SMED30023104
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023104 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 198Note: Hover over icons to view figure legend
Homology
BLAST of SMED30023104 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 1.639e-11 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324 HSP 2 Score: 44.669 bits (104), Expect = 8.040e-6 Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 NV+ E+ P+H A+R GH+++ K LL+ K ++ K K+ ++PL A + + VKLL Sbjct: 434 NVKVET-----PLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 489
BLAST of SMED30023104 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 1.639e-11 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324 HSP 2 Score: 44.669 bits (104), Expect = 8.040e-6 Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 NV+ E+ P+H A+R GH+++ K LL+ K ++ K K+ ++PL A + + VKLL Sbjct: 434 NVKVET-----PLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 489
BLAST of SMED30023104 vs. Ensembl Human
Match: ANK1 (ankyrin 1 [Source:HGNC Symbol;Acc:HGNC:492]) HSP 1 Score: 60.8474 bits (146), Expect = 1.640e-11 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 357 HSP 2 Score: 44.669 bits (104), Expect = 8.042e-6 Identity = 22/61 (36.07%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 NV+ E+ P+H A+R GH+++ K LL+ K ++ K K+ ++PL A + + VKLL Sbjct: 467 NVKVET-----PLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 522
BLAST of SMED30023104 vs. Ensembl Human
Match: ANK3 (ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]) HSP 1 Score: 55.0694 bits (131), Expect = 1.790e-9 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 284 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 347
BLAST of SMED30023104 vs. Ensembl Human
Match: ANK3 (ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]) HSP 1 Score: 55.0694 bits (131), Expect = 1.808e-9 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 273 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 336
BLAST of SMED30023104 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 3.691e-7 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30023104 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 3.691e-7 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30023104 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 3.692e-7 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30023104 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 3.692e-7 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30023104 vs. Ensembl Celegans
Match: unc-44 (AO49 ankyrin [Source:UniProtKB/TrEMBL;Acc:Q7JP86]) HSP 1 Score: 47.3654 bits (111), Expect = 3.694e-7 Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++ LL+ + I K KNG +PL +A Q + D + L Sbjct: 282 RGAIIDSRTKDLLTPLHCAARSGHDQVVDLLVVQGAPISAKTKNGLAPLHMAAQGDHVDAARTL 345
BLAST of SMED30023104 vs. Ensembl Fly
Match: TrpA1 (gene:FBgn0035934 transcript:FBtr0331827) HSP 1 Score: 53.1434 bits (126), Expect = 4.570e-9 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCE 270 P+HYASR+GH L+ L+R I KN N +SPL A + R++ V+ L + EK II D + L IS + Sbjct: 482 PLHYASRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQ 557
BLAST of SMED30023104 vs. Ensembl Fly
Match: TrpA1 (gene:FBgn0035934 transcript:FBtr0331826) HSP 1 Score: 53.1434 bits (126), Expect = 4.615e-9 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCE 270 P+HYASR+GH L+ L+R I KN N +SPL A + R++ V+ L + EK II D + L IS + Sbjct: 447 PLHYASRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQ 522
BLAST of SMED30023104 vs. Ensembl Fly
Match: TrpA1 (gene:FBgn0035934 transcript:FBtr0331825) HSP 1 Score: 52.7582 bits (125), Expect = 4.845e-9 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCE 270 P+HYASR+GH L+ L+R I KN N +SPL A + R++ V+ L + EK II D + L IS + Sbjct: 447 PLHYASRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQ 522
BLAST of SMED30023104 vs. Ensembl Fly
Match: TrpA1 (gene:FBgn0035934 transcript:FBtr0331824) HSP 1 Score: 52.7582 bits (125), Expect = 4.851e-9 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCE 270 P+HYASR+GH L+ L+R I KN N +SPL A + R++ V+ L + EK II D + L IS + Sbjct: 482 PLHYASRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQ 557
BLAST of SMED30023104 vs. Ensembl Fly
Match: TrpA1 (gene:FBgn0035934 transcript:FBtr0331823) HSP 1 Score: 52.7582 bits (125), Expect = 5.143e-9 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCE 270 P+HYASR+GH L+ L+R I KN N +SPL A + R++ V+ L + EK II D + L IS + Sbjct: 482 PLHYASRDGHIRSLENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQ 557
BLAST of SMED30023104 vs. Ensembl Zebrafish
Match: ank1a (ankyrin 1, erythrocytic a [Source:ZFIN;Acc:ZDB-GENE-041010-44]) HSP 1 Score: 58.9214 bits (141), Expect = 4.619e-11 Identity = 24/64 (37.50%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL + I K KNG SP+ +A Q + DC++ L Sbjct: 261 RGAKIDAKTKDELTPLHCAARNGHVRIIEILLDQGAPIQAKTKNGLSPIHMAAQGDHLDCIRQL 324 HSP 2 Score: 44.2838 bits (103), Expect = 7.334e-6 Identity = 20/64 (31.25%), Postives = 35/64 (54.69%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + NV C+++ P+H A++ GH+DI+ LLL+ + NG S L +AK+ + +L Sbjct: 723 QQANVNCKTRMSYTPLHQAAQQGHTDIVTLLLKHGAQPNEVTSNGTSALAIAKRLGYISVIDVL 786
BLAST of SMED30023104 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 1.570e-10 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 202 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 265
BLAST of SMED30023104 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 1.578e-10 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 294 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 357
BLAST of SMED30023104 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 1.595e-10 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 264 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 327
BLAST of SMED30023104 vs. Ensembl Zebrafish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 57.3806 bits (137), Expect = 1.595e-10 Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH ++++LL + + K KNG SP+ +A Q + DCV+ L Sbjct: 272 RGAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQL 335
BLAST of SMED30023104 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.9954 bits (136), Expect = 3.728e-10 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 247 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 310
BLAST of SMED30023104 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.9954 bits (136), Expect = 3.728e-10 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 252 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 315
BLAST of SMED30023104 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.9954 bits (136), Expect = 3.735e-10 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 219 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 282
BLAST of SMED30023104 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.9954 bits (136), Expect = 3.736e-10 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 257 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 320
BLAST of SMED30023104 vs. Ensembl Xenopus
Match: ANK1 (ankyrin 1 [Source:NCBI gene;Acc:613080]) HSP 1 Score: 56.9954 bits (136), Expect = 3.736e-10 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIDACTKDELTPLHCAVRNGHVRISEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 357
BLAST of SMED30023104 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 1.414e-11 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30023104 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 1.485e-11 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30023104 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 1.517e-11 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 294 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 357
BLAST of SMED30023104 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 1.520e-11 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30023104 vs. Ensembl Mouse
Match: Ank1 (ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]) HSP 1 Score: 60.4622 bits (145), Expect = 1.520e-11 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 265 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 328
BLAST of SMED30023104 vs. UniProt/SwissProt
Match: sp|P16157|ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens OX=9606 GN=ANK1 PE=1 SV=3) HSP 1 Score: 60.8474 bits (146), Expect = 7.871e-11 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 261 RGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 324
BLAST of SMED30023104 vs. UniProt/SwissProt
Match: sp|Q02357|ANK1_MOUSE (Ankyrin-1 OS=Mus musculus OX=10090 GN=Ank1 PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 1.064e-10 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 257 RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 320
BLAST of SMED30023104 vs. UniProt/SwissProt
Match: sp|G5E8K5|ANK3_MOUSE (Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 7.158e-9 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 273 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGLSPLHMATQGDHLNCVQLL 336
BLAST of SMED30023104 vs. UniProt/SwissProt
Match: sp|Q8C8R3|ANK2_MOUSE (Ankyrin-2 OS=Mus musculus OX=10090 GN=Ank2 PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 7.926e-9 Identity = 23/64 (35.94%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH +++LLL K + + KNG SPL +A Q + +CVK L Sbjct: 288 RGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHVECVKHL 351
BLAST of SMED30023104 vs. UniProt/SwissProt
Match: sp|O70511|ANK3_RAT (Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3) HSP 1 Score: 55.0694 bits (131), Expect = 8.673e-9 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 298 RGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQGDHLNCVQLL 361
BLAST of SMED30023104 vs. TrEMBL
Match: A0A059LBQ3 (ANK_REP_REGION domain-containing protein (Fragment) OS=Helicosporidium sp. ATCC 50920 OX=1291522 GN=H632_c4503p0 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.385e-10 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 R C+ KSK+ P HYA+ +GH ++L+LL + + ++ G+SPL LA + DCV+ L N Sbjct: 7 RGAETSCQDKSKLTPAHYAAAHGHEEVLRLLWSKGTDLDAESPGGQSPLHLAAAAGQADCVRFLVN 72
BLAST of SMED30023104 vs. TrEMBL
Match: A0A1A8HDW4 (Ankyrin 1, erythrocytic (Fragment) OS=Nothobranchius korthausae OX=1143690 GN=ANK1 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.268e-9 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCV+ L Sbjct: 95 RGAQIDAKTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 158
BLAST of SMED30023104 vs. TrEMBL
Match: V8NF47 (Ankyrin-1 OS=Ophiophagus hannah OX=8665 GN=ANK1 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.450e-9 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R N+E +K ++ P+H A+RNGH I ++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 218 RGANIEVRTKDELTPLHCAARNGHLRIAEILLDHGAPIQAKTKNGLSPIHMASQGDHLDCVRLL 281
BLAST of SMED30023104 vs. TrEMBL
Match: A0A4Z2J7F7 (Ankyrin-1 OS=Liparis tanakae OX=230148 GN=Ank1_0 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 5.113e-9 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A+RNGH+ I+++LL I K KNG SP+ +A Q + DCVK L Sbjct: 212 RGAQIDAVTKDELTPLHCAARNGHARIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVKQL 275
BLAST of SMED30023104 vs. TrEMBL
Match: M7B3Q0 (Ankyrin-1 OS=Chelonia mydas OX=8469 GN=UY3_11160 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 6.658e-9 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E +K ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCV+LL Sbjct: 197 RGAQIETRTKDELTPLHCAARNGHMRIMEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLL 260
BLAST of SMED30023104 vs. Ensembl Cavefish
Match: ank1a (ankyrin 1, erythrocytic a [Source:ZFIN;Acc:ZDB-GENE-041010-44]) HSP 1 Score: 59.3066 bits (142), Expect = 2.831e-11 Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL + I K KNG SP+ +A Q + DCV+ L Sbjct: 233 RGATIDAKTKDELTPLHCAARNGHVRIIEILLDQGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 296
BLAST of SMED30023104 vs. Ensembl Cavefish
Match: ank1b (ankyrin 1, erythrocytic b [Source:ZFIN;Acc:ZDB-GENE-091113-6]) HSP 1 Score: 58.5362 bits (140), Expect = 6.097e-11 Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K ++ P+H A+RNGH ++++LL + I K KNG SP+ +A Q + DCV+ L Sbjct: 236 RGAQIDARTKDELTPLHCAARNGHVRVIEILLDQGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 299 HSP 2 Score: 43.8986 bits (102), Expect = 7.026e-6 Identity = 23/68 (33.82%), Postives = 39/68 (57.35%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQ---CNRFDCVKLLT 195 + +V C+++ P+H A++ GH+DI+ LLL+ NG SPL +AK+ + D +KL+T Sbjct: 703 QQAHVNCKTRVGYTPLHQAAQQGHTDIVTLLLKHGALPNEITTNGTSPLGIAKRLGYISVIDVLKLVT 770
BLAST of SMED30023104 vs. Ensembl Cavefish
Match: ank3b (ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]) HSP 1 Score: 56.6102 bits (135), Expect = 2.749e-10 Identity = 24/68 (35.29%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNME 204 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL + E Sbjct: 237 RGARIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLLLHHE 304
BLAST of SMED30023104 vs. Ensembl Cavefish
Match: ank3a (ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]) HSP 1 Score: 55.8398 bits (133), Expect = 5.587e-10 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 292 RGAKIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 355 HSP 2 Score: 44.2838 bits (103), Expect = 5.840e-6 Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 1 Query: 25 SKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 ++ + P+H A++ G D++ LLL + + NKNG +PL LA Q +R ++L N Sbjct: 663 TRQGISPLHLAAQEGSVDLVSLLLTKNANVNMGNKNGLTPLHLAAQEDRVGVAEVLLN 720
BLAST of SMED30023104 vs. Ensembl Cavefish
Match: ank3a (ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]) HSP 1 Score: 55.8398 bits (133), Expect = 5.600e-10 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 264 RGAKIDAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 327 HSP 2 Score: 44.2838 bits (103), Expect = 5.854e-6 Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 1 Query: 25 SKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 ++ + P+H A++ G D++ LLL + + NKNG +PL LA Q +R ++L N Sbjct: 635 TRQGISPLHLAAQEGSVDLVSLLLTKNANVNMGNKNGLTPLHLAAQEDRVGVAEVLLN 692
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000095.1 (pep scaffold:Pmarinus_7.0:GL477582:20897:60453:1 gene:ENSPMAG00000000080.1 transcript:ENSPMAT00000000095.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.4546 bits (132), Expect = 1.301e-10 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++++LL I K KNG SPL +A Q CV+LL Sbjct: 260 RGAKIDTKTRDGLTPLHCAARSGHEKVIEMLLERDAPILAKTKNGLSPLHMATQGEHLACVQLL 323 HSP 2 Score: 43.5134 bits (101), Expect = 1.929e-6 Identity = 24/92 (26.09%), Postives = 45/92 (48.91%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDD--PIEIEKLFISCEFIR 279 ++ ++S + PIH AS GH ++++LLL+ N G++PL +A + + + VK L + R+D P+ I E ++ Sbjct: 395 SIHTTTESGLTPIHVASFMGHLNVVQLLLQNGASSNATNVRGETPLHMASRAGQLEVVKTLLQSGARVGVKAREDQTPLHIASRLGKAEIVQ 486
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000093.1 (pep scaffold:Pmarinus_7.0:GL477582:20502:66045:1 gene:ENSPMAG00000000080.1 transcript:ENSPMAT00000000093.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 55.4546 bits (132), Expect = 1.307e-10 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++++LL I K KNG SPL +A Q CV+LL Sbjct: 267 RGAKIDTKTRDGLTPLHCAARSGHEKVIEMLLERDAPILAKTKNGLSPLHMATQGEHLACVQLL 330 HSP 2 Score: 43.5134 bits (101), Expect = 1.938e-6 Identity = 24/92 (26.09%), Postives = 45/92 (48.91%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDD--PIEIEKLFISCEFIR 279 ++ ++S + PIH AS GH ++++LLL+ N G++PL +A + + + VK L + R+D P+ I E ++ Sbjct: 402 SIHTTTESGLTPIHVASFMGHLNVVQLLLQNGASSNATNVRGETPLHMASRAGQLEVVKTLLQSGARVGVKAREDQTPLHIASRLGKAEIVQ 493
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007446.1 (pep scaffold:Pmarinus_7.0:GL478728:200023:240674:1 gene:ENSPMAG00000006704.1 transcript:ENSPMAT00000007446.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.6026 bits (122), Expect = 3.141e-9 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 37 MRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + P+H A+R+GH ++++LL + I K KNG SPL +A Q + +CV++L Sbjct: 7 LTPLHCAARSGHEQVVEILLEQGAPILAKTKNGLSPLHMATQGDHVECVQVL 58
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003991.1 (pep scaffold:Pmarinus_7.0:GL484476:255315:281660:1 gene:ENSPMAG00000003623.1 transcript:ENSPMAT00000003991.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 1.211e-8 Identity = 25/79 (31.65%), Postives = 42/79 (53.16%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDP 237 + N+ K R IH+A+ GH++++K+L+ + CK+K G SPL A + VKLL ++ ++ DDP Sbjct: 160 KGANINAFDKKDRRAIHWAAYMGHTEVVKVLVAHGADVRCKDKKGYSPLHAASSSGQIGVVKLLLDLG-----VDIDDP 233
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Match: asap2a (ArfGAP with SH3 domain, ankyrin repeat and PH domain 2a [Source:ZFIN;Acc:ZDB-GENE-041210-256]) HSP 1 Score: 47.7506 bits (112), Expect = 7.292e-8 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 4 NC-NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEK 207 NC NV ++++ +H+ SR ++ LKLLLR K ++ N+ G++ LD+AKQ + C LLT EK Sbjct: 546 NCRNVNKQTENGNTALHFCSRYNATECLKLLLRSKAALHVSNEAGETALDIAKQMDHAQCEDLLTLAEK 614
BLAST of SMED30023104 vs. Ensembl Yeast
Match: PHO81 (Cyclin-dependent kinase (CDK) inhibitor; regulates Pho80p-Pho85p and Pcl7p-Pho85p cyclin-CDK complexes in response to phosphate levels; inhibitory activity for Pho80p-Pho85p requires myo-D-inositol heptakisphosphate (IP7) generated by Vip1p; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000003465]) HSP 1 Score: 44.669 bits (104), Expect = 5.902e-7 Identity = 21/59 (35.59%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 16 ECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 E + +K PI YA R+GHS+++ LL+ R+ ++ NG SPL A + D + L Sbjct: 586 EIDGFNKWTPIFYAVRSGHSEVITELLKHNARLDIEDDNGHSPLFYALWESHVDVLNAL 644
BLAST of SMED30023104 vs. Ensembl Nematostella
Match: EDO38657 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCC3]) HSP 1 Score: 45.8246 bits (107), Expect = 9.542e-8 Identity = 22/61 (36.07%), Postives = 34/61 (55.74%), Query Frame = 1 Query: 10 NVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 N++ +S S + +HYA+ G + L+LL+ + RI + G SPLD A + FDC L Sbjct: 20 NIDHQSASGLTALHYAALEGSFECLELLVNKGARIDILDSKGCSPLDFAVRGGNFDCAAYL 80
BLAST of SMED30023104 vs. Ensembl Nematostella
Match: EDO45485 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSW0]) HSP 1 Score: 43.1282 bits (100), Expect = 4.904e-7 Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 P+H A GH +I+KLLL E + + KNG PL LA Q +++L Sbjct: 4 PLHIAVVYGHWEIVKLLLDEGADVEAQTKNGYQPLHLAAQYGHKIIIEIL 53
BLAST of SMED30023104 vs. Ensembl Nematostella
Match: EDO49727 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RFI4]) HSP 1 Score: 43.8986 bits (102), Expect = 6.510e-7 Identity = 17/51 (33.33%), Postives = 30/51 (58.82%), Query Frame = 1 Query: 4 NCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLA 156 +V+ + P+H+A+ G+ DI++LLLR + N++G P+DLA Sbjct: 45 GADVDKTDRYGWAPLHHAAAEGYIDIVRLLLRANANVRALNQHGHMPMDLA 95
BLAST of SMED30023104 vs. Ensembl Nematostella
Match: EDO28510 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T695]) HSP 1 Score: 45.0542 bits (105), Expect = 1.082e-6 Identity = 18/52 (34.62%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 43 PIHYASRNGHSDILKLLLREKC--RIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 P+H+A + G +++ K+LLR I+ +N NGK+P+ LAK+ + ++L+ Sbjct: 132 PLHFAGQAGKTEVAKVLLRSGAAESIHIENSNGKTPVQLAKESGHSETLELV 183
BLAST of SMED30023104 vs. Ensembl Nematostella
Match: EDO26963 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAK8]) HSP 1 Score: 40.817 bits (94), Expect = 4.632e-6 Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 1 Query: 55 ASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 A+RNG S+ L+LL R+ + +NK+GK PL A +CV+ L Sbjct: 9 AARNGRSETLELLYRKGVDLEKRNKDGKRPLHEAASAGSLECVQFL 54
BLAST of SMED30023104 vs. Ensembl Medaka
Match: ank1b (ankyrin-1 [Source:NCBI gene;Acc:101157380]) HSP 1 Score: 59.6918 bits (143), Expect = 2.250e-11 Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ ++K ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCV+ L Sbjct: 259 RGAQIDAQTKDELTPLHCAARNGHVRIIEILLEHGAPIQAKTKNGLSPIHMAAQGDHMDCVRQL 322
BLAST of SMED30023104 vs. Ensembl Medaka
Match: ENSORLT00000040233.1 (pep primary_assembly:ASM223467v1:19:16412534:16434057:1 gene:ENSORLG00000021910.1 transcript:ENSORLT00000040233.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.9954 bits (136), Expect = 2.070e-10 Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +K + P+H A+R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 266 RGSKIDARTKDGLTPLHCAARSGHEQVVEMLLNRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 329 HSP 2 Score: 44.669 bits (104), Expect = 4.201e-6 Identity = 20/66 (30.30%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 R V+ ++++ + P+H AS+ G+S++++LLL +I + K+G +PL A + V++L N Sbjct: 233 RGAAVDFKARNDITPLHVASKRGNSNMVRLLLERGSKIDARTKDGLTPLHCAARSGHEQVVEMLLN 298
BLAST of SMED30023104 vs. Ensembl Medaka
Match: ENSORLT00000039903.1 (pep primary_assembly:ASM223467v1:15:18469388:18484014:-1 gene:ENSORLG00000030042.1 transcript:ENSORLT00000039903.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.6102 bits (135), Expect = 2.575e-10 Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R +E ++K + P+H +R+GH ++++LL I K KNG SPL +A Q + +CV+LL Sbjct: 266 RGARIEAKTKDGLTPLHCGARSGHEQVVEILLDRGAPILSKTKNGLSPLHMATQGDHLNCVQLL 329
BLAST of SMED30023104 vs. Ensembl Medaka
Match: ENSORLT00000006308.2 (pep primary_assembly:ASM223467v1:1:12516834:12530692:1 gene:ENSORLG00000005003.2 transcript:ENSORLT00000006308.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 54.6842 bits (130), Expect = 1.029e-9 Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 R ++ +++ + P+H A+R+GH ++LLL I + KNG SPL ++ Q + +CVKLL Sbjct: 236 RGAQIDAKTRDGLTPLHCAARSGHDPAVELLLERGAPILARTKNGLSPLHMSAQGDHIECVKLL 299
BLAST of SMED30023104 vs. Ensembl Medaka
Match: ank1a (ankyrin-1 [Source:NCBI gene;Acc:101174837]) HSP 1 Score: 53.5286 bits (127), Expect = 3.767e-9 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 1 Query: 25 SKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 + ++ P+H A+RNGH I+++LL I K KNG SP+ +A Q + DCVK L Sbjct: 207 ANDELTPLHCAARNGHFRIIEILLDNGAPIQAKTKNGLSPIHMAAQGDHMDCVKQL 262 HSP 2 Score: 46.9802 bits (110), Expect = 6.799e-7 Identity = 23/64 (35.94%), Postives = 35/64 (54.69%), Query Frame = 1 Query: 13 VECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNME 204 V+ ++K P+H A+R GH +++KLLL K G SPL +A + V+LL +ME Sbjct: 401 VDAKAKDDQTPLHCAARMGHKELVKLLLEHKANPNSTTTAGHSPLHIAAREGHVQTVRLLLDME 464
BLAST of SMED30023104 vs. Planmine SMEST
Match: SMESG000019970.1 (SMESG000019970.1) HSP 1 Score: 194.897 bits (494), Expect = 3.304e-59 Identity = 95/111 (85.59%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENICTGLNVLEMAMTSNA 333 RNCN ECESKSK RPIHYASR GHS+I+KL L+ K RI CKNK+GKSPLD+AKQ NR DCVKLLTNMEKLFAIIERD PIEIEKLFISCEFIRENI TGLNVLEMAMTSNA Sbjct: 59 RNCNTECESKSKWRPIHYASREGHSEIVKLFLQRKWRIDCKNKDGKSPLDIAKQFNRVDCVKLLTNMEKLFAIIERDAPIEIEKLFISCEFIRENIYTGLNVLEMAMTSNA 169
BLAST of SMED30023104 vs. Planmine SMEST
Match: SMESG000010347.1 (SMESG000010347.1) HSP 1 Score: 188.348 bits (477), Expect = 4.759e-59 Identity = 93/111 (83.78%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENICTGLNVLEMAMTSNA 333 RNCN+ECE KSK RPIH AS NGHS+ LKLLL+ KCRI KNK+GKSPLD+AKQ NR DCV+LLT+MEKLFAIIERDDPIEIEKLFISCEFIRENI TGLNVLEMAMTSNA Sbjct: 92 RNCNIECEDKSKWRPIHCASWNGHSETLKLLLQWKCRIDYKNKDGKSPLDIAKQYNRVDCVELLTHMEKLFAIIERDDPIEIEKLFISCEFIRENIYTGLNVLEMAMTSNA 202
BLAST of SMED30023104 vs. Planmine SMEST
Match: SMESG000019959.1 (SMESG000019959.1) HSP 1 Score: 190.66 bits (483), Expect = 1.720e-57 Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENICTGLNVLEMAMTSNA 333 RNCN ECE++S RPIHYASR GHS+I+KL L+ KCRI CKNK+GKSPLD AK+ NR DC+KLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENI TGLNVLEMAMTSNA Sbjct: 158 RNCNTECENESGNRPIHYASREGHSEIVKLFLQRKCRIDCKNKDGKSPLDFAKEYNRVDCMKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENIYTGLNVLEMAMTSNA 268 HSP 2 Score: 69.3218 bits (168), Expect = 6.740e-15 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN CE+KS RPIHYAS GHS+I+KLLL C C+N++G P+ A + VKLL Sbjct: 59 RNCNTICETKSGDRPIHYASWQGHSEIVKLLLDRNCNTECENESGNRPIHYASWQGHSEIVKLL 122
BLAST of SMED30023104 vs. Planmine SMEST
Match: SMESG000019761.1 (SMESG000019761.1) HSP 1 Score: 188.348 bits (477), Expect = 7.186e-57 Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENICTGLNVLEMAMTSNA 333 RNCN ECE+KSK RPIHYAS GHS+ILKLLLR KCRI CKNK+GKSPLD+AK+ N FDCV+LLTNMEKLFAIIERD+ IEIEKLFISC+FIRENI TGLNVL +AMTSNA Sbjct: 238 RNCNTECETKSKWRPIHYASWKGHSEILKLLLRRKCRIDCKNKDGKSPLDIAKEYNHFDCVELLTNMEKLFAIIERDEAIEIEKLFISCQFIRENIYTGLNVLAIAMTSNA 348 HSP 2 Score: 70.8626 bits (172), Expect = 2.078e-15 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN ECE K RPIH+ASR GHS+I+KLLL C C++K+G+ P+ A + VKLL Sbjct: 92 RNCNTECEDKLGWRPIHWASRQGHSEIVKLLLDRNCNTECEDKSGERPIHHASWRGHSEIVKLL 155 HSP 3 Score: 69.3218 bits (168), Expect = 7.793e-15 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN ECE+K MRPI+ ASR GHS+I+KLLL C C++K G P+ A + + VKLL Sbjct: 59 RNCNTECETKWGMRPIYLASRQGHSEIVKLLLDRNCNTECEDKLGWRPIHWASRQGHSEIVKLL 122 HSP 4 Score: 65.0846 bits (157), Expect = 2.061e-13 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 1 RNCNVECESKS--------------KMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 RNCN ECE+KS K RPIHYAS GHS+I+KLLL C I C++++G P+ A + +KLL N Sbjct: 158 RNCNTECETKSETDRFIMQAGEDKSKWRPIHYASWEGHSEIVKLLLDRNCNIECEDESGNRPIHHASWRGHSEILKLLLN 237 HSP 5 Score: 57.3806 bits (137), Expect = 1.026e-10 Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKN 132 RNCN ECE KS RPIH+AS GHS+I+KLLL C C+ K+ Sbjct: 125 RNCNTECEDKSGERPIHHASWRGHSEIVKLLLDRNCNTECETKS 168
BLAST of SMED30023104 vs. Planmine SMEST
Match: SMESG000019761.1 (SMESG000019761.1) HSP 1 Score: 187.963 bits (476), Expect = 9.331e-57 Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTNMEKLFAIIERDDPIEIEKLFISCEFIRENICTGLNVLEMAMTSNA 333 RNCN ECE+KSK RPIHYAS GHS+ILKLLLR KCRI CKNK+GKSPLD+AK+ N FDCV+LLTNMEKLFAIIERD+ IEIEKLFISC+FIRENI TGLNVL +AMTSNA Sbjct: 238 RNCNTECETKSKWRPIHYASWKGHSEILKLLLRRKCRIDCKNKDGKSPLDIAKEYNHFDCVELLTNMEKLFAIIERDEAIEIEKLFISCQFIRENIYTGLNVLAIAMTSNA 348 HSP 2 Score: 73.9442 bits (180), Expect = 1.778e-16 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLLTN 198 RNCN ECE KSK RPIHYAS GHS+I+KLLL C I C++++G P+ A + +KLL N Sbjct: 172 RNCNTECEDKSKWRPIHYASWEGHSEIVKLLLDRNCNIECEDESGNRPIHHASWRGHSEILKLLLN 237 HSP 3 Score: 68.9366 bits (167), Expect = 9.192e-15 Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN ECE+K MRPI+ ASR GHS+I+KLLL C C++K G P+ A + + VKLL Sbjct: 59 RNCNTECETKWGMRPIYLASRQGHSEIVKLLLDRNCNTECEDKLGWRPIHWASRQGHSEIVKLL 122 HSP 4 Score: 66.6254 bits (161), Expect = 6.611e-14 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 1 RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLA 156 RNCN ECE K RPIH+ASR GHS+I+KLLL C C++K+G+ P+ A Sbjct: 92 RNCNTECEDKLGWRPIHWASRQGHSEIVKLLLDRNCNTECEDKSGERPIHHA 143 HSP 5 Score: 58.9214 bits (141), Expect = 3.134e-11 Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 1 RNCNVECESKS--------------KMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDLAKQCNRFDCVKLL 192 RNCN ECE KS + RPIH+ASR GHS+I+KLLL C C++K+ P+ A + VKLL Sbjct: 125 RNCNTECEDKSGERPIHHASWRDQIRNRPIHHASRRGHSEIVKLLLDRNCNTECEDKSKWRPIHYASWEGHSEIVKLL 202 The following BLAST results are available for this feature:
BLAST of SMED30023104 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30023104 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30023104 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of SMED30023104 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SMED30023104 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30023104 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023104 ID=SMED30023104|Name=SMED30023104|organism=Schmidtea mediterranea sexual|type=transcript|length=334bpback to top protein sequence of SMED30023104-orf-1 >SMED30023104-orf-1 ID=SMED30023104-orf-1|Name=SMED30023104-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=111bp RNCNVECESKSKMRPIHYASRNGHSDILKLLLREKCRIYCKNKNGKSPLDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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