQSRNAKTMTTSHLKQCIE--AEQQFDFLKDLV 87
BLAST of nuclear factor Y complex C vs. Ensembl Yeast
Match: HAP5 (Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex [Source:SGD;Acc:S000005885]) HSP 1 Score: 122.094 bits (305), Expect = 1.536e-32 Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 178 QITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPR 447 Q FKS LP ARI+K+MK DEDVK MISAEAPI+FAKA E FI E+T+RAW ERNKRRTLQ++DI A+ +D FDFLID+VPR Sbjct: 152 QDDFKSHSLPFARIRKVMKTDEDVK--MISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQ--KSDMFDFLIDVVPR 237
BLAST of nuclear factor Y complex C vs. Ensembl Nematostella
Match: EDO41226 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4W7]) HSP 1 Score: 50.447 bits (119), Expect = 3.449e-8 Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIV 441 P ARIKKIM+ DEDV ++A P++ +KA E F++ + +A +T+ +TL + + + QFDFL D+V Sbjct: 12 FPPARIKKIMQTDEDVGK--VAAAVPVIISKALEIFMQTLVEKACNYTQARNAKTLSTAHLKRCIT--SEQQFDFLKDLV 87
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Match: nfyc (nuclear transcription factor Y subunit gamma [Source:NCBI gene;Acc:101158212]) HSP 1 Score: 150.599 bits (379), Expect = 4.022e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTLKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Match: nfyc (nuclear transcription factor Y subunit gamma [Source:NCBI gene;Acc:101158212]) HSP 1 Score: 149.828 bits (377), Expect = 5.029e-41 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 124 LNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 L +FW EI + F+ Q+LPLARIKKIMKLDEDVK MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 17 LQSFWPRVMEEIRNLTLKD--FRVQELPLARIKKIMKLDEDVK--MISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 128
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Match: nfyc (nuclear transcription factor Y subunit gamma [Source:NCBI gene;Acc:101158212]) HSP 1 Score: 114.775 bits (286), Expect = 2.008e-28 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 232 KLDEDVK--TMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREE 489 ++ E+++ T+MISAEAP+LFAKAA+ FI E+TLRAWIHTE NKRRTLQR+DI +A+ DQFDFLIDIVPRD++K KR+E Sbjct: 23 RVMEEIRNLTLMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKF--DQFDFLIDIVPRDDLKPP----KRQE 104
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Match: pole4 (DNA polymerase epsilon 4, accessory subunit [Source:NCBI gene;Acc:101162035]) HSP 1 Score: 58.9214 bits (141), Expect = 2.137e-10 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFL 429 LPLARIK +MK D DV + S E+ + AKA E F+ I A ++ ++ KR+TLQR D+ A+ D+F FL Sbjct: 48 LPLARIKALMKTDPDVS--LASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDLDNAIE--AVDEFAFL 119
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Match: drap1 (DR1 associated protein 1 [Source:NCBI gene;Acc:101159386]) HSP 1 Score: 48.1358 bits (113), Expect = 3.962e-6 Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 202 LPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIV 441 P ARIKKIM+ DE++ ++A P++ ++A E F+ + +A T+ +T+ S + + QFDFL D+V Sbjct: 12 FPPARIKKIMQTDEEIGK--VAAAVPVIISRALELFLESLLTKACQVTQSRNAKTMTMSHLKQCIE--LEQQFDFLKDLV 87
BLAST of nuclear factor Y complex C vs. Planmine SMEST
Match: SMESG000077821.1 (SMESG000077821.1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1 Query: 88 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNXXXXXXXXXXXXXXXVLNGQQQSHIFAIGGNQTNQQTAXXXXXXXXXXXXXXXXXXXXXXXSLDPQQXXXXXXXXXXXXXXDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 1125 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI Sbjct: 1 MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 346
BLAST of nuclear factor Y complex C vs. Planmine SMEST
Match: SMESG000077821.1 (SMESG000077821.1) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1 Query: 94 MFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNXXXXXXXXXXXXXXXVLNGQQQSHIFAIGGNQTNQQTAXXXXXXXXXXXXXXXXXXXXXXXSLDPQQXXXXXXXXXXXXXXDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 1125 MFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI Sbjct: 1 MFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLDEDVKTMMISAEAPILFAKAAEFFIREITLRAWIHTERNKRRTLQRSDITLAVADGDTDQFDFLIDIVPRDEIKSHGSATKREETSHNQPMTQVTGNLNLFGGNTIQLNTQALSSGQLGLVDSNGLSVGANIIQAQGNQSNVQNQSHGAVQYVLQLPIGSNNSLSGGQTIQIQMLPQSMISNSSDNQTATTMTTSSTVLNGQQQSHIFAIGGNQTNQQTATVVLQPGLLTGTTGTSIYSTTPLSLDPQQTSIATVATTASVTTDGDQNTGGSGGHFVLTSIKRDTEETGSLNQEQI 344 The following BLAST results are available for this feature:
BLAST of nuclear factor Y complex C vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of nuclear factor Y complex C vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of nuclear factor Y complex C vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of nuclear factor Y complex C vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of nuclear factor Y complex C vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of nuclear factor Y complex C vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of nuclear factor Y complex C vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of nuclear factor Y complex C vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of nuclear factor Y complex C vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023249 ID=SMED30023249|Name=nuclear factor Y complex C|organism=Schmidtea mediterranea sexual|type=transcript|length=1363bpback to top protein sequence of SMED30023249-orf-1 >SMED30023249-orf-1 ID=SMED30023249-orf-1|Name=SMED30023249-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=347bp MDMFENTESINKLNNFWETAKLEISQIKTDQITFKSQDLPLARIKKIMKLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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