neurofilament heavy polypeptide isoform X5

Overview
Nameneurofilament heavy polypeptide isoform X5
Smed IDSMED30022914
Length (bp)2315
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of neurofilament heavy polypeptide isoform X5 (SMED30022914) t-SNE clustered cells

Violin plots show distribution of expression levels for neurofilament heavy polypeptide isoform X5 (SMED30022914) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of neurofilament heavy polypeptide isoform X5 (SMED30022914) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for neurofilament heavy polypeptide isoform X5 (SMED30022914) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30022914

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parapharyngeal regionSMED30022914h1SMcG0013747 SmedASXL_016143SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30022914h1SMcG0013747 Contig50916uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30022914h1SMcG0013747 Contig50916newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
pharynxSMED30022914h1SMcG0013747 dd_Smed_v4_11421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30022914h1SMcG0013747 dd_Smed_v6_11421_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30022914h1SMcG0013747 dd_Smed_v6_11421_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Match: A0A267H186 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig016521g2 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 5.220e-50
Identity = 187/756 (24.74%), Postives = 382/756 (50.53%), Query Frame = 1 
Query:  130 FQSILPPIIQTKQFNEKSEGLSIP---------------------QRISMLEEKSKNFEMANFKLIEIVFQLKKALEA-SKPGEYGNQQDSPSL----------SGIVQQLENRLK-KVERLSENKMA--------------PLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQ------IVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDI---HARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQ---TEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDW---LKSPVSFLA--INQWSIYSILKWIKYKEKLL 2205
            F S  PP+       ++ E L+ P                     +R+  LE +    E +N  L++ V +L+  + A S+ GE   +++  +           S +  QL  R++ + ERL++ + A               L ++ DL     SQ+S R+ T+  ++++M   K +LE +  +L EEM  LK ++  QG   ++ ++    K++RL ++Y   L+S+  K+  T E  +Q      +V++ I+          L+  +  ++ + E ++    + E  L  R++++   L+++ R R+  +  ++   ++     +  R  L       L E   K +++E  +R    ++ +E EK+++ E+E R + EK+      R  D + RA  H+ EL + +R     +  KT E+V++I     ++E+  +ET +    V+ AEI +RK      K  +  +EEKI AATAA+Q AV+G++ ++++ +E +  K+   + + +++    R   DI++QL+ L  +++ ++  VE+++A AT+ ++  +RE + S+  WQ  + A + EM+AV  ++ + + +    +N ++ +  + +  E   R+Q +  +R +I+ ++ ++     + + D+++   SIR+LAE  Q++K+ +GMKIQSEQ++R+ ++K++Q    ++R I E  + +    +E +    +KP     +DW    +  V  +A  +N WSIYS  +W+ +KEK +
Sbjct:   40 FPSRFPPLPDISGQEQQLEPLARPFNASSYSAAPAANSAADSSSDERVRSLETRLGLAERSNRGLLDEVLRLQTEVRAVSRRGEEAIREERQARQYLEASLRTSSDLTSQLAQRIRAQEERLADERAALADVVNQTRSVEQLTLERQQDLTAKRESQIS-RIATLERDLESMTRAKGQLERVAFQLVEEMRALKQRLEAQGLDFSTVTSDLKVKSRRLEDDYNLRLESVQRKLEKTSELDQQSQQLRGLVDAKITE---------LRDALTELRSRSETESDERRNLEQKLGSRLTQMNSALAEQARKRDEALHGMEQRQRERERQAEVDRATLQARLQDSLEEVNQKILEKEIRLREEAARRQAESEKMILQEQESRLAYEKEARQEQERRWDTLRRA--HEEELAS-LRATHKSDRAKTVESVRKIDDAVVILEKQLEETRKDMSRVLGAEIASRKAKDKDTKDRMHEVEEKISAATAALQQAVAGVSTQMRSLSEAN--KKHMQEMLEEYRKENGRKLADIEAQLESLRQRLAGVDDRVESKLAAATTAMTQNLREKVESISLWQTQTNAQVAEMKAVHKTIDEGVNRNTERINLLKEDTRANIGAEVSGRVQDVDSLRKEIDIVRSLIPKDEGITKRDLEECQASIRRLAEITQTVKTVLGMKIQSEQKLRVEEVKNVQNDIAQLRAIIEPLIER---MIEPR--MFVKP-----DDWKVQGRDAVESVADDVNTWSIYSAYRWMYFKEKWM 770
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Match: A0A1I8HGB3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.491e-49
Identity = 179/711 (25.18%), Postives = 371/711 (52.18%), Query Frame = 1 
Query:  202 QRISMLEEKSKNFEMANFKLIEIVFQLKKALEA-SKPGEYGNQQDSPSL----------SGIVQQLENRLK-KVERLSENKMA--------------PLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQ------IVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDI---HARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQ---TEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDW---LKSPVSFLA--INQWSIYSILKWIKYKEKLL 2205
            +R+  LE +    E +N  L++ V +L+  + A S+ GE   +++  +           S +  QL  R++ + ERL++ + A               L ++ DL     SQ+S R+ T+  ++++M   K +LE +  +L EEM  LK ++  QG   ++ ++    K++RL ++Y   L+S+  K+  T E  +Q      +V++ I+          L+  +  ++ + E ++    + E  L  R++++   L+++ R R+  +  ++   ++     +  R  L       L E   K +++E  +R    ++ +E EK+++ E+E R + EK+      R  D + RA  H+ EL + +R     +  KT E+V++I     ++E+  +ET +    V+ AEI +RK      K  +  +EEKI AATAA+Q AV+G++ ++++ +E +  K+   + + +++    R   DI++QL+ L  +++ ++  VE+++A AT+ ++  +RE + S+  WQ  + A + EM+A+  ++ + + +    +N ++ +  + +  E   R+Q +  +R +I+ ++ ++     + + D+++   SIR+LAE  Q++K+ +GMKIQSEQ++R+ ++K++Q    ++R I E  + +    +E +    +KP     +DW    +  V  +A  +N WSIYS  +W+ +KEK +
Sbjct:   32 ERVRSLETRLGLAERSNRGLLDEVLRLQTEVRAVSRRGEEAIREERQARQYLEASLRTSSDLTSQLAQRIRAQEERLADERAALADVVNQTRSVEQLTLERQQDLTAKRESQIS-RIATLERDLESMTRAKGQLERVAFQLVEEMRALKQRLEAQGLDFSTVTSDLKVKSRRLEDDYNLRLESVQRKLEKTSELDQQSQQLRGLVDAKITE---------LRDALTELRSRSETESDERRNLEQKLGSRLTQMNSALAEQARKRDEALHGMEQRQRERERQAEVDRATLQARLQDSLEEVNQKILEKEIRLREEAARRQAESEKMILQEQESRLAYEKEARQEQERRWDTLRRA--HEEELAS-LRATHKSDRAKTVESVRKIDDAVVILEKQLEETRKDMSRVLGAEIASRKAKDKDTKDRMHEVEEKISAATAALQQAVAGVSTQMRSLSEAN--KKHMQEMLEEYRKENGRKLADIEAQLESLRQRLAGVDDRVESKLAAATTAMTQNLREKVESISLWQTQTNAQVAEMKAMHKTIDEGVNRNTERINLLKEDTRANIGAEVSGRVQDVDSLRKEIDIVRSLIPKDEGITKRDLEECQASIRRLAEITQTVKTVLGMKIQSEQKLRVEEVKNVQNDIAQLRAIIEPLIER---MIEPR--MFVKP-----DDWKVQGRDAVESVADDVNTWSIYSAYRWMYFKEKWM 717
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Match: A0A267FZI3 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig016521g1 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.015e-49
Identity = 179/711 (25.18%), Postives = 371/711 (52.18%), Query Frame = 1 
Query:  202 QRISMLEEKSKNFEMANFKLIEIVFQLKKALEA-SKPGEYGNQQDSPSL----------SGIVQQLENRLK-KVERLSENKMA--------------PLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQ------IVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDI---HARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQ---TEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDW---LKSPVSFLA--INQWSIYSILKWIKYKEKLL 2205
            +R+  LE +    E +N  L++ V +L+  + A S+ GE   +++  +           S +  QL  R++ + ERL++ + A               L ++ DL     SQ+S R+ T+  ++++M   K +LE +  +L EEM  LK ++  QG   ++ ++    K++RL ++Y   L+S+  K+  T E  +Q      +V++ I+          L+  +  ++ + E ++    + E  L  R++++   L+++ R R+  +  ++   ++     +  R  L       L E   K +++E  +R    ++ +E EK+++ E+E R + EK+      R  D + RA  H+ EL + +R     +  KT E+V++I     ++E+  +ET +    V+ AEI +RK      K  +  +EEKI AATAA+Q AV+G++ ++++ +E +  K+   + + +++    R   DI++QL+ L  +++ ++  VE+++A AT+ ++  +RE + S+  WQ  + A + EM+A+  ++ + + +    +N ++ +  + +  E   R+Q +  +R +I+ ++ ++     + + D+++   SIR+LAE  Q++K+ +GMKIQSEQ++R+ ++K++Q    ++R I E  + +    +E +    +KP     +DW    +  V  +A  +N WSIYS  +W+ +KEK +
Sbjct:   85 ERVRSLETRLGLAERSNRGLLDEVLRLQTEVRAVSRRGEEAIREERQARQYLEASLRTSSDLTSQLAQRIRAQEERLADERAALADVVNQTRSVEQLTLERQQDLTAKRESQIS-RIATLERDLESMTRAKGQLERVAFQLVEEMRALKQRLEAQGLDFSTVTSDLKVKSRRLEDDYNLRLESVQRKLEKTSELDQQSQQLRGLVDAKITE---------LRDALTELRSRSETESDERRNLEQKLGSRLTQMNSALAEQARKRDEALHGMEQRQRERERQAEVDRATLQARLQDSLEEVNQKILEKEIRLREEAARRQTESEKMILQEQESRLAYEKEARQEQERRWDTLRRA--HEEELAS-LRATHKSDRAKTVESVRKIDDAVVILEKQLEETRKDMSRVLGAEIASRKAKDKDTKDRMHDVEEKISAATAALQQAVAGVSTQMRSLSEAN--KKHMQEMLEEYRKENGRKLADIEAQLESLRQRLAGVDDRVESKLAAATTAMTQNLREKVESISLWQTQTNAQVAEMKAMHKTIDEGVNRNTERINLLKEDTRANIGAEVSGRVQDVDSLRKEIDIVRSLIPKDEGITKRDLEECQASIRRLAEITQTVKTVLGMKIQSEQKLRVEEVKNVQNDIAQLRAIIEPLIER---MIEPR--MFVKP-----DDWKVQGRDAVESVADDVNTWSIYSAYRWMYFKEKWM 770
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Match: A0A210QGC4 (Uncharacterized protein OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT06197 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.203e-31
Identity = 129/575 (22.43%), Postives = 288/575 (50.09%), Query Frame = 1 
Query:  514 KSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEM-DIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPV------SFLAINQWSIYSILKWIKYKEK--LLLW 2211
            KS+LE +  +L +++  LK ++  Q     + S    +K+K+L +E    LD++        ++ +Q   +++   +       L+  + +++ K E +       E ++  +++EL Q L++  R R+  +  +D+V ++  H   + R+ L       + +   K M+++  +R     +  + E++L  ++  R   E+     +   +      Q E   +I+  +     KT  T+ ++     ++E+   ET + +  V+ AEI  RK         +  + EK++ AT+ +Q ++ G+ +   N+ E  +L++     + + +   +R+ TD+D+++     +++ +   +E ++A A+ +L+  +RE + ++ +WQ  ++  +KE+      + +E+  +Q     ++SE+ S+MT E+D RI+ I +++ +++ LK  M  +P    + DI+ +  S+R+LA+++Q++K+ +GMKIQSEQ++R   ++ LQ E+  +        ++++E     + KPL  S   ++K         S   +N+WS+ +  KW  +K K   LLW
Sbjct:  193 KSQLERVAFQLADDLRTLKIKVDSQAADFNAVSGDLKNKSKKLEDENRAQLDALRKHTSNQSQSEQQ---ATLLRGQVETRLTELRDVLVDVRTKQENEVSERRGLEQSMQQKINELQQSLAEANRKRDETVHSMDMVLREREHATQADRLSLTTKVADTVEDLNKKLMEKDIKIRGEVQDRYLQLERVLQQDQGTRREYERATRDELEKRLGTLKKVQDEQAVEIKDLMKTEKGKTKNTLGKLDDSITILEKQVLETKKSFEKVMAAEISQRKIHERDTAEKIGSVNEKLQIATSTLQQSIGGITHTANNQHE--KLRREMRTLLAEQKEGTTRSLTDLDARMNYSKNRMNDLEEKLEAKMAAASQNLAESLREKVDTISAWQEQTSQTVKELSLGVQRLPEEIYSVQEKQTLMKSEMNSRMTAEADARIREIENLKQEVQMLK--MKREPKAATISDIENVQASVRRLADSIQTVKTVLGMKIQSEQKLRTDDVQKLQEEIAIL--------RTAIEP---LVKKPLPRS---FVKDSARGSRADSTPEVNKWSVPNAYKWSVWKAKWMYLLW 746
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Match: A0A1S3H751 (neurofilament heavy polypeptide isoform X5 OS=Lingula unguis OX=7574 GN=LOC106152771 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.196e-30
Identity = 159/649 (24.50%), Postives = 316/649 (48.69%), Query Frame = 1 
Query:  352 IVQQLENRLKKVE-RLSENKMA--------------PLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNN----------LDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYM-SRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESL-----KIVMNTQPAVK--------EMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPVSFLAINQWSIYSILKW 2181
            ++ QL +RLK+ E +++E +MA               L  + +L     +Q + RL  + +E++ ++  K +LE L   L +EM  LK ++  Q    AS +N   +K KRL  E              + S++D    T    RQ + S +S          L+  + +++ K E +T      E  +  ++SEL   ++++ R RE  +  LD + ++  H  ++ R+ L         E   K + +E  +R  + +K +  EKL+ NE+  R + E D+   ++   +         +  ++Q       KT+ET+ ++     L++   ++  ++   +++AEI++RK      +  V  L+EK+  AT+ +Q AV G+  ++Q  TE D LK+   K I + +    +R   D+D+++  L  +IS +  ++E +I  +++  +  +R+ + S+  WQ  ++  ++++Q     +  E+ ++Q     ++S++  ++T E++ R + + ++R  +  L     K +   + A K          DID+  ES+ KLAE++Q+IK+ +GMKI +E ++R+ ++K+LQ E+  +         S  E K    +KP   S E+  +S  S  ++N+W +YS  KW
Sbjct:  122 LIAQLSSRLKRTEDKIAEERMAISALVNHTKSVEQAVLGSQQELVSRKEAQTA-RLQEMKEELEEVSRAKDQLERLTFNLVDEMRQLKGRMDNQNMDFASVANDLKNKNKRLEEENRQTRLESVRKHAEVQSLSD---STSSQLRQQIESRLSE---------LRDVLVDLRGKQEGETQERRMLEQAVQKKISELMSNIAEQNRKREEAMHALDSIQREREHAAETERIKLQGKIAETAEEVSKKILQKEIKLREESQEKFNMVEKLISNEQSARMAFESDLRRELDKRWDSVKKSNEGDLQAVKQAQKLERAKTSETLHKLDEAVDLLQGQIEQYKKQQEKLLSAEIKSRKTHERDTREKVENLQEKLGIATSTLQAAVGGIMTKLQ--TESDRLKKEM-KSIAEEEAQKNTRLMADLDTRVTGLNSKISNVEDSLEAKITGSSAAQAQNMRDKVESISLWQDVTSQSIRDIQYKVQELPMEVYQLQEKHELLKSDLTGKVTAEAESRKRDVENLRRDLSRLVAAPGKGLAGDKTATKSDFDAYKLREDIDECQESLHKLAESVQTIKTVLGMKIATESKLRVEEVKNLQDELNRLRGLVDPLLTSGSEPK--VFVKPTGASKEE-AESQAS--SVNRWGVYSAYKW 749
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. Planmine SMEST
Match: SMESG000058734.1 (SMESG000058734.1)

HSP 1 Score: 1399.03 bits (3620), Expect = 0.000e+0
Identity = 701/703 (99.72%), Postives = 702/703 (99.86%), Query Frame = 1 
Query:  103 PNSSEIVTKFQSILPPIIQTKQFNEKSEGLSIPQRISMLEEKSKNFEMANFKLIEIVFQLKKALEASKPGEYGNQQDSPSLSGIVQQLENRLKKVERLSENKMAPLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPVSFLAINQWSIYSILKWIKYKEKLLLW 2211
            PNSSEIVTKFQSILPPIIQTKQFNEKSEGLSIPQRISMLEEKSKNFEMANFKLIE+VFQLKKALEASKPGEYGNQQDSPSLSGIVQQLENRLKKVERLSENKMAPLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMK EEQTHIYSSSESNLAFRVSELAQKLSDERRIREVEIRRLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPVSFLAINQWSIYSILKWIKYKEKLLLW
Sbjct:    2 PNSSEIVTKFQSILPPIIQTKQFNEKSEGLSIPQRISMLEEKSKNFEMANFKLIEMVFQLKKALEASKPGEYGNQQDSPSLSGIVQQLENRLKKVERLSENKMAPLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKLEEQTHIYSSSESNLAFRVSELAQKLSDERRIREVEIRRLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEEQFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPVSFLAINQWSIYSILKWIKYKEKLLLW 704
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. Planmine SMEST
Match: SMESG000068550.1 (SMESG000068550.1)

HSP 1 Score: 153.68 bits (387), Expect = 2.481e-38
Identity = 126/517 (24.37%), Postives = 283/517 (54.74%), Query Frame = 1 
Query:  469 RLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEM 2019
            +L  +  EM+ +N  ++++E +  +L +EM  +K+++  QG    + +++  +K+K+L +EY  NLD +  ++     +    +  S+      +    +K  I  I+  F+++ +     E  +  + +E++  +S++ RIR+  IR++  + ++  H  ++ RM++ N    +  +  S+ ++++  +R    ++ +E EKL+ +E+E R S E++I       +E     Q + +N I+     +  K  E+++++     L+E+  DE  ++   +ITAE++AR       K     LEEKI AAT+++Q A+SG+ ++       D+++++T+  I +++  ++R   D+D+++  L    S  + + E RI +  S +++ ++E + ++   Q  ++A + +++  +  + QE+ ++       ++E   ++T E + RI+    +R ++E L+  +  +  V + D++K+  + RKLAE++Q+IK+ +GMKIQSEQ +R+ +IK  Q E+
Sbjct:  194 KLAQLEREMETLNDNRNKIERISFQLVDEMRAIKSKLESQGFDFHAVTHELRNKSKKLEDEYQQNLDVVKKQLSRNDNS----ITDSMYRPAVDQKLAEMKDYITQIRTWFDDEVNERRILEKTIMSKFTEISHAMSEQTRIRDEAIRQIQYLQRERDHKIETERMLIQNKIGEITEQINSRVLEKDLRLREDQLKRQTELEKLMRSEQETRISYEREIRIENERRLEAMRQLQLDELNSIKDSFRYDKMKYVESIKRLDESLSLLERQIDENKQEITKIITAEVKARSNSEKLFKERYTELEEKIMAATSSLQHALSGVFDKSMPNN--DKIRKLTNDTIDEYKASINRQIADLDARILHLQTLSSGGSADFEERIKEVISSVNSALKERIETISLNQGATSASIAQLKIQKQQLKQEIYELNELFMLAKAESSGRITAEMNSRIETEEALRFELEKLRETI-PKEIVNKTDLEKVKSTARKLAESMQTIKTVLGMKIQSEQNLRIEEIKHHQEEL 703
[Close]
BLAST of neurofilament heavy polypeptide isoform X5 vs. Planmine SMEST
Match: SMESG000068550.1 (SMESG000068550.1)

HSP 1 Score: 152.91 bits (385), Expect = 3.185e-38
Identity = 126/517 (24.37%), Postives = 283/517 (54.74%), Query Frame = 1 
Query:  469 RLITINDEMDNMNTEKSRLENLIIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDKVVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSESNLAFRVSELAQKLSDXXXXXXXXXXXLDLVCQDAFHTQDSTRMILDNHFTGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHARINDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDETLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLANRIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLNVETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAKMQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEMDIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEM 2019
            +L  +  EM+ +N  ++++E +  +L +EM  +K+++  QG    + +++  +K+K+L +EY  NLD +  ++     +    +  S+      +    +K  I  I+  F+++ +     E  +  + +E++  +S++ RIR+  IR++  + ++  H  ++ RM++ N    +  +  S+ ++++  +R    ++ +E EKL+ +E+E R S E++I       +E     Q + +N I+     +  K  E+++++     L+E+  DE  ++   +ITAE++AR       K     LEEKI AAT+++Q A+SG+ ++       D+++++T+  I +++  ++R   D+D+++  L    S  + + E RI +  S +++ ++E + ++   Q  ++A + +++  +  + QE+ ++       ++E   ++T E + RI+    +R ++E L+  +  +  V + D++K+  + RKLAE++Q+IK+ +GMKIQSEQ +R+ +IK  Q E+
Sbjct:  165 KLAQLEREMETLNDNRNKIERISFQLVDEMRAIKSKLESQGFDFHAVTHELRNKSKKLEDEYQQNLDVVKKQLSRNDNS----ITDSMYRPAVDQKLAEMKDYITQIRTWFDDEVNERRILEKTIMSKFTEISHAMSEQTRIRDEAIRQIQYLQRERDHKIETERMLIQNKIGEITEQINSRVLEKDLRLREDQLKRQTELEKLMRSEQETRISYEREIRIENERRLEAMRQLQLDELNSIKDSFRYDKMKYVESIKRLDESLSLLERQIDENKQEITKIITAEVKARSNSEKLFKERYTELEEKIMAATSSLQHALSGVFDKSMPNN--DKIRKLTNDTIDEYKASINRQIADLDARILHLQTLSSGGSADFEERIKEVISSVNSALKERIETISLNQGATSASIAQLKIQKQQLKQEIYELNELFMLAKAESSGRITAEMNSRIETEEALRFELEKLRETI-PKEIVNKTDLEKVKSTARKLAESMQTIKTVLGMKIQSEQNLRIEEIKHHQEEL 674
The following BLAST results are available for this feature:
BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267H1865.220e-5024.74Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8HGB31.491e-4925.18Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267FZI32.015e-4925.18Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A210QGC42.203e-3122.43Uncharacterized protein OS=Mizuhopecten yessoensis... [more]
A0A1S3H7511.196e-3024.50neurofilament heavy polypeptide isoform X5 OS=Ling... [more]
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of neurofilament heavy polypeptide isoform X5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000058734.10.000e+099.72SMESG000058734.1[more]
SMESG000068550.12.481e-3824.37SMESG000068550.1[more]
SMESG000068550.13.185e-3824.37SMESG000068550.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30022914 ID=SMED30022914|Name=neurofilament heavy polypeptide isoform X5|organism=Schmidtea mediterranea sexual|type=transcript|length=2315bp
GTGAATTATATCAAATATCAAACTTTGTCACCCAATATAAACAAAGTTTT
GTGCTCTGAAATAAAGTTATTTATTTAAAATAAAATGAATATAAGCTTAA
GGCCAAATTCCTCTGAAATTGTGACCAAATTTCAATCTATCCTCCCGCCG
ATAATCCAGACAAAACAGTTCAATGAAAAAAGTGAAGGTCTTTCAATTCC
TCAGAGAATTTCGATGCTGGAAGAGAAGTCAAAAAATTTTGAGATGGCAA
ATTTTAAACTCATCGAAATTGTTTTTCAATTGAAAAAGGCTTTGGAAGCT
TCGAAGCCGGGTGAATACGGAAACCAACAAGATTCACCATCACTAAGCGG
TATCGTCCAGCAATTGGAAAACCGACTGAAAAAAGTTGAAAGACTGTCAG
AAAATAAAATGGCGCCTCTGAATAAAGAAATTGACTTGTATGACAATAGT
TTCAGTCAGTTGTCCAATAGACTTATCACAATAAACGATGAAATGGACAA
CATGAATACCGAGAAAAGCAGACTGGAAAATCTGATCATAAAATTGACCG
AAGAAATGTTTCTCTTGAAAAATCAAATCGTGATTCAAGGTGACTTGTTG
GCCTCAACAAGTAACCAGTACAACAGTAAAACAAAAAGGTTGCACAATGA
GTATTTGAATAACTTGGATTCCATTACCGATAAAGTAGTTTATACTCAAG
AGACTGCCCGCCAAATTGTCAACAGCTCAATAAGCCACGAGGAATTCATT
GAAGCATTTAACAGCTTAAAACACGATATAAAGAATATAAAAATGAAATT
TGAAGAACAAACTCATATATATTCGTCTTCGGAGTCGAATTTAGCATTTA
GAGTCAGTGAATTGGCACAAAAGCTAAGCGACGAGCGAAGAATTCGAGAG
GTTGAGATAAGACGTCTGGACCTTGTCTGCCAAGATGCCTTTCATACTCA
AGACTCCACTAGAATGATCCTGGACAACCATTTCACTGGTTTGCTATCCG
AGTCAATGTCTAAGCAGATGGATAGAGAAACATCTATGCGAATTACAACT
AATCAGAAGATTTCGGAATTCGAAAAGTTGCTAATAAATGAAAAGGAATT
GCGTACCAGCAAAGAGAAAGATATTCATGCTAGAATCAACGATGTAATGG
AACGAGCAACAACTCATCAACATGAATTAATGAATCAAATTCGTCAACAT
TTGGATCAAAATCATAATAAAACAAATGAAACCGTCCAGCAAATCGTTAC
TGGCCAAAGGCTCATTGAACAAAGTTTTGATGAAACTCTAAGAAAATACT
TTTTAGTAATTACGGCTGAAATAGAAGCAAGAAAAAAACTTCACGGAGCT
GTAAAGACTGATGTCATGATTTTGGAAGAGAAAATAAGAGCAGCAACGGC
AGCAATGCAATTGGCTGTGTCAGGATTAGCCAATCGAATTCAAAATAAAA
CGGAAGTAGATGAATTGAAACAAATTACAGATAAAAGAATTTGTGATTTT
CAACTTTACATGAGCCGTAATTTTACAGACATTGATTCCCAGCTGCAAAT
ATTAGCAGGCCAAATCTCTACTATCAATCTTAATGTTGAAACAAGGATAG
CTCAAGCTACCAGCGACCTGTCAACTGAAGTAAGAGAAACGCTATCGTCA
GTAATATCATGGCAGGCAAATAGCACAGCACATCTGAAAGAGATGCAAGC
CGTACGAGTCAGTGTAATGCAAGAGCTGGCCAAGATGCAACTTACATTGA
ACCACATAGAATCAGAAATACCAAGTCAGATGACAATAGAAAGTGATGAA
AGAATTCAGGCAATTGGAGATATTCGACATCAAATCGAATCCTTAAAGAT
TGTTATGAACACCCAACCTGCCGTAAAGGAAATGGATATTGATAAAATTC
ATGAAAGTATACGAAAATTGGCAGAAACTTTGCAGTCGATCAAATCGACG
ATGGGAATGAAGATTCAATCGGAACAGGAAATGAGATTGCATCAAATAAA
AGACTTACAAACTGAGATGAGATATATTGAGGAACAATTCATGGCCAAAT
CAAAAAGTTCAGTAGAAAAGAAAAAGAATTATATAATAAAACCCTTAGAA
GAGTCTAGTGAAGATTGGCTGAAGAGTCCAGTTTCATTTTTAGCCATCAA
TCAATGGTCCATATATTCGATTTTGAAATGGATAAAATATAAAGAGAAAT
TGCTGTTGTGGAAAAATAAAGCCATGAAAAATAAAGGAAAACGGAAAACC
AAAAAAACTGGAGGATTTTGGAAGAAATCCAAAAACTGATAATGAAATTT
AGTATCTTTTTTCAG
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protein sequence of SMED30022914-orf-1

>SMED30022914-orf-1 ID=SMED30022914-orf-1|Name=SMED30022914-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=735bp
MNISLRPNSSEIVTKFQSILPPIIQTKQFNEKSEGLSIPQRISMLEEKSK
NFEMANFKLIEIVFQLKKALEASKPGEYGNQQDSPSLSGIVQQLENRLKK
VERLSENKMAPLNKEIDLYDNSFSQLSNRLITINDEMDNMNTEKSRLENL
IIKLTEEMFLLKNQIVIQGDLLASTSNQYNSKTKRLHNEYLNNLDSITDK
VVYTQETARQIVNSSISHEEFIEAFNSLKHDIKNIKMKFEEQTHIYSSSE
SNLAFRVSELAQKLSDERRIREVEIRRLDLVCQDAFHTQDSTRMILDNHF
TGLLSESMSKQMDRETSMRITTNQKISEFEKLLINEKELRTSKEKDIHAR
INDVMERATTHQHELMNQIRQHLDQNHNKTNETVQQIVTGQRLIEQSFDE
TLRKYFLVITAEIEARKKLHGAVKTDVMILEEKIRAATAAMQLAVSGLAN
RIQNKTEVDELKQITDKRICDFQLYMSRNFTDIDSQLQILAGQISTINLN
VETRIAQATSDLSTEVRETLSSVISWQANSTAHLKEMQAVRVSVMQELAK
MQLTLNHIESEIPSQMTIESDERIQAIGDIRHQIESLKIVMNTQPAVKEM
DIDKIHESIRKLAETLQSIKSTMGMKIQSEQEMRLHQIKDLQTEMRYIEE
QFMAKSKSSVEKKKNYIIKPLEESSEDWLKSPVSFLAINQWSIYSILKWI
KYKEKLLLWKNKAMKNKGKRKTKKTGGFWKKSKN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000418head
PLANA:0000420parapharyngeal region