Oligodendrocyte transcription factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30022584 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14
Homology
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Match: OLIG3 (oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]) HSP 1 Score: 122.479 bits (306), Expect = 4.948e-32 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + S P+ P+ LS+ N +P+ Sbjct: 37 LNSVSSTQGDMMQKMPGESLSRAGA-----KAAGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANSVHPVHPILGGALSSGNASSPL 198
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Match: OLIG2 (oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]) HSP 1 Score: 120.939 bits (302), Expect = 6.756e-31 Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F Sbjct: 107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGF 184
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Match: OLIG2 (oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]) HSP 1 Score: 120.939 bits (302), Expect = 6.756e-31 Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F Sbjct: 107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGF 184
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Match: BHLHE23 (basic helix-loop-helix family member e23 [Source:HGNC Symbol;Acc:HGNC:16093]) HSP 1 Score: 98.2117 bits (243), Expect = 1.938e-23 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +L+E ++ + Sbjct: 99 RSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALDEMRRLV 165
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Match: BHLHE23 (basic helix-loop-helix family member e23 [Source:HGNC Symbol;Acc:HGNC:16093]) HSP 1 Score: 98.2117 bits (243), Expect = 2.516e-23 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +L+E ++ + Sbjct: 115 RSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALDEMRRLV 181
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Match: hlh-32 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:Q7YWS9]) HSP 1 Score: 88.9669 bits (219), Expect = 8.788e-22 Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 511 MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEE 690 +RL IN RER RMHDLN ALD LR VIPYA+G +V+KLSKIATLLLAKN+I+M ++EE Sbjct: 15 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 74
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Match: hlh-17 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:O45489]) HSP 1 Score: 88.1965 bits (217), Expect = 1.899e-21 Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 511 MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEE 690 +RL IN RER RMHDLN ALD LR VIPYA+G +V+KLSKIATLLLAKN+I+M ++EE Sbjct: 15 VRLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEE 74
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Match: hlh-31 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:Q86D08]) HSP 1 Score: 78.1814 bits (191), Expect = 3.528e-17 Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 1 Query: 535 ERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEE 690 +R RMHDLN ALD LR VIPYA+G +V+KLSKIATLLLAKN+I+M ++EE Sbjct: 83 KRCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMKAKAIEE 134
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Match: hlh-16 (Helix Loop Helix [Source:UniProtKB/TrEMBL;Acc:O45320]) HSP 1 Score: 62.7734 bits (151), Expect = 7.285e-12 Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 511 MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKIN 708 +R INSRER+RMH+LN ++LR+ +PY N +++SK TLLLA N+I L N+ + Q ++N Sbjct: 41 LRNSINSRERRRMHELNDEFETLRECLPYPNEANSRRMSKANTLLLASNWIKQLANANHKLQMELN 106
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Match: cnd-1 (Neurogenic differentiation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P46581]) HSP 1 Score: 60.077 bits (144), Expect = 1.768e-10 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 496 STSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQK 699 S K R+K N RER RMH LN+ALD LR+ IP +KLSKI TL LA+NYI L+ L+ +++ Sbjct: 15 SKRKVRRVKANGRERARMHGLNNALDMLREYIPITT--QHQKLSKIETLRLARNYIDALQRMLQTNEQ 80
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Match: Oli (gene:FBgn0032651 transcript:FBtr0080986) HSP 1 Score: 107.071 bits (266), Expect = 6.712e-27 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 490 KQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDP 843 K K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +N+LEE ++ + Y+Q S + ++ + L AFP ++ Q + P Sbjct: 122 KNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLL--AYIQ--------------STTGAAPLDLGAFPAAAKLQALLQGP 223
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Match: Oli (gene:FBgn0032651 transcript:FBtr0344781) HSP 1 Score: 107.071 bits (266), Expect = 6.712e-27 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 490 KQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDP 843 K K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +N+LEE ++ + Y+Q S + ++ + L AFP ++ Q + P Sbjct: 122 KNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLL--AYIQ--------------STTGAAPLDLGAFPAAAKLQALLQGP 223
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Match: Oli (gene:FBgn0032651 transcript:FBtr0303253) HSP 1 Score: 107.071 bits (266), Expect = 6.712e-27 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 490 KQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDP 843 K K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +N+LEE ++ + Y+Q S + ++ + L AFP ++ Q + P Sbjct: 122 KNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLL--AYIQ--------------STTGAAPLDLGAFPAAAKLQALLQGP 223
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Match: Oli (gene:FBgn0032651 transcript:FBtr0303252) HSP 1 Score: 107.071 bits (266), Expect = 6.712e-27 Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 490 KQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDP 843 K K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +N+LEE ++ + Y+Q S + ++ + L AFP ++ Q + P Sbjct: 122 KNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLL--AYIQ--------------STTGAAPLDLGAFPAAAKLQALLQGP 223
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Match: dimm (gene:FBgn0023091 transcript:FBtr0333354) HSP 1 Score: 59.6918 bits (143), Expect = 1.172e-9 Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILML 672 RL+ N RER RMH LN A SLR+VIP+ ++LSKI TL LAKNYI+ L Sbjct: 158 RLESNERERMRMHSLNDAFQSLREVIPHVE--MERRLSKIETLTLAKNYIINL 208
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Match: olig3 (oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]) HSP 1 Score: 119.398 bits (298), Expect = 3.618e-31 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 397 NSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKE---MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVI 756 NS S + K ++ SK + KQ T +E +RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SL+E ++ + +IY +H F C + Sbjct: 34 NSVSSTQNELLQKMASEHLSKTPSGSKYKLKKQVTEQEIQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLDEMKRLVGEIYGGHHSAF-HCGTV 155
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Match: olig2 (oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]) HSP 1 Score: 116.316 bits (290), Expect = 6.716e-30 Identity = 52/71 (73.24%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 + MRLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY Sbjct: 81 QSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLEEMKRLVSEIY 151
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Match: olig4 (oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]) HSP 1 Score: 114.39 bits (285), Expect = 2.197e-29 Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSS 783 +++RLK+NSRERKRMHDLN A+D LR+V+PYA GP+V+KLSKI+TLLLA+NYILML +SLEE +K + +Y N +V+ P S + ++ Sbjct: 62 QDLRLKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYILMLSSSLEEMKKLVGDVYGANAQSHSARRVLPPTSAAPAT 154
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Match: olig4 (oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]) HSP 1 Score: 114.39 bits (285), Expect = 2.197e-29 Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSS 783 +++RLK+NSRERKRMHDLN A+D LR+V+PYA GP+V+KLSKI+TLLLA+NYILML +SLEE +K + +Y N +V+ P S + ++ Sbjct: 62 QDLRLKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYILMLSSSLEEMKKLVGDVYGANAQSHSARRVLPPTSAAPAT 154
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Match: bhlhe23 (basic helix-loop-helix family, member e23 [Source:ZFIN;Acc:ZDB-GENE-050913-22]) HSP 1 Score: 99.3673 bits (246), Expect = 5.646e-24 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 103 RSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 169
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Match: zbed4 (zinc finger, BED-type containing 4 [Source:Xenbase;Acc:XB-GENE-6076969]) HSP 1 Score: 118.627 bits (296), Expect = 1.052e-30 Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 421 NKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVID 759 +K + E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + Sbjct: 52 SKHGSRGEGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTVG 160
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Match: gps1 (G protein pathway suppressor 1 [Source:Xenbase;Acc:XB-GENE-955148]) HSP 1 Score: 111.309 bits (277), Expect = 1.683e-28 Identity = 47/75 (62.67%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 493 QSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 Q E+RLK+NSRER+RMHDLN A+D LR+V+PY++GP+V+KLSKI+TL+LA+NYI+ML NSLEE ++ +N++Y Sbjct: 53 QENQHELRLKVNSRERQRMHDLNQAMDGLREVMPYSHGPSVRKLSKISTLILARNYIVMLSNSLEEMKRLVNEVY 127
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Match: OLIG2 (oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]) HSP 1 Score: 110.538 bits (275), Expect = 2.292e-28 Identity = 50/68 (73.53%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKIN 708 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +N Sbjct: 90 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLNNSLEEMKRLVN 157
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Match: lbr (lamin B receptor [Source:Xenbase;Acc:XB-GENE-979300]) HSP 1 Score: 98.5969 bits (244), Expect = 6.087e-23 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 490 KQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 K + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 147 KSKEQRTLRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 218
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Match: neurod2 (neuronal differentiation 2 [Source:NCBI gene;Acc:779941]) HSP 1 Score: 68.5514 bits (166), Expect = 2.618e-12 Identity = 41/80 (51.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 502 SKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFL 741 SK R K N+RER RMHDLNSALD+LR+V+P + +KLSKI TL LAKNYI L L ++ Y+Q K L Sbjct: 102 SKVRRQKANARERNRMHDLNSALDNLRKVVPCYS--KTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVAYVQTLCKGL 179
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Match: Olig3 (oligodendrocyte transcription factor 3 [Source:MGI Symbol;Acc:MGI:2149955]) HSP 1 Score: 121.324 bits (303), Expect = 1.099e-31 Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + + P+ P+ LS+ N +P+ Sbjct: 38 LNSVSSTQGDMVQKMPGESLSRAGA-----KAAGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANAVHPVHPILGGALSSGNASSPL 199
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Match: Olig2 (oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]) HSP 1 Score: 120.168 bits (300), Expect = 8.324e-31 Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F Sbjct: 107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGF 184
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Match: Bhlhe23 (basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]) HSP 1 Score: 100.908 bits (250), Expect = 1.605e-24 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 97 RSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 163
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Match: Bhlhe22 (basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]) HSP 1 Score: 100.523 bits (249), Expect = 2.225e-23 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 215 KALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 281
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Match: Olig1 (oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]) HSP 1 Score: 81.2629 bits (199), Expect = 4.077e-17 Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 511 MRLKINSRERKRMHDLNSALDSLRQVI-PYA----NGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKIN 708 +R KINSRERKRM DLN A+D+LR+VI PY+ G +KLSKIATLLLA+NYIL+L +SL+E ++ + Sbjct: 95 LRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQELRRALG 165
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Match: sp|Q7RTU3|OLIG3_HUMAN (Oligodendrocyte transcription factor 3 OS=Homo sapiens OX=9606 GN=OLIG3 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.376e-31 Identity = 74/185 (40.00%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + S P+ P+ LS+ N +P+ Sbjct: 37 LNSVSSTQGDMMQKMPGESLSRAGA-----KAAGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANSVHPVHPILGGALSSGNASSPL 198
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Match: sp|Q6PFG8|OLIG3_MOUSE (Oligodendrocyte transcription factor 3 OS=Mus musculus OX=10090 GN=Olig3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.689e-31 Identity = 73/185 (39.46%), Postives = 105/185 (56.76%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + + P+ P+ LS+ N +P+ Sbjct: 38 LNSVSSTQGDMVQKMPGESLSRAGA-----KAAGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANAVHPVHPILGGALSSGNASSPL 199
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Match: sp|Q90XB3|OLIG2_CHICK (Oligodendrocyte transcription factor 2 OS=Gallus gallus OX=9031 GN=OLIG2 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.339e-30 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 490 KQSTSKEM---RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELS 876 KQ T E+ RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F P M + S L A P G + P L P + S Sbjct: 97 KQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAAFHPAAC--PAGM-GAHSAPLPAHP-GHPASHPAHHPILPPAAVSSAS 224
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Match: sp|Q13516|OLIG2_HUMAN (Oligodendrocyte transcription factor 2 OS=Homo sapiens OX=9606 GN=OLIG2 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 3.244e-30 Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F Sbjct: 107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGF 184
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Match: sp|Q9EQW6|OLIG2_MOUSE (Oligodendrocyte transcription factor 2 OS=Mus musculus OX=10090 GN=Olig2 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.823e-30 Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +++RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F Sbjct: 107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGF 184
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Match: A0A0A7M430 (Oligodendrocyte transcription factor (Fragment) OS=Schmidtea polychroa OX=50054 GN=olig PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 4.566e-62 Identity = 113/122 (92.62%), Postives = 116/122 (95.08%), Query Frame = 1 Query: 448 ETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIG 813 ETSKL+YNYN R SKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKI Q+HFKFLE KVI+PRSMSNSSSISLK FPIG Sbjct: 1 ETSKLSYNYNSRLSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKICFQSHFKFLEYKVIEPRSMSNSSSISLKEFPIG 122
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Match: U5YTM4 (Olig2 protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=olig2 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.164e-49 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 1 Query: 556 LNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIG 813 LNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLK FPIG Sbjct: 1 LNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKEFPIG 86
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Match: A0A452VHB1 (Oligodendrocyte transcription factor 3 OS=Ursus maritimus OX=29073 GN=OLIG3 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.417e-30 Identity = 77/201 (38.31%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPIHCNDENYWQDLPKFSP 948 + S+S + D+ P S S A T K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + + P+ P+ LS+ N +P+ LP P Sbjct: 37 LNSVSSTQGDMVPKMPGESLSRAGT-----KATGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANAVHPVHPILGGALSSGNASSPLSA------ASLPAIGP 208
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Match: A0A3Q7WFU3 (oligodendrocyte transcription factor 3 OS=Ursus arctos horribilis OX=116960 GN=OLIG3 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.391e-29 Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A T K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + + P+ P+ LS+ N +P+ Sbjct: 37 LNSVSSTQGDMVPKMPGESLSRAGT-----KATGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANAVHPVHPILGGALSSGNASSPL 198
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Match: W5NX34 (Oligodendrocyte transcription factor 3 OS=Ovis aries OX=9940 GN=OLIG3 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.387e-29 Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 349 IRSISLKKKDIFVS-PENSFSMAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPI 900 + S+S + D+ P S S A K+ E+SK Y + S+Q +++RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SLEE ++ + +IY +H F C + G + + P P+ LS+ N +P+ Sbjct: 37 LNSVSSTQGDMVQKMPGESLSRAGA-----KAAGESSK--YKIKKQLSEQDL-QQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAF-HCGTV--------------GHSAGHPAHAANAVHPAHPILGGALSSGNASSPL 198
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Match: olig2 (oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]) HSP 1 Score: 114.005 bits (284), Expect = 3.234e-29 Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 1 Query: 511 MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 +RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY Sbjct: 67 IRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLEEMKRLVSEIY 135
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Match: olig4 (oligodendrocyte transcription factor 3-like [Source:NCBI gene;Acc:103045051]) HSP 1 Score: 113.62 bits (283), Expect = 4.557e-29 Identity = 49/71 (69.01%), Postives = 63/71 (88.73%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 +E+RLK+NSRERKRMHDLN A+D LR+V+PYA GP+V+KLSKI+TLLLA+NYILML +SLEE +K + +Y Sbjct: 74 QELRLKVNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYILMLSSSLEEMKKLVGDVY 144
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Match: olig3 (oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]) HSP 1 Score: 111.309 bits (277), Expect = 4.945e-28 Identity = 51/82 (62.20%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 481 RFSKQSTSKE---MRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 R KQ++ +E +RLKIN RERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML +SL+E ++ + ++Y Sbjct: 71 RLKKQASEEEIQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSSSLDEMKRLVAELY 152
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Match: bhlhe23 (basic helix-loop-helix family, member e23 [Source:ZFIN;Acc:ZDB-GENE-050913-22]) HSP 1 Score: 99.3673 bits (246), Expect = 3.343e-24 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 92 RSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 158
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Match: bhlhe22 (basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]) HSP 1 Score: 99.7525 bits (247), Expect = 5.834e-24 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYL-QNH 729 K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + YL Q H Sbjct: 117 KMLRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV--AYLNQGH 190
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Match: neurod1 (neuronal differentiation 1 [Source:NCBI gene;Acc:30169]) HSP 1 Score: 64.3142 bits (155), Expect = 4.747e-12 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 487 SKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSL 684 ++Q K R+K N+RER RMH LN+ALD+LR+V+P + +KLSKI TL LAKNYI L L Sbjct: 16 ARQERFKMRRVKANARERNRMHGLNAALDNLRKVVPCYS--KTQKLSKIETLRLAKNYIWALSEIL 79
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006843.1 (pep scaffold:Pmarinus_7.0:GL488467:178:1220:1 gene:ENSPMAG00000006182.1 transcript:ENSPMAT00000006843.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 58.151 bits (139), Expect = 1.589e-10 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLE 687 R+K N RER RMH+LN ALD+LR V+P P +L+KI TL A NYI +L +L+ Sbjct: 45 RMKANDRERNRMHNLNDALDALRGVLPTL--PDDARLTKIETLRFAYNYIWVLTETLQ 100
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Match: scxa (scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]) HSP 1 Score: 51.2174 bits (121), Expect = 2.230e-8 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSL 684 R N+RER R +NSA +LR +IP P +KLSK+ TLLLA +YI L N+L Sbjct: 38 RRAANARERDRTQSVNSAFTALRTLIPTE--PADRKLSKLETLLLASSYIAHLGNTL 92
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428]) HSP 1 Score: 47.7506 bits (112), Expect = 7.067e-7 Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQK 699 ++ R N RER+R LN A SLRQ+IP P+ KLSKI TL LA YI L L E ++ Sbjct: 94 QQQRFVANVRERQRTQSLNEAFASLRQIIPTL--PS-DKLSKIQTLKLATRYIDFLYQVLAERRR 155
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Match: TWIST1 (twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428]) HSP 1 Score: 47.7506 bits (112), Expect = 9.312e-7 Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQK 699 ++ R N RER+R LN A SLRQ+IP P+ KLSKI TL LA YI L L E ++ Sbjct: 112 QQQRFVANVRERQRTQSLNEAFASLRQIIPTL--PS-DKLSKIQTLKLATRYIDFLYQVLAERRR 173
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Match: EDO30831 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZM2]) HSP 1 Score: 54.299 bits (129), Expect = 3.212e-9 Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 517 LKINSRERKRMHDLNSALDSLRQVIP---YANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNH 729 L+ N+RER+R LNSA D LR VIP GP +KL++I TL LA +YI+ L LE+ +K + H Sbjct: 59 LRRNARERERQGRLNSAFDVLRGVIPDYLSGKGPE-RKLTQIETLRLATHYIMALSEMLEDENQKSSDCCECGH 131
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Match: EDO36265 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ29]) HSP 1 Score: 53.5286 bits (127), Expect = 1.730e-8 Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 529 SRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSL 684 +RER RMH LN A DSLR+ IP N +K SKIATL LA +YI L + L Sbjct: 74 ARERSRMHSLNDAFDSLRKAIPKTNYNQEEKPSKIATLRLAIHYIAALSDIL 125
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Match: NVNGN1 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ32]) HSP 1 Score: 48.9062 bits (115), Expect = 4.042e-8 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQ 696 RLK ++RERKR H LN+AL+ LR+ +P + +KLSKI L LA +YI ML L SQ Sbjct: 2 RLKASARERKRRHVLNNALELLRKKVPCVDQ-NPQKLSKIEVLRLAIDYIAMLSCYLNNSQ 61
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Match: EDO42924 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZZ0]) HSP 1 Score: 47.3654 bits (111), Expect = 1.549e-7 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSL 684 R N+RER R H +N+A ++LR +IP P+ +KLSKI TL LA +YI L L Sbjct: 3 RQAANARERNRTHSVNAAFNALRLLIP--TEPSDRKLSKIETLRLASSYIAHLSTIL 57
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Match: NVATO2 (Atonal-related protein 2; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJ22]) HSP 1 Score: 50.0618 bits (118), Expect = 3.358e-7 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSL 684 RL+ N RER+RM LN ALDSL++ IP + ++++K+ L +A NYI L ++L Sbjct: 143 RLRANDRERRRMKSLNRALDSLKKCIPVPQ--SKRRVTKLEILRIACNYIKSLSDTL 197
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Match: olig2 (oligodendrocyte transcription factor 2 [Source:NCBI gene;Acc:101155730]) HSP 1 Score: 119.398 bits (298), Expect = 3.665e-31 Identity = 67/152 (44.08%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYL--QNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLI-PLETTELSNTNFQTPIHCNDENYWQDLPKFSPG 951 + +RLKINSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKIATLLLA+NYILML NSLEE ++ +++IY +H F S + + + A P S + PL+ P+ TT LS + P +PG Sbjct: 79 QSIRLKINSRERKRMHDLNVAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLEEMKRLVSEIYGSSGHHGGFHP-------SACGTMTHAGPAHPAASHASHPAVHHPLLPPVSTTSLSAPGISAVTSVRPHHGLLKAPTAAPG 223
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Match: olig4 (oligodendrocyte transcription factor 3 [Source:NCBI gene;Acc:101163780]) HSP 1 Score: 112.849 bits (281), Expect = 9.061e-29 Identity = 48/71 (67.61%), Postives = 64/71 (90.14%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIY 717 +++RLK+NSRERKRMHDLN A+D LR+V+PYA+GP+V+KLSKI+TLLLA+NYILML +SLEE +K + +Y Sbjct: 71 QDLRLKVNSRERKRMHDLNQAMDGLREVMPYAHGPSVRKLSKISTLLLARNYILMLSSSLEEMRKLVGDVY 141
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Match: bhlhe23 (basic helix-loop-helix family member e23 [Source:NCBI gene;Acc:101164557]) HSP 1 Score: 99.3673 bits (246), Expect = 4.755e-24 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 + +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 103 RSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 169
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Match: bhlhe22 (basic helix-loop-helix family member e22 [Source:NCBI gene;Acc:101158239]) HSP 1 Score: 98.9821 bits (245), Expect = 1.553e-23 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM +LEE ++ + Sbjct: 135 KMLRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLV 201
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Match: olig1 (oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]) HSP 1 Score: 86.2705 bits (212), Expect = 6.199e-20 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANG-PTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKF 738 +E+R KINSRERKRM DLN A+D+LR+V+P+ G P ++LSKI+TL+LA+NYIL+L +SL+E I I LQN F F Sbjct: 30 QELRRKINSRERKRMQDLNIAMDALREVMPHQPGAPPGRRLSKISTLVLARNYILLLGSSLQEIW--ILDILLQNDFLF 106
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Match: SMESG000060237.1 (SMESG000060237.1) HSP 1 Score: 395.201 bits (1014), Expect = 7.163e-140 Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 1 Query: 409 MAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPIHCNDENYWQDLPKFSPGTSNNYLIQNLIHDGF 996 MAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETT+LSNTNFQTPIHCNDENYWQDLPKFS GTSNNYLIQNLIHDGF Sbjct: 1 MAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKINKIYLQNHFKFLECKVIDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTDLSNTNFQTPIHCNDENYWQDLPKFSSGTSNNYLIQNLIHDGF 196
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Match: SMESG000080379.1 (SMESG000080379.1) HSP 1 Score: 99.7525 bits (247), Expect = 7.482e-25 Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 1 Query: 505 KEMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEESQKKI 705 K +RL IN+RER+RMHDLN ALD LR VIPYA+ P+V+KLSKIATLLLAKNYILM ++LEE +K I Sbjct: 70 KPLRLSINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQASALEELRKTI 136
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Match: SMESG000046205.1 (SMESG000046205.1) HSP 1 Score: 55.8398 bits (133), Expect = 4.935e-10 Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 1 Query: 514 RLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLE 687 R N RERKRM+ LN A D LR V+PY++ KK+SK TLL+A+ YI L LE Sbjct: 22 RTAANDRERKRMYCLNRAFDQLRDVVPYSSNQ--KKMSKFETLLMAQTYIETLVEMLE 77
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Match: SMESG000066244.1 (SMESG000066244.1) HSP 1 Score: 56.9954 bits (136), Expect = 3.081e-9 Identity = 58/180 (32.22%), Postives = 81/180 (45.00%), Query Frame = 1 Query: 508 EMRLKINSRERKRMHDLNSALDSLRQVIPYANGPTVKKLSKIATLLLAKNYILMLKNSLEES--------QKKINKIYLQNHFKFLECKV-IDPRSMSNSSSISLKAFPIGSESQFIQSDPPLIPLETTELSNTNFQTPIHCNDEN----YWQDLPKFSPGTS----------NNYLIQN 978 + R + NSRER RMH LN AL+SLR +P N +KLSKI TL LA NYI L + K + + Q + + I+PR +S SSS F SE + + L P + NT + P +C N +++ FSP +S +NY+IQ Sbjct: 48 QRRARANSRERNRMHGLNHALESLRLHVPVFNH--TQKLSKIETLRLASNYIWALSKIVRSGLFPDTLTYAKTLTEGLSQTTANLVASSLHINPRLLSKSSS----NFTNSSEKLYDCQE--LDPTDQQYPVNTIIKYPFYCQSSNQTGQVYEEKNDFSPNSSFMHQECALNVDNYVIQG 219
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Match: SMESG000056587.1 (SMESG000056587.1) HSP 1 Score: 52.373 bits (124), Expect = 1.411e-7 Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 493 QSTSKEMRLKINSRERKRMHDLNSALDSLRQVIP-YANGPTVKKLSKIATLLLAKNYILMLKNSLEESQK 699 +S ++E R++ N+RER R+H +++A ++LR +P Y+N P KLSK+ L +A YI L L+ S K Sbjct: 143 KSLTRERRVEANARERSRVHTISAAFETLRHAVPGYSNSP---KLSKLGILRIACCYIESLNQLLQTSDK 209 The following BLAST results are available for this feature:
BLAST of Oligodendrocyte transcription factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Oligodendrocyte transcription factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Oligodendrocyte transcription factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30022584 ID=SMED30022584|Name=Oligodendrocyte transcription factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1065bpback to top protein sequence of SMED30022584-orf-1 >SMED30022584-orf-1 ID=SMED30022584-orf-1|Name=SMED30022584-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=197bp MAKTNKFIKKSNSETSKLNYNYNLRFSKQSTSKEMRLKINSRERKRMHDLback to top Aliases
The feature 'Oligodendrocyte transcription factor' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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