Nuclear pore complex protein Nup98-Nup96

Overview


Name	Nuclear pore complex protein Nup98-Nup96
Smed ID	SMED30022556
Length (bp)	894

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30022556

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
oocyte	SMED30022556	SMESG000022300.1	Contig6174	newmark_ests	PMID:28434803 Rouhana et al., 2017
oocyte	SMED30022556	SMESG000022300.1	Contig6174	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30022556	SMESG000022300.1	Contig6174	newmark_ests	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30022556	SMESG000022300.1	Contig6174	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Match: NUP98 (nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068])

HSP 1 Score: 53.1434 bits (126), Expect = 3.674e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Match: NUP98 (nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068])

HSP 1 Score: 52.7582 bits (125), Expect = 4.038e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Match: NUP98 (nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068])

HSP 1 Score: 51.9878 bits (123), Expect = 9.489e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Match: NUP98 (nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068])

HSP 1 Score: 50.447 bits (119), Expect = 2.428e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Match: NUP98 (nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068])

HSP 1 Score: 50.447 bits (119), Expect = 2.716e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Celegans
Match: npp-10 (Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9])

HSP 1 Score: 48.1358 bits (113), Expect = 4.640e-6
Identity = 24/56 (42.86%), Postives = 30/56 (53.57%), Query Frame = 3

Query:   24 IIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            + GT VKF   +  D + +N    TI T     S M +Y+ KS EELR EDY  NR
Sbjct:  142 VSGTTVKFEPPISSDTMMRNGTTQTISTKHMCISAMSKYDGKSIEELRVEDYIANR 197

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Celegans
Match: npp-10 (Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9])

HSP 1 Score: 48.1358 bits (113), Expect = 4.642e-6
Identity = 24/56 (42.86%), Postives = 30/56 (53.57%), Query Frame = 3

Query:   24 IIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            + GT VKF   +  D + +N    TI T     S M +Y+ KS EELR EDY  NR
Sbjct:  144 VSGTTVKFEPPISSDTMMRNGTTQTISTKHMCISAMSKYDGKSIEELRVEDYIANR 199

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Fly
Match: Nup98-96 (gene:FBgn0039120 transcript:FBtr0304567)

HSP 1 Score: 50.447 bits (119), Expect = 1.361e-6
Identity = 37/122 (30.33%), Postives = 54/122 (44.26%), Query Frame = 3

Query:   39 VKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTL-NSTNGIQNNSQIXXXXXXXXXXXXXTINKQSNNLFGAN---STGAFGSPVNTNQSNNLFGSNSTG 392
             K+   +G D + K+    ++ T  +  + MKE+E KS EELR EDY C R      N+       +Q+                  S  LFG+    STG FG  V  N+S  +FG+ + G
Sbjct:  202 AKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGPQAGNAPGAFGFGAQV-----------TQPAQPASGGLFGSTAQPSTGLFGQTVTENKS--MFGTTAFG 310

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
Match: nup98 (nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180])

HSP 1 Score: 55.0694 bits (131), Expect = 3.371e-8
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  161 GTTIKFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
Match: nup98 (nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180])

HSP 1 Score: 50.8322 bits (120), Expect = 1.497e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  161 GTTIKFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
Match: nup98 (nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180])

HSP 1 Score: 50.8322 bits (120), Expect = 1.498e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  161 GTTIKFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
Match: nup98 (nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180])

HSP 1 Score: 50.8322 bits (120), Expect = 1.524e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  161 GTTIKFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:100145055])

HSP 1 Score: 50.0618 bits (118), Expect = 3.328e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPSGTDTMAKGGVTTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:100145055])

HSP 1 Score: 50.0618 bits (118), Expect = 3.727e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPSGTDTMAKGGVTTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:100145055])

HSP 1 Score: 49.2914 bits (116), Expect = 5.413e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  183 GTTIKFNPPSGTDTMAKGGVTTNISTKHQCITAMKEYESKSLEELRLEDYQANR 236

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:100145055])

HSP 1 Score: 49.2914 bits (116), Expect = 5.859e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  183 GTTIKFNPPSGTDTMAKGGVTTNISTKHQCITAMKEYESKSLEELRLEDYQANR 236

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Match: Nup98 (nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404])

HSP 1 Score: 52.373 bits (124), Expect = 3.679e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Match: Nup98 (nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404])

HSP 1 Score: 52.373 bits (124), Expect = 3.766e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Match: Nup98 (nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404])

HSP 1 Score: 52.373 bits (124), Expect = 4.051e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Match: Nup98 (nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404])

HSP 1 Score: 52.373 bits (124), Expect = 4.115e-7
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Match: Nup98 (nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404])

HSP 1 Score: 50.447 bits (119), Expect = 2.056e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K    T I T     + MKEYE+KS EELR EDY+ NR
Sbjct:  159 GTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR 212

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Match: A0A2J7PID8 (Uncharacterized protein (Fragment) OS=Cryptotermes secundus OX=105785 GN=B7P43_G03271 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.569e-9
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 3

Query:   12 TTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            TT   +GTP+KF  + G D V KN    TI T  +  + MKEYE+KS EELR EDY  NR
Sbjct:  176 TTAAAVGTPIKFTPVTGSDTVVKNGVTQTISTRHHCITCMKEYESKSLEELRLEDYVANR 235

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Match: A0A1B6F308 (Uncharacterized protein (Fragment) OS=Cuerna arida OX=1464854 GN=g.27333 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.099e-8
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 3

Query:   39 VKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            VKFVA+ G D + KN   TTI T  +  + MKEYE+KS EELR EDY  NR
Sbjct:  172 VKFVAVTGTDTMVKNGVSTTISTRHHCITCMKEYESKSLEELRLEDYVANR 222

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Match: A0A1B6MB10 (Uncharacterized protein (Fragment) OS=Graphocephala atropunctata OX=36148 GN=g.39189 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.171e-8
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 3

Query:   39 VKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            VKFVA+ G D + KN   TTI T  +  + MKEYE+KS EELR EDY  NR
Sbjct:  172 VKFVAVTGTDTMAKNGVSTTISTRHHCITCMKEYESKSLEELRLEDYVANR 222

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Match: A0A1B6M0Q2 (Uncharacterized protein (Fragment) OS=Graphocephala atropunctata OX=36148 GN=g.39194 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.238e-8
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 3

Query:   39 VKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            VKFVA+ G D + KN   TTI T  +  + MKEYE+KS EELR EDY  NR
Sbjct:  172 VKFVAVTGTDTMAKNGVSTTISTRHHCITCMKEYESKSLEELRLEDYVANR 222

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Match: A0A1B6J241 (Uncharacterized protein (Fragment) OS=Homalodisca liturata OX=320908 GN=g.37450 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.354e-8
Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 3

Query:   39 VKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            VKFVA+ G D + KN   TTI T  +  + MKEYE+KS EELR EDY  NR
Sbjct:  172 VKFVAVTGTDTMVKNGVSTTISTRHHCITCMKEYESKSLEELRLEDYVANR 222

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Cavefish
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:103032416])

HSP 1 Score: 51.2174 bits (121), Expect = 7.340e-7
Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K+   T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  130 GTAIKFNPPTGSDTMVKSGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 183

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Cavefish
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:103032416])

HSP 1 Score: 51.2174 bits (121), Expect = 7.365e-7
Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K+   T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  162 GTAIKFNPPTGSDTMVKSGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 215

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Cavefish
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:103032416])

HSP 1 Score: 51.2174 bits (121), Expect = 7.756e-7
Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT +KF    G D + K+   T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  130 GTAIKFNPPTGSDTMVKSGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 183

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002346.1 (pep scaffold:Pmarinus_7.0:GL477945:9692:37886:-1 gene:ENSPMAG00000002110.1 transcript:ENSPMAT00000002346.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.0694 bits (131), Expect = 8.790e-9
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 3

Query:   12 TTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            + Q   GT +KF+ + G D + KN   TTI+T     + MKEYE KS EELR EDY  NR
Sbjct:  155 SAQATKGTTIKFIPVEGTDTMMKNGASTTIRTKHQCITAMKEYETKSLEELRLEDYTDNR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Medaka
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:101172463])

HSP 1 Score: 53.1434 bits (126), Expect = 1.912e-7
Identity = 28/58 (48.28%), Postives = 32/58 (55.17%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVT 203
            GT VKF    G D + K    T+I T     + MKEYENKS EELR EDY+  R   T
Sbjct:  161 GTTVKFNPPSGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPT 218

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Medaka
Match: nup98 (nucleoporin 98 [Source:NCBI gene;Acc:101172463])

HSP 1 Score: 50.447 bits (119), Expect = 1.343e-6
Identity = 27/54 (50.00%), Postives = 31/54 (57.41%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNR 191
            GT VKF    G D + K    T+I T     + MKEYENKS EELR EDY+  R
Sbjct:  161 GTTVKFNPPSGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGR 214

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Planmine SMEST
Match: SMESG000022300.1 (SMESG000022300.1)

HSP 1 Score: 449.899 bits (1156), Expect = 5.105e-152
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 3

Query:    3 SIGTTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTLNSTNGIQNNSQIXXXXXXXXXXXXXTINKQSNNLFGANSTGAFGSPVNTNQSNNLFGSNSTGAFGSPVXXXXXXXXXXXXXXXXXXXXXLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHXXXXXXXXXXXXXXXXXVNSTIAPNNLFGNHNSTNNTATFQGTGLFGAANASTNQFGNPQIELNQKTTLDFNNNSVGNSNTFGQSNQNSIFNNQPSLQNSQAKAPGG 893
            SIGTTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTLNSTNGIQNNSQISGFNPNSNNSFGSTINKQSNNLFGANSTGAFGSPVNTNQSNNLFGSNSTGAFGSPVNANQSNNNQGSN FGNNNSSNLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHNTNFGQNTFTATNTNQQVNSTIAPNNLFGNHNSTNNTATFQGTGLFGAANASTNQFGNPQIELNQKTTLDFNNNSVGNSNTFGQSNQNSIFNNQPSLQNSQAKAPGG
Sbjct:   24 SIGTTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTLNSTNGIQNNSQISGFNPNSNNSFGSTINKQSNNLFGANSTGAFGSPVNTNQSNNLFGSNSTGAFGSPVNANQSNNNQGSNLFGNNNSSNLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHNTNFGQNTFTATNTNQQVNSTIAPNNLFGNHNSTNNTATFQGTGLFGAANASTNQFGNPQIELNQKTTLDFNNNSVGNSNTFGQSNQNSIFNNQPSLQNSQAKAPGG 320

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Planmine SMEST
Match: SMESG000022283.1 (SMESG000022283.1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.653e-12
Identity = 80/250 (32.00%), Postives = 107/250 (42.80%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTLNSTNGIQNNSQIXXXXXXXXXXXXXTINKQSNN---------LFGANST---GAFGSPVNTNQSNNLFGSNS--TGAFGSPVXXXXXXXXXXXXXXXXXXXXXLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHXXXXXXXXXXXXXXXXXVNSTIAPNNLFGNHNSTNNTATFQG---TGLFGAANAS 728
            GT +K+V L G D ++KNN    + T LN  S MKEYE KS EELR EDY  NR  +T  S   I NNS        +  +   +    SNN         LFG   T    AFGS  N  +   LFG+++     FG+                    S++LFG+Q   +  ++ FGN     LFG   + Q                         PN LF N N++ ++  FQ    TG FGA+NA+
Sbjct:   42 GTTIKYVPLNGTDTIQKNNQTVNVSTKLNCISAMKEYEMKSLEELRLEDYTANR--ITPKSNTAILNNSPFGSSQQTTLGTTTQSTLFGSNNQTSAFGSKTLFGNTPTSTNSAFGSFNNQTKPGALFGTSTQNKPLFGT---------------TQPTQSTSLFGSQQQTST-SSLFGNQTQTGLFGGLQSQQQ------------------------PNQLF-NTNTSTSSFGFQSQPTTGFFGASNAA 248

[Close]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Planmine SMEST
Match: SMESG000022283.1 (SMESG000022283.1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.962e-12
Identity = 80/250 (32.00%), Postives = 107/250 (42.80%), Query Frame = 3

Query:   30 GTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKSSEELRFEDYKCNRMSVTLNSTNGIQNNSQIXXXXXXXXXXXXXTINKQSNN---------LFGANST---GAFGSPVNTNQSNNLFGSNS--TGAFGSPVXXXXXXXXXXXXXXXXXXXXXLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHXXXXXXXXXXXXXXXXXVNSTIAPNNLFGNHNSTNNTATFQG---TGLFGAANAS 728
            GT +K+V L G D ++KNN    + T LN  S MKEYE KS EELR EDY  NR  +T  S   I NNS        +  +   +    SNN         LFG   T    AFGS  N  +   LFG+++     FG+                    S++LFG+Q   +  ++ FGN     LFG   + Q                         PN LF N N++ ++  FQ    TG FGA+NA+
Sbjct:   42 GTTIKYVPLNGTDTIQKNNQTVNVSTKLNCISAMKEYEMKSLEELRLEDYTANR--ITPKSNTAILNNSPFGSSQQTTLGTTTQSTLFGSNNQTSAFGSKTLFGNTPTSTNSAFGSFNNQTKPGALFGTSTQNKPLFGT---------------TQPTQSTSLFGSQQQTST-SSLFGNQTQTGLFGGLQSQQQ------------------------PNQLF-NTNTSTSSFGFQSQPTTGFFGASNAA 248

The following BLAST results are available for this feature:

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Celegans
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Fly
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. UniProt/SwissProt
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Cavefish
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Sea Lamprey
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Yeast
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Nematostella
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Medaka
BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Planmine SMEST

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
NUP98	3.674e-7	48.15	nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068]	[more]
NUP98	4.038e-7	48.15	nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068]	[more]
NUP98	9.489e-7	48.15	nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068]	[more]
NUP98	2.428e-6	48.15	nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068]	[more]
NUP98	2.716e-6	48.15	nucleoporin 98 [Source:HGNC Symbol;Acc:HGNC:8068]	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
npp-10	4.640e-6	42.86	Nuclear pore complex protein Nup98-Nup96 Nuclear p...	[more]
npp-10	4.642e-6	42.86	Nuclear pore complex protein Nup98-Nup96 Nuclear p...	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1


Match Name	E-value	Identity	Description
Nup98-96	1.361e-6	30.33	gene:FBgn0039120 transcript:FBtr0304567	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4


Match Name	E-value	Identity	Description
nup98	3.371e-8	48.15	nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-11...	[more]
nup98	1.497e-6	48.15	nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-11...	[more]
nup98	1.498e-6	48.15	nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-11...	[more]
nup98	1.524e-6	48.15	nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-11...	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4


Match Name	E-value	Identity	Description
nup98	3.328e-6	48.15	nucleoporin 98 [Source:NCBI gene;Acc:100145055]	[more]
nup98	3.727e-6	48.15	nucleoporin 98 [Source:NCBI gene;Acc:100145055]	[more]
nup98	5.413e-6	48.15	nucleoporin 98 [Source:NCBI gene;Acc:100145055]	[more]
nup98	5.859e-6	48.15	nucleoporin 98 [Source:NCBI gene;Acc:100145055]	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Nup98	3.679e-7	48.15	nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]	[more]
Nup98	3.766e-7	48.15	nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]	[more]
Nup98	4.051e-7	48.15	nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]	[more]
Nup98	4.115e-7	48.15	nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]	[more]
Nup98	2.056e-6	48.15	nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2J7PID8	1.569e-9	51.67	Uncharacterized protein (Fragment) OS=Cryptotermes...	[more]
A0A1B6F308	2.099e-8	56.86	Uncharacterized protein (Fragment) OS=Cuerna arida...	[more]
A0A1B6MB10	2.171e-8	56.86	Uncharacterized protein (Fragment) OS=Graphocephal...	[more]
A0A1B6M0Q2	2.238e-8	56.86	Uncharacterized protein (Fragment) OS=Graphocephal...	[more]
A0A1B6J241	2.354e-8	56.86	Uncharacterized protein (Fragment) OS=Homalodisca ...	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
nup98	7.340e-7	48.15	nucleoporin 98 [Source:NCBI gene;Acc:103032416]	[more]
nup98	7.365e-7	48.15	nucleoporin 98 [Source:NCBI gene;Acc:103032416]	[more]
nup98	7.756e-7	48.15	nucleoporin 98 [Source:NCBI gene;Acc:103032416]	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000002346.1	8.790e-9	48.33	pep scaffold:Pmarinus_7.0:GL477945:9692:37886:-1 g...	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
nup98	1.912e-7	48.28	nucleoporin 98 [Source:NCBI gene;Acc:101172463]	[more]
nup98	1.343e-6	50.00	nucleoporin 98 [Source:NCBI gene;Acc:101172463]	[more]

BLAST of Nuclear pore complex protein Nup98-Nup96 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000022300.1	5.105e-152	99.66	SMESG000022300.1	[more]
SMESG000022283.1	6.653e-12	32.00	SMESG000022283.1	[more]
SMESG000022283.1	6.962e-12	32.00	SMESG000022283.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30022556 ID=SMED30022556|Name=Nuclear pore complex protein Nup98-Nup96|organism=Schmidtea mediterranea sexual|type=transcript|length=894bp
CATCGATTGGCACTACACAAAATATAATTGGAACTCCTGTCAAATTTGTT
GCTCTTTTAGGTCAAGATGTAGTTAAAAAAAATAACTTTGACACCACCAT
TAAAACTCTGTTAAATCATACATCAGGAATGAAAGAATATGAAAACAAAT
CCTCCGAGGAATTGAGATTTGAAGATTATAAATGCAATAGAATGAGTGTG
ACATTAAATTCTACAAATGGAATCCAGAATAACAGTCAAATTAGCGGCTT
CAATCCAAATTCAAACAACTCATTCGGATCGACTATTAACAAACAATCGA
ATAATTTATTCGGTGCTAATTCAACTGGTGCATTTGGATCACCAGTGAAT
ACTAACCAATCAAATAATTTATTCGGTTCTAATTCTACTGGTGCATTTGG
ATCACCGGTAAATGCTAACCAATCAAATAACAATCAAGGGAGTAATCGTT
TTGGAAATAACAATTCTTCAAATTTATTTGGTGCACAAGCTAATAATGCA
CAACCTAACAATACCTTTGGTAATAATGCAAATAAAAGCTTATTTGGAAA
TAATACGAACAGCCAATCTCATAATACAAACTTCGGTCAAAACACGTTTA
CTGCAACAAATACCAATCAACAAGTTAATTCCACAATAGCACCCAACAAT
TTATTTGGTAACCATAATTCTACAAACAATACGGCAACATTTCAAGGAAC
TGGGTTATTTGGAGCTGCAAATGCTTCTACCAATCAATTTGGAAATCCAC
AAATTGAATTAAATCAAAAGACAACTCTCGATTTCAATAATAACTCAGTC
GGAAATTCGAATACTTTTGGCCAGAGTAATCAGAATAGTATTTTTAACAA
TCAACCATCATTACAAAATAGTCAAGCTAAAGCTCCTGGTGGTC

protein sequence of SMED30022556-orf-1

>SMED30022556-orf-1 ID=SMED30022556-orf-1|Name=SMED30022556-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=297bp
SIGTTQNIIGTPVKFVALLGQDVVKKNNFDTTIKTLLNHTSGMKEYENKS
SEELRFEDYKCNRMSVTLNSTNGIQNNSQISGFNPNSNNSFGSTINKQSN
NLFGANSTGAFGSPVNTNQSNNLFGSNSTGAFGSPVNANQSNNNQGSNRF
GNNNSSNLFGAQANNAQPNNTFGNNANKSLFGNNTNSQSHNTNFGQNTFT
ATNTNQQVNSTIAPNNLFGNHNSTNNTATFQGTGLFGAANASTNQFGNPQ
IELNQKTTLDFNNNSVGNSNTFGQSNQNSIFNNQPSLQNSQAKAPGG

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:0006913	nucleocytoplasmic transport
GO:0006810	transport

Vocabulary: **molecular function**
Term	Definition
GO:0017056	structural constituent of nuclear pore

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000074	oocyte
PLANA:0000231	vitelline gland

Vocabulary: **INTERPRO**
Term	Definition
IPR037665	Nucleoporin_S59-like

Vocabulary: **cellular component**
Term	Definition
GO:0005643	nuclear pore

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.2360		coord: 9..64 e-value: 3.5E-16 score: 60.9
IPR037665	Nucleoporin peptidase S59-like	PANTHER	PTHR23198	NUCLEOPORIN	coord: 30..289

Main menu

Nuclear pore complex protein Nup98-Nup96

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

blazegraph-runner