Placenta specific protein 8
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023073 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Placenta specific protein 8 vs. Ensembl Zebrafish
Match: ponzr5 (plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]) HSP 1 Score: 45.8246 bits (107), Expect = 3.796e-6 Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 336 CYTCYLFHIYDEFLCTPICMYDS-------VLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDT 542 C+ C + E LC P + D L +R R+R+GI+G+I +DC + +C C+ CQ+ R+M+ E + Sbjct: 44 CFACSTARKHGECLCLP--LLDGFGFIPAITLAMRVSVRSRYGIKGSICKDCAYSTFCGACSWCQISREMNIREQS 117
BLAST of Placenta specific protein 8 vs. Ensembl Zebrafish
Match: ponzr5 (plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]) HSP 1 Score: 45.4394 bits (106), Expect = 4.136e-6 Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 3 Query: 336 CYTCYLFHIYDEFLCTPICMYDS-------VLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDT 542 C+ C + E LC P + D L +R R+R+GI+G+I +DC + +C C+ CQ+ R+M+ E + Sbjct: 41 CFACSTARKHGECLCLP--LLDGFGFIPAITLAMRVSVRSRYGIKGSICKDCAYSTFCGACSWCQISREMNIREQS 114
BLAST of Placenta specific protein 8 vs. Ensembl Zebrafish
Match: plac8.2 (placenta associated 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]) HSP 1 Score: 44.2838 bits (103), Expect = 7.979e-6 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 3 Query: 231 IIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 + QP A GP+ + +G+ CC+D + CC +F C C + +E C+ + +R+ +R ++ I+G++ D C Y C CA CQLKRD++ Sbjct: 3 VTSQPAAFGPQEFQTGLMSCCEDMSICCCGLFCLPCMGCSIASDMNE-----CCLCGLGMPMRSVYRTKYNIQGSMCTDFCIVYNCMPCAACQLKRDIE 96
BLAST of Placenta specific protein 8 vs. Ensembl Zebrafish
Match: plac8.2 (placenta associated 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]) HSP 1 Score: 44.2838 bits (103), Expect = 7.979e-6 Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 3 Query: 231 IIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 + QP A GP+ + +G+ CC+D + CC +F C C + +E C+ + +R+ +R ++ I+G++ D C Y C CA CQLKRD++ Sbjct: 3 VTSQPAAFGPQEFQTGLMSCCEDMSICCCGLFCLPCMGCSIASDMNE-----CCLCGLGMPMRSVYRTKYNIQGSMCTDFCIVYNCMPCAACQLKRDIE 96
BLAST of Placenta specific protein 8 vs. Ensembl Xenopus
Match: ifi35 (interferon induced protein 35 [Source:Xenbase;Acc:XB-GENE-1010748]) HSP 1 Score: 51.2174 bits (121), Expect = 4.698e-8 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 324 FFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 FF C C + Y E C P+ M ++L LRT R R+ I+GTI DC +C CA+CQ+ R+++ Sbjct: 55 FFPMCVACKVAQDYGECCCLPL-MGGTILALRTGIRERYHIQGTICTDCLCVTFCGPCALCQMARELE 121
BLAST of Placenta specific protein 8 vs. Ensembl Xenopus
Match: ENSXETT00000008293.1 (novel protein similar to cornifelin [Source:NCBI gene;Acc:733751]) HSP 1 Score: 51.2174 bits (121), Expect = 4.798e-8 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 324 FFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 FF C C + Y E C P+ M ++L LRT R R+ I+GTI DC +C CA+CQ+ R+++ Sbjct: 47 FFPMCVACKVAQDYGECCCLPL-MGGTILALRTGIRERYHIQGTICTDCLCVTFCGPCALCQMARELE 113
BLAST of Placenta specific protein 8 vs. Ensembl Xenopus
Match: ifi35 (interferon induced protein 35 [Source:Xenbase;Acc:XB-GENE-1010748]) HSP 1 Score: 51.2174 bits (121), Expect = 4.885e-8 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 324 FFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 FF C C + Y E C P+ M ++L LRT R R+ I+GTI DC +C CA+CQ+ R+++ Sbjct: 57 FFPMCVACKVAQDYGECCCLPL-MGGTILALRTGIRERYHIQGTICTDCLCVTFCGPCALCQMARELE 123
BLAST of Placenta specific protein 8 vs. Ensembl Xenopus
Match: myo19 (myosin XIX [Source:Xenbase;Acc:XB-GENE-999897]) HSP 1 Score: 45.4394 bits (106), Expect = 4.953e-6 Identity = 22/68 (32.35%), Postives = 36/68 (52.94%), Query Frame = 3 Query: 324 FFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 F C C + Y E C P+ + +++ +RT R R+ I GTI DC +C C +CQ+ R+++ Sbjct: 42 FLPLCLACKVAQDYGECCCLPV-LNGTIIAMRTGIRERYQIPGTICNDCVCLTFCGPCTLCQMARELN 108
BLAST of Placenta specific protein 8 vs. Ensembl Mouse
Match: Plac8 (placenta-specific 8 [Source:MGI Symbol;Acc:MGI:2445289]) HSP 1 Score: 48.9062 bits (115), Expect = 2.259e-7 Identity = 33/121 (27.27%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 165 PTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 PT ++ QPG + P N N T + G + + T C+TC + + C+ + + +RT +R R+GI G+I +D T +C C++CQLKRD++ Sbjct: 5 PTVIVTQPGFVRAPQNSNWQTSLCDCFSDCG-------------------VCLCGTFCFTCLGCQVAADM--NECCLCGTTVAMRTLYRTRYGIPGSICDDYMVTLFCPVCSVCQLKRDIN 104
BLAST of Placenta specific protein 8 vs. Ensembl Mouse
Match: Plac8 (placenta-specific 8 [Source:MGI Symbol;Acc:MGI:2445289]) HSP 1 Score: 48.9062 bits (115), Expect = 2.259e-7 Identity = 33/121 (27.27%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 165 PTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 PT ++ QPG + P N N T + G + + T C+TC + + C+ + + +RT +R R+GI G+I +D T +C C++CQLKRD++ Sbjct: 5 PTVIVTQPGFVRAPQNSNWQTSLCDCFSDCG-------------------VCLCGTFCFTCLGCQVAADM--NECCLCGTTVAMRTLYRTRYGIPGSICDDYMVTLFCPVCSVCQLKRDIN 104
BLAST of Placenta specific protein 8 vs. Ensembl Mouse
Match: Plac8 (placenta-specific 8 [Source:MGI Symbol;Acc:MGI:2445289]) HSP 1 Score: 48.9062 bits (115), Expect = 2.259e-7 Identity = 33/121 (27.27%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 165 PTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 PT ++ QPG + P N N T + G + + T C+TC + + C+ + + +RT +R R+GI G+I +D T +C C++CQLKRD++ Sbjct: 5 PTVIVTQPGFVRAPQNSNWQTSLCDCFSDCG-------------------VCLCGTFCFTCLGCQVAADM--NECCLCGTTVAMRTLYRTRYGIPGSICDDYMVTLFCPVCSVCQLKRDIN 104
BLAST of Placenta specific protein 8 vs. UniProt/SwissProt
Match: sp|Q9JI48|PLAC8_MOUSE (Placenta-specific gene 8 protein OS=Mus musculus OX=10090 GN=Plac8 PE=1 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 1.580e-6 Identity = 33/121 (27.27%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 165 PTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 PT ++ QPG + P N N T + G + + T C+TC + + C+ + + +RT +R R+GI G+I +D T +C C++CQLKRD++ Sbjct: 5 PTVIVTQPGFVRAPQNSNWQTSLCDCFSDCG-------------------VCLCGTFCFTCLGCQVAADM--NECCLCGTTVAMRTLYRTRYGIPGSICDDYMVTLFCPVCSVCQLKRDIN 104
BLAST of Placenta specific protein 8 vs. TrEMBL
Match: G7YSZ5 (Cornifelin OS=Clonorchis sinensis OX=79923 GN=CLF_109843 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.005e-16 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 216 NQTTVIIQQPVANGP--RLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 ++ VI++QP A+G R W+ G+ C ++ ++C LT F C TCYL+ Y E TP + S + L +HR R+GIRG+I+EDC +C CAIC+L RDM +VE+ +G+L+ Sbjct: 5 DRGNVILEQPRASGTPYRAWNDGLWDCGNNHSNCFLTAFCYTCMTCYLYEKYGEGCLTPCIIPMSAMVLTVQHRNRNGIRGSILEDCLTHAFCSPCAICRLYRDMKFVEEIRGTLN 120
BLAST of Placenta specific protein 8 vs. TrEMBL
Match: A0A4S2L497 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010419 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.124e-16 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 216 NQTTVIIQQPVANGP--RLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 ++ VI++QP A+G R W+ G+ C ++ T+ LT F C TCYL+ Y E TP + S + L +HR R+GIRG I+EDC C CA+C+L RDM +VE+ KGSL+ Sbjct: 6 DRRNVILEQPRASGNPYRAWNDGLWDCGNNYTNSFLTAFCYTCMTCYLYEKYGEGCLTPCIIPMSAMVLTVQHRNRNGIRGNILEDCLTHAVCSPCAMCRLYRDMQFVEEIKGSLN 121
BLAST of Placenta specific protein 8 vs. TrEMBL
Match: A0A075A451 (Putative Cys-rich domain protein OS=Opisthorchis viverrini OX=6198 GN=T265_03197 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.804e-16 Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 216 NQTTVIIQQPVANGP--RLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 ++ VI++QP A+G R W+ G+ C ++ T+C LT F C TC+L+ Y E TP + S + L +HR R+GIRG I+EDC +C CAIC+L RDM +VE+ KGSL+ Sbjct: 5 DRGNVILEQPRASGNSYRAWNDGLWDCGNNYTNCFLTAFCYTCMTCHLYGKYGEGCLTPCIVPMSAMVLTVQHRNRNGIRGNILEDCLTHAFCSPCAICRLYRDMQFVEEIKGSLN 120
BLAST of Placenta specific protein 8 vs. TrEMBL
Match: A0A0P0DI19 (Placenta specific protein 8 OS=Dugesia japonica OX=6161 GN=Plac 8 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.292e-16 Identity = 52/124 (41.94%), Postives = 74/124 (59.68%), Query Frame = 3 Query: 183 QPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSL 554 QPG + V+I QP + R+WSS IC C +D C + FF CY C ++ Y+E C+ + + +S++ LR +HR RHGI+GTI +DC K+ C +CQLKRDM ++ TKGSL Sbjct: 17 QPGKTSE-------NVVISQPKSE--RMWSSEICSCFEDIEICLWSTFFPQCYLCCMYMEYNECFCSSLLVPNSLMALRIQHRNRHGIKGTICDDCIKSTCYGPCTMCQLKRDMKHIISTKGSL 131
BLAST of Placenta specific protein 8 vs. TrEMBL
Match: A0A5J4NRE5 (Uncharacterized protein OS=Paragonimus westermani OX=34504 GN=DEA37_0010981 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.956e-16 Identity = 56/133 (42.11%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 168 TPVLVQPGVMANPMNINQTTVIIQQPV---ANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 TP+L QP NQ VI+ QP G R W G+C C ++C +C LT FF C C+++ Y E CTP + S + L KHR+RH I G+I DCC C CA+C+L RDM YVE G+L Sbjct: 29 TPLLSQP---------NQINVIVNQPEPTRGTGYRDWHDGLCSCGNNCGNCLLTAFFYPCVECHMYQRYGECCCTPCVIPMSGMVLAVKHRSRHRIVGSISGDCCTFMCCAPCALCRLYRDMVYVEGVNGTLS 152
BLAST of Placenta specific protein 8 vs. Ensembl Cavefish
Match: ponzr5 (cornifelin homolog B-like [Source:NCBI gene;Acc:103036465]) HSP 1 Score: 46.9802 bits (110), Expect = 1.134e-6 Identity = 22/68 (32.35%), Postives = 36/68 (52.94%), Query Frame = 3 Query: 336 CYTCYLFHIYDEFLCTPICMYDSV----LQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 C+ C + E LC P+ + + L +R+ R R+GI G+I DC +++C C CQ+ R+M Sbjct: 44 CFACSTSKKFGECLCLPLLEFGFIPPITLAMRSSMRQRYGIEGSICNDCVYSFFCCPCVWCQMSREMK 111
BLAST of Placenta specific protein 8 vs. Ensembl Cavefish
Match: ponzr5 (cornifelin homolog B-like [Source:NCBI gene;Acc:103036465]) HSP 1 Score: 46.9802 bits (110), Expect = 1.134e-6 Identity = 22/68 (32.35%), Postives = 36/68 (52.94%), Query Frame = 3 Query: 336 CYTCYLFHIYDEFLCTPICMYDSV----LQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMD 527 C+ C + E LC P+ + + L +R+ R R+GI G+I DC +++C C CQ+ R+M Sbjct: 44 CFACSTSKKFGECLCLPLLEFGFIPPITLAMRSSMRQRYGIEGSICNDCVYSFFCCPCVWCQMSREMK 111
BLAST of Placenta specific protein 8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001184.1 (pep scaffold:Pmarinus_7.0:GL488356:6425:7851:-1 gene:ENSPMAG00000001063.1 transcript:ENSPMAT00000001184.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 47.3654 bits (111), Expect = 7.866e-8 Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 321 MFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDY 530 +F C C + + E C PI + S + LRT R R+ I+G+I +DC +C+ CA CQ+ R++ + Sbjct: 15 IFCMLCLNCRMAKDFGECFCLPI-LPGSSMALRTAIRERYHIQGSICDDCVMLTFCFCCATCQMAREIKH 83
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Match: SMESG000050177.1 (SMESG000050177.1) HSP 1 Score: 258.84 bits (660), Expect = 4.186e-89 Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 3 Query: 138 MQYDNRGFLPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 MQYDNRGFLPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWSSGICGCC+DCTSCCLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD Sbjct: 1 MQYDNRGFLPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWSSGICGCCEDCTSCCLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 140
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Match: SMESG000050175.1 (SMESG000050175.1) HSP 1 Score: 134.035 bits (336), Expect = 5.474e-40 Identity = 82/141 (58.16%), Postives = 100/141 (70.92%), Query Frame = 3 Query: 138 MQYDNRGFLPTPVLVQPGVMANPMNINQTTVIIQQPVA-NGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 MQYDN G V++QPGV P NQT +I QQP N PR WSS + GCC+DCTSC L++ F CY CYL+ ++EF+CTP+ S+L LRTKHRARH I+GTI+ D CK Y CY C +CQLKRDM+YVE+T GSLD Sbjct: 1 MQYDNNGLPCNTVIIQPGV---PTYGNQTVIIQQQPNQRNLPRDWSSELFGCCEDCTSCWLSLCFAECYLCYLYSKHNEFVCTPLFTPSSLLLLRTKHRARHRIKGTIMGDACKIYCCYICTMCQLKRDMNYVEETNGSLD 138
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Match: SMESG000050244.1 (SMESG000050244.1) HSP 1 Score: 112.079 bits (279), Expect = 1.767e-31 Identity = 71/132 (53.79%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 162 LPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 + T ++ QPG + NQ Q R WSSG+ CCDDCTSC L F CY CY++HIY EF+CTP+ S L LRTKHR+R+ I+G+II DCC TYWCY+CA+CQLKRDMDYVED G L+ Sbjct: 1 MTTVIITQPG------HKNQVITRQDQIPRTTYRNWSSGLFDCCDDCTSCVLIAFCPECYLCYMYHIYYEFVCTPLFTPASTLLLRTKHRSRNHIKGSIIADCCLTYWCYFCAMCQLKRDMDYVEDKNGYLE 126
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Match: SMESG000050244.1 (SMESG000050244.1) HSP 1 Score: 110.923 bits (276), Expect = 5.429e-31 Identity = 72/135 (53.33%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 162 LPTPVLVQPGVMANPMNINQTTVII---QQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 + T ++ QPG + NQ +I Q R WSSG+ CCDDCTSC L F CY CY++HIY EF+CTP+ S L LRTKHR+R+ I+G+II DCC TYWCY+CA+CQLKRDMDYVED G L+ Sbjct: 1 MTTVIITQPG------HKNQVAPVITRQDQIPRTTYRNWSSGLFDCCDDCTSCVLIAFCPECYLCYMYHIYYEFVCTPLFTPASTLLLRTKHRSRNHIKGSIIADCCLTYWCYFCAMCQLKRDMDYVEDKNGYLE 129
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Match: SMESG000050245.1 (SMESG000050245.1) HSP 1 Score: 108.612 bits (270), Expect = 3.742e-30 Identity = 69/132 (52.27%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 162 LPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWXXXXXXXXXXXXXXXLTMFFTHCYTCYLFHIYDEFLCTPICMYDSVLQLRTKHRARHGIRGTIIEDCCKTYWCYWCAICQLKRDMDYVEDTKGSLD 557 + T + QPG NQ Q R WSSG+ CCDDC SC F CY CY++HIY EF+CTP+ S L LRTKHR+R+ I+G+II DCC TYWCY+CA+CQLKRDMDYVED G L+ Sbjct: 1 MTTVFVTQPG------QGNQAITRQNQIAEPTYRNWSSGLFDCCDDCASCWCVTFCPECYLCYMYHIYYEFVCTPLFTPASTLLLRTKHRSRNHIKGSIIADCCLTYWCYFCAMCQLKRDMDYVEDKNGYLE 126 The following BLAST results are available for this feature:
BLAST of Placenta specific protein 8 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Placenta specific protein 8 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Placenta specific protein 8 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Placenta specific protein 8 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of Placenta specific protein 8 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 4
BLAST of Placenta specific protein 8 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Placenta specific protein 8 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of Placenta specific protein 8 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Placenta specific protein 8 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of Placenta specific protein 8 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Placenta specific protein 8 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Placenta specific protein 8 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Placenta specific protein 8 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Placenta specific protein 8 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023073 ID=SMED30023073|Name=Placenta specific protein 8|organism=Schmidtea mediterranea sexual|type=transcript|length=651bpback to top protein sequence of SMED30023073-orf-1 >SMED30023073-orf-1 ID=SMED30023073-orf-1|Name=SMED30023073-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=141bp MQYDNRGFLPTPVLVQPGVMANPMNINQTTVIIQQPVANGPRLWSSGICGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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