Polypyrimidine tract-binding protein 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30023057 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10
Homology
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 345.51 bits (885), Expect = 7.066e-112 Identity = 205/531 (38.61%), Postives = 297/531 (55.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNN-NSNIDKL------VQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K E +D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + + ++IQ+S H++L N N + VQ+AN ++ + T S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P A A AA G + GN+V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+ NS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ +E DL + G VK FKF D KMALL++ +VE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 42 NDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAG---------------GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKS 530
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]) HSP 1 Score: 345.51 bits (885), Expect = 9.931e-112 Identity = 208/531 (39.17%), Postives = 303/531 (57.06%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNN-NSNIDKL------VQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K E +D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + + ++IQ+S H++L N N + VQ+AN ++ + T S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P AA+ A A A + G M ++G GN+V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+ NS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ +E DL + G VK FKF D KMALL++ +VE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 42 NDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVG-------MPGVSAG---GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKS 535
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP3 (polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]) HSP 1 Score: 343.199 bits (879), Expect = 4.776e-111 Identity = 202/537 (37.62%), Postives = 295/537 (54.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN----NNSNIDKLVQSANEKRKHYLINWANNTG----GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFG-----SNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+H+R +P +V + + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N + SA + L +N G G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+RIDFSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q + G S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 15 NDSKKFKRDRP-PCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 522
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP3 (polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]) HSP 1 Score: 343.969 bits (881), Expect = 7.461e-111 Identity = 202/537 (37.62%), Postives = 295/537 (54.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN----NNSNIDKLVQSANEKRKHYLINWANNTG----GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFG-----SNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+H+R +P +V + + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N + SA + L +N G G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+RIDFSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q + G S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 49 NDSKKFKRDRP-PCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 556
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP3 (polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]) HSP 1 Score: 342.813 bits (878), Expect = 1.402e-110 Identity = 202/537 (37.62%), Postives = 295/537 (54.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN----NNSNIDKLVQSANEKRKHYLINWANNTG----GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFG-----SNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+H+R +P +V + + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N + SA + L +N G G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+RIDFSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q + G S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 43 NDSKKFKRDRP-PCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 550
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 288.886 bits (738), Expect = 1.812e-89 Identity = 188/520 (36.15%), Postives = 285/520 (54.81%), Query Frame = 3
Query: 159 SRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYM-------ESPLNRTELQELEGPQYSFPL----FAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAG 1682
S+V+H+RN+P ++ D + L + +G + N + ++ +QA ++ E A + G+ LF Q+S H++L N + I AN ++ + + +LR +I+N ++ V Y++F+R+G+++RI++F KNN LV+ + S+ +A+ L N+ C T+RID+SK L V+ +DK RDY E L +T + G Q P FA G + + F+T QL+A + + AA+L N + +A+ + S ++M P + N V+LV+NL+ K DALFTLFGVYGDVMRVK+++NKK+ AL+Q++ QQA A+ +LD + + + SK +Q+P E + GLT+DY++STLHRFKKP SKNY NI+PP A +HLSNIP + SE L +M AG+ VK FKF P D KMAL +L +E AI LI HN KL+E HLR+SFSK+G
Sbjct: 120 SKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKA-ISDTESVANGSVSNFEVGTQQQ---PNSVLRTIIENM-MFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKL-STLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATT------FLTTQLAASTAAAAAVND---SANAAALAPYLNPLGLTSANLA-------PSISSMRFP---MINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSG 614
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 257.299 bits (656), Expect = 2.729e-79 Identity = 163/405 (40.25%), Postives = 234/405 (57.78%), Query Frame = 3
Query: 504 ILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYM-------ESPLNRTELQELEGPQYSFPL----FAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAG 1682
+LR +I+N ++ V Y++F+R+G+++RI++F KNN LV+ + S+ +A+ L N+ C T+RID+SK L V+ +DK RDY E L +T + G Q P FA G + + F+T QL+A + + AA+L N + +A+ + S ++M P + N V+LV+NL+ K DALFTLFGVYGDVMRVK+++NKK+ AL+Q++ QQA A+ +LD + + + SK +Q+P E + GLT+DY++STLHRFKKP SKNY NI+PP A +HLSNIP + SE L +M AG+ VK FKF P D KMAL +L +E AI LI HN KL+E HLR+SFSK+G
Sbjct: 69 VLRTIIENM-MFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKL-STLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATT------FLTTQLAASTAAAAAVND---SANAAALAPYLNPLGLTSANLA-------PSISSMRFP---MINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSG 452
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 257.299 bits (656), Expect = 2.729e-79 Identity = 163/405 (40.25%), Postives = 234/405 (57.78%), Query Frame = 3
Query: 504 ILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYM-------ESPLNRTELQELEGPQYSFPL----FAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAG 1682
+LR +I+N ++ V Y++F+R+G+++RI++F KNN LV+ + S+ +A+ L N+ C T+RID+SK L V+ +DK RDY E L +T + G Q P FA G + + F+T QL+A + + AA+L N + +A+ + S ++M P + N V+LV+NL+ K DALFTLFGVYGDVMRVK+++NKK+ AL+Q++ QQA A+ +LD + + + SK +Q+P E + GLT+DY++STLHRFKKP SKNY NI+PP A +HLSNIP + SE L +M AG+ VK FKF P D KMAL +L +E AI LI HN KL+E HLR+SFSK+G
Sbjct: 69 VLRTIIENM-MFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKL-STLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSIPGLQNLIPANPYNFAFGANPATT------FLTTQLAASTAAAAAVND---SANAAALAPYLNPLGLTSANLA-------PSISSMRFP---MINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKEGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSG 452
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 60.077 bits (144), Expect = 1.678e-9 Identity = 50/223 (22.42%), Postives = 101/223 (45.29%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQE 824
PS V+H+RN+ Q+V + + FG + + + AL++ ++ G + F+ Q+++ + + E+ + + + T +++L + + NA I+ V Y+I + G+++R+ K LVEF S + A+ +NGA++ C T++++F+K P ++VQRQ RD+ P NR ++
Sbjct: 30 PSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIE-----------------GAKACVNFATSNQINVGGQGALFNYSTSQCIER-----MGFESAT--PNKVLVVTVLNA-QYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK-PDRVRVQRQDKDQRDFT-LPDNRRPYED 225
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 59.6918 bits (143), Expect = 3.962e-9 Identity = 47/211 (22.27%), Postives = 96/211 (45.50%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDY 788
PS V+H+RN+ Q+V + + FG + + + AL++ ++ G + F+ Q+++ + + E+ + + + T +++L + + NA I+ V Y+I + G+++R+ K LVEF S + A+ +NGA++ C T++++F+K P ++VQRQ RD+
Sbjct: 30 PSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIE-----------------GAKACVNFATSNQINVGGQGALFNYSTSQCIER-----MGFESAT--PNKVLVVTVLNA-QYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK-PDRVRVQRQDKDQRDF 214 HSP 2 Score: 53.9138 bits (128), Expect = 2.396e-7 Identity = 47/181 (25.97%), Postives = 73/181 (40.33%), Query Frame = 3
Query: 1101 NSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQ-----LPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSD-MIRIAGYEVKKFKFLP--NDKKMA-LLELNSVEDAIHVL 1616
V+++ L K N D LF + YG+V+R+ M K T +++ ++ + L L+G + S + + D + KDYS+S RF P I P+ +H N P T E L D M ++ K P N++ A E +VE A VL
Sbjct: 307 GCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPDGSPSF-KDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAAGTAEFETVEIANEVL 486
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0346192) HSP 1 Score: 333.183 bits (853), Expect = 1.632e-106 Identity = 217/573 (37.87%), Postives = 306/573 (53.40%), Query Frame = 3
Query: 99 NSFDNSHKKVKMEQGID-----EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQL--DLRNNNSNI--DKLVQSANEKRKHYL-----------------------------INWANNT---GGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVE----LTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N+ D + KK K+E G K S+VIH+RN+P E + V L +PFG + N++ ++ NQA I+M + A M + P M G+ +++QFS H++L D +NNS D VQS L +N NT GG + +LR+++++ ++ + ++IF R+G++++IV+FTKNN L+++ S+ A+ L+G N+ C T+RID SK L V+ +DK RD+ L E P A G + ND + A+ S G+ L P A L N A S G+ Q+ G N V+LV+NLN E PDALFTLFGVYGDV RVK+++NKK++AL+Q A QQA A+ +LD LWGK + + SK +QLP E + GLT+DYS + LHRFKKP SKNYQNI+PPSA +HLSNIP + SE D+ + +EVK FKF P D+KMALL+L SVE+A+ LI+ HN +LSE NHLR+SFSK+
Sbjct: 48 NNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESL-MYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTA-LNVKYNNDKSRDFTNPALPPGE------PGVDIMPTAGG----LMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMR---GYSN---VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 602
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0306692) HSP 1 Score: 333.569 bits (854), Expect = 1.656e-104 Identity = 217/573 (37.87%), Postives = 306/573 (53.40%), Query Frame = 3
Query: 99 NSFDNSHKKVKMEQGID-----EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQL--DLRNNNSNI--DKLVQSANEKRKHYL-----------------------------INWANNT---GGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVE----LTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N+ D + KK K+E G K S+VIH+RN+P E + V L +PFG + N++ ++ NQA I+M + A M + P M G+ +++QFS H++L D +NNS D VQS L +N NT GG + +LR+++++ ++ + ++IF R+G++++IV+FTKNN L+++ S+ A+ L+G N+ C T+RID SK L V+ +DK RD+ L E P A G + ND + A+ S G+ L P A L N A S G+ Q+ G N V+LV+NLN E PDALFTLFGVYGDV RVK+++NKK++AL+Q A QQA A+ +LD LWGK + + SK +QLP E + GLT+DYS + LHRFKKP SKNYQNI+PPSA +HLSNIP + SE D+ + +EVK FKF P D+KMALL+L SVE+A+ LI+ HN +LSE NHLR+SFSK+
Sbjct: 243 NNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESL-MYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTA-LNVKYNNDKSRDFTNPALPPGE------PGVDIMPTAGG----LMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMR---GYSN---VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 797
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0306693) HSP 1 Score: 333.954 bits (855), Expect = 7.782e-104 Identity = 217/573 (37.87%), Postives = 306/573 (53.40%), Query Frame = 3
Query: 99 NSFDNSHKKVKMEQGID-----EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQL--DLRNNNSNI--DKLVQSANEKRKHYL-----------------------------INWANNT---GGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVE----LTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N+ D + KK K+E G K S+VIH+RN+P E + V L +PFG + N++ ++ NQA I+M + A M + P M G+ +++QFS H++L D +NNS D VQS L +N NT GG + +LR+++++ ++ + ++IF R+G++++IV+FTKNN L+++ S+ A+ L+G N+ C T+RID SK L V+ +DK RD+ L E P A G + ND + A+ S G+ L P A L N A S G+ Q+ G N V+LV+NLN E PDALFTLFGVYGDV RVK+++NKK++AL+Q A QQA A+ +LD LWGK + + SK +QLP E + GLT+DYS + LHRFKKP SKNYQNI+PPSA +HLSNIP + SE D+ + +EVK FKF P D+KMALL+L SVE+A+ LI+ HN +LSE NHLR+SFSK+
Sbjct: 342 NNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESL-MYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTA-LNVKYNNDKSRDFTNPALPPGE------PGVDIMPTAGG----LMNTNDLLLIAARQRPSLSVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAFSLANSGALQTTAPAMR---GYSN---VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 896
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300265) HSP 1 Score: 235.343 bits (599), Expect = 2.141e-70 Identity = 113/192 (58.85%), Postives = 143/192 (74.48%), Query Frame = 3
Query: 1107 VVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
V+LV+NLN E PDALFTLFGVYGDV RVK+++NKK++AL+Q A QQA A+ +LD LWGK + + SK +QLP E + GLT+DYS + LHRFKKP SKNYQNI+PPSA +HLSNIP + SE D+ + +EVK FKF P D+KMALL+L SVE+A+ LI+ HN +LSE NHLR+SFSK+
Sbjct: 300 VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 491 HSP 2 Score: 75.485 bits (184), Expect = 3.838e-14 Identity = 58/207 (28.02%), Postives = 96/207 (46.38%), Query Frame = 3
Query: 303 EAIEMADYFNQYVPLMYGKHLFIQFSKHQQL--DLRNNNSNI--DKLVQSANEKRKHYL-----------------------------INWANNT---GGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTE 815
A M + P M G+ +++QFS H++L D +NNS D VQS L +N NT GG + +LR+++++ ++ + ++IF R+G++++IV+FTKNN L+++ S+ A+ L+G N+ C T+RID SK L V+ +DK RD+ L E
Sbjct: 6 SATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESL-MYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTA-LNVKYNNDKSRDFTNPALPPGE 210
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300268) HSP 1 Score: 235.728 bits (600), Expect = 1.102e-69 Identity = 113/192 (58.85%), Postives = 143/192 (74.48%), Query Frame = 3
Query: 1107 VVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
V+LV+NLN E PDALFTLFGVYGDV RVK+++NKK++AL+Q A QQA A+ +LD LWGK + + SK +QLP E + GLT+DYS + LHRFKKP SKNYQNI+PPSA +HLSNIP + SE D+ + +EVK FKF P D+KMALL+L SVE+A+ LI+ HN +LSE NHLR+SFSK+
Sbjct: 388 VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKS 579 HSP 2 Score: 124.79 bits (312), Expect = 7.482e-30 Identity = 85/280 (30.36%), Postives = 138/280 (49.29%), Query Frame = 3
Query: 99 NSFDNSHKKVKMEQGID-----EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQL--DLRNNNSNI--DKLVQSANEKRKHYL-----------------------------INWANNT---GGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTE 815
N+ D + KK K+E G K S+VIH+RN+P E + V L +PFG + N++ ++ NQA I+M + A M + P M G+ +++QFS H++L D +NNS D VQS L +N NT GG + +LR+++++ ++ + ++IF R+G++++IV+FTKNN L+++ S+ A+ L+G N+ C T+RID SK L V+ +DK RD+ L E
Sbjct: 21 NNQDLATKKAKLEPGTVLAGGIAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTNAAGGPNTVLRVIVESL-MYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTA-LNVKYNNDKSRDFTNPALPPGE 298
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1a (polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]) HSP 1 Score: 340.117 bits (871), Expect = 2.465e-109 Identity = 206/539 (38.22%), Postives = 300/539 (55.66%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL----INWANNTGGASEILRILIDNA--PNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTE------LQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIEN-GNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRVIH+R +P ++++ V L +PFG + N++ ++ NQA ++M A M Y++ P++ +F+Q+S H++L N N +Q+ N + + I+ A G S +LR++++N P + V ++IFS+FG +++I++FTKNNQ LV+++ +++ A+L L+G N+ C T+RI FSK L V+ +DK RDY L + Q + + P + A G Q F Q + ++ Q G+ A A+ + A G SG+ GNSV+LV+NLN E P LF LFGVYGDVMRVK++FNKK ALVQ ++ QA A+ +L+ L+GK + +SK +QLP E + GLTKDYSNS LHRFKKP SKNY NIFPPS+ +HLSNIPP+ +E DL + +G VK FKF D+KMAL++L SVE+AI LI+FHN L E +HLR+SFSK+
Sbjct: 57 NDSKKFKGDIRSPGIPSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEESAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGGMSLAAIDGAG-MGSQSPVLRVIVENLFYP---VTLDVLHQIFSKFGTVLKIITFTKNNQFQALVQYSDGMTAQHAKLSLDGQNIYNACCTLRISFSKLTS-LNVKYNNDKSRDYTRPDLPTGDSQPSFDAQTMAAAALTAPGIISASPYAGAHGFPQAFAIQQAAGLSLQ-GMP----AGALASLSVPGAAAAAAAAAAAGRLGL-------------SGLTAAGNSVLLVSNLNPESVTPQCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLAMSHLNGQKLYGKALRATLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDDLRGLFLSSGAVVKAFKFFQKDRKMALIQLASVEEAIESLIKFHNHDLGENHHLRVSFSKS 572
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 335.495 bits (859), Expect = 2.501e-108 Identity = 200/527 (37.95%), Postives = 294/527 (55.79%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL----INWANNTG---GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVG---------RSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
PSRV+H+R VP EV + V L VPFG + N++ ++ NQA I+M A+ M +Y+ P + + ++IQ+S H++L N N +Q+ N + A++ G G S +LRI+++N ++ V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+R++FSK L V+ +DK RD+ L + Q P A G + A G Q ++ Q AM G P + M R A + A+ +SV+LV+NLN + +P LF LFGVYGDV RVK++FNKK AL+Q A+ QA A+ +L+ L+GK + + +SK +QLP E + GLTKD+S S LHRFKKP SKN+QNIFPPSA +HLSNIPP+T++ L D+ +GY VK FKF D+KMAL++L SVE+AI LI HN L E +HLR+SFSK+
Sbjct: 19 PSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENL-YYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTS-LNVKYNNDKSRDFTRLDLPSGDGQPTLDPTMQTAFGAPGIISSPYPGAAGFAPAIGFPQAGLSMQ--AMPGALGPLTIP------------SSAMTGRMAIH-------GMTPTAI----------HSVLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTVQLPREGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQKDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKS 512
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 335.109 bits (858), Expect = 4.657e-108 Identity = 200/527 (37.95%), Postives = 294/527 (55.79%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL----INWANNTG---GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVG---------RSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
PSRV+H+R VP EV + V L VPFG + N++ ++ NQA I+M A+ M +Y+ P + + ++IQ+S H++L N N +Q+ N + A++ G G S +LRI+++N ++ V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+R++FSK L V+ +DK RD+ L + Q P A G + A G Q ++ Q AM G P + M R A + A+ +SV+LV+NLN + +P LF LFGVYGDV RVK++FNKK AL+Q A+ QA A+ +L+ L+GK + + +SK +QLP E + GLTKD+S S LHRFKKP SKN+QNIFPPSA +HLSNIPP+T++ L D+ +GY VK FKF D+KMAL++L SVE+AI LI HN L E +HLR+SFSK+
Sbjct: 27 PSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENL-YYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTS-LNVKYNNDKSRDFTRLDLPSGDGQPTLDPTMQTAFGAPGIISSPYPGAAGFAPAIGFPQAGLSMQ--AMPGALGPLTIP------------SSAMTGRMAIH-------GMTPTAI----------HSVLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTVQLPREGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQKDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKS 520
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 335.109 bits (858), Expect = 4.657e-108 Identity = 200/527 (37.95%), Postives = 294/527 (55.79%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL----INWANNTG---GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVG---------RSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
PSRV+H+R VP EV + V L VPFG + N++ ++ NQA I+M A+ M +Y+ P + + ++IQ+S H++L N N +Q+ N + A++ G G S +LRI+++N ++ V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+R++FSK L V+ +DK RD+ L + Q P A G + A G Q ++ Q AM G P + M R A + A+ +SV+LV+NLN + +P LF LFGVYGDV RVK++FNKK AL+Q A+ QA A+ +L+ L+GK + + +SK +QLP E + GLTKD+S S LHRFKKP SKN+QNIFPPSA +HLSNIPP+T++ L D+ +GY VK FKF D+KMAL++L SVE+AI LI HN L E +HLR+SFSK+
Sbjct: 27 PSRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSPVLRIIVENL-YYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTS-LNVKYNNDKSRDFTRLDLPSGDGQPTLDPTMQTAFGAPGIISSPYPGAAGFAPAIGFPQAGLSMQ--AMPGALGPLTIP------------SSAMTGRMAIH-------GMTPTAI----------HSVLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTVQLPREGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQKDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKS 520
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp2b (polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]) HSP 1 Score: 323.939 bits (829), Expect = 1.162e-103 Identity = 204/558 (36.56%), Postives = 304/558 (54.48%), Query Frame = 3
Query: 69 YSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNN-NSNIDKLVQ--SANEKRKHYLINWANN---TGGASEILRILIDNA--PNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPN------------SGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDA-NHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
YS + N D+ KK+++E +D PSRVIHIR +P EV +T V L +PFG + NI+ ++ NQA +++ A+ M +Y+ P + +FIQ+S H++L + N ++Q SA ++ + A+ T S +LRI+IDN P + V +IFS+FG +++I++FTKNNQ L++F+ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R EL +G V SM+ A D + S M T+ S GF S+ + + SG V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q ++ QA A+ +L+ ++GK + + +SK +QLP E + GLTKD+++S LHRFKKP SKN+QNIFPPSA +HLSNIP +E DL + +G VK FKF D+KM+LL++ + E+AI LI+ HN + + LR+SFSK+
Sbjct: 25 YSSPNSSVTANGSDS--KKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDMASKSVLTPAPSPVLRIIIDNMFYP---VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPELPAGDGQP------PVDPSMAAALSKDSPSLLGTPSGMV----------------------------TSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSVPGGVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRLLFSNSGGTVKAFKFF-QDRKMSLLQMATAEEAIQALIDLHNYDMGRGHRLRVSFSKS 536
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 329.331 bits (843), Expect = 1.300e-105 Identity = 197/534 (36.89%), Postives = 301/534 (56.37%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDK----------LVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDA-NHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K + ++ PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ A M +Y+ P + + ++IQ+S H++L +S +++ VQ++N N + S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P A + + + S+ M ++G GN+V+LV+NLN E +P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIP +E DL + G VK FKF D KMALL++++VE+AI LI+ HN + + +HLR+SFSK+
Sbjct: 42 NDNKKFKGDDKMEAAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKEL---KTDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLAVPGALSPLG------------IPNAAAAAAAAAASRVGMHGVSTG---GNTVLLVSNLNEEMVSPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGGNVKAFKFF-QDHKMALLQMSTVEEAIQALIDLHNYNIGDNHHLRVSFSKS 529
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 327.02 bits (837), Expect = 6.455e-105 Identity = 195/535 (36.45%), Postives = 294/535 (54.95%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWANNTG------GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG---FGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+HIR +P +V ++ + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N N + +Q+ N + L + G G S +LRI+++N + V ++IFS+FG +I+I++FTKNNQ L+++A +++H A++ L+G N+ C T+RI+FSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q G ++ M P G+SV+LV+NLN + P LF LFGVYGDV RVK++FNKK ALVQ + QA A+ +L+ L G+ + + +SK +QLP E + GLTKDY+NS LHRFKKP SKN+QNIFPPSA +HLSNIPP ++ DL + G VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 12 NDSKKFKGDRS-PCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENL-FYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLDTTMAAAFGAPGIISSPYAGAAGFAPAIGFPQAGLSVPGVPGLGPLALTTSAITGRMAIPGMTAIPGHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPREGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKS 517
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 327.02 bits (837), Expect = 9.564e-105 Identity = 195/535 (36.45%), Postives = 294/535 (54.95%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWANNTG------GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG---FGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+HIR +P +V ++ + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N N + +Q+ N + L + G G S +LRI+++N + V ++IFS+FG +I+I++FTKNNQ L+++A +++H A++ L+G N+ C T+RI+FSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q G ++ M P G+SV+LV+NLN + P LF LFGVYGDV RVK++FNKK ALVQ + QA A+ +L+ L G+ + + +SK +QLP E + GLTKDY+NS LHRFKKP SKN+QNIFPPSA +HLSNIPP ++ DL + G VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 23 NDSKKFKGDRS-PCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENL-FYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLDTTMAAAFGAPGIISSPYAGAAGFAPAIGFPQAGLSVPGVPGLGPLALTTSAITGRMAIPGMTAIPGHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPREGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKS 528
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 327.405 bits (838), Expect = 9.851e-105 Identity = 197/547 (36.01%), Postives = 294/547 (53.75%), Query Frame = 3
Query: 105 FDNSHKKVKMEQGIDEK----------PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWANNTG------GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG---FGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
F SH G D K PSRV+HIR +P +V ++ + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N N + +Q+ N + L + G G S +LRI+++N + V ++IFS+FG +I+I++FTKNNQ L+++A +++H A++ L+G N+ C T+RI+FSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q G ++ M P G+SV+LV+NLN + P LF LFGVYGDV RVK++FNKK ALVQ + QA A+ +L+ L G+ + + +SK +QLP E + GLTKDY+NS LHRFKKP SKN+QNIFPPSA +HLSNIPP ++ DL + G VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 26 FTMSHSTPATANGNDSKKFKGDRSPCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENL-FYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLDTTMAAAFGAPGIISSPYAGAAGFAPAIGFPQAGLSVPGVPGLGPLALTTSAITGRMAIPGMTAIPGHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPREGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKS 544
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 326.25 bits (835), Expect = 1.811e-104 Identity = 195/535 (36.45%), Postives = 294/535 (54.95%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWANNTG------GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG---FGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+HIR +P +V ++ + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N N + +Q+ N + L + G G S +LRI+++N + V ++IFS+FG +I+I++FTKNNQ L+++A +++H A++ L+G N+ C T+RI+FSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q G ++ M P G+SV+LV+NLN + P LF LFGVYGDV RVK++FNKK ALVQ + QA A+ +L+ L G+ + + +SK +QLP E + GLTKDY+NS LHRFKKP SKN+QNIFPPSA +HLSNIPP ++ DL + G VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 21 NDSKKFKGDRS-PCSPSRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENL-FYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLDTTMAAAFGAPGIISSPYAGAAGFAPAIGFPQAGLSVPGVPGLGPLALTTSAITGRMAIPGMTAIPGHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPREGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQKDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKS 526
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp2 (polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]) HSP 1 Score: 346.665 bits (888), Expect = 2.099e-112 Identity = 204/531 (38.42%), Postives = 298/531 (56.12%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLV-------QSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K E +D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + + ++IQ+S H++L N + ++V Q+AN ++ + T S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P A A AA G + GN+V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+ NS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ +E DL + G VK FKF D KMALL++ +VE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 42 NDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAG---------------GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKS 530
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 345.125 bits (884), Expect = 5.649e-112 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 14 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 521
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 344.739 bits (883), Expect = 7.209e-112 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 11 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 518
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 344.739 bits (883), Expect = 7.209e-112 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 11 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 518
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 344.739 bits (883), Expect = 1.954e-111 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 42 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 549
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q8BHD7|PTBP3_MOUSE (Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.952e-111 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 14 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVPAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 521
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q9Z118|PTBP3_RAT (Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 9.636e-111 Identity = 207/533 (38.84%), Postives = 290/533 (54.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--------NNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPME-DANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK K ++ PSRV+H+R +P +V + V L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N VQS N N G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A++ L+G N+ C T+RIDFSK L V+ +DK RD+ L + Q LE P + F MS F A A+ V P A S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 14 NDNKKFKGDRP-PCSPSRVLHLRKIPCDVTEAEVISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATSNEGTLLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAA--AFGAPGIMSSPYAGAAGFAPAIAFPQAAGLSVSAVPGAL--------------------GPLTLTSSAVSGRMAIPGASGIPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQIAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 521
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q66H20|PTBP2_RAT (Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 3.040e-110 Identity = 204/531 (38.42%), Postives = 298/531 (56.12%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLV-------QSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K E +D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + + ++IQ+S H++L N + ++V Q+AN ++ + T S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P A A AA G + GN+V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+ NS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ +E DL + G VK FKF D KMALL++ +VE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 42 NDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAG---------------GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFF-QDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKS 529
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q91Z31|PTBP2_MOUSE (Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 3.040e-110 Identity = 204/531 (38.42%), Postives = 298/531 (56.12%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLV-------QSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K E +D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + + ++IQ+S H++L N + ++V Q+AN ++ + T S +LRI+IDN + V ++IFS+FG +++I++FTKNNQ L+++ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R +L +G P A +A A +T + P A A AA G + GN+V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ Q+ A+ +L+ ++GK + + +SK +QLP E + GLTKD+ NS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ +E DL + G VK FKF D KMALL++ +VE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 42 NDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPDLPSGDGQPALDPAIA--------------------AAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAG---------------GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFF-QDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKS 529
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|O95758|PTBP3_HUMAN (Polypyrimidine tract-binding protein 3 OS=Homo sapiens OX=9606 GN=PTBP3 PE=1 SV=2) HSP 1 Score: 342.813 bits (878), Expect = 6.734e-110 Identity = 202/537 (37.62%), Postives = 295/537 (54.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN----NNSNIDKLVQSANEKRKHYLINWANNTG----GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFG-----SNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K ++ PSRV+H+R +P +V + + L +PFG + N++ ++ +QA ++M A+ M +Y+ P + + ++IQ+S H++L N + SA + L +N G G S +LRI+I+N + V ++IFS+FG +++I++FTKNNQ L+++A +++H A++ L+G N+ C T+RIDFSK L V+ +DK RD+ + + G+ Q + ++A G+ +P A A + Q + G S+ M P + GNSV+LVTNLN + P LF LFGVYGDV RVK+MFNKK ALVQ A+ QA A+ +L L+GK + +SK +QLP E + GLTKD+SNS LHRFKKP SKN+QNIFPPSA +HLSNIPP+ + DL ++ AG VK FKF D+KMAL++L SVE+AI LIE HN L E +HLR+SFSK+
Sbjct: 43 NDSKKFKRDRP-PCSPSRVLHLRKIPCDVTEAEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVTMVNYYTPITPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGSLALSGGPSNEGTVLPGQSPVLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFSKLTS-LNVKYNNDKSRDFTR--------------------------LDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKS 550
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A183B4Q9 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS14195 PE=4 SV=1) HSP 1 Score: 456.833 bits (1174), Expect = 5.110e-151 Identity = 260/599 (43.41%), Postives = 365/599 (60.93%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMA------RGNDQQF--------------------------------MTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQ-------------------------------MNHRTADQSNWG-FGSN------QSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N +KK +ME ++ PS+V+HIRN+P + + +A+L +PFG ++N+V +K QALI+M+ L AI M Y+ +Y + G++L +QFSKHQ L+L + N+NI +++AN + L N G + +LR+L+DN INH + +KIF R+G+I+RI+++ KNNQ+HGL+EF + + + VA L LNG N+ C ++R++FSKN GPL+V+ ++DK RDY+ +PL EL L +Y+ G S A G Q F +TAQL+A+A Q+G+ LTPAA A AS MA Q M+H T N G GS+ + A PN+ NG +V++V+NL+ E+ PDALFTLFGVYGDV RVK+MFNKK+TALVQFA+ QQA+TA++ L LWGK M + VS+ NV+QLP ED+++GLTKDYS S LHRF+KPNSKNY NI+PPS V+HLSNIPPT SE D+ + G+EV F+F+ DKKMAL++L+S++ AI LIE HN +L+E +HLRISFSK+
Sbjct: 14 NENKKSRMEY-VETVPSKVVHIRNMPNDASEQEIALLGIPFGLLENMVLSKKAGQALIEMQSLESAIHMVSYYREYQVTLRGRNLVMQFSKHQHLELHSENTNIGDAIKNANCIVQQDL--CGANCGIPNTVLRVLVDNIMGQQINHTILHKIFYRYGKILRIITYLKNNQYHGLIEFENHIHAFVAMLHLNGQNIYTGCCSLRVEFSKNRGPLEVRHENDKCRDYINNPLTEEELINLR--RYTSGSMTSGTSGGGAPHGGNPTGMVQHFQGAVVPGMTPQGLHLPVGMIAPPSTSNAGINDLTAQLAALAQQSGLALTPAAVAATASFMAMTAQNNAVGAQSVPSTPNLAALLAAIQGGTVQNPMMSHLTG--GNPGPLGSHALSQHGTAPGARPPPNN---NGGTVLIVSNLHEERVYPDALFTLFGVYGDVTRVKIMFNKKDTALVQFADPQQALTALQFLSGQRLWGKTMKIAVSRHNVVQLPREDSDNGLTKDYSTSLLHRFRKPNSKNYMNIYPPSHVLHLSNIPPTISEEDIRLLFAAKGFEVTGFRFMQKDKKMALVQLDSIDTAIQALIELHNTQLTENSHLRISFSKS 602
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: G4VQG0 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 GN=Smp_036590.1 PE=4 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 3.810e-146 Identity = 246/591 (41.62%), Postives = 362/591 (61.25%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYS------------------------------FPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG-------------------------------FGSNQSQNAMFNPNSGIE-----NGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
N +KK ++E ++ PS+V+HIRN+P + + +A+L +PFG ++N+V +K NQAL++M+ L AI M Y+ +Y + G++L +Q+SKHQ L+L + NS+I +Q+AN + L N+G + +LR+++DN INH + +KIF R+G+I+RIV++ KNNQ+HGLVEF + + + VA L LNG N+ C ++R+ FSKN GPL+V+++SD+ RDY+ +PL EL L P P+ + + + G ++ +TAQL+A+A Q+G+ LTPAA A AS MA +Q N QS G GS Q+ + G+ NG++V++V+NLN ++ PDALFTLFGVYGDV RVK+MFNKK+TAL+QF + QA+TA++ L+ LW K M + VS+ N++QLP ED +GLTKDY+NS LHRF+KPNSKN+QNI+PPS V+HLSNIPP+ +E D+ + G+EV F+F+ D KMAL++L +V+ AI LIE HN +L+E +HLRISFSK+
Sbjct: 14 NENKKSRIEY-VETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDL--SGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSMGINE--LTAQLAALAQQSGLALTPAAVAATASFMALTSQ-NSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGVRSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHNIVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFM-KDNKMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSKSAV 597
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A3Q0KEH4 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 444.506 bits (1142), Expect = 4.792e-146 Identity = 246/591 (41.62%), Postives = 362/591 (61.25%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYS------------------------------FPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG-------------------------------FGSNQSQNAMFNPNSGIE-----NGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
N +KK ++E ++ PS+V+HIRN+P + + +A+L +PFG ++N+V +K NQAL++M+ L AI M Y+ +Y + G++L +Q+SKHQ L+L + NS+I +Q+AN + L N+G + +LR+++DN INH + +KIF R+G+I+RIV++ KNNQ+HGLVEF + + + VA L LNG N+ C ++R+ FSKN GPL+V+++SD+ RDY+ +PL EL L P P+ + + + G ++ +TAQL+A+A Q+G+ LTPAA A AS MA +Q N QS G GS Q+ + G+ NG++V++V+NLN ++ PDALFTLFGVYGDV RVK+MFNKK+TAL+QF + QA+TA++ L+ LW K M + VS+ N++QLP ED +GLTKDY+NS LHRF+KPNSKN+QNI+PPS V+HLSNIPP+ +E D+ + G+EV F+F+ D KMAL++L +V+ AI LIE HN +L+E +HLRISFSK+
Sbjct: 37 NENKKSRIEY-VETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDL--SGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSMGINE--LTAQLAALAQQSGLALTPAAVAATASFMALTSQ-NSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGVRSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHNIVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFM-KDNKMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSKSAV 620
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A5K4ECD7 (Putative polypyrimidine tract binding protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 443.736 bits (1140), Expect = 9.187e-146 Identity = 246/591 (41.62%), Postives = 362/591 (61.25%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYS------------------------------FPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWG-------------------------------FGSNQSQNAMFNPNSGIE-----NGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
N +KK ++E ++ PS+V+HIRN+P + + +A+L +PFG ++N+V +K NQAL++M+ L AI M Y+ +Y + G++L +Q+SKHQ L+L + NS+I +Q+AN + L N+G + +LR+++DN INH + +KIF R+G+I+RIV++ KNNQ+HGLVEF + + + VA L LNG N+ C ++R+ FSKN GPL+V+++SD+ RDY+ +PL EL L P P+ + + + G ++ +TAQL+A+A Q+G+ LTPAA A AS MA +Q N QS G GS Q+ + G+ NG++V++V+NLN ++ PDALFTLFGVYGDV RVK+MFNKK+TAL+QF + QA+TA++ L+ LW K M + VS+ N++QLP ED +GLTKDY+NS LHRF+KPNSKN+QNI+PPS V+HLSNIPP+ +E D+ + G+EV F+F+ D KMAL++L +V+ AI LIE HN +L+E +HLRISFSK+
Sbjct: 28 NENKKSRIEY-VETVPSKVVHIRNMPDDATEHEIALLGIPFGLLENMVLSKKANQALLEMQCLESAIMMVSYYREYQVTLRGRNLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDL--SGANSGMPTTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYTGCCSLRVQFSKNRGPLEVRQESDRCRDYLNNPLTEEELMSLRRPTAGSERHHNSNPGHVSSNFQNSVVTNMAHQGIHLPVGMIAPPNTSSMGINE--LTAQLAALAQQSGLALTPAAVAATASFMALTSQ-NSGPGTQSMSGTPNLSTILAALQGGAVQTGVLPHMSGGNASVMGSVQTPVSSHVTPVGVRSPPNNNGSTVLIVSNLNEDRVYPDALFTLFGVYGDVTRVKIMFNKKDTALIQFNDPHQALTALQFLNGQRLWDKPMKIAVSRHNIVQLPKEDTENGLTKDYTNSLLHRFRKPNSKNFQNIYPPSHVLHLSNIPPSVTENDIRVLFATKGFEVTGFRFM-KDNKMALVQLETVDLAIQSLIELHNSQLTENSHLRISFSKSAV 611
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A5J4P405 (Polypyrimidine tract-binding protein 1 (Fragment) OS=Paragonimus westermani OX=34504 GN=DEA37_0012445 PE=4 SV=1) HSP 1 Score: 434.491 bits (1116), Expect = 4.529e-142 Identity = 249/590 (42.20%), Postives = 358/590 (60.68%), Query Frame = 3
Query: 120 KKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQL----------------------QLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELE---------GPQYSFPLFAVGRSMS-------------MARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSN-WGFGSNQSQNAMFNPNSGIEN------------------------GNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAG 1682
KK +M+ I PS V+H+RN+P +V++ +A+LA+PFG I N+V +KNNQ+LI+M L +AIE+ Y+ +Y L++GK++ +QFS H L+L + NS +D V++AN + L +G + +LRI+I+N INH++ YKIF RFG+I+R++ F + NQ+ ++EF + + + VA L LNG N+ C ++R++FS+ GPL+V+R++DK RDY SPL EL G FP +G+++S A + AQL+ +A Q+G+ L+PAAA A AS MA Q T S G + S A+ NP S I + G++V++V+N+N EK PDALFT+FGVYGDV RVK+MFNKK+TALVQFA+ QQA+TA+ ++ LWGK + + VS+ NV+Q+P ED + GLTKDY+NS LHRF+KPNSKN+QNI+PP+ V+HLSNIPP +E ++ + + GYEV FKF+ DK+MAL++L SV+ AI LIE HN +LSE +HLRISFSK G
Sbjct: 33 KKSRMDH-ITGLPSCVVHVRNMPSDVNENEIALLAIPFGIIKNMVLSKKNNQSLIEMEVLEDAIELVSYYEKYPVLLHGKNIILQFSTHTYLELTSENSLVDNAVKNANRIVQQDL--SGAQSGNPNSVLRIVIENIMGQQINHVILYKIFHRFGKILRVLIFLRQNQYQCMLEFQNHIQAFVAMLVSTRWYLCIASCCGCSVLCAFSHLNGQNIYTGCCSLRVEFSRTRGPLEVRRENDKCRDYTISPLMEEELNSPSSASATVNPMGTVGGFPGNVIGQNLSAVNPGANVSGLGTTAAAPGINELAAQLTLLAQQSGMALSPAAATATASFMALTAQGAAGTCLASPPSGAATLLSGAALGNPPSAIMSLPTQAQFLPAIQQTIPGLAQAANAGSTVLIVSNMNEEKVYPDALFTIFGVYGDVNRVKIMFNKKDTALVQFADAQQAVTALYFMNGQPLWGKPLKIAVSRFNVVQMPKEDTDVGLTKDYANSPLHRFRKPNSKNFQNIYPPNHVLHLSNIPPNITEEEIRSLFQSKGYEVSGFKFMQKDKRMALVQLGSVDLAIQALIELHNCQLSENSHLRISFSKMG 619
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp1b (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:103035814]) HSP 1 Score: 341.273 bits (874), Expect = 3.658e-110 Identity = 201/535 (37.57%), Postives = 297/535 (55.51%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL-INWANNTG--GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQE------LEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRVIH+R +P ++++ V L +PFG + N++ ++ NQA ++M A M Y++ P++ +F+Q+S H++L N N +Q+ N + + I + +G G S +LR++++N + V ++IFS+FG ++++++FTKNNQ L++FA L++ A+L L+G N+ C T+RI FSK L V+ +DK RDY L + Q + G ++ P + A F Q + + + GV A A A GF + + G+ V+LV+NLN E+ P LF LFGVYGDV+RVK+MFNKK ALVQ ++ QA A+ +L+ L+G+ + + +SK +QLP E + GLTKDYSNS LHRFKKP SKNY NIFPPS+ +HLSNIPP+ E DL + +G VK FKF D+KMAL+++ SVE+AI LIEFHN L E +HLR+SFSK+
Sbjct: 43 NDSKKFKGDIRSPGIPSRVIHVRKLPSDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMAIAGVDPSGVTGPSPVLRVIVENL-FYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFADGLTAQHAKLALDGQNIYNACCTLRISFSKLTS-LNVKYNNDKSRDYTRPDLPTGDSQPAIEHHAMAGAAFATPGIISAAPYAGAHAFPPAFAFQQAAGL-TMPGVP--------GALASLAIPGAAAAAAAAGRLGFPT-------------LSGGHCVMLVSNLNPERVTPQCLFILFGVYGDVIRVKIMFNKKENALVQMSDGTQAQLAMSHLNGQKLYGRALRITLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKMLFSTSGALVKNFKFFQKDRKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKS 553
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp1b (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:103035814]) HSP 1 Score: 340.887 bits (873), Expect = 6.416e-110 Identity = 201/535 (37.57%), Postives = 297/535 (55.51%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYL-INWANNTG--GASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQE------LEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRVIH+R +P ++++ V L +PFG + N++ ++ NQA ++M A M Y++ P++ +F+Q+S H++L N N +Q+ N + + I + +G G S +LR++++N + V ++IFS+FG ++++++FTKNNQ L++FA L++ A+L L+G N+ C T+RI FSK L V+ +DK RDY L + Q + G ++ P + A F Q + + + GV A A A GF + + G+ V+LV+NLN E+ P LF LFGVYGDV+RVK+MFNKK ALVQ ++ QA A+ +L+ L+G+ + + +SK +QLP E + GLTKDYSNS LHRFKKP SKNY NIFPPS+ +HLSNIPP+ E DL + +G VK FKF D+KMAL+++ SVE+AI LIEFHN L E +HLR+SFSK+
Sbjct: 54 NDSKKFKGDIRSPGIPSRVIHVRKLPSDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMAIAGVDPSGVTGPSPVLRVIVENL-FYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFADGLTAQHAKLALDGQNIYNACCTLRISFSKLTS-LNVKYNNDKSRDYTRPDLPTGDSQPAIEHHAMAGAAFATPGIISAAPYAGAHAFPPAFAFQQAAGL-TMPGVP--------GALASLAIPGAAAAAAAAGRLGFPT-------------LSGGHCVMLVSNLNPERVTPQCLFILFGVYGDVIRVKIMFNKKENALVQMSDGTQAQLAMSHLNGQKLYGRALRITLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKMLFSTSGALVKNFKFFQKDRKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKS 564
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 329.331 bits (843), Expect = 1.076e-105 Identity = 203/531 (38.23%), Postives = 312/531 (58.76%), Query Frame = 3
Query: 120 KKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNN-NSNIDKLVQSANEKRKHYLINWANNTGG-------ASEILRILIDNA--PNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDA-NHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
KK+++E +D PSRVIHIR +P EV +T V L +PFG + NI+ ++ NQA +++ A+ M +Y+ P + +FIQ+S H++L + N ++Q+ + ++ + +++T G S +LRI+IDN P + V +IFS+FG +++I++FTKNNQ L++F+ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R EL +G V SM+ A D S + S +G+ + ++A A S + A + ++ A + G + A+ SG G V+L +NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ QA A+ +L+ ++GK + + +SK +QLP E + GLTKD++NS LHRFKKP SKN+QNIFPPSA +HLSN+ +E DL + +G VK FKF D+KMALL++++VE+AI LI+ HN + + LR+SFSK+
Sbjct: 40 KKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGG--SPSSDTAGDSILSPAPSPVLRIIIDNMFYP---VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPELPAGDGQP------PVDPSMAAALSKDST------SLLGSPSGMVTSYSSAGAYPSSLGAISPLSAAAAAAAAAG------RVAL----SGHSGGGGVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFF-QDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKS 536
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp2a (polypyrimidine tract-binding protein 2 [Source:NCBI gene;Acc:103025597]) HSP 1 Score: 324.324 bits (830), Expect = 1.952e-104 Identity = 203/537 (37.80%), Postives = 301/537 (56.05%), Query Frame = 3
Query: 81 MDDFSQNSFDNSHKKVKMEQGI-DEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNA--PNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDAN-HGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
+ D + N D+ KK+++E + D PSRV+HIR +P EV +T V L +PFG + NI+ ++ NQA +++ AI M +Y++ P + +FIQ+S H++L N AN+ + T +S +LRI+IDN P + V +IFS+FG +++I++FTKNNQ L+++ S+ A++ L+G N+ C T+RID+SK L V+ +DK RDY R EL +G AV SM+ A D + LS +++ A R A + G NSG V+LV+NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ QA A+ +L+ ++ K + + +SK +QLP + + GLTKD++NS LHRFKKP SKN+QNIFPPSA +HLSNIP +E DL + +G VK FKF D+KMAL++L++VE+AI LI+ HN + + +HLR+SFSK+
Sbjct: 12 ISDGTSNGSDS--KKLRVEDRVGDAPPSRVLHIRKLPNEVSETEVIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTPHVRNVPVFIQYSNHKELKTDN-----------ANQSTPSSGSSDGTLTSPSSPVLRIIIDNMFYP---VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDAGSAQQAKVALDGQNIYNACCTLRIDYSKLVN-LNVKYNNDKSRDY-----TRPELPAGDGQP------AVDPSMAAAFSKDSNSLLGALSPLSAAA-----------------AAAAAAGRVALSGHSG-------------NSG------VLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADLNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFF-QDRKMALIQLSTVEEAIQCLIDLHNYNMGDNHHLRVSFSKS 483
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 325.094 bits (832), Expect = 2.184e-104 Identity = 197/531 (37.10%), Postives = 298/531 (56.12%), Query Frame = 3
Query: 120 KKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNN-NSNIDKLVQSANEKRKHYLINWANNTGG-------ASEILRILIDNA--PNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDA-NHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
KK+++E +D PSRVIHIR +P EV +T V L +PFG + NI+ ++ NQA +++ A+ M +Y+ P + +FIQ+S H++L + N ++Q+ + ++ + +++T G S +LRI+IDN P + V +IFS+FG +++I++FTKNNQ L++F+ +++ A+L L+G N+ C T+RIDFSK L V+ +DK RDY R EL +G V SM+ A D + +S +++ A R A SG G V+L +NLN E P +LFTLFGVYGDV RVK+++NKK++AL+Q A+ QA A+ +L+ ++GK + + +SK +QLP E + GLTKD++NS LHRFKKP SKN+QNIFPPSA +HLSN+ +E DL + +G VK FKF D+KMALL++++VE+AI LI+ HN + + LR+SFSK+
Sbjct: 40 KKLRVEDSMDSPPSRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGG--SPSSDTAGDSILSPAPSPVLRIIIDNMFYP---VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVN-LNVKYNNDKSRDY-----TRPELPAGDGQP------PVDPSMAAALSKDSTSLLGAISPLSAAA-----------------AAAAAAGRVA-------------------LSGHSGGGGVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFF-QDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKS 516
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008413.1 (pep scaffold:Pmarinus_7.0:GL478562:177533:180128:-1 gene:ENSPMAG00000007617.1 transcript:ENSPMAT00000008413.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 116.701 bits (291), Expect = 6.858e-31 Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 3
Query: 1290 LWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
++GK + + S+ +QLP D + LT D+S+S LHRF++ +KN+ +IFPPS +HLSNIP + E DL + G VK KF D KMAL+++ S+E+AI L E HN +L + LR+SFSK+
Sbjct: 30 MYGKPIRVTSSRYQTVQLP-RDGSDSLTCDFSDSPLHRFRRMGAKNFHHIFPPSVTLHLSNIPSSVLEDDLKTLFESNGCVVKALKFFATDHKMALVQMESLEEAIQTLAELHNHELEKNRLLRVSFSKS 158
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006507.1 (pep scaffold:Pmarinus_7.0:GL480554:3468:10153:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006507.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 118.242 bits (295), Expect = 3.948e-30 Identity = 74/255 (29.02%), Postives = 137/255 (53.73%), Query Frame = 3
Query: 147 DEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLI-------NWANNTGGASEILRILIDNAPNLI--INHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLF-AVGRSMSM 881
DE PS+V+HIR +P+ + V LA+PFG + NI+ ++ +QA ++M A+ +++ P++ + +++Q+S ++ L N+ + +K + ++ N+ S IL I+++ NL+ I V + +FS++G +++I+ F KN+Q+ L++FA ++H A+ L+G N+ C T+R+ FS+ L V+ ++K RD L R +L EG Q FPL A G+ S+
Sbjct: 22 DELPSKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVE---NLLYPITLEVLHHVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAKTMLDGQNIYNGCCTLRVGFSRLTN-LNVKYNNEKSRD-----LTRPDLPAGEG-QGPFPLMRAQGKETSL 266
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 116.701 bits (291), Expect = 1.996e-28 Identity = 117/468 (25.00%), Postives = 184/468 (39.32%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSK--NPGPLQVQRQSDKVRDYMESPLNRTELQELEGP------QYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNS----------GIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVI----QLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSE 1493
PS V+HIR + D++ V FG + ++V + QAL++ L +A + G+ + FS Q++ + A++ + IL + ++NA I V + I S +G + RIV F KN L F S S+ A+ LNGA++ C T++I+++K P L V R + DY LEGP Q P +G S RG Q T C Q S FG+ + M P + G N V++V N+N N LF L +YG+V ++K + +K ++Q A+ A+ NL+ L+G+++ L VSK I +ED + +D+ S +RF + I PPSA++H + PP SE
Sbjct: 10 PSPVVHIRGLASSADESQVMEALQEFGTVRHVVMMPHRRQALVEFERLEDARACVAGTAGDPVYVGGQPAYCNFSTSQRISRKGGTP--------------------ADDVARTNHILLLTVNNALYPITTE-VIHTICSPYGVVQRIVIFKKNGVQ-ALRTFDSIPSAQQAKSSLNGADIYSGCCTLKIEYAKERKPARLNVYRNDSETWDYT-----------LEGPCVPNGQQKKQPAL-LGDHPSTMRGYGNQQGT---------------------------YCPQNYSFNNYTSGSPFGNARPTTPMSGPGTCAPHNNPCPMGGSAANRVMMVYNMNPSVMNCSRLFNLVCLYGNVEKIKFLKSKPGVGMIQMADAASVDRAVANLNTAQLFGQKLSLSVSKQQEIVAGQAFELEDGSDSF-RDFVGSRHNRFSTHEQASKNRILPPSAILHFYSAPPEFSE 415
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006509.1 (pep scaffold:Pmarinus_7.0:GL480554:3489:6552:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006509.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 90.1225 bits (222), Expect = 6.432e-21 Identity = 49/185 (26.49%), Postives = 101/185 (54.59%), Query Frame = 3
Query: 147 DEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLI-------NWANNTGGASEILRILIDNAPNLI--INHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQ 674
DE PS+V+HIR +P+ + V LA+PFG + NI+ ++ +QA ++M A+ +++ P++ + +++Q+S ++ L N+ + +K + ++ N+ S IL I+++ NL+ I V + +FS++G +++I+ F KN+Q+ L++FA ++H A+
Sbjct: 15 DELPSKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVE---NLLYPITLEVLHHVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAK 196
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 63.929 bits (154), Expect = 4.946e-11 Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 3
Query: 1098 GNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVI------QLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIP-PTTSE--GDLSDMIRIA-GYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKN-----HLRISFSKA 1679
GN V++V +AE+ N D +F + ++G+V +VK + +K A+V+ + A+ +L+ ++GK+++L VSK I +LP D + KD++ S +RF I P+ V+H N P T+E L D + IA K F + L+E + DA+ L ++ L N L++ FS A
Sbjct: 313 GNKVLMVYGFDAERINCDRVFNILCLFGNVEKVKFLKSKPGAAMVEMGDPYAVDRAVSHLNMSQIFGKKINLCVSKQQSIVPGQAYELP--DGTNSY-KDFTGSRNNRFANAEKAAKNRIQQPTTVLHFFNAPMDITAEIFMQLCDEMSIARPLSFKAFSGKSDKSMSGLMEWENKNDAMEALACINHHSLKNANGPYPYTLKLCFSTA 518
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO43995 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXA3]) HSP 1 Score: 220.32 bits (560), Expect = 2.351e-65 Identity = 108/194 (55.67%), Postives = 142/194 (73.20%), Query Frame = 3
Query: 1098 GNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
G+ +VLV+NLN E + DALFTLFG YGDV RVK++FNKK+TALVQFAN QA TAI +L+ ++GK+M + SK + LP E + LTKDY NS LHRFKKP SKN+QNIFPPS +HLSNIP + +E +L+ M G +V F+FLP D+KMA L + + E+AI LI+ HN K+SE +HLR+SF+++
Sbjct: 276 GSPLVLVSNLNEEMISCDALFTLFGCYGDVQRVKILFNKKDTALVQFANVHQAQTAIGHLNGVRVFGKEMKVTNSKHTSVSLPKEGEDTNLTKDYMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCG-DVADFRFLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFARS 468 HSP 2 Score: 124.405 bits (311), Expect = 1.535e-30 Identity = 72/227 (31.72%), Postives = 123/227 (54.19%), Query Frame = 3
Query: 159 SRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLI-NWANNTGGASE-------ILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTE 815
S+V+H+RNV E D + L +P+G + N++ ++ NQA ++M+ A+ + + ++ P + G+ ++IQ+S HQ+L N S V+ + I + + G A E ILRI+++N I V +IF+++G +++IV FT+NNQ LV+F+ + + A+ L+G N+ C T+RID+SK L V+ +DK RDY L E
Sbjct: 2 SKVLHLRNVAAEATDAEIIALGIPYGRVTNVLMLKGKNQAFLEMKTKENAMALMNSYSYIPPSIRGRQIYIQYSNHQELT--TNESQHSPGVRGLSSSHLGAGIGSLTSGLGIAGELPSVNGCILRIIVENMLYPITIE-VLNQIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYNGCCTLRIDYSKLK-TLSVKYNNDKTRDYTRPDLPSGE 224
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO26232 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TCJ0]) HSP 1 Score: 142.895 bits (359), Expect = 2.046e-40 Identity = 70/140 (50.00%), Postives = 97/140 (69.29%), Query Frame = 3
Query: 1263 AIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAG 1682
AI +L+ ++GK+M + SK + LP E + LTKDY NS LHRFKKP SKN+QNIFPPS +HLSNIP + +E +L+ M G +V F+FLP D+KMA L + + E+AI LI+ HN K+SE +HLR+SF+++
Sbjct: 1 AIGHLNGVRVFGKEMKVTNSKHTSVSLPKEGEDTNLTKDYMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCG-DVADFRFLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFARSS 139
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO35537 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLA1]) HSP 1 Score: 91.6633 bits (226), Expect = 2.580e-21 Identity = 71/213 (33.33%), Postives = 102/213 (47.89%), Query Frame = 3
Query: 156 PSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPL-MYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGG-ASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDY 788
PSRVIH R V +T + + PFG I + + K QAL++ L AI + Y +Q PL + G+ +F+ +SK Q++ KR L +N AS IL + I N P IN + +KI S G+++RIV F KN GL LS+ A LNG ++ C T++ID+SK L V + D+ DY
Sbjct: 5 PSRVIHCRAVADGCKETDLIQVLQPFGTITYVTLLPKIRQALVEFESLESAIAVVTY-SQTSPLTVLGRQMFVNYSKSQEI------------------KRDKVLNGDSNGACAEASNILLLTIIN-PLHPINVKILHKICSPSGKVLRIVIFHKN----GL----QALSAERALAVLNGQDIYAGCCTLKIDYSKKAKKLNVFKNDDETWDY 189
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO39119 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAW4]) HSP 1 Score: 80.4925 bits (197), Expect = 5.513e-16 Identity = 53/204 (25.98%), Postives = 93/204 (45.59%), Query Frame = 3
Query: 1038 GFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLP-----MEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGY----EVKKFKFLPNDKKMA-LLELNSVEDAIHVLI 1619
G+G+ Q +G +V++V L+ +K N D LF L YG+V+++K + K TA+ + H T + NL L+ +Q+ SK + + P + D + K + NS +RF + + +F P V+H N P +E + +M ++ G +K F N + + L+E SV A+ L+
Sbjct: 282 GYGAQPMQAPQMQTYRNHPSGGNVIMVYGLDKDKMNCDRLFNLLCCYGNVIKIKFLLGKPGTAMAELHEHVACNTVMENLSKMTLFDQQLEFSFSKQDYLVEPANVPNLPDGSPSF-KSFDNSKNNRFTSATASSKNRVFTPMKVLHFFNAPVDCTEEQIREMCQVCGVAPPKTIKMFSPSGNARTSSGLIEWESVTQALEALV 484 HSP 2 Score: 65.4698 bits (158), Expect = 3.025e-11 Identity = 54/217 (24.88%), Postives = 96/217 (44.24%), Query Frame = 3
Query: 153 KPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVP-LMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVE--FASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYME 794
+PSRV+H+R V E + + +G I I + K QAL++ E+ A + + P ++ G+ + +SK +Q+ RN + V+S + K LI N P ++ + + IFS+ G + RIV F K+ + E F ++ A+ LNGA++ C T++I+ L V++ + DY +
Sbjct: 45 EPSRVVHVRGVADEAREQDLMQCLSQYGNISCITMMPKIRQALVEFEEIACANTLVNQTQMGNPVILCGRPAYANYSKSKQIS-RNVH------VRSETQPNKILLITIIN----------------PQYVVTTDILHTIFSKQGMVQRIVIFRKSGLQAMVEESRFDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYTQ 238
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO35536 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLA0]) HSP 1 Score: 62.3882 bits (150), Expect = 3.781e-11 Identity = 51/185 (27.57%), Postives = 89/185 (48.11%), Query Frame = 3
Query: 1107 VVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSK-------TNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIF---PPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVK---KFKFLPNDKKMA-LLELNSVEDAIHVLI 1619
+++V LN EK N + +F LF +YG+V++VK + NK +VQ ++ + IRNL ++ ++++ SK + V LP + +++++ +RFK N ++ PP+ ++H N PP + L D+ AG F N K A LLE+ + A+ LI
Sbjct: 1 MLMVYGLNHEKMNCERIFNLFCLYGNVIKVKFLTNKPGACMVQMSDKIASEMIIRNLSGATIFDNKINIMFSKHPFIADSSVVTALPDSSPS---AMNFADNRNNRFKYDNMPFLDSVVGYQPPTRMLHFFNAPPNCTVDQLRDVSTKAGALAPLKGTFFSKANTKSSAGLLEMPDIRSAMEALI 182
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000042697.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 335.109 bits (858), Expect = 1.980e-108 Identity = 203/527 (38.52%), Postives = 290/527 (55.03%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLI--INHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGR-SMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRV+HIR +P ++ +T V L +PFG + N++ ++ NQA ++M A M Y++ +P++ + +F+QFS H+ +L+ +NS + Q+A ++ A S +LR++++N L+ ++ +IFS+FG ++RI+ FTKNNQ L+++A S+ A++ L+G N+ C T+RI FSK L V+ +DK RD+ L + Q Q F G S S G F A S LT + + GF I G+SVVLV+NLNAE+ P LF LFGVYGDVMRVK++FNKK ALVQ ++ QA A+ +L+ L G+ + + +SK +QLP E + GLTKDYS+S LHRFKKP SKNY NIFPPSA +HLSNIPP+ E DL + +G VK FKF D KMAL+++ SVE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 8 NDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHK--ELKTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVEN---LLYPVSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTT-LNVKYNNDKSRDFTRPDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAFPPAFALQPVSSPYAGLT--------MSGLPGTLASLTLPAGARLGF-------------PAIPAGHSVVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPREGHEDQGLTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSFSKS 507
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000036879.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 335.109 bits (858), Expect = 9.513e-108 Identity = 203/527 (38.52%), Postives = 292/527 (55.41%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLI--INHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGR-SMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRV+HIR +P ++ +T V L +PFG + N++ ++ NQA ++M A M Y++ +P++ + +F+QFS H++L + +NS + Q+A ++ A S +LR++++N L+ ++ +IFS+FG ++RI+ FTKNNQ L+++A S+ A++ L+G N+ C T+RI FSK L V+ +DK RD+ L + Q Q F G S S G F A S LT + + + + GF I G+SVVLV+NLNAE+ P LF LFGVYGDVMRVK++FNKK ALVQ ++ QA A+ +L+ L G+ + + +SK +QLP E + GLTKDYS+S LHRFKKP SKNY NIFPPSA +HLSNIPP+ E DL + +G VK FKF D KMAL+++ SVE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 61 NDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKEL--KTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVEN---LLYPVSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTT-LNVKYNNDKSRDFTRPDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAFPPAFALQPVSSPYAGLTMSGLPGTLASLTL--------PAGARLGF-------------PAIPAGHSVVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPREGHEDQGLTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSFSKS 560
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ptbp1 (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:101165926]) HSP 1 Score: 330.102 bits (845), Expect = 3.224e-106 Identity = 203/538 (37.73%), Postives = 300/538 (55.76%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWA-----NNTGGA---SEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQF---MTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRV+H+R +P ++++ V L +PFG + N++ ++ NQA ++ A M Y++ P++ +++Q+S H++L N N +Q+ N + + A + GGA S +LR++++N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A+L L+G N+ C T+RI FSK L V+ +DK RDY L + Q L+ + F G + G F T Q + ++ Q G+ A ASL + M A + G + G G++V+LV+NLN E P LF LFGVYGDVMRVK++FNKK ALVQ ++ QA ++ +L+ L G+ + + +SK +QLP E + GLTKDYSNS LHRFKKP SKNY NIFPPSA +HLSNIPP+ E DL + G VK FKF D+KMAL+++ SVE+AI LIEFHN L E +HLR+SFSK+
Sbjct: 7 NDSKKFKGDVRSPGVPSRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEFGSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGSGMGSMAISAEAASMGGAASQSPVLRVIVENL-FYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKLSLDGQNIYNACCTLRISFSKLTS-LNVKYNNDKSRDYTRPDLPTADSQPSLDHQAMAAAAFGPGIISASPYGGAHAFPPTFTFQQAGLSMQ-GIP------SALASLGVGHSGMAAAAAAAAATRLGLS---------GLGATGGHNVLLVSNLNPESVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLSMSHLNGQRLHGRAIRVTLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLRRLFASTGATVKAFKFFQKDRKMALIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKS 526
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ptbp1 (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:101165926]) HSP 1 Score: 330.487 bits (846), Expect = 1.013e-105 Identity = 203/538 (37.73%), Postives = 300/538 (55.76%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRN--NNSNIDKLVQSANEKRKHYLINWA-----NNTGGA---SEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQ-ELEGPQYSFPLFAVGRSMSMARGNDQQF---MTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRV+H+R +P ++++ V L +PFG + N++ ++ NQA ++ A M Y++ P++ +++Q+S H++L N N +Q+ N + + A + GGA S +LR++++N + V ++IFS+FG +++I++FTKNNQ L+++A +++ A+L L+G N+ C T+RI FSK L V+ +DK RDY L + Q L+ + F G + G F T Q + ++ Q G+ A ASL + M A + G + G G++V+LV+NLN E P LF LFGVYGDVMRVK++FNKK ALVQ ++ QA ++ +L+ L G+ + + +SK +QLP E + GLTKDYSNS LHRFKKP SKNY NIFPPSA +HLSNIPP+ E DL + G VK FKF D+KMAL+++ SVE+AI LIEFHN L E +HLR+SFSK+
Sbjct: 56 NDSKKFKGDVRSPGVPSRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEFGSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGSGMGSMAISAEAASMGGAASQSPVLRVIVENL-FYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKLSLDGQNIYNACCTLRISFSKLTS-LNVKYNNDKSRDYTRPDLPTADSQPSLDHQAMAAAAFGPGIISASPYGGAHAFPPTFTFQQAGLSMQ-GIP------SALASLGVGHSGMAAAAAAAAATRLGLS---------GLGATGGHNVLLVSNLNPESVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLSMSHLNGQRLHGRAIRVTLSKHTTVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLRRLFASTGATVKAFKFFQKDRKMALIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKS 575
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000017576.2 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 316.62 bits (810), Expect = 7.945e-101 Identity = 198/548 (36.13%), Postives = 290/548 (52.92%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLI--INHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQEL--------------------EGPQYSFP-LFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALF-TLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMED-ANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K + PSRV+HIR +P ++ +T V L +PFG + N++ ++ NQA ++M A M Y++ +P++ + +F+QFS H++L + +NS + Q+A ++ A S +LR++++N L+ ++ +IFS+FG ++RI+ FTKNNQ L+++A S+ A++ L+G N+ C T+RI FSK L V+ +DK RD+ L + Q G ++FP FA+ S G + L+++ G L GF I G+SVVLV+NLNAE F T + VYGDVMRVK++FNKK ALVQ ++ QA A+ +L+ L G+ + + +SK +QLP E + GLTKDYS+S LHRFKKP SKNY NIFPPSA +HLSNIPP+ E DL + +G VK FKF D KMAL+++ SVE+AI LI+ HN L E +HLR+SFSK+
Sbjct: 37 NDSKKFKGDLRGPNVPSRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKEL--KTDNSPNQERAQAALRALSSSHVDTAALVVAPSSVLRVVVEN---LLYPVSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTT-LNVKYNNDKSRDFTRPDLPSGDGQPTMEHQAMATAFGPGIISASPYTGATHAFPPAFALQPVSSPYAGLTMSGLPGTLASLTLPAGARL----------------------------GF-------------PAIPAGHSVVLVSNLNAECGTIMKRFLTCWCVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPREGHEDQGLTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSFSKS 537
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0 Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 3
Query: 3 MASFNMAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
MASFNMAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA
Sbjct: 1 MASFNMAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 561
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 1132.47 bits (2928), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 3
Query: 18 MAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
MAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA
Sbjct: 1 MAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 556
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 1082.4 bits (2798), Expect = 0.000e+0 Identity = 535/538 (99.44%), Postives = 535/538 (99.44%), Query Frame = 3
Query: 81 MDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFM---TAQLSAMASQTGVELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 1685
MDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFM TAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA
Sbjct: 1 MDDFSQNSFDNSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMSNITAQLSAMASQTGVELTPAAAMAAASLMAACNQMNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHGLTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKAGA 538
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000033951.1 (SMESG000033951.1) HSP 1 Score: 362.459 bits (929), Expect = 2.225e-117 Identity = 207/541 (38.26%), Postives = 313/541 (57.86%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSAN---EKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGV------ELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFN------PNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPM--EDANHGL-TKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K+E + +PS+V+HIRN+ ++ +++LAVPFG I ++V+ +K NQAL+++ + +EA M DY+ +Y P G+ + +Q+SKH L+L+ NSNID V +AN EK + + W++ ILR++I+N N INHLV K+F RFG+++RI+ FTKN Q LVE +++S+HV+ L LNG +L DC ++I+FSKN LQ+QRQ+DK RDY SPL E Q+S F ++ S++ QQ+ + + QT V + P + S+ + N ++ P+S +S++LV+NLN EK N D++FTLFGVYGDV +V + ALV + QA TA R+L+ L+GK + ++ ++ + + N + K ++N+ LHRFKKPNSKN+ NI+PPS+V+HLSNIP + E DL + G++ + DKKMAL ++ S+EDAI LI HN KL++ +HLR+SFSKA
Sbjct: 107 NESKKSKLEPSTNTEPSKVLHIRNIASRAQESDLSLLAVPFGKIRSMVYAKKTNQALLELEKASEATRMFDYYTRYPPCFNGREMIVQYSKHVSLELKLKNSNIDASVDAANKMNEKHRSIVDEWSSENKSDRRILRVVIENLKNYNINHLVILKVFQRFGKVLRIIIFTKNMQCQCLVELDNSISAHVSLLHLNGQDLFNDCCRLKIEFSKNTDSLQIQRQNDKCRDYTVSPLQEDE-------QFSL-HFLDWQAKSVSTVPPQQYPSLSTVPLL-QTQVQKPLYSDFLPNNLFYTVMPNVFKSTFQPSPVAIPESLLISDCAINPLYQEPIVKPPSSANAIDSSIILVSNLNYEKVNTDSIFTLFGVYGDVSKVCISPPSVGAALVYMQTNSQAETACRHLNLVPLFGKIISTYLLPGEIVAQSIFNTELNSDIEVKHFTNTPLHRFKKPNSKNHFNIYPPSSVLHLSNIPLSFKEEDLLTLFHDNGFQCSSLRIFQKDKKMALAKMTSLEDAISALISLHNWKLTDSSHLRVSFSKA 638
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000033951.1 (SMESG000033951.1) HSP 1 Score: 362.073 bits (928), Expect = 2.762e-117 Identity = 207/541 (38.26%), Postives = 313/541 (57.86%), Query Frame = 3
Query: 111 NSHKKVKMEQGIDEKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSAN---EKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEGPQYSFPLFAVGRSMSMARGNDQQFMTAQLSAMASQTGV------ELTPXXXXXXXXXXXXCNQMNHRTADQSNWGFGSNQSQNAMFN------PNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPM--EDANHGL-TKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFLPNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 1679
N KK K+E + +PS+V+HIRN+ ++ +++LAVPFG I ++V+ +K NQAL+++ + +EA M DY+ +Y P G+ + +Q+SKH L+L+ NSNID V +AN EK + + W++ ILR++I+N N INHLV K+F RFG+++RI+ FTKN Q LVE +++S+HV+ L LNG +L DC ++I+FSKN LQ+QRQ+DK RDY SPL E Q+S F ++ S++ QQ+ + + QT V + P + S+ + N ++ P+S +S++LV+NLN EK N D++FTLFGVYGDV +V + ALV + QA TA R+L+ L+GK + ++ ++ + + N + K ++N+ LHRFKKPNSKN+ NI+PPS+V+HLSNIP + E DL + G++ + DKKMAL ++ S+EDAI LI HN KL++ +HLR+SFSKA
Sbjct: 109 NESKKSKLEPSTNTEPSKVLHIRNIASRAQESDLSLLAVPFGKIRSMVYAKKTNQALLELEKASEATRMFDYYTRYPPCFNGREMIVQYSKHVSLELKLKNSNIDASVDAANKMNEKHRSIVDEWSSENKSDRRILRVVIENLKNYNINHLVILKVFQRFGKVLRIIIFTKNMQCQCLVELDNSISAHVSLLHLNGQDLFNDCCRLKIEFSKNTDSLQIQRQNDKCRDYTVSPLQEDE-------QFSL-HFLDWQAKSVSTVPPQQYPSLSTVPLL-QTQVQKPLYSDFLPNNLFYTVMPNVFKSTFQPSPVAIPESLLISDCAINPLYQEPIVKPPSSANAIDSSIILVSNLNYEKVNTDSIFTLFGVYGDVSKVCISPPSVGAALVYMQTNSQAETACRHLNLVPLFGKIISTYLLPGEIVAQSIFNTELNSDIEVKHFTNTPLHRFKKPNSKNHFNIYPPSSVLHLSNIPLSFKEEDLLTLFHDNGFQCSSLRIFQKDKKMALAKMTSLEDAISALISLHNWKLTDSSHLRVSFSKA 640 The following BLAST results are available for this feature:
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30023057 ID=SMED30023057|Name=Polypyrimidine tract-binding protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1738bpback to top protein sequence of SMED30023057-orf-1 >SMED30023057-orf-1 ID=SMED30023057-orf-1|Name=SMED30023057-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=563bp MASFNMAANGNAGINRKRREHEYSYQMDDFSQNSFDNSHKKVKMEQGIDEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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