SMED30022586

Overview
NameSMED30022586
Smed IDSMED30022586
Length (bp)1214
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30022586 (SMED30022586) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30022586 (SMED30022586) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30022586 (SMED30022586) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30022586 (SMED30022586) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30022586

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
epidermisSMED30022586SMESG000035473.1 dd_Smed_v4_23389_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Category 2 cellSMED30022586SMESG000035473.1 dd_Smed_v4_23389_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30022586 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.006980:10409..12270 -5917
Homology
[Close]
BLAST of SMED30022586 vs. Ensembl Human
Match: SYT14 (synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:23143])

HSP 1 Score: 52.373 bits (124), Expect = 1.029e-6
Identity = 38/133 (28.57%), Postives = 67/133 (50.38%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS++     P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  383 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 514
[Close]
BLAST of SMED30022586 vs. Ensembl Human
Match: SYT14 (synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:23143])

HSP 1 Score: 52.373 bits (124), Expect = 1.029e-6
Identity = 38/133 (28.57%), Postives = 67/133 (50.38%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS++     P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  383 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 514
[Close]
BLAST of SMED30022586 vs. Ensembl Human
Match: SYT14 (synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:23143])

HSP 1 Score: 52.373 bits (124), Expect = 1.107e-6
Identity = 38/133 (28.57%), Postives = 67/133 (50.38%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS++     P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 552
[Close]
BLAST of SMED30022586 vs. Ensembl Human
Match: SYT14 (synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:23143])

HSP 1 Score: 50.447 bits (119), Expect = 4.497e-6
Identity = 40/152 (26.32%), Postives = 68/152 (44.74%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN--QNQTPLNTFCVVELFKTHTLYMTYKTSVKFN---------SNC----------PIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N   N+ P   FC ++      +Y+   T VK           S C          P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  711 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNGLFCCLKHLIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 861
[Close]
BLAST of SMED30022586 vs. Ensembl Human
Match: SYT14 (synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:23143])

HSP 1 Score: 50.447 bits (119), Expect = 4.857e-6
Identity = 40/152 (26.32%), Postives = 68/152 (44.74%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN--QNQTPLNTFCVVELFKTHTLYMTYKTSVKFN---------SNC----------PIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N   N+ P   FC ++      +Y+   T VK           S C          P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNGLFCCLKHLIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 571
[Close]
BLAST of SMED30022586 vs. Ensembl Zebrafish
Match: syt5a (synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110])

HSP 1 Score: 59.3066 bits (142), Expect = 3.296e-9
Identity = 39/136 (28.68%), Postives = 70/136 (51.47%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+   + +LTV + E +N    +   L + F  + L          KT+VK N+  P +NE+F F I  A++   ++++ITVY+ ++  +N PIGK +       +  RHW+++  N    +   H+L+
Sbjct:  262 GDICISLRYVPTSGKLTVCIMEAKNLKKMDVGGLSDPFVKIVLQHNGKRIKKKKTTVKQNTLNPYFNESFSFEIPFAQI-QKVQVLITVYDYDKLGSNDPIGKCWIGFGASGVGLRHWSDMLANPRRPVAQWHTLQ 396
[Close]
BLAST of SMED30022586 vs. Ensembl Zebrafish
Match: syt4 (synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297])

HSP 1 Score: 54.6842 bits (130), Expect = 1.129e-7
Identity = 37/148 (25.00%), Postives = 70/148 (47.30%), Query Frame = 2 
Query:  767 NLFQNNVKLSNGTLEIGLRFDHKNTQ--LTVNVYEGQNFSNQNQT-PLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            ++ + N++ S G  E+ L   +++T   LTV V + ++    + + P + +  V LF+        KT VK  +  P++NE F+F +   +      + + + + + T+  P IG+L   +S       HW EI  +   QI   H+L
Sbjct:  289 DIIKKNIRRSAGRGELLLSLCYQSTTSTLTVVVLKARHLPKADSSGPSDPYVKVNLFQGKKRVCKKKTHVKKCAPNPVFNELFVFDLPSEDGLRDTSVELLLLDSDRTSRTPVIGRLVLGTSSPGTAGEHWREICDHPRRQIAKWHAL 436
[Close]
BLAST of SMED30022586 vs. Ensembl Zebrafish
Match: syt14a (synaptotagmin XIVa [Source:ZFIN;Acc:ZDB-GENE-090313-200])

HSP 1 Score: 51.2174 bits (121), Expect = 1.493e-6
Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            +GL ++    +L+V V +G +F N     P NT+  + L  +    M+  KTSV      P + ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   HSL
Sbjct:  409 LGLVYNATTGRLSVEVIKGSHFKNLAANKPPNTYVKLTLLNSMGQEMSKCKTSVCRGQPNPTYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELTHWTEMKESKGQQVCRWHSL 540
[Close]
BLAST of SMED30022586 vs. Ensembl Zebrafish
Match: syt16 (synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210])

HSP 1 Score: 48.1358 bits (113), Expect = 2.493e-6
Identity = 37/139 (26.62%), Postives = 71/139 (51.08%), Query Frame = 2 
Query:  794 SNGTLEIGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYN-ENETANLPIGKLFFPS-SEMALETRHWNEIHTNSNLQIRMLHSL 1198
             N  L +GL ++    +L+V + +G +F N     P +TF  + L  +    ++  KTS++ +   P++ ETF+F + L +L++ + L++++YN  N      IG +     S    E  HW ++  + N Q+   H+L
Sbjct:   24 GNPELLLGLSYNATTGRLSVEIIKGSHFRNFAVNRPPDTFGKLTLLNSMGQEISRCKTSIRRSQPNPVFKETFVFQVALFQLSD-VTLMVSIYNRRNMKRKEMIGWVALGQNSSGEEELLHWQDMKESGNQQVCRWHTL 161
[Close]
BLAST of SMED30022586 vs. Ensembl Zebrafish
Match: syt14a (synaptotagmin XIVa [Source:ZFIN;Acc:ZDB-GENE-090313-200])

HSP 1 Score: 50.447 bits (119), Expect = 2.596e-6
Identity = 41/152 (26.97%), Postives = 68/152 (44.74%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN--QNQTPLNTFCVVELFKTHTLYMTYKTSVKFN---------SNC----------PIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            +GL ++    +L+V V +G +F N   N+ P   FC ++      +Y+   T VK           S C          P + ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   HSL
Sbjct:  347 LGLVYNATTGRLSVEVIKGSHFKNLAANKPPNGLFCCLKHLIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSVCRGQPNPTYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELTHWTEMKESKGQQVCRWHSL 497
[Close]
BLAST of SMED30022586 vs. Ensembl Xenopus
Match: syt8 (synaptotagmin 8 [Source:NCBI gene;Acc:100037878])

HSP 1 Score: 53.9138 bits (128), Expect = 2.439e-7
Identity = 36/136 (26.47%), Postives = 66/136 (48.53%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+   + +LT+ + E +N    +     + +  V L      +   KT+VK ++  P +NE+F F + L ++ N + LII+V++ ++   N  IGKLF          RHW+++  +    I   H L+
Sbjct:  238 GDICFSLRYVPSSGKLTIIILEAKNLKRMDSDGFSDPYVKVHLALNRKKWKRKKTAVKKSTLKPYFNESFTFDVSLEQMKN-LDLIISVWDHDKVGKNEQIGKLFLGCRASGNALRHWSDMLAHPRRPIAQWHKLQ 372
[Close]
BLAST of SMED30022586 vs. Ensembl Xenopus
Match: SYT14 (synaptotagmin 14 [Source:NCBI gene;Acc:100491102])

HSP 1 Score: 51.6026 bits (122), Expect = 2.144e-6
Identity = 38/133 (28.57%), Postives = 67/133 (50.38%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS++   + P++ ETFIF + L +L+  + LI++VYN+        IG +    +S    +  HW E+  +   Q+   H+L
Sbjct:  659 IGLLYNATTGRLSAEVIKGSHFKNLSANRPPNTYVKLTLMNSMGQEMSKCKTSIRRGQSNPLYKETFIFQVALFQLS-EVTLILSVYNKRSMKRKELIGWISLGLNSSGDEQLNHWTEMKESKGQQVCRWHTL 790
[Close]
BLAST of SMED30022586 vs. Ensembl Xenopus
Match: SYT14 (synaptotagmin 14 [Source:NCBI gene;Acc:100491102])

HSP 1 Score: 51.2174 bits (121), Expect = 2.461e-6
Identity = 38/133 (28.57%), Postives = 68/133 (51.13%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N +   P NT+  + L  +    M+  KTS++   + P++ ETFIF + L +L+  + LI++VYN+        IG +    +S    +  HW E+  +   Q+   H+L
Sbjct:  396 IGLLYNATTGRLSAEVIKGSHFKNLSANRPPNTYVKLTLMNSMGQEMSKCKTSIRRGQSNPLYKETFIFQVALFQLS-EVTLILSVYNKRSMKRKELIGWISLGLNSSGDEQLNHWTEMKESKGQQVCRWHTL 527
[Close]
BLAST of SMED30022586 vs. Ensembl Xenopus
Match: SYT14 (synaptotagmin 14 [Source:NCBI gene;Acc:100491102])

HSP 1 Score: 50.8322 bits (120), Expect = 2.587e-6
Identity = 38/133 (28.57%), Postives = 68/133 (51.13%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N +   P NT+  + L  +    M+  KTS++   + P++ ETFIF + L +L+  + LI++VYN+        IG +    +S    +  HW E+  +   Q+   H+L
Sbjct:  412 IGLLYNATTGRLSAEVIKGSHFKNLSANRPPNTYVKLTLMNSMGQEMSKCKTSIRRGQSNPLYKETFIFQVALFQLS-EVTLILSVYNKRSMKRKELIGWISLGLNSSGDEQLNHWTEMKESKGQQVCRWHTL 543
[Close]
BLAST of SMED30022586 vs. Ensembl Xenopus
Match: SYT14 (synaptotagmin 14 [Source:NCBI gene;Acc:100491102])

HSP 1 Score: 50.447 bits (119), Expect = 3.924e-6
Identity = 38/133 (28.57%), Postives = 68/133 (51.13%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N +   P NT+  + L  +    M+  KTS++   + P++ ETFIF + L +L+  + LI++VYN+        IG +    +S    +  HW E+  +   Q+   H+L
Sbjct:  372 IGLLYNATTGRLSAEVIKGSHFKNLSANRPPNTYVKLTLMNSMGQEMSKCKTSIRRGQSNPLYKETFIFQVALFQLS-EVTLILSVYNKRSMKRKELIGWISLGLNSSGDEQLNHWTEMKESKGQQVCRWHTL 503
[Close]
BLAST of SMED30022586 vs. Ensembl Mouse
Match: Syt14 (synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490])

HSP 1 Score: 52.373 bits (124), Expect = 9.124e-7
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS +     P++ ETF+F + L +L++ + LI++VYN         IG +    +S    E RHW  +  +   Q+   H+L
Sbjct:  704 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNRRSMKRKEMIGWISLGLNSSGEEELRHWTAMKESKGQQVCRWHAL 835
[Close]
BLAST of SMED30022586 vs. Ensembl Mouse
Match: Syt14 (synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490])

HSP 1 Score: 51.9878 bits (123), Expect = 9.296e-7
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS +     P++ ETF+F + L +L++ + LI++VYN         IG +    +S    E RHW  +  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNRRSMKRKEMIGWISLGLNSSGEEELRHWTAMKESKGQQVCRWHAL 552
[Close]
BLAST of SMED30022586 vs. Ensembl Mouse
Match: Syt14 (synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490])

HSP 1 Score: 50.8322 bits (120), Expect = 1.972e-6
Identity = 40/152 (26.32%), Postives = 67/152 (44.08%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN--QNQTPLNTFCVVELFKTHTLYMTYKTSVKFN---------SNC----------PIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N   N+ P   FC ++      +Y+   T VK           S C          P++ ETF+F + L +L++ + LI++VYN         IG +    +S    E RHW  +  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNGLFCCLKHLIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNRRSMKRKEMIGWISLGLNSSGEEELRHWTAMKESKGQQVCRWHAL 571
[Close]
BLAST of SMED30022586 vs. Ensembl Mouse
Match: Syt2 (synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666])

HSP 1 Score: 48.9062 bits (115), Expect = 7.705e-6
Identity = 38/136 (27.94%), Postives = 67/136 (49.26%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+     +LTV + E +N    +   L + +  + L +        KT+VK  +  P +NE+F F I   ++   +++++TV + ++   N  IGK+F  S+    E RHW+++  N    I   HSLK
Sbjct:  275 GDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQI-QKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLK 409
[Close]
BLAST of SMED30022586 vs. Ensembl Mouse
Match: Syt2 (synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666])

HSP 1 Score: 48.9062 bits (115), Expect = 7.705e-6
Identity = 38/136 (27.94%), Postives = 67/136 (49.26%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+     +LTV + E +N    +   L + +  + L +        KT+VK  +  P +NE+F F I   ++   +++++TV + ++   N  IGK+F  S+    E RHW+++  N    I   HSLK
Sbjct:  275 GDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQI-QKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGTELRHWSDMLANPRRPIAQWHSLK 409
[Close]
BLAST of SMED30022586 vs. UniProt/SwissProt
Match: sp|Q58G82|SY14L_HUMAN (Putative synaptotagmin-14-like protein OS=Homo sapiens OX=9606 GN=SYT14P1 PE=5 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 1.660e-8
Identity = 36/131 (27.48%), Postives = 67/131 (51.15%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            I L ++  N +L+  V +G +  N     P NT+  + L K+    M+  K S++     P++ ETF+F + L +L+ H+ L+++VYN++      IG ++   +    E  HW E+  +   Q+R   +L
Sbjct:   55 ISLLYNATNGRLSAEVIKGSHLKNWAANRPPNTYVKLTLRKSTDQEMSKCKISIRRGRPNPVYKETFVFKVTLFQLS-HVTLMLSVYNKSSMRRKMIGWIYLGLNSSGEELNHWTEMKESKGRQVRRWQAL 184
[Close]
BLAST of SMED30022586 vs. UniProt/SwissProt
Match: sp|Q8NB59|SYT14_HUMAN (Synaptotagmin-14 OS=Homo sapiens OX=9606 GN=SYT14 PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 5.314e-6
Identity = 38/133 (28.57%), Postives = 67/133 (50.38%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS++     P++ ETF+F + L +L++ + LI++VYN+        IG +    +S    E  HW E+  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWHAL 552
[Close]
BLAST of SMED30022586 vs. UniProt/SwissProt
Match: sp|Q7TN84|SYT14_MOUSE (Synaptotagmin-14 OS=Mus musculus OX=10090 GN=Syt14 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 6.502e-6
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 2 
Query:  812 IGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMT-YKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFP-SSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            IGL ++    +L+  V +G +F N     P NT+  + L  +    M+  KTS +     P++ ETF+F + L +L++ + LI++VYN         IG +    +S    E RHW  +  +   Q+   H+L
Sbjct:  421 IGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSTRRGQPNPVYKETFVFQVALFQLSD-VTLILSVYNRRSMKRKEMIGWISLGLNSSGEEELRHWTAMKESKGQQVCRWHAL 552
[Close]
BLAST of SMED30022586 vs. UniProt/SwissProt
Match: sp|Q5R4J5|SYT1_PONAB (Synaptotagmin-1 OS=Pongo abelii OX=9601 GN=SYT1 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 7.761e-6
Identity = 33/136 (24.26%), Postives = 67/136 (49.26%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+     +LTV + E +N    +   L + +  + L +        +T++K N+  P +NE+F F +   ++   +++++TV + ++   N  IGK+F   +    E RHW+++  N    I   H+L+
Sbjct:  272 GDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKETTIKKNTLNPYYNESFSFEVPFEQI-QKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 406
[Close]
BLAST of SMED30022586 vs. TrEMBL
Match: A0A3B5LWY3 (Synaptotagmin Va OS=Xiphophorus couchianus OX=32473 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.021e-8
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            G + I LR+     +LTVNV E +N    +   L+ F  V L          KTSVK N+  P +NE+F F I  +++   I+++ITVY+ ++  +N PIGK +       +  RHW+++  N    I   H+L
Sbjct:  250 GDICISLRYVPTAGKLTVNVMEAKNLKKMDVGGLSPFVKVVLQHNGKRLKKKKTSVKQNTLNPYFNESFSFEIPFSQI-QKIQVLITVYDYDKLGSNDPIGKCWIGYGASGVGLRHWSDMLANPRRPIAQWHTL 382
[Close]
BLAST of SMED30022586 vs. TrEMBL
Match: A0A3B4TUI2 (Synaptotagmin Va OS=Seriola dumerili OX=41447 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.222e-8
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            G + I LR+     +LTVN+ E +N    +   L+ F  V L          KTSVK N+  P +NE+F F I  +++   I+++ITVY+ ++  +N PIGK +       +  RHW+++  N    +   H+L
Sbjct:  252 GDICISLRYVPTAGKLTVNIMEAKNLKKMDVGGLSPFVKVVLQHNGKRLKKKKTSVKQNTLNPYFNESFSFEIPFSQI-QKIQVLITVYDYDKLGSNDPIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTL 384
[Close]
BLAST of SMED30022586 vs. TrEMBL
Match: A0A1A8IPL8 (Synaptotagmin Va (Fragment) OS=Nothobranchius kuhntae OX=321403 GN=SYT5A PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.181e-7
Identity = 42/136 (30.88%), Postives = 70/136 (51.47%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+     +LTVN+ E +N    +   L + F  V L          KTSVK N+  P +NE+F F I  +++   ++L+ITVY+ ++  +N PIGK +       +  RHW+++  N    +   H+L+
Sbjct:  100 GDICISLRYVPTAGKLTVNIMEAKNLKKMDVGGLSDPFVKVVLQHNGKRIKKKKTSVKQNTLNPYFNESFSFEIPFSQI-QKVQLLITVYDYDKLGSNDPIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTLQ 234
[Close]
BLAST of SMED30022586 vs. TrEMBL
Match: A0A091K1E2 (Synaptotagmin-1 (Fragment) OS=Colius striatus OX=57412 GN=N325_05640 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.981e-7
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+     +LTV + E +     +   L + F  V L      +    TSVK N+  P +NE F+F +  +++ N + ++I+V++ ++ T N PIGKLF        + RHW+++ +N    +   HSL+
Sbjct:  144 GEICFSLRYVPSTGKLTVLILEAKKLKRMDSHGLSDPFVKVHLILNRKKWKKKTTSVKKNTLSPYFNEVFVFEVPFSQIQN-VDVVISVWDHDKVTKNEPIGKLFLGCRATGNQLRHWSDMLSNPRRPLAQWHSLQ 278
[Close]
BLAST of SMED30022586 vs. TrEMBL
Match: A0A1V4JP12 (Synaptotagmin-8 OS=Patagioenas fasciata monilis OX=372326 GN=SYT8 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.492e-7
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G +   LR+     +LTV + E +     +   L + F  V L      +    TSVK N+  P +NE F+F +  +++ N + ++I+V++ ++ T N PIGKLF        + RHW+++ +N    +   HSL+
Sbjct:  241 GEICFSLRYVPSTGKLTVLILEAKKLKRMDSHGLSDPFVKVHLILNRKKWKKKTTSVKKNTLSPYFNEVFVFEVPFSQIQN-VDMVISVWDHDKVTKNEPIGKLFLGCQATGNQLRHWSDMLSNPRRPLAQWHSLQ 375
[Close]
BLAST of SMED30022586 vs. Ensembl Cavefish
Match: syt5a (synaptotagmin-2-like [Source:NCBI gene;Acc:103027827])

HSP 1 Score: 57.3806 bits (137), Expect = 1.069e-8
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+   + +LTV + E +N    +   L + F  V L          KT+VK N+  P +NE+F F I  A++   I+++ITVY+ ++  +N  IGK +       +  RHW+++  N    +   H+L+
Sbjct:  261 GDICISLRYVPTSGKLTVCIMEAKNLKKMDVGGLSDPFVKVVLQHNGKRLKKKKTTVKQNTLNPYFNESFSFEIPFAQI-QKIQVLITVYDYDKLGSNDAIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTLQ 395
[Close]
BLAST of SMED30022586 vs. Ensembl Cavefish
Match: syt5a (synaptotagmin-2-like [Source:NCBI gene;Acc:103027827])

HSP 1 Score: 57.3806 bits (137), Expect = 1.144e-8
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+   + +LTV + E +N    +   L + F  V L          KT+VK N+  P +NE+F F I  A++   I+++ITVY+ ++  +N  IGK +       +  RHW+++  N    +   H+L+
Sbjct:  256 GDICISLRYVPTSGKLTVCIMEAKNLKKMDVGGLSDPFVKVVLQHNGKRLKKKKTTVKQNTLNPYFNESFSFEIPFAQI-QKIQVLITVYDYDKLGSNDAIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTLQ 390
[Close]
BLAST of SMED30022586 vs. Ensembl Cavefish
Match: syt4 (synaptotagmin 4 [Source:NCBI gene;Acc:103045953])

HSP 1 Score: 55.4546 bits (132), Expect = 5.629e-8
Identity = 38/148 (25.68%), Postives = 69/148 (46.62%), Query Frame = 2 
Query:  767 NLFQNNVKLSNGTLEIGLRFDHKNTQ--LTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            ++ + NV+ + G  E+ L   +++T   LTV V + ++    +   P + +  V L++        KT VK  +  P++NE F+F +   E      + + + + + TA  P IG+L   +S       HW EI  +   QI   H+L
Sbjct:  294 DIIKKNVRRTTGRGELLLSLCYQSTTSTLTVVVLKARHLPKTDPNGPSDPYVKVNLYQGKKRVCKKKTHVKKCAPNPVFNELFVFDVPSEEGLRDTSVELLLLDSDRTARTPLIGRLLLGTSSPGTPGEHWREICDHPRRQIAKWHAL 441
[Close]
BLAST of SMED30022586 vs. Ensembl Cavefish
Match: syt4 (synaptotagmin 4 [Source:NCBI gene;Acc:103045953])

HSP 1 Score: 55.4546 bits (132), Expect = 5.819e-8
Identity = 38/148 (25.68%), Postives = 69/148 (46.62%), Query Frame = 2 
Query:  767 NLFQNNVKLSNGTLEIGLRFDHKNTQ--LTVNVYEGQNFSNQNQ-TPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLP-IGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            ++ + NV+ + G  E+ L   +++T   LTV V + ++    +   P + +  V L++        KT VK  +  P++NE F+F +   E      + + + + + TA  P IG+L   +S       HW EI  +   QI   H+L
Sbjct:  288 DIIKKNVRRTTGRGELLLSLCYQSTTSTLTVVVLKARHLPKTDPNGPSDPYVKVNLYQGKKRVCKKKTHVKKCAPNPVFNELFVFDVPSEEGLRDTSVELLLLDSDRTARTPLIGRLLLGTSSPGTPGEHWREICDHPRRQIAKWHAL 435
[Close]
BLAST of SMED30022586 vs. Ensembl Cavefish
Match: syt5b (synaptotagmin-1-like [Source:NCBI gene;Acc:103029888])

HSP 1 Score: 51.9878 bits (123), Expect = 6.786e-7
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            G + I LR+     +LTVN+ E +N    +   L + F  + L          KT+VK N+  P +NE+F F I   ++   ++L+ITVY+ ++  +N PIGK+F       +  RHW+++  N    +   H+L
Sbjct:  295 GDVCISLRYVPTAGKLTVNIMEAKNLKKMDVGGLSDPFVKIVLQHNGKRLKKKKTTVKKNTLNPYFNESFSFEIPFEQI-QKVQLLITVYDYDKLGSNDPIGKIFIGYGATGVGLRHWSDMLANPRRPVAQWHTL 428
[Close]
BLAST of SMED30022586 vs. Ensembl Medaka
Match: syt5a (synaptotagmin-1 [Source:NCBI gene;Acc:101166053])

HSP 1 Score: 61.6178 bits (148), Expect = 4.846e-10
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENE-TANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            G + I LR+     +LTVN+ E +N    +   L + F  V L          KTSVK N+  P +NE+F F I  +++   ++++ITVY+ ++  +N PIGK +       +  RHW+++  N    +   H+L
Sbjct:  248 GDICISLRYVPTAGKLTVNIMEAKNLKKMDVGGLSDPFVKVVLQHNGKRLKKKKTSVKQNTLNPYFNESFSFEIPFSQI-QKVQVLITVYDYDKLGSNDPIGKCWIGYGASGVGLRHWSDMLANPRRPVAQWHTL 381
[Close]
BLAST of SMED30022586 vs. Ensembl Medaka
Match: syt4 (synaptotagmin 4 [Source:NCBI gene;Acc:101163610])

HSP 1 Score: 52.373 bits (124), Expect = 5.575e-7
Identity = 38/148 (25.68%), Postives = 69/148 (46.62%), Query Frame = 2 
Query:  770 LFQNNVKLSNGTLEIGLRFDHKNTQ--LTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIF--PIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            + + N+K S+G  E+ L   +++T   LTV V + ++    +N  P + +  V ++         KT VK  S  P++NE F F  P +       I+L++   + + ++N  IG+L   ++       HW EI  +   QI   H +
Sbjct:  319 IIKRNIKKSSGRGELLLSLCYQSTTNTLTVVVLKARHIPRTENNGPTDAYVKVNMYHGKKRICKKKTHVKKCSPNPVFNELFYFDLPSEEGLRDTSIELLLMDSDNSRSSNGAIGRLVLGTAAAGTAGEHWREICDHPRRQIAKWHDM 466
[Close]
BLAST of SMED30022586 vs. Ensembl Medaka
Match: syt4 (synaptotagmin 4 [Source:NCBI gene;Acc:101163610])

HSP 1 Score: 51.9878 bits (123), Expect = 7.062e-7
Identity = 38/148 (25.68%), Postives = 69/148 (46.62%), Query Frame = 2 
Query:  770 LFQNNVKLSNGTLEIGLRFDHKNTQ--LTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIF--PIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSL 1198
            + + N+K S+G  E+ L   +++T   LTV V + ++    +N  P + +  V ++         KT VK  S  P++NE F F  P +       I+L++   + + ++N  IG+L   ++       HW EI  +   QI   H +
Sbjct:  318 IIKRNIKKSSGRGELLLSLCYQSTTNTLTVVVLKARHIPRTENNGPTDAYVKVNMYHGKKRICKKKTHVKKCSPNPVFNELFYFDLPSEEGLRDTSIELLLMDSDNSRSSNGAIGRLVLGTAAAGTAGEHWREICDHPRRQIAKWHDM 465
[Close]
BLAST of SMED30022586 vs. Ensembl Medaka
Match: ENSORLT00000042397.1 (synaptotagmin-2-like [Source:NCBI gene;Acc:101157206])

HSP 1 Score: 50.447 bits (119), Expect = 2.115e-6
Identity = 39/136 (28.68%), Postives = 68/136 (50.00%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+     +LTV + E +N    +   L + +  ++L +        KT+VK N+  P +NE+F F I L ++   I + +TV++ ++   N  IGK+F  S    L  +HW+++  N    I   H L+
Sbjct:  280 GDICISLRYVPTAGKLTVCILEAKNLKKMDACGLSDPYVKIQLLQGGKRLKKKKTTVKKNTLNPYYNESFSFEIPLEQM-QKILVAVTVFDYDKIGKNDAIGKIFVGSKATGLGLKHWSDMLANPRRPIAQWHVLQ 414
[Close]
BLAST of SMED30022586 vs. Ensembl Medaka
Match: ENSORLT00000008980.2 (synaptotagmin-2-like [Source:NCBI gene;Acc:101157206])

HSP 1 Score: 50.447 bits (119), Expect = 2.156e-6
Identity = 39/136 (28.68%), Postives = 68/136 (50.00%), Query Frame = 2 
Query:  800 GTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPL-NTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETA-NLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            G + I LR+     +LTV + E +N    +   L + +  ++L +        KT+VK N+  P +NE+F F I L ++   I + +TV++ ++   N  IGK+F  S    L  +HW+++  N    I   H L+
Sbjct:  256 GDICISLRYVPTAGKLTVCILEAKNLKKMDACGLSDPYVKIQLLQGGKRLKKKKTTVKKNTLNPYYNESFSFEIPLEQM-QKILVAVTVFDYDKIGKNDAIGKIFVGSKATGLGLKHWSDMLANPRRPIAQWHVLQ 390
[Close]
BLAST of SMED30022586 vs. Planmine SMEST
Match: SMESG000035473.1 (SMESG000035473.1)

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 2 
Query:  116 MSFQRLCGDIIIKLLETCCFCFHSETEEKGKLYIHDRTSPMILNQKPSIMNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEXXXXXXXXXXXXXQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            MSFQRLCGDIIIKLLETCCFCFHSETEEKGKLYIHDRTSPMILNQKPSIMNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEIKFPLKLILKKKIQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK
Sbjct:    1 MSFQRLCGDIIIKLLETCCFCFHSETEEKGKLYIHDRTSPMILNQKPSIMNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEIKFPLKLILKKKIQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 362
[Close]
BLAST of SMED30022586 vs. Planmine SMEST
Match: SMESG000035473.1 (SMESG000035473.1)

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 2 
Query:  263 MNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEXXXXXXXXXXXXXQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
            MNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEIKFPLKLILKKKIQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK
Sbjct:    1 MNQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRHSESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEIKFPLKLILKKKIQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 313
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BLAST of SMED30022586 vs. Planmine SMEST
Match: SMESG000035470.1 (SMESG000035470.1)

HSP 1 Score: 129.413 bits (324), Expect = 8.998e-34
Identity = 84/250 (33.60%), Postives = 130/250 (52.00%), Query Frame = 2 
Query:  452 PVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKITKKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEXXXXXXXXXXXXXQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTNSNLQIRMLHSLK 1201
             +E+ H     VLS+K+FP E IPD +DI +  +    +K    +K   F N++E DL    L + FY++ +    + +G I +PL+ IL     N  R   +   L   N +  N T+EI LR D  + QL V V   +  S++ Q  +N +CV+EL+K  +    ++T  K+N   P W+E + F I + +L     L I V+N+ E   + +G+L  PS E + ET HWN I +  N    MLH+LK
Sbjct:  106 AMEVTHEVKSRVLSVKIFPQETIPDTYDIYLVNSKNTIQKSVRNHKTKKFSNVNERDLKNFDLYIKFYEKHSLGANEDYGVINYPLQKILNMNPTNDKRRVKSRIGLNLVNSERVNKTIEICLRLDKSDKQLMVKVLRCKGLSSETQNIINPYCVIELWKGKSKISNFETKTKYNQISPEWDEAYFFQININDLKTKYLLKIIVFNDTENEKVQLGRLSIPSGEKSKETIHWNLILSKPNENSIMLHNLK 355
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BLAST of SMED30022586 vs. Planmine SMEST
Match: SMESG000038432.1 (SMESG000038432.1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.638e-10
Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 2 
Query:  596 TFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEXXXXXXXXXXXXXQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPS 1117
            TF NISE  L    L+L     K  + +   GEI              S++F      +F +  K S G++ + L  + K  +L V+V +G+     +     N +C+++L  ++T   T +TSVK+ +  P+WNE  IF I       +I L I V+++       IG++ FPS
Sbjct:  169 TFSNISESKLEYLTLNLKLCDWKDSEGEYGVGEINL------------SLQF----LEIFISCQKKSLGSIFVSLSVNMKKEKLLVSVLKGKGLKALELNNSSNPYCLIKLVSSNTKLGTRRTSVKYKTTDPVWNEPIIFNITQKHFLENICLKIKVFSKGRLTKNEIGEIEFPS 327
[Close]
BLAST of SMED30022586 vs. Planmine SMEST
Match: SMESG000038432.1 (SMESG000038432.1)

HSP 1 Score: 60.4622 bits (145), Expect = 8.881e-10
Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 2 
Query:  596 TFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEXXXXXXXXXXXXXQNSIRFYNTDFNLFQNNVKLSN---GTLEIGLRFDHKNTQLTVNVYEGQNFSN-QNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFPIKLAELANHIKLIITVYNENETANLPIGKLFFPS 1117
            TF NISE  L    L+L     K  + +   GEI   L+ +L+    +  R +  +   F + VK S+   G++ + L  + K  +L V+V +G+     +     N +C+++L  ++T   T +TSVK+ +  P+WNE  IF I       +I L I V+++       IG++ FPS
Sbjct:  169 TFSNISESKLEYLTLNLKLCDWKDSEGEYGVGEINLSLQFLLEASDVDDKRIFYIE--KFLSPVKKSDKSLGSIFVSLSVNMKKEKLLVSVLKGKGLKALELNNSSNPYCLIKLVSSNTKLGTRRTSVKYKTTDPVWNEPIIFNITQKHFLENICLKIKVFSKGRLTKNEIGEIEFPS 344
The following BLAST results are available for this feature:
BLAST of SMED30022586 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SYT141.029e-628.57synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:2314... [more]
SYT141.029e-628.57synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:2314... [more]
SYT141.107e-628.57synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:2314... [more]
SYT144.497e-626.32synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:2314... [more]
SYT144.857e-626.32synaptotagmin 14 [Source:HGNC Symbol;Acc:HGNC:2314... [more]
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BLAST of SMED30022586 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30022586 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30022586 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syt5a3.296e-928.68synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-... [more]
syt41.129e-725.00synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-... [more]
syt14a1.493e-630.08synaptotagmin XIVa [Source:ZFIN;Acc:ZDB-GENE-09031... [more]
syt162.493e-626.62synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313... [more]
syt14a2.596e-626.97synaptotagmin XIVa [Source:ZFIN;Acc:ZDB-GENE-09031... [more]
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BLAST of SMED30022586 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syt82.439e-726.47synaptotagmin 8 [Source:NCBI gene;Acc:100037878][more]
SYT142.144e-628.57synaptotagmin 14 [Source:NCBI gene;Acc:100491102][more]
SYT142.461e-628.57synaptotagmin 14 [Source:NCBI gene;Acc:100491102][more]
SYT142.587e-628.57synaptotagmin 14 [Source:NCBI gene;Acc:100491102][more]
SYT143.924e-628.57synaptotagmin 14 [Source:NCBI gene;Acc:100491102][more]
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BLAST of SMED30022586 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Syt149.124e-728.57synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:24444... [more]
Syt149.296e-728.57synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:24444... [more]
Syt141.972e-626.32synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:24444... [more]
Syt27.705e-627.94synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666][more]
Syt27.705e-627.94synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666][more]
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BLAST of SMED30022586 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q58G82|SY14L_HUMAN1.660e-827.48Putative synaptotagmin-14-like protein OS=Homo sap... [more]
sp|Q8NB59|SYT14_HUMAN5.314e-628.57Synaptotagmin-14 OS=Homo sapiens OX=9606 GN=SYT14 ... [more]
sp|Q7TN84|SYT14_MOUSE6.502e-628.57Synaptotagmin-14 OS=Mus musculus OX=10090 GN=Syt14... [more]
sp|Q5R4J5|SYT1_PONAB7.761e-624.26Synaptotagmin-1 OS=Pongo abelii OX=9601 GN=SYT1 PE... [more]
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BLAST of SMED30022586 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3B5LWY32.021e-832.84Synaptotagmin Va OS=Xiphophorus couchianus OX=3247... [more]
A0A3B4TUI24.222e-831.34Synaptotagmin Va OS=Seriola dumerili OX=41447 PE=4... [more]
A0A1A8IPL81.181e-730.88Synaptotagmin Va (Fragment) OS=Nothobranchius kuhn... [more]
A0A091K1E21.981e-728.68Synaptotagmin-1 (Fragment) OS=Colius striatus OX=5... [more]
A0A1V4JP123.492e-728.68Synaptotagmin-8 OS=Patagioenas fasciata monilis OX... [more]
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BLAST of SMED30022586 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syt5a1.069e-829.41synaptotagmin-2-like [Source:NCBI gene;Acc:1030278... [more]
syt5a1.144e-829.41synaptotagmin-2-like [Source:NCBI gene;Acc:1030278... [more]
syt45.629e-825.68synaptotagmin 4 [Source:NCBI gene;Acc:103045953][more]
syt45.819e-825.68synaptotagmin 4 [Source:NCBI gene;Acc:103045953][more]
syt5b6.786e-730.37synaptotagmin-1-like [Source:NCBI gene;Acc:1030298... [more]
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BLAST of SMED30022586 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30022586 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30022586 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30022586 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
syt5a4.846e-1030.37synaptotagmin-1 [Source:NCBI gene;Acc:101166053][more]
syt45.575e-725.68synaptotagmin 4 [Source:NCBI gene;Acc:101163610][more]
syt47.062e-725.68synaptotagmin 4 [Source:NCBI gene;Acc:101163610][more]
ENSORLT00000042397.12.115e-628.68synaptotagmin-2-like [Source:NCBI gene;Acc:1011572... [more]
ENSORLT00000008980.22.156e-628.68synaptotagmin-2-like [Source:NCBI gene;Acc:1011572... [more]
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BLAST of SMED30022586 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000035473.10.000e+0100.00SMESG000035473.1[more]
SMESG000035473.10.000e+0100.00SMESG000035473.1[more]
SMESG000035470.18.998e-3433.60SMESG000035470.1[more]
SMESG000038432.16.638e-1028.57SMESG000038432.1[more]
SMESG000038432.18.881e-1029.21SMESG000038432.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30022586 ID=SMED30022586|Name=SMED30022586|organism=Schmidtea mediterranea sexual|type=transcript|length=1214bp
TCACCATCTTGTCTTTGATGGGATAGTTTGACTAATTTTTGGTTTTGATT
GGTTCTCTTAATTGGGAATGCAAATTTTACGGTGCTTGCACTTATGACAT
GGCATTATTTGCAGAATGAGTTTTCAGAGGCTGTGTGGAGATATTATAAT
AAAACTTTTGGAAACTTGTTGTTTTTGTTTTCATTCAGAAACTGAAGAAA
AAGGGAAACTATACATCCACGATAGAACATCTCCAATGATTTTAAACCAA
AAACCTTCAATTATGAATCAGGAAATAGAGATAAAAAATATTTCATTGAA
TCTGCAGACGGAAAATACATTAAATCCAAGAAAACAATCTCTTGGAGGCA
ATTTTCTTGTTCCAAATGCAGGGTTAAATGAAAAACTTCCTTCAGTAATT
AAAGTAAAACGACATTCGGAATCGGATTTGGGGGACATGAATTACAATTT
TCCTGTTGAAATTAACCATAACCACATTTTGAACGTTTTGTCTATTAAAG
TTTTTCCAAACGAAAAAATTCCTGATAAATTTGATATTTCTGTGAAAACT
AATGACAAAATCACCAAGAAAATAAGCTACTTTTACAAAGTTATTACATT
TGACAATATAAGTGAAGATGATTTAAATACATCTTTCCTGAGCTTGACAT
TTTATAAGAGAAAAACGCCAGATGATAAAAAAAGTTTCGGAGAAATAAAA
TTTCCTCTAAAGTTAATATTGAAGAAAAAAATTCAAAATTCAATTAGATT
TTACAATACAGATTTCAATTTATTTCAAAACAATGTGAAATTATCCAACG
GAACGCTTGAAATCGGTTTACGTTTTGATCATAAAAACACTCAATTAACG
GTAAATGTTTACGAAGGACAGAATTTTTCAAACCAAAATCAAACCCCTTT
AAATACTTTCTGTGTCGTTGAATTATTTAAAACACATACCCTCTATATGA
CCTACAAAACCAGTGTCAAATTCAATTCGAATTGTCCGATTTGGAATGAA
ACTTTCATCTTTCCAATTAAGCTTGCCGAATTGGCTAATCATATCAAACT
GATTATAACAGTCTACAATGAAAATGAAACGGCAAATCTACCAATTGGAA
AATTGTTTTTCCCGTCTTCTGAAATGGCATTGGAAACTCGTCATTGGAAT
GAAATTCATACAAATTCCAACCTACAAATCAGAATGTTGCATAGCTTAAA
ATGACATTTAAATA
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protein sequence of SMED30022586-orf-1

>SMED30022586-orf-1 ID=SMED30022586-orf-1|Name=SMED30022586-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=363bp
MSFQRLCGDIIIKLLETCCFCFHSETEEKGKLYIHDRTSPMILNQKPSIM
NQEIEIKNISLNLQTENTLNPRKQSLGGNFLVPNAGLNEKLPSVIKVKRH
SESDLGDMNYNFPVEINHNHILNVLSIKVFPNEKIPDKFDISVKTNDKIT
KKISYFYKVITFDNISEDDLNTSFLSLTFYKRKTPDDKKSFGEIKFPLKL
ILKKKIQNSIRFYNTDFNLFQNNVKLSNGTLEIGLRFDHKNTQLTVNVYE
GQNFSNQNQTPLNTFCVVELFKTHTLYMTYKTSVKFNSNCPIWNETFIFP
IKLAELANHIKLIITVYNENETANLPIGKLFFPSSEMALETRHWNEIHTN
SNLQIRMLHSLK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000028Category 2 cell
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
Vocabulary: biological process
TermDefinition
GO:0006887exocytosis
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 243..346
e-value: 6.0E-16
score: 69.0
IPR000008C2 domainPFAMPF00168C2coord: 243..338
e-value: 4.8E-11
score: 42.9
IPR000008C2 domainPROSITEPS50004C2coord: 243..331
score: 10.634
IPR035892C2 domain superfamilyGENE3DG3DSA:2.60.40.150coord: 226..362
e-value: 4.7E-25
score: 90.1
NoneNo IPR availablePANTHERPTHR10024:SF227SYNAPTOTAGMIN 1coord: 27..362
NoneNo IPR availablePANTHERPTHR10024SYNAPTOTAGMINcoord: 27..362
NoneNo IPR availableSUPERFAMILYSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 229..361