SMED30022837

Overview


Name	SMED30022837
Smed ID	SMED30022837
Length (bp)	1230

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of SMED30022837 (SMED30022837) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30022837 (SMED30022837) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30022837 (SMED30022837) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30022837 (SMED30022837) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30022837

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
reproductive organ	SMED30022837	h1SMcG0008435	Contig30333	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008435	Contig30333	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008435	Contig44856	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008435	Contig44856	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008434	Contig44856	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008434	Contig44856	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008436	Contig30333	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008436	Contig30333	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008436	Contig44856	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008436	Contig44856	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008434	Contig30333	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30022837	h1SMcG0008434	Contig30333	newmark_ests	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Alignments

SMED30022837 aligns in the following genomic locations:


Alignment Location	Alignment Score
v31.012198:2833..4111 +	5827
v31.009094:12372..13642 -	5734
v31.006766:1151..2781 +	4675
v31.010018:11231..12866 +	4656
v31.004888:37049..38543 +	3945
v31.008252:14049..15322 +	3936
v31.037195:3181..4456 -	3903
v31.005670:19590..20934 +	3846
v31.000516:133391..134924 -	3666
v31.007439:7739..8849 +	2446
v31.000392:54499..55666 +	1940

Homology

[Close]

BLAST of SMED30022837 vs. Ensembl Human
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 50.447 bits (119), Expect = 1.546e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 51.2174 bits (121), Expect = 1.885e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 50.8322 bits (120), Expect = 2.667e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 50.8322 bits (120), Expect = 3.027e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 50.8322 bits (120), Expect = 3.956e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 50.0618 bits (118), Expect = 1.910e-7
Identity = 35/115 (30.43%), Postives = 61/115 (53.04%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE---EFYKVIESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++   +     + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 1.114e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 6 Score: 49.6766 bits (117), Expect = 2.893e-6
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3

Query:  735 NVQIFIKAS-GETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K   G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

[Close]

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 51.2174 bits (121), Expect = 9.767e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 1.114e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 6 Score: 49.6766 bits (117), Expect = 2.893e-6
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3

Query:  735 NVQIFIKAS-GETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K   G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

[Close]

BLAST of SMED30022837 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  456 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 6 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  532 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 7 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  608 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 686

HSP 8 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  684 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 762

HSP 9 Score: 51.2174 bits (121), Expect = 1.155e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 10 Score: 49.6766 bits (117), Expect = 2.982e-6
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3

Query:  735 NVQIFIKAS-GETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K   G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 11 Score: 48.1358 bits (113), Expect = 8.835e-6
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  760 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836

[Close]

BLAST of SMED30022837 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  456 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 6 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  532 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 7 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  608 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 686

HSP 8 Score: 51.2174 bits (121), Expect = 1.014e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  684 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 762

HSP 9 Score: 51.2174 bits (121), Expect = 1.155e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 10 Score: 49.6766 bits (117), Expect = 2.982e-6
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3

Query:  735 NVQIFIKAS-GETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K   G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 11 Score: 48.1358 bits (113), Expect = 8.835e-6
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  760 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836

[Close]

BLAST of SMED30022837 vs. Ensembl Fly
Match: CG11700 (gene:FBgn0029856 transcript:FBtr0333520)

HSP 1 Score: 55.4546 bits (132), Expect = 2.698e-8
Identity = 42/125 (33.60%), Postives = 63/125 (50.40%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVK-EILEKDILEIDQ 1103
             +QIF+K  +G+TIT +VE    +  +K  IH +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  L++  +   K VK  I +KD +  D 
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLEVEPSDTIKHVKARIHDKDGIPPDH 268

HSP 2 Score: 51.6026 bits (122), Expect = 5.783e-7
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  + E   E Q+L   GK   + +T SD NI   STI+L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQ 154

HSP 3 Score: 51.6026 bits (122), Expect = 6.049e-7
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  + E   E Q+L   GK   + +T SD NI   STI+L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 49.6766 bits (117), Expect = 3.271e-7
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG-METEKELSEEEFY--KVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG +E    +  +++   K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 49.6766 bits (117), Expect = 3.271e-7
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG-METEKELSEEEFY--KVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG +E    +  +++   K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0345892)

HSP 1 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 6 Score: 50.8322 bits (120), Expect = 1.592e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0070933)

HSP 1 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 1.396e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 6 Score: 50.8322 bits (120), Expect = 1.592e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 50.447 bits (119), Expect = 2.166e-7
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE---EFYKVIESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++   E     + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 48.1358 bits (113), Expect = 5.905e-7
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG +
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 50.8322 bits (120), Expect = 7.519e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 8.558e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Match: CR848813.2 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_42:42047434:42048357:1 gene:ENSDARG00000116968.1 transcript:ENSDART00000187237.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR848813.2)

HSP 1 Score: 50.8322 bits (120), Expect = 1.163e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 1.163e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 1.331e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Match: UBB (si:ch211-202a12.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8486])

HSP 1 Score: 50.8322 bits (120), Expect = 1.668e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 1.668e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 1.668e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.8322 bits (120), Expect = 1.668e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 1.904e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 50.0618 bits (118), Expect = 3.855e-7
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE-EFYKVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++    K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 50.8322 bits (120), Expect = 9.759e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 1.121e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 3 Score: 48.521 bits (114), Expect = 7.048e-6
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM 965
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 229

[Close]

BLAST of SMED30022837 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 50.8322 bits (120), Expect = 3.497e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 3.497e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 3.497e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.447 bits (119), Expect = 3.882e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 50.8322 bits (120), Expect = 3.501e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   87 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 165

HSP 2 Score: 50.8322 bits (120), Expect = 3.501e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  163 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 241

HSP 3 Score: 50.8322 bits (120), Expect = 3.501e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  239 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 317

HSP 4 Score: 50.447 bits (119), Expect = 3.853e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 89

[Close]

BLAST of SMED30022837 vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 47.7506 bits (112), Expect = 4.066e-6
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Mouse
Match: Ubc (ubiquitin C [Source:MGI Symbol;Acc:MGI:98889])

HSP 1 Score: 55.8398 bits (133), Expect = 6.526e-8
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVKE 1070
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  LD+  +   K+VK+
Sbjct:  608 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLDVEPSVTTKKVKQ 712

HSP 2 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 8 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  532 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 9 Score: 50.8322 bits (120), Expect = 2.241e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVKE 1070
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  LD+  +   K+VK+
Sbjct:  608 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLDVEPSVTTKKVKQ 712

HSP 2 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 534

HSP 8 Score: 51.2174 bits (121), Expect = 2.036e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  532 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 610

HSP 9 Score: 50.8322 bits (120), Expect = 2.241e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 50.0618 bits (118), Expect = 2.920e-7
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE-EFYKVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++    K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 50.0618 bits (118), Expect = 2.920e-7
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE-EFYKVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++    K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKC 115

[Close]

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE-EFYKVI--ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++    K+I  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. UniProt/SwissProt
Match: sp|P22589|UBIQP_PHYIN (Polyubiquitin OS=Phytophthora infestans OX=4787 PE=1 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 3.315e-7
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVKE-ILEKDILEIDQ 1103
             +QIF+K  +G+TIT DVE    +  +K+ I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  LD+  +     VK+ I +K+ +  DQ
Sbjct:   76 GMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQ 192

HSP 2 Score: 54.299 bits (129), Expect = 3.605e-7
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVKE-ILEKDILEIDQ 1103
            +QIF+K  +G+TIT DVE    +  +K+ I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  LD+  +     VK+ I +K+ +  DQ
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQ 116

HSP 3 Score: 50.447 bits (119), Expect = 7.017e-6
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT DVE    +  +K+ I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  152 GMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

[Close]

BLAST of SMED30022837 vs. UniProt/SwissProt
Match: sp|P0CG50|UBC_MOUSE (Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 4.565e-7
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVKE 1070
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  LD+  +   K+VK+
Sbjct:  608 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLDVEPSVTTKKVKQ 712

[Close]

BLAST of SMED30022837 vs. UniProt/SwissProt
Match: sp|P46575|RL40_EIMBO (Ubiquitin-60S ribosomal protein L40 OS=Eimeria bovis OX=5803 PE=2 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 6.110e-7
Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG-METEKELSEEEF---YKVI-ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT DVE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG +E    L   ++    K+  + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLALLASKYNCEKKICRKCYARLPPRATNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. UniProt/SwissProt
Match: sp|P0DJ25|RL40_TETTS (Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=RPL40 PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 7.413e-7
Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLL-GGMETEKELSEEEF---YKVI-ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT DVE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L  GGME       +++    KV  + +  L   + N RK++ 
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGMEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKC 115

[Close]

BLAST of SMED30022837 vs. UniProt/SwissProt
Match: sp|P33190|RL40_TETPY (Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena pyriformis OX=5908 GN=TUF11 PE=3 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 7.413e-7
Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLL-GGMETEKELSEEEF---YKVI-ESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT DVE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L  GGME       +++    KV  + +  L   + N RK++ 
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGMEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKC 115

[Close]

BLAST of SMED30022837 vs. TrEMBL
Match: A0A4U0VRS2 (Uncharacterized protein OS=Rhodotorula sp. CCFEE 5036 OX=1965284 GN=B0A53_04967 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.579e-6
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 3

Query:  666 NEVENANN-ENLSGEEIYIGAKQQNVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTELLDLSENARKKEVK-EILEKDILEIDQ 1103
            N V+NAN  EN   E++ I      +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+         F K +   T  L++  +     VK +I +K+ +  DQ
Sbjct: 2015 NYVKNANKLENYLNEQLKIYVDPITMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI--------FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 2155

[Close]

BLAST of SMED30022837 vs. TrEMBL
Match: A0A3G4ZYU7 (Polyubiquitin OS=Gaeavirus sp. OX=2487767 GN=Gaeavirus10_2 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.947e-6
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM 965
             +QIF+K   G+TIT DVE   P+  +K+ I  +  +  + Q+L  NGKQ  D KT +D  + + ST+ L+  L GG+
Sbjct:   76 GMQIFVKTLQGKTITMDVEASDPIESVKQKIQDKEGIPADQQRLVYNGKQLEDGKTIADYGVQAESTVHLVLRLRGGI 153

[Close]

BLAST of SMED30022837 vs. TrEMBL
Match: A0A3Q0E4J7 (polyubiquitin-B OS=Tarsius syrichta OX=1868482 GN=UBB PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.337e-6
Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 3

Query:  603 VNRFTCKIKRNEVTTGESVKDNEVENANNENLS-GEEIYI----GAKQQNVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            V RF    K    T GE  +        N   + G+  +I    G K+  +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  172 VTRFESFRKSGPCTCGERGRLARAGTGTNRRFADGDPAFISEGEGGKEVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 299

[Close]

BLAST of SMED30022837 vs. TrEMBL
Match: A0A0N5C8Q1 (Ubiquitin-like domain-containing protein OS=Strongyloides papillosus OX=174720 PE=4 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 6.357e-6
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYK-----VIESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  IH++  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+     LS    Y        + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTVDNVKTKIHEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLLSLARSYNCDKQVCRKCYARLPPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. TrEMBL
Match: J9JSL8 (Uncharacterized protein OS=Acyrthosiphon pisum OX=7029 GN=100162143 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 7.504e-6
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIFIK  +G+TIT +VE  +P+ K+K  I +R     + Q+L  + KQ  D  T S+ NI   STI +++ L GGM+
Sbjct:    1 MQIFIKTLTGKTITLEVESSYPIEKVKVKIQEREGYPTDHQRLIFSDKQLIDGHTLSEYNIEKDSTIHVVFRLQGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 50.447 bits (119), Expect = 1.836e-7
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE---EFYKVIESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++   E     + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKC 115

[Close]

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM--ETEKELSEE---EFYKVIESWTELLDLSENARKKEV 1064
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+   + ++L+++   E     + +  L   + N RKK+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKC 115

[Close]

BLAST of SMED30022837 vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 51.2174 bits (121), Expect = 1.011e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   83 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 161

HSP 2 Score: 51.2174 bits (121), Expect = 1.011e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  159 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 237

[Close]

BLAST of SMED30022837 vs. Ensembl Cavefish
Match: nedd8l (NEDD8-like [Source:NCBI gene;Acc:103044361])

HSP 1 Score: 46.2098 bits (108), Expect = 2.215e-6
Identity = 24/68 (35.29%), Postives = 40/68 (58.82%), Query Frame = 3

Query:  759 SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +G+ I  D+E    + +IK+ + ++  +  + Q+L  +GKQ ND KT+SD  I  GS + L+  L GG
Sbjct:    9 TGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTASDYKIQGGSVLHLVLALRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043])

HSP 1 Score: 47.7506 bits (112), Expect = 2.418e-6
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 50.8322 bits (120), Expect = 3.113e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   89 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 167

HSP 2 Score: 50.8322 bits (120), Expect = 3.113e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  165 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 243

HSP 3 Score: 50.8322 bits (120), Expect = 3.113e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  241 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 319

HSP 4 Score: 50.8322 bits (120), Expect = 3.113e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  317 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 395

HSP 5 Score: 50.447 bits (119), Expect = 3.523e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   14 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 91

[Close]

BLAST of SMED30022837 vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 48.521 bits (114), Expect = 1.003e-7
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM 965
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77

[Close]

BLAST of SMED30022837 vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 48.521 bits (114), Expect = 1.003e-7
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM 965
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77

[Close]

BLAST of SMED30022837 vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 50.447 bits (119), Expect = 2.405e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.447 bits (119), Expect = 2.405e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.447 bits (119), Expect = 2.405e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.447 bits (119), Expect = 2.651e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 5 Score: 47.3654 bits (111), Expect = 2.235e-6
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  304 GMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

[Close]

BLAST of SMED30022837 vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 50.8322 bits (120), Expect = 7.293e-8
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 50.8322 bits (120), Expect = 2.458e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.447 bits (119), Expect = 2.746e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 3 Score: 46.2098 bits (108), Expect = 8.248e-6
Identity = 28/77 (36.36%), Postives = 42/77 (54.55%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+    GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

[Close]

BLAST of SMED30022837 vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 50.8322 bits (120), Expect = 5.780e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 2 Score: 50.8322 bits (120), Expect = 5.780e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 3 Score: 50.8322 bits (120), Expect = 5.780e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 4 Score: 50.8322 bits (120), Expect = 5.780e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 5 Score: 50.8322 bits (120), Expect = 5.780e-7
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 6 Score: 50.8322 bits (120), Expect = 6.535e-7
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

HSP 7 Score: 48.1358 bits (113), Expect = 5.067e-6
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:  456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532

[Close]

BLAST of SMED30022837 vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 47.7506 bits (112), Expect = 1.026e-6
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Medaka
Match: ubb (ubiquitin C [Source:NCBI gene;Acc:101172100])

HSP 1 Score: 52.7582 bits (125), Expect = 4.348e-7
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            N+QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  553 NMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 631

HSP 2 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:   76 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 154

HSP 3 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  152 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 230

HSP 4 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  228 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 306

HSP 5 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  304 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 382

HSP 6 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  380 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 458

HSP 7 Score: 50.8322 bits (120), Expect = 1.998e-6
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 3

Query:  735 NVQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
             +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:  629 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 707

HSP 8 Score: 50.8322 bits (120), Expect = 2.237e-6
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGME 968
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GGM+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 78

[Close]

BLAST of SMED30022837 vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 49.2914 bits (116), Expect = 4.936e-7
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGGM 965
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77

[Close]

BLAST of SMED30022837 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 47.7506 bits (112), Expect = 2.426e-6
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 48.1358 bits (113), Expect = 3.384e-6
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3

Query:  738 VQIFIKA-SGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            +QIF+K  +G+TIT +VE    +  +K  I  +  +  + Q+L   GKQ  D +T SD NI   ST+ L+  L GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30022837 vs. Ensembl Medaka
Match: ENSORLT00000033696.1 (pep primary_assembly:ASM223467v1:18:18100789:18102949:1 gene:ENSORLG00000024017.1 transcript:ENSORLT00000033696.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 44.669 bits (104), Expect = 7.378e-6
Identity = 24/73 (32.88%), Postives = 42/73 (57.53%), Query Frame = 3

Query:  744 IFIKASGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYNLLGG 962
            I +  +G+ I  D+E    + +IK+ + ++  +  + Q+L  +GKQ ND KT++D  I  GS + L+  L GG
Sbjct:    3 IKLTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGG 75

[Close]

BLAST of SMED30022837 vs. Planmine SMEST
Match: SMESG000010152.1 (SMESG000010152.1)

HSP 1 Score: 302.753 bits (774), Expect = 1.591e-98
Identity = 191/267 (71.54%), Postives = 204/267 (76.40%), Query Frame = 3

Query:  486 RLGSNETESPVGNSLIKPDXXXXXXXXPFSMKPRIEVSKVNRFTCKIKRNEVTTGESVKDNEVENANNENLSGEEIYIGAKQQNVQIFIKASGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGKQFNDNKTSSDNNITSGSTIFLLYN--------------LLGGMETEK-----ELSEEEFYKVIESWTELLDLSENARKKEVKEILEKDILEIDQ*KEKVD*LLENNAERACSNKDYKSRRSLNENHSM*SFKAFGK 1229
            RLGSNETESPVGNSLIKPDNK NKKNK FS+K RIEVSKVNRFT KIKRNEVTTGE VK NEVENANNENLSGEE  +G  QQNVQIFIKAS ETIT DVELQWP+SKIKKIIHQRG +SY SQKLYRNG+Q NDNKT  DN IT G TI  +                LL  + T+      E  EEEFYKVIESWT+LLD SE A KKEVKEILEKDI EIDQ  EKV  LLENNAERACS+KD+KS++ L EN SM SFK  GK
Sbjct:  170 RLGSNETESPVGNSLIKPDNKSNKKNKTFSVKKRIEVSKVNRFTFKIKRNEVTTGECVKVNEVENANNENLSGEENCMGVNQQNVQIFIKASEETITLDVELQWPISKIKKIIHQRGGVSYGSQKLYRNGEQLNDNKTLLDNFITKG-TIRRIKRCQSQKWRLTRKRNLLLAAISTDDCPKLVEEYEEEFYKVIESWTKLLDFSEKAVKKEVKEILEKDISEIDQKNEKVHQLLENNAERACSSKDFKSQKRLKENKSMESFKCLGK 435

[Close]

BLAST of SMED30022837 vs. Planmine SMEST
Match: SMESG000046963.1 (SMESG000046963.1)

HSP 1 Score: 201.83 bits (512), Expect = 1.315e-61
Identity = 110/131 (83.97%), Postives = 114/131 (87.02%), Query Frame = 3

Query:  486 RLGSNETESPVGNSLIKPDXXXXXXXXPFSMKPRIEVSKVNRFTCKIKRNEVTTGESVKDNEVENANNENLSGEEIYIGAKQQNVQIFIKASGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNGK 878
            RLGSNETESPVGNSLIKPD K NKKNK FSM  RIEVSKVN FT KIKRNEVTTGE VKDNEVENANN+NLSG+E  I AKQQNVQIFI ASG TIT DVELQWP+SKIKKIIHQRG MSY SQKLY NG+
Sbjct:   42 RLGSNETESPVGNSLIKPDKKSNKKNKTFSMTTRIEVSKVNIFTFKIKRNEVTTGECVKDNEVENANNKNLSGKENCISAKQQNVQIFISASGGTITLDVELQWPISKIKKIIHQRGGMSYGSQKLYHNGQ 172

[Close]

BLAST of SMED30022837 vs. Planmine SMEST
Match: SMESG000047744.1 (SMESG000047744.1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.319e-26
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 1

Query:  268 LKLSGFKSSANGTYNLPAVSENISENKNITIQIQKQNKEVKR*KAIKEKSAEESYQ 435
            LKLS FKSSANGTY L AV ENISEN+NITIQ QKQNKE+KR K IKEKSAE+SYQ
Sbjct:  188 LKLSEFKSSANGTYYLSAVYENISENENITIQEQKQNKELKRHKTIKEKSAEDSYQ 243

HSP 2 Score: 51.6026 bits (122), Expect = 4.319e-26
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 3

Query:  486 RLGSNETESPVGNSLIKPDXXXXXXXXPFSMKPRIEVSK 602
            R GSNET+S +GNSLIKPDNK NKKNK FSMK RIEVSK
Sbjct:  261 RFGSNETDSRLGNSLIKPDNKSNKKNKTFSMKTRIEVSK 299

HSP 3 Score: 84.7297 bits (208), Expect = 4.212e-18
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 1

Query:    4 GCPLLTFLR*KECTKVTSDGISEMAKSFSKVKFMNCN*VVQLITEN 141
            GCPLL FLR KEC KVTSDGISEMAKS+SKV+FMNCN V++LIT+N
Sbjct:    4 GCPLLAFLRLKECAKVTSDGISEMAKSWSKVRFMNCNYVIELITKN 49

[Close]

BLAST of SMED30022837 vs. Planmine SMEST
Match: SMESG000076360.1 (SMESG000076360.1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.298e-17
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 1

Query:    4 GCPLLTFLR*KECTKVTSDGISEMAKSFSKVKFMNCN*VVQLITENV 144
            GCPLLTFLR KEC KVTSDGISEMAKS+SKV+FMNCN VV+L TEN 
Sbjct:  100 GCPLLTFLRLKECIKVTSDGISEMAKSWSKVRFMNCNYVVELFTENA 146

[Close]

BLAST of SMED30022837 vs. Planmine SMEST
Match: SMESG000076365.1 (SMESG000076365.1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.161e-16
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1

Query:    4 GCPLLTFLR*KECTKVTSDGISEMAKSFSKVKFMNCN*VVQLITEN 141
            G PLLTFLR KEC KVTSDGISEMAKS+SKV+FMNCN VV+LITEN
Sbjct:  100 GGPLLTFLRLKECIKVTSDGISEMAKSWSKVRFMNCNYVVELITEN 145

The following BLAST results are available for this feature:

BLAST of SMED30022837 vs. Ensembl Human
BLAST of SMED30022837 vs. Ensembl Celegans
BLAST of SMED30022837 vs. Ensembl Fly
BLAST of SMED30022837 vs. Ensembl Zebrafish
BLAST of SMED30022837 vs. Ensembl Xenopus
BLAST of SMED30022837 vs. Ensembl Mouse
BLAST of SMED30022837 vs. UniProt/SwissProt
BLAST of SMED30022837 vs. TrEMBL
BLAST of SMED30022837 vs. Ensembl Cavefish
BLAST of SMED30022837 vs. Ensembl Sea Lamprey
BLAST of SMED30022837 vs. Ensembl Yeast
BLAST of SMED30022837 vs. Ensembl Nematostella
BLAST of SMED30022837 vs. Ensembl Medaka
BLAST of SMED30022837 vs. Planmine SMEST

BLAST of SMED30022837 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
UBB	1.546e-7	38.46	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
UBC	1.885e-7	38.46	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	2.667e-7	38.46	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	3.027e-7	38.46	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	3.956e-7	38.46	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]

BLAST of SMED30022837 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubq-2	1.910e-7	30.43	Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ...	[more]
ubq-1	9.767e-7	37.97	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	9.767e-7	37.97	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	1.014e-6	37.97	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	1.014e-6	37.97	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]

BLAST of SMED30022837 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CG11700	2.698e-8	33.60	gene:FBgn0029856 transcript:FBtr0333520	[more]
RpL40	3.271e-7	32.17	gene:FBgn0003941 transcript:FBtr0334787	[more]
RpL40	3.271e-7	32.17	gene:FBgn0003941 transcript:FBtr0077470	[more]
Ubi-p5E	1.396e-6	37.97	gene:FBgn0086558 transcript:FBtr0345892	[more]
Ubi-p5E	1.396e-6	37.97	gene:FBgn0086558 transcript:FBtr0070933	[more]

BLAST of SMED30022837 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	2.166e-7	31.30	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ubb	5.905e-7	37.18	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
ubb	7.519e-7	37.97	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
CR848813.2	1.163e-6	37.97	pep chromosome:GRCz11:CHR_ALT_CTG5_1_42:42047434:4...	[more]
UBB	1.668e-6	37.97	si:ch211-202a12.4 [Source:ZFIN;Acc:ZDB-GENE-030131...	[more]

BLAST of SMED30022837 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	3.855e-7	32.17	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSXETT00000033679.1	9.759e-7	37.97	ubiquitin C [Source:NCBI gene;Acc:448120]	[more]
pdcd11	3.497e-6	37.97	programmed cell death 11 [Source:Xenbase;Acc:XB-GE...	[more]
pdcd11	3.501e-6	37.97	programmed cell death 11 [Source:Xenbase;Acc:XB-GE...	[more]
rps27a	4.066e-6	38.16	ribosomal protein S27a [Source:NCBI gene;Acc:54892...	[more]

BLAST of SMED30022837 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Ubc	6.526e-8	33.63	ubiquitin C [Source:MGI Symbol;Acc:MGI:98889]	[more]
Ubc	6.526e-8	33.63	ubiquitin C [Source:MGI Symbol;Acc:MGI:98889]	[more]
Gm11808	2.920e-7	32.17	predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36...	[more]
Uba52	2.920e-7	32.17	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
Uba52	2.920e-7	32.17	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]

BLAST of SMED30022837 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P22589\|UBIQP_PHYIN	3.315e-7	33.60	Polyubiquitin OS=Phytophthora infestans OX=4787 PE...	[more]
sp\|P0CG50\|UBC_MOUSE	4.565e-7	33.63	Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE...	[more]
sp\|P46575\|RL40_EIMBO	6.110e-7	33.04	Ubiquitin-60S ribosomal protein L40 OS=Eimeria bov...	[more]
sp\|P0DJ25\|RL40_TETTS	7.413e-7	33.04	Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena...	[more]
sp\|P33190\|RL40_TETPY	7.413e-7	33.04	Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena...	[more]

BLAST of SMED30022837 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4U0VRS2	2.579e-6	32.89	Uncharacterized protein OS=Rhodotorula sp. CCFEE 5...	[more]
A0A3G4ZYU7	2.947e-6	38.46	Polyubiquitin OS=Gaeavirus sp. OX=2487767 GN=Gaeav...	[more]
A0A3Q0E4J7	4.337e-6	32.81	polyubiquitin-B OS=Tarsius syrichta OX=1868482 GN=...	[more]
A0A0N5C8Q1	6.357e-6	33.04	Ubiquitin-like domain-containing protein OS=Strong...	[more]
J9JSL8	7.504e-6	41.03	Uncharacterized protein OS=Acyrthosiphon pisum OX=...	[more]

BLAST of SMED30022837 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	1.836e-7	31.30	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	1.836e-7	31.30	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
si:ch211-202a12.4	1.011e-6	37.97	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
nedd8l	2.215e-6	35.29	NEDD8-like [Source:NCBI gene;Acc:103044361]	[more]
rps27a	2.418e-6	38.16	ribosomal protein S27a [Source:NCBI gene;Acc:10304...	[more]

BLAST of SMED30022837 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
UBB	3.113e-7	37.97	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]

BLAST of SMED30022837 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3


Match Name	E-value	Identity	Description
RPL40B	1.003e-7	37.66	Ubiquitin-ribosomal 60S subunit protein L40B fusio...	[more]
RPL40A	1.003e-7	37.66	Ubiquitin-ribosomal 60S subunit protein L40A fusio...	[more]
UBI4	2.405e-7	37.97	Ubiquitin; becomes conjugated to proteins, marking...	[more]

BLAST of SMED30022837 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4


Match Name	E-value	Identity	Description
EDO45561	7.293e-8	38.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32403	2.458e-7	37.97	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32547	5.780e-7	37.97	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48503	1.026e-6	38.16	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SMED30022837 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubb	4.348e-7	39.24	ubiquitin C [Source:NCBI gene;Acc:101172100]	[more]
uba52	4.936e-7	37.66	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
rps27a	2.426e-6	38.16	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
rps27a	3.384e-6	38.16	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000033696.1	7.378e-6	32.88	pep primary_assembly:ASM223467v1:18:18100789:18102...	[more]

BLAST of SMED30022837 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000010152.1	1.591e-98	71.54	SMESG000010152.1	[more]
SMESG000046963.1	1.315e-61	83.97	SMESG000046963.1	[more]
SMESG000047744.1	4.319e-26	82.14	SMESG000047744.1	[more]
SMESG000076360.1	2.298e-17	82.98	SMESG000076360.1	[more]
SMESG000076365.1	1.161e-16	84.78	SMESG000076365.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30022837 ID=SMED30022837|Name=SMED30022837|organism=Schmidtea mediterranea sexual|type=transcript|length=1230bp
GAAGGTTGCCCCTTGCTGACATTCCTTCGATGAAAAGAATGTACAAAAGT
AACAAGTGATGGGATTTCAGAGATGGCTAAGTCTTTCTCTAAAGTAAAAT
TTATGAATTGTAATTAAGTCGTACAATTAATCACAGAAAATGTCAGATGT
GGCAAATGGGTCATCATTTCAAGGAATAACAGCGTATGGTCATGAGAGTT
ATAGAATATCTCTTAAAATTGATGTCAAAATTAAATGTGTAATTAAAGTA
GCTGTCGTAAGGTGGGATTAAAACTTTCTGGATTTAAATCTAGTGCTAAC
GGAACTTATAATTTACCTGCTGTCTCTGAGAATATTAGTGAGAACAAAAA
TATTACTATTCAAATACAAAAACAGAATAAAGAAGTGAAAAGATAAAAAG
CTATCAAAGAAAAATCAGCAGAGGAATCATATCAAAAAATTGAAAAAACT
ATCAAAAAACTGAAAATTGAAATTAAAAACAATAAAGGTTGGGAAGCAAT
GAAACTGAATCTCCAGTTGGGAATTCATTGATAAAGCCCGACAACAAATA
AAATAAGAAAAATAAACCATTCTCTATGAAACCGAGAATTGAGGTTTCAA
AAGTAAATAGATTTACTTGTAAGATCAAACGTAACGAAGTGACAACTGGT
GAAAGTGTAAAAGACAATGAAGTAGAGAATGCTAACAATGAAAATTTGTC
AGGTGAAGAAATTTACATAGGTGCCAAACAACAAAATGTGCAAATATTTA
TTAAAGCATCAGGAGAAACCATCACACAAGATGTTGAGTTACAATGGCCG
ATGTCAAAAATCAAGAAAATAATTCACCAAAGAGGAGAGATGTCGTATGA
AAGCCAAAAACTATATCGTAATGGTAAACAATTTAATGATAACAAGACGT
CATCAGATAATAATATTACAAGTGGATCAACAATCTTCCTACTCTACAAT
CTGTTGGGGGGAATGGAAACTGAGAAGGAACTGTCAGAAGAGGAATTTTA
TAAAGTGATCGAAAGTTGGACTGAATTGTTAGATCTTAGTGAAAATGCCC
GGAAAAAGGAAGTCAAAGAGATTTTAGAAAAGGATATTTTGGAAATTGAT
CAGTAAAAGGAAAAGGTTGATTAATTACTGGAGAATAATGCGGAAAGAGC
ATGTAGTAACAAAGATTATAAATCGCGAAGAAGTTTAAATGAAAATCATA
GCATGTAATCCTTTAAAGCTTTTGGCAAAC

protein sequence of SMED30022837-orf-1

>SMED30022837-orf-1 ID=SMED30022837-orf-1|Name=SMED30022837-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=177bp
MKPRIEVSKVNRFTCKIKRNEVTTGESVKDNEVENANNENLSGEEIYIGA
KQQNVQIFIKASGETITQDVELQWPMSKIKKIIHQRGEMSYESQKLYRNG
KQFNDNKTSSDNNITSGSTIFLLYNLLGGMETEKELSEEEFYKVIESWTE
LLDLSENARKKEVKEILEKDILEIDQ*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin-like_dom
IPR029071	Ubiquitin-like_domsf

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding
GO:0002020	protease binding
GO:0003723	RNA binding

Vocabulary: **cellular component**
Term	Definition
GO:0005615	extracellular space
GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0043209	myelin sheath
GO:0070062	extracellular exosome

Vocabulary: **biological process**
Term	Definition
GO:0007219	Notch signaling pathway
GO:0007623	circadian rhythm
GO:0010992	ubiquitin homeostasis

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 55..125 e-value: 8.7E-12 score: 55.2
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 57..124 e-value: 6.0E-13 score: 48.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 55..129 score: 16.124
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 49..150 e-value: 5.1E-17 score: 63.4
None	No IPR available	PANTHER	PTHR10666:SF312	F15I1.3 PROTEIN-RELATED	coord: 34..134
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 34..134
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 55..129 e-value: 1.34338E-9 score: 50.1353
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 52..129