Regulator of microtubule dynamics protein 1

Overview


Name	Regulator of microtubule dynamics protein 1
Smed ID	SMED30022956
Length (bp)	879

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Regulator of microtubule dynamics protein 1 (SMED30022956) t-SNE clustered cells

Violin plots show distribution of expression levels for Regulator of microtubule dynamics protein 1 (SMED30022956) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Regulator of microtubule dynamics protein 1 (SMED30022956) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30022956

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 15

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
gut	SMED30022956	h1SMcG0018207	Contig2191	GPL15192	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30022956	h1SMcG0018207	Contig2191	GPL15192	PMID:23079596 Forsthoefel et al., 2012
Smed sexual biotype	SMED30022956	h1SMcG0018207	Contig38713	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30022956	h1SMcG0018207	Contig38713	newmark_ests	PMID:29674431 Fincher et al., 2018
nervous system	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchyma	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30022956	h1SMcG0018207	dd_Smed_v4_502_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
intestinal phagocyte	SMED30022956	h1SMcG0018207	dd_Smed_v6_502_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
parenchymal cell	SMED30022956	h1SMcG0018207	dd_Smed_v6_502_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
glial cell	SMED30022956	h1SMcG0018207	dd_Smed_v6_502_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Match: RMDN1 (regulator of microtubule dynamics 1 [Source:HGNC Symbol;Acc:HGNC:24285])

HSP 1 Score: 139.428 bits (350), Expect = 1.428e-38
Identity = 88/211 (41.71%), Postives = 130/211 (61.61%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:   85 EILEQADYLYESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPA 291

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Match: RMDN1 (regulator of microtubule dynamics 1 [Source:HGNC Symbol;Acc:HGNC:24285])

HSP 1 Score: 114.775 bits (286), Expect = 6.388e-30
Identity = 82/211 (38.86%), Postives = 120/211 (56.87%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+             GKTY KL NK  A  +L K  DY  
Sbjct:   41 EILEQADYLYESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ-------------GKTYLKLHNKKLAAFWLMKAKDYPA 234

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Match: RMDN1 (regulator of microtubule dynamics 1 [Source:HGNC Symbol;Acc:HGNC:24285])

HSP 1 Score: 105.145 bits (261), Expect = 2.715e-27
Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 2

Query:  302 DESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:    3 NESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPA 137

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Match: RMDN1 (regulator of microtubule dynamics 1 [Source:HGNC Symbol;Acc:HGNC:24285])

HSP 1 Score: 101.679 bits (252), Expect = 3.061e-25
Identity = 69/173 (39.88%), Postives = 105/173 (60.69%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEK 595
            EI+ + D L+   + ++L QL  T+Y   E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+
Sbjct:   31 EILEQADYLYESGETEKLYQLL-TQYK--ESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ 199

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Match: RMDN1 (regulator of microtubule dynamics 1 [Source:HGNC Symbol;Acc:HGNC:24285])

HSP 1 Score: 98.5969 bits (244), Expect = 1.349e-23
Identity = 76/211 (36.02%), Postives = 112/211 (53.08%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +K                K IE                N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:   85 EILEQADYLYESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHK----------------KAIE---------------LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPA 261

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
Match: F33H2.6 (pep chromosome:WBcel235:I:15014851:15016595:-1 gene:WBGene00009369.1 transcript:F33H2.6.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F33H2.6)

HSP 1 Score: 122.865 bits (307), Expect = 6.505e-33
Identity = 75/167 (44.91%), Postives = 103/167 (61.68%), Query Frame = 2

Query:  179 AELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESN--VGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEA 673
            +ELLWR AR + E    + D+ + K L+ +A  + K  L N+  N   G +KWY ILLD  G IEG K RIE SF+V+KHL+ A     ++D    H LGVW F  + + +  R +A   FATPP ST++EAL +   AE+I+PGFY++N  YIG+ YE+L  K EA
Sbjct:   97 SELLWRLARVVCEKGKLSKDQNQRKELILEAYGIVKKALDNEPKNGCFGAHKWYAILLDYVGEIEGNKSRIEKSFQVRKHLEKA-LSIFENDPTTWHILGVWHFSFANMGYATRMVAKAIFATPPASTYQEALHYFLKAEQISPGFYSTNTYYIGEVYEQLGQKAEA 262

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
Match: rmd-6 (Regulator of Microtubule Dynamics [Source:UniProtKB/TrEMBL;Acc:Q966G0])

HSP 1 Score: 75.8702 bits (185), Expect = 3.901e-16
Identity = 62/203 (30.54%), Postives = 109/203 (53.69%), Query Frame = 2

Query:   92 ELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLD 700
            E+D  F  K+  +   L + + +  + ++ E+LWR A+ + E  +    KA+ K  + + L  A+  +  D ++    KW  +L          K+++E S + K+ LD A  K  K D  +LH  G + + V++L+W+ +KLAATF+  PP+ ++EEA E   +A K+NP  +  N  Y+ K Y  +K+K+ A+ YL +  D
Sbjct:    5 EIDKTFGTKNRDQGYDLLKARLDKGD-RSVEVLWRLAQVIHE-KSACVPKAQRKASVTEGLKFAEEAVQKDPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKALAKEPK-DTALLHLRGRYKYSVASLTWLEKKLAATFYQQPPSHSYEEANEDFLAAYKVNPK-WMENTFYVSKCYVAIKDKNNARKYLTEVCD 203

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
Match: rmd-3 (Regulator of Microtubule Dynamics [Source:UniProtKB/TrEMBL;Acc:Q17510])

HSP 1 Score: 74.7146 bits (182), Expect = 1.124e-15
Identity = 62/203 (30.54%), Postives = 107/203 (52.71%), Query Frame = 2

Query:   92 ELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLD 700
            E+D  F  K+  +   L + + +  + ++ E+LWR A+ + E  +    KA+ K  + + L  A+  +  D ++    KW  +L          K+++E S + K+ LD    K  K D  VLH  G + + V++L+W+ +KLAATF+  PP+ ++EEA E   +A K+NP  +  N  Y+ K Y  +K+K  A+ YL +  D
Sbjct:    5 EIDKTFGTKNRDQGYDLLKARLDKGD-RSVEVLWRLAQVIHE-KSACVPKAQRKASVTEGLKFAEEAVQKDPNHFKALKWNAVLTGQATEYMATKEKLECSKKFKELLDKTLAKEPK-DTAVLHLRGRYKYSVASLTWLEKKLAATFYQQPPSHSYEEANEDFLAAYKVNPK-WMENTFYVSKCYVAIKDKANARKYLTEVCD 203

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
Match: rmd-2 (Regulator of Microtubule Dynamics [Source:UniProtKB/TrEMBL;Acc:B2D6P1])

HSP 1 Score: 73.1738 bits (178), Expect = 3.568e-15
Identity = 61/208 (29.33%), Postives = 102/208 (49.04%), Query Frame = 2

Query:   92 ELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTD 715
            +LD LF     +E     + +Y+  E ++ ++LWR A+   E+ N   +K + K ++ +    A      D +N    +W  ++        G K++IE     K++LD A     K D  +LH  G W   V+ LSW  RK AA  ++ PPT+T EEA+    +A +INP  +  N +Y+GK   +  +K  AK + ++ L    T+
Sbjct:    5 DLDALFGTDRVQEGYDALKKRYDAGE-KSIDVLWRLAKFCNEIGNRV-EKDKRKDIIVEGKKYATEAWNTDSNNFLAARWAALMSGKVTEYLGTKEKIEEGKHCKEYLDRAISIQPKED-ALLHLRGRWALSVANLSWFERKAAALLYSEPPTATVEEAIADFQAAHEINPD-WIENTVYLGKALHQKGDKAAAKPFFEQALKITPTN 208

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Query:   92 ELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTD 715
            +LD LF     +E     + +Y+  E ++ ++LWR A+   E+ N   +K + K ++ +    A      D +N    +W  ++        G K++IE     K++LD A     K D  +LH  G W   V+ LSW  RK AA  ++ PPT+T EEA+    +A +INP  +  N +Y+GK   +  +K  AK + ++ L    T+
Sbjct:    5 DLDALFGTDRVQEGYDALKKRYDAGE-KSIDVLWRLAKFCNEIGNRV-EKDKRKDIIVEGKKYATEAWNTDSNNFLAARWAALMSGKVTEYLGTKEKIEEGKHCKEYLDRAISIQPKED-ALLHLRGRWALSVANLSWFERKAAALLYSEPPTATVEEAIADFQAAHEINPD-WIENTVYLGKALHQKGDKAAAKPFFEQALKITPTN 208

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Zebrafish
Match: rmdn1 (regulator of microtubule dynamics 1 [Source:ZFIN;Acc:ZDB-GENE-070928-17])

HSP 1 Score: 134.42 bits (337), Expect = 4.805e-37
Identity = 83/214 (38.79%), Postives = 126/214 (58.88%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGT 712
            S+ EI+ + D L++  + ++L QL +   ++ +   AE LWR AR  R+LA  ++ + E +RL  +A   A + L  DE     +KW+ I L   G  EGIK +I NS+ +++HL+ A +  N  D   +H LG WCF  + L W  RK+AA  F +PPT+T+EEALE    AE++ P FY+ NLL +GKTY  L++  +A ++L K  DY   
Sbjct:   67 SAEEILEQADYLYSCGETQKLHQLLDKHRDSGD---AEFLWRLARVCRDLALLSSAE-EKRRLTYEAFQYATAALQRDEQCYAAHKWFAICLSDVGDYEGIKVKIGNSYIIREHLERAIQ-LNPRDATSIHILGFWCFAFAELPWYQRKVAAVIFGSPPTATYEEALEFFLRAEEVEPSFYSKNLLMLGKTYMMLRDVQQAALWLTKARDYPAV 275

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Zebrafish
Match: rmdn3 (regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256])

HSP 1 Score: 97.4413 bits (241), Expect = 1.899e-22
Identity = 63/174 (36.21%), Postives = 103/174 (59.20%), Query Frame = 2

Query:  179 AELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLD 700
            AE +WR ARA  ++   T ++ E K   ++    A++ L  +  +  C+KW+ IL   + + + I  ++++   +K+HLD A    +  D    + LG WC EVS+LSW+ +K AATF+ T PTS+  EALE+   AE++NPGF  +  LYI K +++L N  EA+ ++Q  L+
Sbjct:  269 AEFMWRLARAYSDMCETTENREEKKNYAEQGNYEAEAALTRNGLSADCHKWFAILAHQSSQYDSIHGKLKSGHILKEHLDRALALCDD-DPICFYLLGRWCLEVSSLSWLEKKAAATFYETSPTSSLNEALENFLKAEELNPGFSKTVRLYIAKCHKELGNLSEARNWVQLALN 441

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Zebrafish
Match: rmdn3 (regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256])

HSP 1 Score: 97.0561 bits (240), Expect = 2.441e-22
Identity = 63/174 (36.21%), Postives = 103/174 (59.20%), Query Frame = 2

Query:  179 AELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLD 700
            AE +WR ARA  ++   T ++ E K   ++    A++ L  +  +  C+KW+ IL   + + + I  ++++   +K+HLD A    +  D    + LG WC EVS+LSW+ +K AATF+ T PTS+  EALE+   AE++NPGF  +  LYI K +++L N  EA+ ++Q  L+
Sbjct:  269 AEFMWRLARAYSDMCETTENREEKKNYAEQGNYEAEAALTRNGLSADCHKWFAILARQSSQYDSIHGKLKSGHILKEHLDRALALCDD-DPICFYLLGRWCLEVSSLSWLEKKAAATFYETSPTSSLNEALENFLKAEELNPGFSKTVRLYIAKCHKELGNLSEARNWVQLALN 441

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Match: crhr2 (corticotropin releasing hormone receptor 2 [Source:Xenbase;Acc:XB-GENE-990953])

HSP 1 Score: 137.887 bits (346), Expect = 1.557e-38
Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 2

Query:   92 ELDDLFAKKDF----KELCQLFETKYNTEEYQTAELLWRHARALRELA-NNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            ++DD+  + D+     E  +L+E     ++   AELLWR ARA R++A  +TT + E KRL+ ++   AK  L  +E     +KWY I L   G  EGIK +I N++ VK+HL+ A E  N  D   +H +GVWC+  + L W   K+A+  F TPP++TFEEALE+   AE+++P FY+ NLL++GKTY KLKNK  A  +L K  D+  
Sbjct:   36 KVDDIIEQADYLYGSGETAKLYELLSQYKDSNDAELLWRLARAARDVALVSTTPQDEKKRLIYESFDSAKKALELNELCWAAHKWYSICLSNVGDYEGIKTKIGNAYIVKEHLERAKE-LNPKDATTIHIIGVWCYMFADLPWYQVKIASALFGTPPSATFEEALEYFLQAEEVDPNFYSKNLLFLGKTYLKLKNKSLALDWLTKAKDFPA 245

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Match: crhr2 (corticotropin releasing hormone receptor 2 [Source:Xenbase;Acc:XB-GENE-990953])

HSP 1 Score: 138.272 bits (347), Expect = 2.377e-38
Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 2

Query:   92 ELDDLFAKKDF----KELCQLFETKYNTEEYQTAELLWRHARALRELA-NNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            ++DD+  + D+     E  +L+E     ++   AELLWR ARA R++A  +TT + E KRL+ ++   AK  L  +E     +KWY I L   G  EGIK +I N++ VK+HL+ A E  N  D   +H +GVWC+  + L W   K+A+  F TPP++TFEEALE+   AE+++P FY+ NLL++GKTY KLKNK  A  +L K  D+  
Sbjct:   76 KVDDIIEQADYLYGSGETAKLYELLSQYKDSNDAELLWRLARAARDVALVSTTPQDEKKRLIYESFDSAKKALELNELCWAAHKWYSICLSNVGDYEGIKTKIGNAYIVKEHLERAKE-LNPKDATTIHIIGVWCYMFADLPWYQVKIASALFGTPPSATFEEALEYFLQAEEVDPNFYSKNLLFLGKTYLKLKNKSLALDWLTKAKDFPA 285

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Match: crhr2 (corticotropin releasing hormone receptor 2 [Source:Xenbase;Acc:XB-GENE-990953])

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-32
Identity = 85/218 (38.99%), Postives = 125/218 (57.34%), Query Frame = 2

Query:   92 ELDDLFAKKDF----KELCQLFETKYNTEEYQTAELLWRHARALRELA-NNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHL-------TSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            ++DD+  + D+     E  +L+E     ++   AELLWR ARA R++A  +TT + E KRL+ ++   AK  L  +E     +KWY I L   G  EGIK +I N++ VK+HL+ A E  N  D   +H +GVWC+  + L W   K+A+  F TPP++TFEE +  +        S+ K +P FY+ NLL++GKTY KLKNK  A  +L K  D+  
Sbjct:   76 KVDDIIEQADYLYGSGETAKLYELLSQYKDSNDAELLWRLARAARDVALVSTTPQDEKKRLIYESFDSAKKALELNELCWAAHKWYSICLSNVGDYEGIKTKIGNAYIVKEHLERAKE-LNPKDATTIHIIGVWCYMFADLPWYQVKIASALFGTPPSATFEEVILLVRFLQNTKRSSSKFDPNFYSKNLLFLGKTYLKLKNKSLALDWLTKAKDFPA 292

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Match: sult5a1 (sulfotransferase family 5A, member 1 [Source:Xenbase;Acc:XB-GENE-5871003])

HSP 1 Score: 93.5893 bits (231), Expect = 5.198e-21
Identity = 60/170 (35.29%), Postives = 90/170 (52.94%), Query Frame = 2

Query:  182 ELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIA-NEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQ 688
            E LWR AR+  ++     D  E K         A++ L   + N  C+KW+ IL       EGI+KRI+  +  K+H++ A + K   + C  L  LG WC+EVS L W+ RK A+  +  PPT+T  EAL++   AE + PGF  +  + I K Y+ L N+  A  +L+
Sbjct:  261 EFLWRLARSYSDMCTTVEDAQEKKSYASDGKEEAEAALQKADQNAECHKWFAILCGQLSEHEGIQKRIQTGYLFKEHIEKAISLKPGDARCYYL--LGRWCYEVSNLGWLERKTASALYENPPTATVHEALQNFLKAEDLTPGFSKAARILIAKCYKDLGNEATAAHWLK 428

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Match: sult5a1 (sulfotransferase family 5A, member 1 [Source:Xenbase;Acc:XB-GENE-5871003])

HSP 1 Score: 93.5893 bits (231), Expect = 6.085e-21
Identity = 60/170 (35.29%), Postives = 90/170 (52.94%), Query Frame = 2

Query:  182 ELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIA-NEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQ 688
            E LWR AR+  ++     D  E K         A++ L   + N  C+KW+ IL       EGI+KRI+  +  K+H++ A + K   + C  L  LG WC+EVS L W+ RK A+  +  PPT+T  EAL++   AE + PGF  +  + I K Y+ L N+  A  +L+
Sbjct:  261 EFLWRLARSYSDMCTTVEDAQEKKSYASDGKEEAEAALQKADQNAECHKWFAILCGQLSEHEGIQKRIQTGYLFKEHIEKAISLKPGDARCYYL--LGRWCYEVSNLGWLERKTASALYENPPTATVHEALQNFLKAEDLTPGFSKAARILIAKCYKDLGNEATAAHWLK 428

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
Match: Rmdn1 (regulator of microtubule dynamics 1 [Source:MGI Symbol;Acc:MGI:1913552])

HSP 1 Score: 132.494 bits (332), Expect = 3.477e-36
Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL       +E +  ELLWR ARA R++A  + T + E K L+ +AL  AK  L   ES+   +KWY I +   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FA PP+ST+EEAL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K   Y  
Sbjct:   80 EILAQADYLYESGETEKLYQLL---IQYKESEDGELLWRLARASRDIAQLSKTSEEEKKVLVYEALDYAKRALEKKESSSAAHKWYAICISDVGDYEGIKVKIANAYVIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKVLFANPPSSTYEEALRYFHKAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKAKGYPA 286

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
Match: Rmdn3 (regulator of microtubule dynamics 3 [Source:MGI Symbol;Acc:MGI:1915059])

HSP 1 Score: 93.2041 bits (230), Expect = 5.633e-21
Identity = 62/207 (29.95%), Postives = 111/207 (53.62%), Query Frame = 2

Query:   83 IITELDDLF--AKKDFKELCQLF---ETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQ 688
            ++ + D+L   +K+D +E  QL    +  Y + +    + LWR ARA  ++++ T +++  K         A++ L   + +  C+ WY +L       EGI KRI++ F  K+H+D A E   +   G    LG WC++VS L+W+ +K A   F +P ++T ++AL+    AE++ PGF  +  +YI K Y +L    EA+ +++
Sbjct:  242 VLLQADELHQGSKQDKREGFQLLLNNKLAYGSRQ----DFLWRLARAYSDMSDLTEEESGKKSYALNGKEEAEAALKKGDESAACHLWYAVLCGQLAEHEGISKRIQSGFSFKEHVDKAIELQPEDPRGHFL-LGRWCYQVSHLNWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARKWMK 443

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
Match: Rmdn2 (regulator of microtubule dynamics 2 [Source:MGI Symbol;Acc:MGI:2147043])

HSP 1 Score: 83.1889 bits (204), Expect = 1.208e-17
Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = 2

Query:  179 AELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSL-GVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEA 673
             E LWR ARA  ++ + +T   E K       ++ +  +     N  C+ WY +L       EG++ +I      KKHL+IA +   +    +L+ L G +C+ VS LSWI +K+AAT F   P ST  EAL +    E++ PG+  SN +Y  K Y +L    EA
Sbjct:  214 TEFLWRLARAYGDMYDLSTSTQEKKHYANIGKTLGERAITRAPMNGHCHLWYAVLCGYVSEFEGLQNKINCGHLFKKHLEIAIQLLPEEP--LLYYLKGRYCYTVSRLSWIEKKMAATLFGEIPYSTVHEALHNFLKTEELQPGYSMSNYMYTAKCYVELGEPQEA 377

[Close]

Query:  179 AELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSL-GVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEA 673
             E LWR ARA  ++ + +T   E K       ++ +  +     N  C+ WY +L       EG++ +I      KKHL+IA +   +    +L+ L G +C+ VS LSWI +K+AAT F   P ST  EAL +    E++ PG+  SN +Y  K Y +L    EA
Sbjct:  214 TEFLWRLARAYGDMYDLSTSTQEKKHYANIGKTLGERAITRAPMNGHCHLWYAVLCGYVSEFEGLQNKINCGHLFKKHLEIAIQLLPEEP--LLYYLKGRYCYTVSRLSWIEKKMAATLFGEIPYSTVHEALHNFLKTEELQPGYSMSNYMYTAKCYVELGEPQEA 377

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
Match: Rmdn1 (regulator of microtubule dynamics 1 [Source:MGI Symbol;Acc:MGI:1913552])

HSP 1 Score: 70.0922 bits (170), Expect = 5.905e-14
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDI 421
            EI+ + D L+   + ++L QL       +E +  ELLWR ARA R++A  + T + E K L+ +AL  AK  L   ES+   +KWY I +   G  EGIK +I N++ +K+H ++
Sbjct:   80 EILAQADYLYESGETEKLYQLL---IQYKESEDGELLWRLARASRDIAQLSKTSEEEKKVLVYEALDYAKRALEKKESSSAAHKWYAICISDVGDYEGIKVKIANAYVIKEHFEV 191

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Match: sp|Q32KL4|RMD1_BOVIN (Regulator of microtubule dynamics protein 1 OS=Bos taurus OX=9913 GN=RMDN1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.187e-38
Identity = 88/216 (40.74%), Postives = 131/216 (60.65%), Query Frame = 2

Query:   65 IMSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            +    E++ + D L+   + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I +   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+ V+ + W  R++A   FATPP ST+EEAL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:   83 VFEIEEVLEQADYLYESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSGTSEEEKKFLVYEALEYAKRALEKNESSCAAHKWYAICIGDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTVAEMPWYQRRIAKVLFATPPGSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLTKAKDYPA 294

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Match: sp|Q96DB5|RMD1_HUMAN (Regulator of microtubule dynamics protein 1 OS=Homo sapiens OX=9606 GN=RMDN1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.857e-38
Identity = 88/211 (41.71%), Postives = 130/211 (61.61%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:   85 EILEQADYLYESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPA 291

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Match: sp|Q5R8E4|RMD1_PONAB (Regulator of microtubule dynamics protein 1 OS=Pongo abelii OX=9601 GN=RMDN1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.973e-37
Identity = 88/211 (41.71%), Postives = 129/211 (61.14%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L    + ++L QL  T+Y  +E + AELLWR ARA R++A  + T + E K L+ +AL  AK  L  +ES+   +KWY I L   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FATPP+ST+E+AL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K  DY  
Sbjct:   85 EILEQADYLCESGETEKLYQLL-TQY--KESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALSYFHRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPA 291

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Match: sp|Q9DCV4|RMD1_MOUSE (Regulator of microtubule dynamics protein 1 OS=Mus musculus OX=10090 GN=Rmdn1 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.432e-35
Identity = 83/211 (39.34%), Postives = 123/211 (58.29%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL       +E +  ELLWR ARA R++A  + T + E K L+ +AL  AK  L   ES+   +KWY I +   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FA PP+ST+EEAL +   AE+++P FY+ NLL +GKTY KL NK  A  +L K   Y  
Sbjct:   80 EILAQADYLYESGETEKLYQLL---IQYKESEDGELLWRLARASRDIAQLSKTSEEEKKVLVYEALDYAKRALEKKESSSAAHKWYAICISDVGDYEGIKVKIANAYVIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAKVLFANPPSSTYEEALRYFHKAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKAKGYPA 286

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Match: sp|Q4G069|RMD1_RAT (Regulator of microtubule dynamics protein 1 OS=Rattus norvegicus OX=10116 GN=Rmdn1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.455e-35
Identity = 85/211 (40.28%), Postives = 125/211 (59.24%), Query Frame = 2

Query:   80 EIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            EI+ + D L+   + ++L QL  T+Y  +E +  ELLWR ARA R++A    T + E K LL +AL  AK  L    S+   +KWY I +   G  EGIK +I N++ +K+H + A E  N  D   +H +G+WC+  + + W  R++A   FA PP+ST+EEAL++   AE+++P FY+ NLL +GKTY KL NK  A  +L K   Y  
Sbjct:   85 EILEQADYLYESGETEKLYQLL-TQY--KESEDVELLWRLARASRDIAQLCKTSEEEKKVLLYEALEYAKRALEKKGSSFAAHKWYAICISDVGDYEGIKVKIANAYVIKEHFEKAIE-LNPKDATSIHLMGIWCYTFAEMPWYQRRIAEVLFANPPSSTYEEALKYFHRAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKAKSYPA 291

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Match: A0A1I8G7Y4 (TPR_REGION domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 6.175e-49
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKR-LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDY--DGTD 715
            +S++I+T +D+L +    KE     + +      ++AE+ WR AR  R LAN   D  E ++ L+ +A   AK GL  +  N  C+KW GILLDLTGR EG KKRIENSF VK+H   A +K    D  VLH LGVWC+EV+ LSW+ R +AA FFA PPTST+EEALE+L  AEK +P FYASNL YIGK Y +LK   EAK + QK +++  DG D
Sbjct:    5 TSSDILTAVDELHSAGKEKEARDQLKAELAAGR-ESAEIYWRLARECRGLANRCPDSEEQRKALIYEAFESAKKGLAAEPDNWSCHKWMGILLDLTGRFEGTKKRIENSFLVKEHFTKALDK-KPDDAVVLHCLGVWCYEVANLSWLQRNMAAAFFAKPPTSTYEEALEYLLRAEKASPNFYASNLNYIGKAYYQLKKLPEAKEFFQKTINHEADGHD 220

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Match: A0A1I8J620 (TPR_REGION domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 6.206e-49
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKR-LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDY--DGTD 715
            +S++I+T +D+L +    KE     + +      ++AE+ WR AR  R LAN   D  E ++ L+ +A   AK GL  +  N  C+KW GILLDLTGR EG KKRIENSF VK+H   A +K    D  VLH LGVWC+EV+ LSW+ R +AA FFA PPTST+EEALE+L  AEK +P FYASNL YIGK Y +LK   EAK + QK +++  DG D
Sbjct:    5 TSSDILTAVDELHSAGKEKEARDQLKAELAAGR-ESAEIYWRLARECRGLANRCPDSEEQRKALIYEAFESAKKGLAAEPDNWSCHKWMGILLDLTGRFEGTKKRIENSFLVKEHFTKALDK-KPDDAVVLHCLGVWCYEVANLSWLQRNMAAAFFAKPPTSTYEEALEYLLRAEKASPNFYASNLNYIGKAYYQLKKLPEAKEFFQKTINHEADGHD 220

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Match: A0A267EG72 (TPR_REGION domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig007364g1 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 6.296e-49
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKR-LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDY--DGTD 715
            +S++I+T +D+L +    KE     + +      ++AE+ WR AR  R LAN   D  E ++ L+ +A   AK GL  +  N  C+KW GILLDLTGR EG KKRIENSF VK+H   A +K    D  VLH LGVWC+EV+ LSW+ R +AA FFA PPTST+EEALE+L  AEK +P FYASNL YIGK Y +LK   EAK + QK +++  DG D
Sbjct:   11 TSSDILTAVDELHSAGKEKEARDQLKAELAAGR-ESAEIYWRLARECRGLANRCPDSEEQRKALIYEAFESAKKGLAAEPDNWSCHKWMGILLDLTGRFEGTKKRIENSFLVKEHFTKALDK-KPDDAVVLHCLGVWCYEVANLSWLQRNMAAAFFAKPPTSTYEEALEYLLRAEKASPNFYASNLNYIGKAYYQLKKLPEAKEFFQKTINHEADGHD 226

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Match: A0A267G635 (TPR_REGION domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig023913g2 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 6.523e-49
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKR-LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDY--DGTD 715
            +S++I+T +D+L +    KE     + +      ++AE+ WR AR  R LAN   D  E ++ L+ +A   AK GL  +  N  C+KW GILLDLTGR EG KKRIENSF VK+H   A +K    D  VLH LGVWC+EV+ LSW+ R +AA FFA PPTST+EEALE+L  AEK +P FYASNL YIGK Y +LK   EAK + QK +++  DG D
Sbjct:   10 TSSDILTAVDELHSAGKEKEARDQLKAELAAGR-ESAEIYWRLARECRGLANRCPDSEEQRKALIYEAFESAKKGLAAEPDNWSCHKWMGILLDLTGRFEGTKKRIENSFLVKEHFTKALDK-KPDDAVVLHCLGVWCYEVANLSWLQRNMAAAFFAKPPTSTYEEALEYLLRAEKASPNFYASNLNYIGKAYYQLKKLPEAKEFFQKTINHEADGHD 225

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Match: A0A267EID1 (TPR_REGION domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig023913g1 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 7.099e-49
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 2

Query:   71 SSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKR-LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDY--DGTD 715
            +S++I+T +D+L +    KE     + +      ++AE+ WR AR  R LAN   D  E ++ L+ +A   AK GL  +  N  C+KW GILLDLTGR EG KKRIENSF VK+H   A +K    D  VLH LGVWC+EV+ LSW+ R +AA FFA PPTST+EEALE+L  AEK +P FYASNL YIGK Y +LK   EAK + QK +++  DG D
Sbjct:   14 TSSDILTAVDELHSAGKEKEARDQLKAELAAGR-ESAEIYWRLARECRGLANRCPDSEEQRKALIYEAFESAKKGLAAEPDNWSCHKWMGILLDLTGRFEGTKKRIENSFLVKEHFTKALDK-KPDDAVVLHCLGVWCYEVANLSWLQRNMAAAFFAKPPTSTYEEALEYLLRAEKASPNFYASNLNYIGKAYYQLKKLPEAKEFFQKTINHEADGHD 229

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Match: rmdn1 (regulator of microtubule dynamics 1 [Source:NCBI gene;Acc:103039863])

HSP 1 Score: 135.191 bits (339), Expect = 1.379e-37
Identity = 88/215 (40.93%), Postives = 128/215 (59.53%), Query Frame = 2

Query:   74 SNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELA---NNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            ++E+I   D L++  + ++L QL     ++++   AE LWR ARA R+LA   N   D  + K+L  +A   AK  L  +E+    +KWY I L   G  EG+K +I NS+ +K HL+ A E  N  D   +H LG WCF  + L W  RK+AA  FA+PPT+T+EEAL +   AE ++P FY+ NLL +GKTY  LK++D+A ++L K  DY  
Sbjct:   51 ADEVIERADYLYSCGETEKLYQLLLQYKDSDD---AEFLWRLARASRDLALVPNVAAD--QKKQLTYEAFDYAKKALEKNEACFAAHKWYAICLSDVGDYEGVKVKIGNSYIIKDHLERAIE-LNPKDATSIHILGYWCFAFAELPWYQRKVAAVIFASPPTATYEEALAYFLKAEDVDPNFYSKNLLMLGKTYMMLKDQDKALLWLHKARDYPA 259

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Match: rmdn1 (regulator of microtubule dynamics 1 [Source:NCBI gene;Acc:103039863])

HSP 1 Score: 135.191 bits (339), Expect = 2.055e-37
Identity = 88/215 (40.93%), Postives = 128/215 (59.53%), Query Frame = 2

Query:   74 SNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELA---NNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            ++E+I   D L++  + ++L QL     ++++   AE LWR ARA R+LA   N   D  + K+L  +A   AK  L  +E+    +KWY I L   G  EG+K +I NS+ +K HL+ A E  N  D   +H LG WCF  + L W  RK+AA  FA+PPT+T+EEAL +   AE ++P FY+ NLL +GKTY  LK++D+A ++L K  DY  
Sbjct:   73 ADEVIERADYLYSCGETEKLYQLLLQYKDSDD---AEFLWRLARASRDLALVPNVAAD--QKKQLTYEAFDYAKKALEKNEACFAAHKWYAICLSDVGDYEGVKVKIGNSYIIKDHLERAIE-LNPKDATSIHILGYWCFAFAELPWYQRKVAAVIFASPPTATYEEALAYFLKAEDVDPNFYSKNLLMLGKTYMMLKDQDKALLWLHKARDYPA 281

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Match: rmdn3 (regulator of microtubule dynamics protein 3 [Source:NCBI gene;Acc:103042020])

HSP 1 Score: 98.2117 bits (243), Expect = 6.646e-23
Identity = 62/175 (35.43%), Postives = 101/175 (57.71%), Query Frame = 2

Query:  176 TAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIA-NEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCL 697
            + E LWR ARA  ++  +  D+ E +   ++    A++ L ++  N  C+KW+ +L   + + E +  ++++S  +K+HLD A + + +   C  L  LG WCFEVS LSW+ +K AA  F T P S   +ALE+   AE++NPGF  +  LYI K +++L N  EA+ + Q  L
Sbjct:  235 SVEFLWRLARAYNDMCEHVADQEEKRSYAEQGRDEAEAALQHNGLNAECHKWFAVLTGQSSQYESMHGKLKSSHILKEHLDRALSLRDDDPLCYYL--LGRWCFEVSRLSWVEKKTAAALFETLPDSCLNDALENFLKAEELNPGFSKNVRLYIAKCHKELGNYSEARNWAQLAL 407

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Match: rmdn3 (regulator of microtubule dynamics protein 3 [Source:NCBI gene;Acc:103042020])

HSP 1 Score: 97.4413 bits (241), Expect = 1.877e-22
Identity = 62/175 (35.43%), Postives = 101/175 (57.71%), Query Frame = 2

Query:  176 TAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIA-NEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCL 697
            + E LWR ARA  ++  +  D+ E +   ++    A++ L ++  N  C+KW+ +L   + + E +  ++++S  +K+HLD A + + +   C  L  LG WCFEVS LSW+ +K AA  F T P S   +ALE+   AE++NPGF  +  LYI K +++L N  EA+ + Q  L
Sbjct:  279 SVEFLWRLARAYNDMCEHVADQEEKRSYAEQGRDEAEAALQHNGLNAECHKWFAVLTGQSSQYESMHGKLKSSHILKEHLDRALSLRDDDPLCYYL--LGRWCFEVSRLSWVEKKTAAALFETLPDSCLNDALENFLKAEELNPGFSKNVRLYIAKCHKELGNYSEARNWAQLAL 451

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Match: ENSAMXT00000050699.1 (regulator of microtubule dynamics protein 2 [Source:NCBI gene;Acc:103037124])

HSP 1 Score: 83.1889 bits (204), Expect = 3.046e-18
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 2

Query:  164 EEY-QTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAK 676
            EE+ Q  + LWR  RA  +  +   D  E K+  +K   V    +  +      ++WY I+  L    E ++ +I+N +  K HLD A E     D    + LG WC+ V+  +WI RK+AAT F  PP++T ++AL++   AE++ P +   N +++ K Y+ L  K +AK
Sbjct:   72 EEFEQKCQYLWRLTRAYADAHDLAGDSQEKKKFAEKGKQVGAQAISVNPMCAESHQWYAIVCGLLSEYESVQNKIKNGYLFKDHLDKAIE-LKPQDPLSYYLLGRWCYAVAQCTWIERKIAATLFGEPPSATMQDALQNFLKAEELCPKYSKFNYVFLAKCYKDLGQKTQAK 242

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003862.1 (pep scaffold:Pmarinus_7.0:GL489646:3760:6869:-1 gene:ENSPMAG00000003521.1 transcript:ENSPMAT00000003862.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 129.028 bits (323), Expect = 8.826e-37
Identity = 75/183 (40.98%), Postives = 110/183 (60.11%), Query Frame = 2

Query:  182 ELLWRHARALRELANNT-TDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG-TDVDT 724
            E+LWR ARA R+LA  + T   E +RL  +AL  AK  L  + S+  C+KWY I +   G  EGIK +I N+F +K+H   A E  N  D   LH +G+WCF  + + W  R++ A  FA+PP++TF +AL++ + AE++ P FY+ N+L +GKT  +L N   A ++L K  D+   TD D 
Sbjct:    4 EVLWRLARAARDLAQRSGTTTEERRRLAYEALDAAKRALDKNPSSFACHKWYAICVSDVGDFEGIKVKIANAFVIKEHFQKAIE-LNPRDPTSLHLMGLWCFTFAEMPWYQRRITAVLFASPPSATFYDALQYFSEAEQVEPSFYSKNMLMLGKTQLRLGNVRGALLWLTKARDFPARTDEDA 185

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Sea Lamprey
Match: rmdn3 (regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256])

HSP 1 Score: 90.5077 bits (223), Expect = 6.102e-21
Identity = 58/162 (35.80%), Postives = 88/162 (54.32%), Query Frame = 2

Query:  176 TAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKN 661
            +AE LWR  R   +L   TTD  + K        VA   +  +E +  C++WY ++       E  + RI+N F  K+H+D A E  N SD    + LG WC+ VS L+WI RK+AAT FA  P +T ++AL +    E++ P F  +N ++I K Y++L +
Sbjct:  211 SAEFLWRLVRGYSDLFEMTTDTEQKKIYAYAGKEVAVESIKVNEQSSNCHQWYAVMCGFLADYETTQNRIKNGFLFKEHIDRAIE-LNPSDPLNYYLLGRWCYGVSQLTWIERKVAATLFAITPMATIQDALANFLKTEELKPKFSKANQVFIAKCYDQLGD 371

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009395.1 (pep scaffold:Pmarinus_7.0:GL478442:15946:21596:1 gene:ENSPMAG00000008488.1 transcript:ENSPMAT00000009395.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 81.2629 bits (199), Expect = 1.896e-18
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 2

Query:  191 WRHARALRELANNTTDKAENKRLLQKALS---VAKSGLVNDESNVGCNKWYGIL-LDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDE 670
            WR ARA  ++   T DK+E  RL+  AL+    A+ GL        C KW+ I+ LD    ++  + ++ NSF VK+HL+  N   N SD  +LH LG W F ++ L+WI R++  + F   PTS+  EAL++   AE++ P F  +N ++I K    L  ++E
Sbjct:   51 WRMARAFGDMCEITEDKSE--RLIH-ALTGKESAEKGLKWRSCIRECRKWFAIICLDYLWELQTTQHQMRNSFSVKRHLE-QNLATNPSDPEMLHLLGRWGFAMANLTWIERRVCNSIFKDYPTSSVNEALQYFLKAEELQPNFSKANQVFIVKCCASLGLQEE 210

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BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
Match: EDO33467 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SS47])

HSP 1 Score: 123.25 bits (308), Expect = 3.377e-34
Identity = 75/199 (37.69%), Postives = 112/199 (56.28%), Query Frame = 2

Query:   98 DDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKC 694
            D+LF   D   + +L+E     +E   A  +WR ARA R  A    D  E K+   +AL  AK  +  D+ +  C+KWY I +   G  EG K +I+N++ ++ H   A +  N +D    H LG+WCF  + + W   KLAA  F+TPP+ST++EAL H   AE + P F++ N L +GKTY +LK  ++AK +L+K 
Sbjct:    5 DELF---DNNAIDELYEVLIKFKESDKAGTMWRLARAARNKAERAKDGNEKKKFTYEALEYAKKSVELDDRDFACHKWYAITVSNVGDFEGTKTKIQNAYTIRDHFQKAVD-LNPTDATSRHLLGLWCFTFADMPWYQHKLAAAIFSTPPSSTYDEALNHFEMAESLQPNFFSKNHLMLGKTYARLKKLEKAKFWLEKA 199

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
Match: EDO34531 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SP21])

HSP 1 Score: 110.153 bits (274), Expect = 4.256e-29
Identity = 68/186 (36.56%), Postives = 105/186 (56.45%), Query Frame = 2

Query:  167 EYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGI-LLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVW-----CFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYD 706
            E +  E+LWR +RA R +A+ T D AE +  +      A  G+  D++N GC+KW+ + L+   G   G +++++N   VK+H   A +  N +D    H LG W      F +S L W+ RK+  T  + PP +T+EEALE    AEK+ P F+  N L + KT+ +LKN  +AK +LQK +D+ 
Sbjct:   33 ETKEPEVLWRLSRASRVVADRTPDAAEKQTYVNMIKEFASRGMEIDDNNSGCHKWFAMGLMQAAG---GPQEKMKNVHIVKEHFQKAID-LNPNDPHAHHVLGTWYVTMMFFNLSDLPWLMRKMLNTIQSNPPKATYEEALEQFEEAEKLQPNFFGRNSLLLAKTHMRLKNLPKAKEFLQKAVDFP 214

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
Match: EDO32079 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW51])

HSP 1 Score: 90.1225 bits (222), Expect = 1.395e-20
Identity = 66/179 (36.87%), Postives = 93/179 (51.96%), Query Frame = 2

Query:  179 AELLWRHARALRELAN-NTTDKAENKR--LLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYD 706
            AEL WR ARA  +L+      + E K+  LL K L+ A+  +  ++     +KW  I+L  T   E  + +I   F+ K+H+  A E  N  D    H LG WC+EVS LSW  RK A    A PP ST EEAL++   AE + PGF+ SN  +I   Y +     ++K ++ K L  D
Sbjct:  187 AELWWRLARAYSDLSPIKAKQEGEEKKKDLLYKGLAAAQKAVELNDKLSNAHKWCSIMLGSTTEYESTQDQILQGFKYKEHIVKAIE-LNHKDPTCYHLLGRWCYEVSQLSWWKRKAATAIAAEPPASTVEEALDNFLKAEALQPGFWLSNTYWIAMCYYQQSAYSKSKEWVTKALAMD 364

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
Match: EDO28338 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T6R7])

HSP 1 Score: 52.373 bits (124), Expect = 6.120e-9
Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 2

Query:  167 EYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGI-LLDLTGRIEGIKKRIENSFEVKKHL 415
            E +  E+LWR +RA R +A+ TTD  E +  +      A  G+  D+ N GC+KW+ + L+   G   G +++++N   VK+H 
Sbjct:   33 ETKEPEVLWRLSRASRVVADRTTDSTEKQTYVNMIKEFASRGIEIDDKNSGCHKWFAMGLMQAAG---GPQEKMKNVHIVKEHF 113

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Match: rmdn1 (regulator of microtubule dynamics 1 [Source:NCBI gene;Acc:101164760])

HSP 1 Score: 134.806 bits (338), Expect = 3.205e-37
Identity = 86/215 (40.00%), Postives = 125/215 (58.14%), Query Frame = 2

Query:   68 MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            +  +EI+ + D L++  + ++L +L     +++E   AE LWR ARA REL+    TD     +L  +A    K  L  D++N   +KWY I L   G  +G+K +I NSF +++HL+ A +  N  D   LH LG WCF  + L W  RK+AA  F +PPTSTFEEALE    AE+++P FY+ NLL +GKTY  +K+   A ++L K  DY  
Sbjct:   77 LEKDEILEQADYLYSCAETEKLYELLVKYKDSDE---AEFLWRLARASRELSFLPDTDPQRKTQLTSEAFEFVKRALERDDTNFAVHKWYAICLSDIGESQGVKAKIGNSFIIREHLEKAIQ-LNPKDPTSLHILGYWCFAFAELPWYQRKVAAVIFESPPTSTFEEALEFFLKAEEVDPNFYSKNLLMLGKTYMAMKDDQNALLWLTKAKDYPA 287

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Match: rmdn1 (regulator of microtubule dynamics 1 [Source:NCBI gene;Acc:101164760])

HSP 1 Score: 134.806 bits (338), Expect = 4.607e-37
Identity = 86/215 (40.00%), Postives = 125/215 (58.14%), Query Frame = 2

Query:   68 MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELAN-NTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDG 709
            +  +EI+ + D L++  + ++L +L     +++E   AE LWR ARA REL+    TD     +L  +A    K  L  D++N   +KWY I L   G  +G+K +I NSF +++HL+ A +  N  D   LH LG WCF  + L W  RK+AA  F +PPTSTFEEALE    AE+++P FY+ NLL +GKTY  +K+   A ++L K  DY  
Sbjct:   77 LEKDEILEQADYLYSCAETEKLYELLVKYKDSDE---AEFLWRLARASRELSFLPDTDPQRKTQLTSEAFEFVKRALERDDTNFAVHKWYAICLSDIGESQGVKAKIGNSFIIREHLEKAIQ-LNPKDPTSLHILGYWCFAFAELPWYQRKVAAVIFESPPTSTFEEALEFFLKAEEVDPNFYSKNLLMLGKTYMAMKDDQNALLWLTKAKDYPA 287

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Match: rmdn3 (regulator of microtubule dynamics protein 3 [Source:NCBI gene;Acc:101162569])

HSP 1 Score: 87.4261 bits (215), Expect = 5.001e-19
Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 2

Query:  161 TEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIA-NEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEA 673
             E   + E LWR ARA  ++     DK E     QK    A++ L  +  N  C+KW  +L  L+   +    ++++ F +K+HLD A   + +   C  L  LG WCFEV++L W+ +K AA  + + PTS+  +ALE+   AE+++PGF     LYI   ++KL N  EA
Sbjct:  284 AEHGHSREFLWRLARAYVDVYFAAQDKQERMSYAQKGRDEAEAALKRNGLNAECHKWLAVLSSLSAEHDSTHSKLKSGFLLKEHLDRALRLRDDDPVCYFL--LGRWCFEVASLDWLEKKAAAALYRSAPTSSLHDALENFLKAEELSPGFSRMVRLYIAMCHKKLGNISEA 453

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Match: ENSORLT00000041136.1 (regulator of microtubule dynamics protein 2 [Source:NCBI gene;Acc:105355721])

HSP 1 Score: 73.559 bits (179), Expect = 8.183e-15
Identity = 57/211 (27.01%), Postives = 102/211 (48.34%), Query Frame = 2

Query:   77 NEIITELDDLFAKKDFKELCQL-FETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYD 706
            N ++ E+D L    +F +   L    K   E  Q +  LWR  RA  ++ + ++   E K   +    V +  +  +      ++W+ I+  +    + ++ +I+N +  K HLD A E     D    + LG WC+ V+ LSWI RK AA  F  PP++T E+AL++    E+I+P +   N +++ K Y+ L   ++A+   +     D
Sbjct:   34 NVLLKEVDRLHEGTEFDKRESLNILLKQEAEFGQDSRFLWRLTRAYCDVHDISSTLEEKKTHAETGKRVGEEAVTLNPLCAESHQWFAIMCGIMTEYDTVQNKIKNGYIFKDHLDKAIE-LKPQDPLSYYLLGRWCYSVAQLSWIERKAAAALFGEPPSATVEDALKNFLKVEEIHPAYSKFNYVFLAKCYKDLGKINKARTMCEAAYSMD 243

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Match: ENSORLT00000033047.1 (regulator of microtubule dynamics protein 2 [Source:NCBI gene;Acc:105355721])

HSP 1 Score: 73.9442 bits (180), Expect = 8.806e-15
Identity = 57/211 (27.01%), Postives = 102/211 (48.34%), Query Frame = 2

Query:   77 NEIITELDDLFAKKDFKELCQL-FETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYD 706
            N ++ E+D L    +F +   L    K   E  Q +  LWR  RA  ++ + ++   E K   +    V +  +  +      ++W+ I+  +    + ++ +I+N +  K HLD A E     D    + LG WC+ V+ LSWI RK AA  F  PP++T E+AL++    E+I+P +   N +++ K Y+ L   ++A+   +     D
Sbjct:   34 NVLLKEVDRLHEGTEFDKRESLNILLKQEAEFGQDSRFLWRLTRAYCDVHDISSTLEEKKTHAETGKRVGEEAVTLNPLCAESHQWFAIMCGIMTEYDTVQNKIKNGYIFKDHLDKAIE-LKPQDPLSYYLLGRWCYSVAQLSWIERKAAAALFGEPPSATVEDALKNFLKVEEIHPAYSKFNYVFLAKCYKDLGKINKARTMCEAAYSMD 243

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Match: SMESG000038855.1 (SMESG000038855.1)

HSP 1 Score: 420.239 bits (1079), Expect = 3.271e-150
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 2

Query:   68 MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVDTMN 730
            MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNT DKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLAATFFATPPTSTFEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVDTMN
Sbjct:    1 MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTADKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLAATFFATPPTSTFEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVDTMN 221

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Match: SMESG000038799.1 (SMESG000038799.1)

HSP 1 Score: 267.7 bits (683), Expect = 5.877e-90
Identity = 135/218 (61.93%), Postives = 180/218 (82.57%), Query Frame = 2

Query:   77 NEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVDTMN 730
            +E I  LD L+A+K +KE C LF+ +YN++EY  +EL+WRHARALRELANN+ DK E+ +LL + L+VAK+ L+ DE++ GCNKWY  LLDLTGRIEG KKRIENS+ VKKHLDIA  K+N +D G LH+LGVWC+E+++LSW+NRK+AATFFATPPTS+++E+L++L +AEKI+PGFY+ N LY+GK YEK+    EAK YLQKC++Y+  D+DT+N
Sbjct:    5 SEAIKFLDKLYAEKKYKEQCDLFKVQYNSKEYNNSELMWRHARALRELANNSKDKKEHDKLLNEGLNVAKNCLLIDENSSGCNKWYAFLLDLTGRIEGTKKRIENSYAVKKHLDIATVKSNGTDVGALHALGVWCYEITSLSWLNRKVAATFFATPPTSSYQESLKYLEAAEKISPGFYSQNYLYLGKVYEKMGKNGEAKEYLQKCVNYNSDDMDTVN 222

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Match: SMESG000038833.1 (SMESG000038833.1)

HSP 1 Score: 259.61 bits (662), Expect = 6.870e-87
Identity = 138/220 (62.73%), Postives = 172/220 (78.18%), Query Frame = 2

Query:   68 MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVDTM 727
            MS  + I E+D+L   K  KE+  +FETKYN+EE+Q  +LLWR+A +L ++     DKAE+KRLL K L ++K GL  DE+N GCNKWYGILLD+TGRIEGIK+RIENSF VKKHL+IANEK+NKSDC VLH+LGVWC+EVSALSWINRK+A TFFA+PPTSTFEEAL  L  AEK  PG+ A+N +Y+GKTY +L  K EAK + QK +D+  +D DT+
Sbjct:    1 MSVAQAIAEIDELRCNKKVKEVIDVFETKYNSEEFQVPDLLWRYAASLYDIGIGEKDKAEHKRLLTKGLDMSKLGLDKDENNAGCNKWYGILLDVTGRIEGIKQRIENSFIVKKHLEIANEKSNKSDCLVLHALGVWCYEVSALSWINRKVAETFFASPPTSTFEEALVFLLDAEKKKPGYLAANYVYLGKTYFQLNQKAEAKEFFQKTIDFQASDADTV 220

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Match: SMESG000038799.1 (SMESG000038799.1)

HSP 1 Score: 208.379 bits (529), Expect = 1.824e-67
Identity = 109/173 (63.01%), Postives = 145/173 (83.82%), Query Frame = 2

Query:   77 NEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRELANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEK 595
            +E I  LD L+A+K +KE C LF+ +YN++EY  +EL+WRHARALRELANN+ DK E+ +LL + L+VAK+ L+ DE++ GCNKWY  LLDLTGRIEG KKRIENS+ VKKHLDIA  K+N +D G LH+LGVWC+E+++LSW+NRK+AATFFATPPTS+++E+L++L +AEK
Sbjct:    5 SEAIKFLDKLYAEKKYKEQCDLFKVQYNSKEYNNSELMWRHARALRELANNSKDKKEHDKLLNEGLNVAKNCLLIDENSSGCNKWYAFLLDLTGRIEGTKKRIENSYAVKKHLDIATVKSNGTDVGALHALGVWCYEITSLSWLNRKVAATFFATPPTSSYQESLKYLEAAEK 177

[Close]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Match: SMESG000026356.1 (SMESG000026356.1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.751e-11
Identity = 54/187 (28.88%), Postives = 91/187 (48.66%), Query Frame = 2

Query:  179 AELLWRHARALRELANNTT------DKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIEGIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRKLXXXXXXXXXXXXXEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKDEAKIYLQKCLDYDGTDVD 721
             E LWR+A     +  NTT      +   N+R+   A + A S +     +   +KW  IL  +TG +   +KRI N ++ K+H+D      N  D    H  G +C++VS L +  RK+AA  FA PP +T +EAL      E++ P  Y  N  ++   Y+ L +  ++  +++   +   +D+D
Sbjct:   62 GEFLWRYAM----ITYNTTILQDLDEDIRNQRIF-GAFNNALSAVKRSPRSSEAHKWLAILYGVTGLLSDTQKRILNGYKFKEHIDKC-LNLNPLDGYANHLKGRFCYQVSNLHFYERKIAAWLFAAPPVATLDEALILFQKCEELAPNKYGENHYFLSLCYQSLGDYSKSSKFMKSAKELPCSDID 242

The following BLAST results are available for this feature:

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Fly
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Zebrafish
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Sea Lamprey
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Yeast
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RMDN1	1.428e-38	41.71	regulator of microtubule dynamics 1 [Source:HGNC S...	[more]
RMDN1	6.388e-30	38.86	regulator of microtubule dynamics 1 [Source:HGNC S...	[more]
RMDN1	2.715e-27	42.65	regulator of microtubule dynamics 1 [Source:HGNC S...	[more]
RMDN1	3.061e-25	39.88	regulator of microtubule dynamics 1 [Source:HGNC S...	[more]
RMDN1	1.349e-23	36.02	regulator of microtubule dynamics 1 [Source:HGNC S...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
F33H2.6	6.505e-33	44.91	pep chromosome:WBcel235:I:15014851:15016595:-1 gen...	[more]
rmd-6	3.901e-16	30.54	Regulator of Microtubule Dynamics [Source:UniProt...	[more]
rmd-3	1.124e-15	30.54	Regulator of Microtubule Dynamics [Source:UniProt...	[more]
rmd-2	3.568e-15	29.33	Regulator of Microtubule Dynamics [Source:UniProt...	[more]
rmd-2	3.568e-15	29.33	Regulator of Microtubule Dynamics [Source:UniProt...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
rmdn1	4.805e-37	38.79	regulator of microtubule dynamics 1 [Source:ZFIN;A...	[more]
rmdn3	1.899e-22	36.21	regulator of microtubule dynamics 3 [Source:ZFIN;A...	[more]
rmdn3	2.441e-22	36.21	regulator of microtubule dynamics 3 [Source:ZFIN;A...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
crhr2	1.557e-38	41.71	corticotropin releasing hormone receptor 2 [Source...	[more]
crhr2	2.377e-38	41.71	corticotropin releasing hormone receptor 2 [Source...	[more]
crhr2	1.782e-32	38.99	corticotropin releasing hormone receptor 2 [Source...	[more]
sult5a1	5.198e-21	35.29	sulfotransferase family 5A, member 1 [Source:Xenba...	[more]
sult5a1	6.085e-21	35.29	sulfotransferase family 5A, member 1 [Source:Xenba...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rmdn1	3.477e-36	39.34	regulator of microtubule dynamics 1 [Source:MGI Sy...	[more]
Rmdn3	5.633e-21	29.95	regulator of microtubule dynamics 3 [Source:MGI Sy...	[more]
Rmdn2	1.208e-17	33.73	regulator of microtubule dynamics 2 [Source:MGI Sy...	[more]
Rmdn2	1.208e-17	33.73	regulator of microtubule dynamics 2 [Source:MGI Sy...	[more]
Rmdn1	5.905e-14	36.52	regulator of microtubule dynamics 1 [Source:MGI Sy...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q32KL4\|RMD1_BOVIN	3.187e-38	40.74	Regulator of microtubule dynamics protein 1 OS=Bos...	[more]
sp\|Q96DB5\|RMD1_HUMAN	6.857e-38	41.71	Regulator of microtubule dynamics protein 1 OS=Hom...	[more]
sp\|Q5R8E4\|RMD1_PONAB	2.973e-37	41.71	Regulator of microtubule dynamics protein 1 OS=Pon...	[more]
sp\|Q9DCV4\|RMD1_MOUSE	2.432e-35	39.34	Regulator of microtubule dynamics protein 1 OS=Mus...	[more]
sp\|Q4G069\|RMD1_RAT	8.455e-35	40.28	Regulator of microtubule dynamics protein 1 OS=Rat...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8G7Y4	6.175e-49	50.00	TPR_REGION domain-containing protein OS=Macrostomu...	[more]
A0A1I8J620	6.206e-49	50.00	TPR_REGION domain-containing protein OS=Macrostomu...	[more]
A0A267EG72	6.296e-49	50.00	TPR_REGION domain-containing protein (Fragment) OS...	[more]
A0A267G635	6.523e-49	50.00	TPR_REGION domain-containing protein (Fragment) OS...	[more]
A0A267EID1	7.099e-49	50.00	TPR_REGION domain-containing protein (Fragment) OS...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rmdn1	1.379e-37	40.93	regulator of microtubule dynamics 1 [Source:NCBI g...	[more]
rmdn1	2.055e-37	40.93	regulator of microtubule dynamics 1 [Source:NCBI g...	[more]
rmdn3	6.646e-23	35.43	regulator of microtubule dynamics protein 3 [Sourc...	[more]
rmdn3	1.877e-22	35.43	regulator of microtubule dynamics protein 3 [Sourc...	[more]
ENSAMXT00000050699.1	3.046e-18	31.98	regulator of microtubule dynamics protein 2 [Sourc...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3


Match Name	E-value	Identity	Description
ENSPMAT00000003862.1	8.826e-37	40.98	pep scaffold:Pmarinus_7.0:GL489646:3760:6869:-1 ge...	[more]
rmdn3	6.102e-21	35.80	regulator of microtubule dynamics 3 [Source:ZFIN;A...	[more]
ENSPMAT00000009395.1	1.896e-18	35.98	pep scaffold:Pmarinus_7.0:GL478442:15946:21596:1 g...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4


Match Name	E-value	Identity	Description
EDO33467	3.377e-34	37.69	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34531	4.256e-29	36.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32079	1.395e-20	36.87	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28338	6.120e-9	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rmdn1	3.205e-37	40.00	regulator of microtubule dynamics 1 [Source:NCBI g...	[more]
rmdn1	4.607e-37	40.00	regulator of microtubule dynamics 1 [Source:NCBI g...	[more]
rmdn3	5.001e-19	34.88	regulator of microtubule dynamics protein 3 [Sourc...	[more]
ENSORLT00000041136.1	8.183e-15	27.01	regulator of microtubule dynamics protein 2 [Sourc...	[more]
ENSORLT00000033047.1	8.806e-15	27.01	regulator of microtubule dynamics protein 2 [Sourc...	[more]

BLAST of Regulator of microtubule dynamics protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000038855.1	3.271e-150	99.55	SMESG000038855.1	[more]
SMESG000038799.1	5.877e-90	61.93	SMESG000038799.1	[more]
SMESG000038833.1	6.870e-87	62.73	SMESG000038833.1	[more]
SMESG000038799.1	1.824e-67	63.01	SMESG000038799.1	[more]
SMESG000026356.1	2.751e-11	28.88	SMESG000026356.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30022956 ID=SMED30022956|Name=Regulator of microtubule dynamics protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=879bp
TTAACATCAATCACAAATAATTTAATACGATTATATTTAATATTAAATTT
TTATTAATCTTTTAATAATGTCCTCCAATGAAATTATTACTGAATTAGAT
GATCTTTTCGCAAAAAAAGACTTTAAAGAATTGTGCCAATTATTTGAAAC
TAAATATAATACTGAAGAATATCAAACAGCAGAGTTATTATGGCGTCATG
CTAGAGCATTGAGAGAATTAGCCAACAATACAACTGATAAGGCTGAAAAC
AAACGTCTACTTCAAAAAGCTTTGTCGGTTGCAAAAAGTGGTCTGGTGAA
TGACGAAAGCAATGTCGGATGTAATAAATGGTACGGAATTTTGCTTGATT
TAACTGGAAGAATCGAAGGAATTAAAAAACGAATTGAAAATTCATTTGAG
GTCAAAAAACATTTGGATATAGCCAATGAGAAAGCAAATAAATCCGATTG
CGGTGTGTTGCATTCACTAGGTGTTTGGTGCTTTGAAGTTTCTGCTTTGA
GCTGGATCAATAGAAAGCTAGCGGCAACATTTTTTGCAACACCTCCTACA
TCAACATTTGAAGAGGCTCTTGAACATCTGACTTCAGCTGAAAAAATTAA
TCCTGGTTTTTATGCATCAAATTTGTTATATATTGGGAAAACGTATGAAA
AATTGAAAAATAAAGATGAAGCCAAAATTTACTTACAAAAATGTTTGGAC
TACGACGGAACCGATGTTGATACAATGAATGCGAAGGAAGAGGCGAAGGA
ATTAATGAAGAAATTGTAGGATAATTGTCGAAAATGAAAATTACTGAAAG
ATTTTTAACGTTGATATTTTCTGTTGTTGGTGTGTTTTAAATTTAGTTAA
TTGAAATCATTTGTCTTGTTGAAAAAAAA

protein sequence of SMED30022956-orf-1

>SMED30022956-orf-1 ID=SMED30022956-orf-1|Name=SMED30022956-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=234bp
MSSNEIITELDDLFAKKDFKELCQLFETKYNTEEYQTAELLWRHARALRE
LANNTTDKAENKRLLQKALSVAKSGLVNDESNVGCNKWYGILLDLTGRIE
GIKKRIENSFEVKKHLDIANEKANKSDCGVLHSLGVWCFEVSALSWINRK
LAATFFATPPTSTFEEALEHLTSAEKINPGFYASNLLYIGKTYEKLKNKD
EAKIYLQKCLDYDGTDVDTMNAKEEAKELMKKL*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000070	intestinal phagocyte
PLANA:0000099	neuron
PLANA:0002032	epidermal cell
PLANA:0003116	parenchymal cell
PLANA:0007528	glial cell

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **cellular component**
Term	Definition
GO:0000922	spindle pole
GO:0005737	cytoplasm
GO:0005819	spindle
GO:0005856	cytoskeleton
GO:0005874	microtubule

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 4..233 e-value: 3.1E-11 score: 45.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 54..229
None	No IPR available	PANTHER	PTHR16056:SF16		coord: 4..232
None	No IPR available	PANTHER	PTHR16056	UNCHARACTERIZED	coord: 4..232
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 164..216 score: 8.755

Main menu

Regulator of microtubule dynamics protein 1

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 15

Owlery

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