Heterogeneous nuclear ribonucleoprotein 27C
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Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30022694 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Match: DAZAP1 (DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]) HSP 1 Score: 160.614 bits (405), Expect = 7.793e-44 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM----------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Match: DAZAP1 (DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]) HSP 1 Score: 160.229 bits (404), Expect = 1.590e-43 Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM---------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 189
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Match: DAZAP1 (DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]) HSP 1 Score: 159.844 bits (403), Expect = 2.205e-43 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM----------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Match: DAZAP1 (DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]) HSP 1 Score: 159.844 bits (403), Expect = 2.570e-43 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM----------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Match: DAZAP1 (DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]) HSP 1 Score: 155.606 bits (392), Expect = 1.568e-42 Identity = 76/174 (43.68%), Postives = 111/174 (63.79%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ + + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNQKGPRSD------NSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 168
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Match: msi-1 (MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1 [Source:UniProtKB/TrEMBL;Acc:G5EFS2]) HSP 1 Score: 143.665 bits (361), Expect = 1.062e-38 Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSL-----KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T ++LR+YF +FG + +C+VM D T R+RGFG+I F + S+V VL H LDGK +D K + R + L K+F+GG+ E ++Q+F +G V D LM D+ QRHRGF FV FD + V ++ HF +NGK VE K +P
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPK---VAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQP 211 HSP 2 Score: 57.7658 bits (138), Expect = 5.745e-9 Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ E +R +F +FG V + +M D +R RGF F+ F D S V +++ ++GK ++ K P KLV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVT 131
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Match: hrp-1 (Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]) HSP 1 Score: 124.02 bits (310), Expect = 2.897e-31 Identity = 58/165 (35.15%), Postives = 101/165 (61.21%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+F+GGL+ T DD +R ++ QFG I D +VM D T RSRGFG++ F ++ V +++ PH++DGK VD K+ + +NR + +++V G+ D E+ + ++F+++G VT ++LD+ Q+ RGF FV FDD V + +++ +NG +++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA-VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187 HSP 2 Score: 61.6178 bits (148), Expect = 4.089e-10 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLM 658
KIFVGG+ + ++ +R+F+SQFG +TD+ +M D T +R RGF FV F ++ V + + ++GK V+ K P + + SE+N +T +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR---SESNVSTKRL 116 HSP 3 Score: 49.6766 bits (117), Expect = 3.267e-6 Identity = 18/74 (24.32%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQ 331
++++ G+ + +D L YF ++G++ +++D T + RGFG++ F + +V + + H+++G DV++
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Match: hrp-1 (Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]) HSP 1 Score: 124.02 bits (310), Expect = 2.897e-31 Identity = 58/165 (35.15%), Postives = 101/165 (61.21%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+F+GGL+ T DD +R ++ QFG I D +VM D T RSRGFG++ F ++ V +++ PH++DGK VD K+ + +NR + +++V G+ D E+ + ++F+++G VT ++LD+ Q+ RGF FV FDD V + +++ +NG +++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA-VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187 HSP 2 Score: 61.6178 bits (148), Expect = 4.089e-10 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLM 658
KIFVGG+ + ++ +R+F+SQFG +TD+ +M D T +R RGF FV F ++ V + + ++GK V+ K P + + SE+N +T +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR---SESNVSTKRL 116 HSP 3 Score: 49.6766 bits (117), Expect = 3.267e-6 Identity = 18/74 (24.32%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQ 331
++++ G+ + +D L YF ++G++ +++D T + RGFG++ F + +V + + H+++G DV++
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Match: hrp-1 (Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]) HSP 1 Score: 124.02 bits (310), Expect = 2.951e-31 Identity = 58/165 (35.15%), Postives = 101/165 (61.21%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+F+GGL+ T DD +R ++ QFG I D +VM D T RSRGFG++ F ++ V +++ PH++DGK VD K+ + +NR + +++V G+ D E+ + ++F+++G VT ++LD+ Q+ RGF FV FDD V + +++ +NG +++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA-VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187 HSP 2 Score: 61.6178 bits (148), Expect = 4.111e-10 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLM 658
KIFVGG+ + ++ +R+F+SQFG +TD+ +M D T +R RGF FV F ++ V + + ++GK V+ K P + + SE+N +T +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR---SESNVSTKRL 116 HSP 3 Score: 49.6766 bits (117), Expect = 3.277e-6 Identity = 18/74 (24.32%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQ 331
++++ G+ + +D L YF ++G++ +++D T + RGFG++ F + +V + + H+++G DV++
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Match: hrp-1 (Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]) HSP 1 Score: 124.02 bits (310), Expect = 2.951e-31 Identity = 58/165 (35.15%), Postives = 101/165 (61.21%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+F+GGL+ T DD +R ++ QFG I D +VM D T RSRGFG++ F ++ V +++ PH++DGK VD K+ + +NR + +++V G+ D E+ + ++F+++G VT ++LD+ Q+ RGF FV FDD V + +++ +NG +++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA-VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVR 187 HSP 2 Score: 61.6178 bits (148), Expect = 4.111e-10 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLM 658
KIFVGG+ + ++ +R+F+SQFG +TD+ +M D T +R RGF FV F ++ V + + ++GK V+ K P + + SE+N +T +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR---SESNVSTKRL 116 HSP 3 Score: 49.6766 bits (117), Expect = 3.277e-6 Identity = 18/74 (24.32%), Postives = 44/74 (59.46%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQ 331
++++ G+ + +D L YF ++G++ +++D T + RGFG++ F + +V + + H+++G DV++
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Match: Hrb27C (gene:FBgn0004838 transcript:FBtr0079348) HSP 1 Score: 165.622 bits (418), Expect = 1.334e-45 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.583e-12 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Match: Hrb27C (gene:FBgn0004838 transcript:FBtr0301404) HSP 1 Score: 165.622 bits (418), Expect = 1.334e-45 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.583e-12 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Match: Hrb27C (gene:FBgn0004838 transcript:FBtr0307030) HSP 1 Score: 165.622 bits (418), Expect = 1.334e-45 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.583e-12 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Match: Hrb27C (gene:FBgn0004838 transcript:FBtr0301403) HSP 1 Score: 165.622 bits (418), Expect = 1.334e-45 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.583e-12 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Match: Hrb27C (gene:FBgn0004838 transcript:FBtr0307031) HSP 1 Score: 165.622 bits (418), Expect = 1.334e-45 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.583e-12 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Match: dazap1 (DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]) HSP 1 Score: 157.918 bits (398), Expect = 4.255e-43 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH-MKGRNRRS--------------LKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+EIGK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVL+ PH LDG+ +D K C M+ R+ KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 7 GDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Match: dazap1 (DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]) HSP 1 Score: 157.918 bits (398), Expect = 4.519e-43 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH-MKGRNRRS--------------LKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+EIGK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVL+ PH LDG+ +D K C M+ R+ KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 7 GDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Match: dazap1 (DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]) HSP 1 Score: 158.688 bits (400), Expect = 9.175e-43 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH-MKGRNRRS--------------LKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+EIGK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVL+ PH LDG+ +D K C M+ R+ KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 19 GDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 202
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Match: msi2b (musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]) HSP 1 Score: 150.984 bits (380), Expect = 3.010e-41 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 57.7658 bits (138), Expect = 9.165e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Match: msi2b (musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]) HSP 1 Score: 153.295 bits (386), Expect = 4.141e-41 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 59.3066 bits (142), Expect = 5.524e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:448406]) HSP 1 Score: 163.31 bits (412), Expect = 2.637e-45 Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC--------------NIHMKG---RNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C KG N RS KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 191
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:448406]) HSP 1 Score: 162.925 bits (411), Expect = 3.785e-45 Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH-------------MKG---RNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C KG N RS KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:448406]) HSP 1 Score: 162.925 bits (411), Expect = 6.556e-45 Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC--------------NIHMKG---RNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C KG N RS KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 191
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:448406]) HSP 1 Score: 163.31 bits (412), Expect = 1.318e-44 Identity = 83/191 (43.46%), Postives = 115/191 (60.21%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC--------------NIHMKG---RNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C KG N RS KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 191
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:448406]) HSP 1 Score: 161.77 bits (408), Expect = 2.152e-44 Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH-------------MKG---RNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C KG N RS KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPREGWQKGPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Match: Dazap1 (DAZ associated protein 1 [Source:MGI Symbol;Acc:MGI:1917498]) HSP 1 Score: 159.458 bits (402), Expect = 1.973e-43 Identity = 80/189 (42.33%), Postives = 112/189 (59.26%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR---------------RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M A +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C R +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 189
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Match: Dazap1 (DAZ associated protein 1 [Source:MGI Symbol;Acc:MGI:1917498]) HSP 1 Score: 159.458 bits (402), Expect = 1.994e-43 Identity = 80/189 (42.33%), Postives = 112/189 (59.26%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR---------------RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M A +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C R +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 189
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Match: Dazap1 (DAZ associated protein 1 [Source:MGI Symbol;Acc:MGI:1917498]) HSP 1 Score: 159.073 bits (401), Expect = 2.879e-43 Identity = 80/190 (42.11%), Postives = 112/190 (58.95%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR----------------RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M A +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C R +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Match: Msi2 (musashi RNA-binding protein 2 [Source:MGI Symbol;Acc:MGI:1923876]) HSP 1 Score: 149.828 bits (377), Expect = 2.337e-40 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 56.225 bits (134), Expect = 4.248e-8 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Match: Msi2 (musashi RNA-binding protein 2 [Source:MGI Symbol;Acc:MGI:1923876]) HSP 1 Score: 148.673 bits (374), Expect = 4.347e-40 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 55.4546 bits (132), Expect = 5.900e-8 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Match: sp|P48809|RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster OX=7227 GN=Hrb27C PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.338e-44 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM--KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+E GK+F+GGLS T ++L YF +FG I DCVVM +N++GRSRGFG++ F + + V VL+ GPH LDG+ +D K CN K + K+F+GG+ + E +R FF+++G VT+V +M DQ K++ RGF F+ F++ES V+ + ++ +NGK VEIK EP
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP 173 HSP 2 Score: 68.5514 bits (166), Expect = 4.594e-11 Identity = 40/133 (30.08%), Postives = 64/133 (48.12%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTD--------VNLMLDQTKQ 484
KVF+GGL + LR +F+++G + + V+M D + +SRGFG++ F EES+V V E L+GK V++K+ G G + N T+ + + GN +N+M Q Q
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR------------DGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQ 217
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Match: sp|Q98SJ2|DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.762e-43 Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM-----------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M + G+EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N RS KIFVGGI + E ++++F++FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 191
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Match: sp|Q96EP5|DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.059e-42 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM----------------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M ++ +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C + N +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Match: sp|Q9JII5|DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.014e-42 Identity = 80/190 (42.11%), Postives = 112/190 (58.95%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR----------------RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
M A +EIGK+F+GGL +T ++LR+YF Q+G + DCV+M D T +SRGFG++KF + + V TVL PH LDG+ +D K C R +S KIFVGGI + E +R++F +FG VT+V ++ D KQR RGF F+ F+DE V + + HF + GK VE+K EP
Sbjct: 1 MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEP 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Match: sp|O94432|YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.188e-41 Identity = 78/167 (46.71%), Postives = 109/167 (65.27%), Query Frame = 2
Query: 101 EIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
E GK+FIGGL+ T DDSLR+YF+QFG + DC VM D+ TGRSRGFG++ F V V+ + H LDGKI+D K+ + ++ K+FVGG+ D EE R FF+QFG V D LM+D+ R RGF FV +++ES V+ + + ++T++GK VE+K P
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK-EHHLDGKIIDPKRAIP--REEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 324
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Match: A0A172RVM8 (DAZ-associated protein 1 (Fragment) OS=Schmidtea mediterranea OX=79327 GN=DAZAP1 PE=2 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 2.451e-175 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGH 799
MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGH
Sbjct: 1 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGH 240
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Match: A0A504Z6S5 (Heterogeneous nuclear ribonucleoprotein 27C OS=Fasciola gigantica OX=46835 GN=FGIG_03892 PE=4 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 5.682e-88 Identity = 134/183 (73.22%), Postives = 155/183 (84.70%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
MTDA+GNEIGK+F+GGLSQATN+ SLR YF +FG ++D VVMMDNKTGRSRGFGY+KFHE +V LE PH+LDGK VD KQCN++MKGRNRRSLKIFVGGIGLD + E+I+ +F QFG VTDVNLM+D KQRHRGFAFVGF+DE+VVK LI H+VTMN K VEIKAMEPPNF RK+ S
Sbjct: 1 MTDAEGNEIGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKFHESESVTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKIFVGGIGLDQDVESIKNYFKQFGRVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLIGLHYVTMNNKQVEIKAMEPPNFGRKIGS 183
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Match: A0A2H1CN11 (Heterogeneous nuclear ribonucleoprotein 27C OS=Fasciola hepatica OX=6192 GN=D915_002461 PE=4 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 6.168e-88 Identity = 134/183 (73.22%), Postives = 155/183 (84.70%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
MTDA+GNEIGK+F+GGLSQATN+ SLR YF +FG ++D VVMMDNKTGRSRGFGY+KFHE +V LE PH+LDGK VD KQCN++MKGRNRRSLKIFVGGIGLD + E+I+ +F QFG VTDVNLM+D KQRHRGFAFVGF+DE+VVK LI H+VTMN K VEIKAMEPPNF RK+ S
Sbjct: 1 MTDAEGNEIGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKFHESESVTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKIFVGGIGLDQDVESIKNYFKQFGRVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLIGLHYVTMNNKQVEIKAMEPPNFGRKISS 183
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Match: A0A183AFZ1 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS5876 PE=4 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.264e-87 Identity = 134/183 (73.22%), Postives = 155/183 (84.70%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
MTDA+GNEIGK+F+GGLSQATN+ SLR YF +FG ++D VVMMDNKTGRSRGFGY+KFHE +V LE PH+LDGK VD KQCN++MKGRNRRSLKIFVGGIGLD + E+I+ +F QFG VTDVNLM+D KQRHRGFAFVGF+DE+VVK LI H+VTMN K VEIKAMEPPNF RK+ S
Sbjct: 1 MTDAEGNEIGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKFHESDSVTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKIFVGGIGLDQDVESIKNYFKQFGRVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLIGLHYVTMNNKQVEIKAMEPPNFGRKIGS 183
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Match: A0A1S8X4J6 (Uncharacterized protein (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_02494 PE=4 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.789e-87 Identity = 130/181 (71.82%), Postives = 154/181 (85.08%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKL 622
MTDA+GNEIGK+F+GGLSQATN+ SLR YF +FG ++D VVMMDNKTGRSRGFGY+K+ E +V LE PH+LDGK VD KQCN++MKGRNRRSLK+FVGGIGLD + E+I+ +F QFG VTDVNLM+D KQRHRGFAFVGF+DE+VVK+LI H+VTMN K VEIKAMEPPNF RK+
Sbjct: 1 MTDAEGNEIGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESVTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKVFVGGIGLDQDAESIKNYFRQFGRVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKKLISLHYVTMNNKQVEIKAMEPPNFGRKI 181
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:103029889]) HSP 1 Score: 163.31 bits (412), Expect = 9.461e-45 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH---------------MKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+EIGK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVL+ PH LDG+ +D K C K + +S KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 19 GDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRAKDGWKGGKSDSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 202 HSP 2 Score: 63.929 bits (154), Expect = 1.430e-10 Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 2
Query: 89 ADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
+D N+ K+F+GG+ + LR+YF++FG + + V++ D + R RGFG+I F E +V + H + GK V+VK+
Sbjct: 119 SDSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKA 200
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:103029889]) HSP 1 Score: 163.696 bits (413), Expect = 1.211e-44 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH---------------MKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+EIGK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVL+ PH LDG+ +D K C K + +S KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 19 GDEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRAKDGWKGGKSDSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 202 HSP 2 Score: 63.929 bits (154), Expect = 1.574e-10 Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 2
Query: 89 ADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
+D N+ K+F+GG+ + LR+YF++FG + + V++ D + R RGFG+I F E +V + H + GK V+VK+
Sbjct: 119 SDSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKA 200
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Match: msi2a (RNA-binding protein Musashi homolog 2-like [Source:NCBI gene;Acc:103045937]) HSP 1 Score: 152.14 bits (383), Expect = 5.560e-41 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 58.9214 bits (141), Expect = 5.909e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Match: msi2a (RNA-binding protein Musashi homolog 2-like [Source:NCBI gene;Acc:103045937]) HSP 1 Score: 150.599 bits (379), Expect = 6.267e-41 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 57.7658 bits (138), Expect = 1.023e-8 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Match: msi2b (RNA-binding protein Musashi homolog 2 [Source:NCBI gene;Acc:103023867]) HSP 1 Score: 152.14 bits (383), Expect = 6.344e-41 Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF FV F++E VV+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLGQPHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 57.7658 bits (138), Expect = 1.251e-8 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004893.1 (pep scaffold:Pmarinus_7.0:GL479484:4:2056:-1 gene:ENSPMAG00000004449.1 transcript:ENSPMAT00000004893.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 133.65 bits (335), Expect = 2.354e-36 Identity = 68/176 (38.64%), Postives = 108/176 (61.36%), Query Frame = 2
Query: 86 DADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC----NIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
D + + K+F+GGLS T ++ LR YF+Q+GS+ DCVVM D ++ RSRGFG++ F S V + PH +DG++V+ K+ + G + KIFVGGI D +EE +R +F ++G + V +M ++ + RGFAFV F+D V +++V+ + T+NG + EI+ P
Sbjct: 4 DREPEQFRKLFVGGLSFETTEEGLRQYFEQWGSLTDCVVMKDTQSKRSRGFGFVTFSSMSEVDAAMSARPHKIDGRMVEPKRAVSREDSMRPGAHLSVKKIFVGGIKDDTDEEHLRDYFEKYGRIEIVEVMTERESGKKRGFAFVTFNDHDPVDKIVVQKYHTINGHNCEIRKALP 179
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Match: HNRNPA2B1 (heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:HGNC:5033]) HSP 1 Score: 129.413 bits (324), Expect = 1.065e-34 Identity = 65/167 (38.92%), Postives = 105/167 (62.87%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC---NIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
++ K+FIGGLS T ++SLR Y++Q+G+I DCVVM D + RSRGFG+I + V + ++ PH +DG++V+ K+ + G K+FVGGI + +E +R +FS+FG V V+++ D+ + RGFAFV FDD V +++ + F T+N +E++
Sbjct: 11 EQMRKLFIGGLSFETTEESLREYYEQWGTIVDCVVMKDPSSKRSRGFGFITYSVMEEVNSAMQARPHTVDGRVVEAKRAVPRDDSRPGIQVTVKKLFVGGIKDNTDESHLRDYFSKFGRVESVDMVTDKQTGKKRGFAFVTFDDYDPVDQIVFQKFHTINCHKLEVR 177 HSP 2 Score: 56.225 bits (134), Expect = 3.929e-9 Identity = 22/77 (28.57%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 104 IGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
+ K+F+GG+ T++ LR+YF +FG +E ++ D +TG+ RGF ++ F + V ++ + H ++ ++V++
Sbjct: 103 VKKLFVGGIKDNTDESHLRDYFSKFGRVESVDMVTDKQTGKKRGFAFVTFDDYDPVDQIVFQKFHTINCHKLEVRKA 179 HSP 3 Score: 53.5286 bits (127), Expect = 2.898e-8 Identity = 25/82 (30.49%), Postives = 47/82 (57.32%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFAR 616
K+F+GG+ + EE++R+++ Q+G + D +M D + +R RGF F+ + V + T++G+ VE K P + +R
Sbjct: 15 KLFIGGLSFETTEESLREYYEQWGTIVDCVVMKDPSSKRSRGFGFITYSVMEEVNSAMQARPHTVDGRVVEAKRAVPRDDSR 96
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Match: HNRNPA0 (heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]) HSP 1 Score: 132.494 bits (332), Expect = 1.081e-34 Identity = 64/164 (39.02%), Postives = 104/164 (63.41%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC----NIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+FIGGLS T ++S++ +F+Q+G++ DCVVM D T RSRGFG++ + V +E PH LDG++V+ K+ + G + + KIFVGGI + +E+ +R +FS++G V V++M D+ + RGF FV F D V +++V+ + T+NG E++
Sbjct: 34 KLFIGGLSFETTEESMQKHFEQWGTLTDCVVMRDPHTKRSRGFGFVTYMSAEEVDAAMEVRPHHLDGRVVEAKRAISREDSLKPGAHLKVKKIFVGGIKDNTDEDHLRDYFSEYGMVESVDVMEDRQSGKKRGFGFVTFSDHDAVDKVVVQKYHTINGHKAEVR 197 HSP 2 Score: 67.781 bits (164), Expect = 1.224e-12 Identity = 26/78 (33.33%), Postives = 50/78 (64.10%), Query Frame = 2
Query: 101 EIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
++ K+F+GG+ T++D LR+YF ++G +E VM D ++G+ RGFG++ F + V V+ + H ++G +V++
Sbjct: 122 KVKKIFVGGIKDNTDEDHLRDYFSEYGMVESVDVMEDRQSGKKRGFGFVTFSDHDAVDKVVVQKYHTINGHKAEVRKA 199
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Match: HNRNPA0 (heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]) HSP 1 Score: 127.872 bits (320), Expect = 1.683e-34 Identity = 65/164 (39.63%), Postives = 103/164 (62.80%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC---NIHMK-GRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIK 589
K+FIGGLS T +DS+R +F+Q+G++ DCVVM D T RSRGFG++ + V ++ PH LD ++V+ K+ +K G + + KIFVGGI D +E+ +R++F +G+V +M D++ + RGF FV F D V ++IV+ + T+NG E++
Sbjct: 10 KLFIGGLSFETTEDSMRKHFEQWGTLTDCVVMRDPHTKRSRGFGFVTYTCPEEVDAAMDARPHHLDNRVVEAKRAISREDSLKPGAHLKVKKIFVGGIRDDTDEQHLREYFQVYGDVEAAEVMEDRSTGKKRGFGFVTFSDHDTVDKVIVQKYHTINGHKAEVR 173 HSP 2 Score: 65.855 bits (159), Expect = 1.174e-12 Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 2
Query: 101 EIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
++ K+F+GG+ T++ LR YF +G +E VM D TG+ RGFG++ F + TV V+ + H ++G +V++
Sbjct: 98 KVKKIFVGGIRDDTDEQHLREYFQVYGDVEAAEVMEDRSTGKKRGFGFVTFSDHDTVDKVIVQKYHTINGHKAEVRKA 175
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Match: TARDBP (TAR DNA binding protein [Source:HGNC Symbol;Acc:HGNC:11571]) HSP 1 Score: 91.2781 bits (225), Expect = 2.127e-21 Identity = 62/171 (36.26%), Postives = 90/171 (52.63%), Query Frame = 2
Query: 113 VFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMK--GRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPP-NFAR 616
+ + GL ++ +R+YF FG + V D KTG S+GFG+++F + T VL + H++DG+ D K N + G RS KIFVG D + +RQFFSQFG VTDV + + R FAFV F D+ + + L + + G V I + EP +AR
Sbjct: 27 LIVLGLPWKASEQDIRDYFSTFGEVLMAQVKRDIKTGNSKGFGFVRFRDYETQLKVLAQ-RHMIDGRWCDCKLPNSKEQQVGDAFRSRKIFVGRCTEDITADDLRQFFSQFGEVTDVFI-----PKPFRAFAFVTFSDDQIAQGLCGEDLI-IKGTSVHISSAEPKFGYAR 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 138.658 bits (348), Expect = 5.069e-36 Identity = 68/170 (40.00%), Postives = 103/170 (60.59%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARK 619
K+FIGGL+ T +D+LR YF ++G++ D +M D TGRSRGFG++ F + S+V V++ H+LDGK++D K+ + ++ KIFVGGIG D + +FFSQ+G + D LMLD+ + RGF FV +D V + F+ + +EIK EP + +K
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRA--IPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQK 326 HSP 2 Score: 64.6994 bits (156), Expect = 1.331e-11 Identity = 28/81 (34.57%), Postives = 49/81 (60.49%), Query Frame = 2
Query: 359 RRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
+ S K+F+GG+ D E+ +R++F ++G VTD+ +M D R RGF F+ F+ S V E++ + ++GK ++ K P
Sbjct: 156 KESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI-LDGKVIDPKRAIP 235 HSP 3 Score: 57.7658 bits (138), Expect = 2.252e-9 Identity = 34/123 (27.64%), Postives = 57/123 (46.34%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLM 466
++ GK+F+GG+ +F Q+G+I D +M+D TG+SRGFG++ + V V + K +D K I +K R ++ G ++ + + FGN D N M
Sbjct: 240 DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN-------KFIDFKDRKIEIKRAEPRHMQQKSSNNGGNNGGNNMNRRGGNFGNQGDFNQM 355
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 64.6994 bits (156), Expect = 9.614e-12 Identity = 40/160 (25.00%), Postives = 76/160 (47.50%), Query Frame = 2
Query: 113 VFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMK-----GRNRRSLK-----------IFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELI 544
+F+G LS + +D+ L+ F+ G + V+ + T RSRG+GY+ F +S ++E + GK +D + N M G N R+ K +F+G + + + + I + F++ G V V + ++ +GF +V F + K+ +
Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE----MQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 325
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 61.6178 bits (148), Expect = 1.191e-10 Identity = 44/191 (23.04%), Postives = 87/191 (45.55%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHL-LDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELI-VRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNN 664
N +++G L + ++ L + F GS+ V D T S G+ Y+ F++ R +E+ + + G++ + R + S IF+ + D + + + FS FG++ + D+ + +GF FV F++E KE I + + +NG+ + + P+ +RK S+ T + N
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENG-KSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV----APHLSRKERDSQLEETKAHYTN 220
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Match: PUB1 (Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; implicated in regulation of translation; carries Q/N-rich domain at C- terminus, identified as candidate prion; human homolog Tia1 is critical for normal synaptic plasticity; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004961]) HSP 1 Score: 60.077 bits (144), Expect = 3.896e-10 Identity = 34/139 (24.46%), Postives = 71/139 (51.08%), Query Frame = 2
Query: 113 VFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRS-----LKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGF 514
+++G L +A +D L+ YF G I + +M+D K ++ + ++++H+ L+ L+GK ++ I+ ++++S +FVG + ++ ++ET+R F F + ++M D RG+ FV F
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQ----TLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSF 210
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Match: MIP6 (Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication [Source:SGD;Acc:S000001057]) HSP 1 Score: 50.8322 bits (120), Expect = 3.064e-7 Identity = 36/151 (23.84%), Postives = 70/151 (46.36%), Query Frame = 2
Query: 113 VFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPH-LLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFF---SQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRH 553
+FIG L ++ LR F ++ S E V D T +S G+GY+ F +++ + +E + + G+ V + + R +F + L++ + T R F+ ++GNV L +R + FV FD++ + +I ++
Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKIMPSMKNTLFRKNIGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSCLL------ERRKNIGFVYFDNDISARNVIKKY 257
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Match: EDO39879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8S5]) HSP 1 Score: 134.42 bits (337), Expect = 4.443e-37 Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVD-----VKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
K+FIGGLS T + LR +F++FG +++CVVM D T RSRGFG++ F + V VL G LDGK +D K+ M + KIF+GG+ + +EE ++++FSQFG +T+ LM D+ QRHRGF FV F+ E+ + + +N K VE+K +P
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKIDPKLAVPKRAPAKMVTTTK---KIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQP 166 HSP 2 Score: 51.9878 bits (123), Expect = 7.953e-8 Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSS 631
K+F+GG+ E +RQ F +FG + + +M D +R RGF F+ F D V ++ ++GK ++ K P K+V++
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKIDPKLAVPKRAPAKMVTT 87
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Match: EDO33389 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSE1]) HSP 1 Score: 125.561 bits (314), Expect = 4.513e-34 Identity = 62/163 (38.04%), Postives = 97/163 (59.51%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHM------KGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHV 580
K+F+GGL+ +T+ L+ YF+++G + DCV+M D T RSR FG+I F + S V+ V+++ PH LDGK++D K +G KIFVGG+ +++ + +F+ +G V VNLM+D Q+ RGF FV F+ + V + H+ +NGK V
Sbjct: 2 KIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMDDKPHQLDGKMIDPKPAVPRGPGQGPPQGNQNNEFKIFVGGLAHSTSKQDLEDYFTAYGKVVSVNLMVDPQTQKMRGFGFVTFESKDSVTKAADEHYHQINGKTV 164 HSP 2 Score: 54.299 bits (129), Expect = 8.586e-9 Identity = 27/77 (35.06%), Postives = 44/77 (57.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
KIFVGG+ + + ++ +F ++G VTD LM D +R R F F+ F D SVV+ ++ ++GK ++ K P
Sbjct: 2 KIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMDDKPHQLDGKMIDPKPAVP 78
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Match: EDO38417 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCX6]) HSP 1 Score: 122.479 bits (306), Expect = 2.081e-31 Identity = 62/170 (36.47%), Postives = 98/170 (57.65%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEE-GPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQ-FGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
++IGK+F+GGLS T +SL+ YF ++G + + MD TGR RGF +++F +S VL + PH+LDG+ +D K K + R KIFVGG+ + ++E IR++F + + V ++ + + + R RGF FV FD E V ++ F + G VE+K P
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAVLNQVDPHVLDGRTIDPKPAAPIGKPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALP 195
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Match: EDO49349 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG33]) HSP 1 Score: 110.153 bits (274), Expect = 3.152e-28 Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKG----RNRRSLKIFVGGIGLDDNEETIRQFFSQF------GNVTDVNLMLDQTK-QRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
K+FIGGL+ T ++ L++YF Q+G+I DCV+M + GRSRGFG++ + +V VL++ H+LD + ++ K+ + ++ KIFVGG+ EE I+++F+ G V DV+L D+ +R RGFAFV FD++ +V+++ + + K E+K EP
Sbjct: 1 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIM--KRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEP 173
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Match: EDO36522 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SIF0]) HSP 1 Score: 109.768 bits (273), Expect = 5.119e-28 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVL----EEGPHLLDGKIVDVKQC---NIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQF--GNVTDVNLML---DQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPN 607
K+F+GGL++ T +++LR YF+ +G + D VV+ D+ T +SRGFGY+ F + R VL E G H +DGK V+VK+ + + + ++ KIFVGG+ D +E I++ V V+L++ D+TK HRGFAFV ++E EL + + GK VE K P +
Sbjct: 14 AKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETK--HRGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPRD 190
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:101166783]) HSP 1 Score: 164.466 bits (415), Expect = 2.598e-45 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH---------------MKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+E+GK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVLE PH LDG+ +D K C K + +S KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 7 GDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 190 HSP 2 Score: 65.855 bits (159), Expect = 3.226e-11 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 2
Query: 83 TDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
+ AD N+ K+F+GG+ + LR+YF++FG + + V++ D + R RGFG+I F E +V + H + GK V+VK+
Sbjct: 105 SKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKA 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Match: dazap1 (DAZ associated protein 1 [Source:NCBI gene;Acc:101166783]) HSP 1 Score: 164.466 bits (415), Expect = 3.973e-45 Identity = 80/184 (43.48%), Postives = 113/184 (61.41%), Query Frame = 2
Query: 95 GNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIH---------------MKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
G+E+GK+F+GGL +T ++LRNYF Q+G + DCV+M D T +SRGFG++KF + + VRTVLE PH LDG+ +D K C K + +S KIFVGGI + E +R +F++FG VT+V ++ D KQR RGF F+ F+ E V + + HF + GK VE+K EP
Sbjct: 7 GDEVGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEP 190 HSP 2 Score: 65.855 bits (159), Expect = 3.754e-11 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 2
Query: 83 TDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQC 334
+ AD N+ K+F+GG+ + LR+YF++FG + + V++ D + R RGFG+I F E +V + H + GK V+VK+
Sbjct: 105 SKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKA 188
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Match: msi2a (musashi RNA binding protein 2 [Source:NCBI gene;Acc:101163923]) HSP 1 Score: 149.058 bits (375), Expect = 1.568e-40 Identity = 76/170 (44.71%), Postives = 106/170 (62.35%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF F+ F+ E +V+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 58.9214 bits (141), Expect = 3.949e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Match: msi2a (musashi RNA binding protein 2 [Source:NCBI gene;Acc:101163923]) HSP 1 Score: 150.599 bits (379), Expect = 2.508e-40 Identity = 76/170 (44.71%), Postives = 106/170 (62.35%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF F+ F+ E +V+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 59.6918 bits (143), Expect = 2.565e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Match: msi2a (musashi RNA binding protein 2 [Source:NCBI gene;Acc:101163923]) HSP 1 Score: 148.673 bits (374), Expect = 2.635e-40 Identity = 76/170 (44.71%), Postives = 106/170 (62.35%), Query Frame = 2
Query: 107 GKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNR-----RSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
GK+FIGGLS T+ DSLR+YF +FG I +C+VM D T RSRGFG++ F + ++V VL + H LD K +D K + R + R+ KIFVGG+ + E ++Q+F QFG V D LM D+T RHRGF F+ F+ E +V+++ HF +N K VE K +P
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPK---VAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187 HSP 2 Score: 58.9214 bits (141), Expect = 4.253e-9 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVS 628
K+F+GG+ + +++R +FS+FG + + +M D T +R RGF FV F D + V +++ + ++ K ++ K P K+V+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVT 107
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Match: SMESG000020492.1 (SMESG000020492.1) HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0 Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 2
Query: 80 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGHVANTPGVWANPYQFDKVPPNCVYQQQSVPCPHFHQCVPNPSQPMWGMLPSQSPSHWGYQVPLNNNPVYQYSPVPSNTWQYPYLFQYTPQVKTPANCNSEKSNMESQEMNKLNTSGISSRNDDNRQSNMTDSSHENMSQGYDSQNDCWIYNNKEINKLNMNSQISEPILQPNGDENLKMSYNAPLTDFNFFQSSY 1381
MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGHVANTPGVWANPYQFDKVPPNCVYQQQSVPCPHFHQCVPNPSQPMWGMLPSQSPSHWGYQVPLNNNPVYQYSPVPSNTWQYPYLFQYTPQVKTPANCNSEKSNMESQEMNKLNTSGISSRNDDNRQSNMTDSSHENMSQGYDSQNDCWIYNNKEINKLNMNSQISEPILQPNGDENLKMSYNAPLTDFNFFQSSY
Sbjct: 1 MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSPDQMSSDEKMLRIAPQYSLQPFIWSNASGHVANTPGVWANPYQFDKVPPNCVYQQQSVPCPHFHQCVPNPSQPMWGMLPSQSPSHWGYQVPLNNNPVYQYSPVPSNTWQYPYLFQYTPQVKTPANCNSEKSNMESQEMNKLNTSGISSRNDDNRQSNMTDSSHENMSQGYDSQNDCWIYNNKEINKLNMNSQISEPILQPNGDENLKMSYNAPLTDFNFFQSSY 434
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Match: SMESG000026342.1 (SMESG000026342.1) HSP 1 Score: 218.394 bits (555), Expect = 2.091e-66 Identity = 100/173 (57.80%), Postives = 132/173 (76.30%), Query Frame = 2
Query: 83 TDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVDVKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
TD GNEIGK+F+GGL Q+T +++L++YF +FG + + VMMD++TGRSRGFGY+++ E V V+ H L+GK +D K CN++MKGR+RR LKIFVGGI + NEET+R FF QFGN+T++ LM DQ+ RHRGFAFV FDDE+VVK+LI H +T+ K VEIK MEP
Sbjct: 3 TDDQGNEIGKLFVGGLHQSTTNETLKSYFSKFGEVVEASVMMDHRTGRSRGFGYVRYLENDGVIKVMST-KHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNEETLRDFFKQFGNITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIKPMEP 174
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Match: SMESG000071202.1 (SMESG000071202.1) HSP 1 Score: 145.206 bits (365), Expect = 6.636e-38 Identity = 80/205 (39.02%), Postives = 122/205 (59.51%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVD----VKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSP 712
K+F+GGL+ T ++L++YF QFG I++ +VM D RSRGFG++ F + S V VL++ H+LD K +D V + + + R+ KIF+GGI E IRQ+F+++G V + LM+D+ RHRGF FV F DE V +++ H+ +N K VE K P ++L+S T++ T N S +P IL N++SP
Sbjct: 38 KLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYSGVIKVLKQENHILDSKKIDPKLAVPKSICQPEKISARTKKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMVEAKKALP----KELLS--TSNATPKSENKSLQVPLAILQNNISP 236
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Match: SMESG000071202.1 (SMESG000071202.1) HSP 1 Score: 144.821 bits (364), Expect = 8.273e-38 Identity = 80/205 (39.02%), Postives = 122/205 (59.51%), Query Frame = 2
Query: 110 KVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVD----VKQCNIHMKGRNRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSLMNNPSASIPGMILCNSLSP 712
K+F+GGL+ T ++L++YF QFG I++ +VM D RSRGFG++ F + S V VL++ H+LD K +D V + + + R+ KIF+GGI E IRQ+F+++G V + LM+D+ RHRGF FV F DE V +++ H+ +N K VE K P ++L+S T++ T N S +P IL N++SP
Sbjct: 46 KLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYSGVIKVLKQENHILDSKKIDPKLAVPKSICQPEKISARTKKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMVEAKKALP----KELLS--TSNATPKSENKSLQVPLAILQNNISP 244
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Match: SMESG000077233.1 (SMESG000077233.1) HSP 1 Score: 139.043 bits (349), Expect = 1.156e-35 Identity = 71/196 (36.22%), Postives = 111/196 (56.63%), Query Frame = 2
Query: 98 NEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSRGFGYIKFHEESTVRTVLEEGPHLLDGKIVD------------VKQC---------NIHMKGR-------NRRSLKIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVRHFVTMNGKHVEIKAMEP 601
N+ GK+FIGGLS T+ +++R+YF ++G I++ ++M D T RSRGFG++ F E S+V+ VL + PH LD K +D K C N + G+ N ++ K+F+GGI + ++ + ++FSQFG + LM+D+ RHRGF FV F++E +++ HF +N K VE K P
Sbjct: 25 NDPGKMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFLESSSVKKVLNKTPHFLDSKKIDPKVAVPRKIESSTKNCDTSIDCLGINGYSSGKLSDSSLNNAKTKKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDSAEKVCDIHFHDLNNKTVEAKKALP 220 HSP 2 Score: 60.8474 bits (146), Expect = 1.313e-9 Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 2
Query: 371 KIFVGGIGLDDNEETIRQFFSQFGNVTDVNLMLDQTKQRHRGFAFVGFDDESVVKELIVR--HFVTMNGKHVEIKAMEPPNFARKLVSSETNSTTSL 655
K+F+GG+ + ET+R +F ++G++ + +M D +R RGF FV F + S VK+++ + HF ++ K ++ K P RK+ SS N TS+
Sbjct: 29 KMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFLESSSVKKVLNKTPHF--LDSKKIDPKVAVP----RKIESSTKNCDTSI 119 The following BLAST results are available for this feature:
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Heterogeneous nuclear ribonucleoprotein 27C vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30022694 ID=SMED30022694|Name=Heterogeneous nuclear ribonucleoprotein 27C|organism=Schmidtea mediterranea sexual|type=transcript|length=1511bpback to top protein sequence of SMED30022694-orf-1 >SMED30022694-orf-1 ID=SMED30022694-orf-1|Name=SMED30022694-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=435bp MTDADGNEIGKVFIGGLSQATNDDSLRNYFDQFGSIEDCVVMMDNKTGRSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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