SMED30022534
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30022534 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 27
Alignments
SMED30022534 aligns in the following genomic locations:
Homology
BLAST of SMED30022534 vs. Planmine SMEST
Match: SMESG000064314.1 (SMESG000064314.1) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 363/426 (85.21%), Postives = 385/426 (90.38%), Query Frame = 1
Query: 10 VNETDHSDDQNDGELAKQIIIEIDEVEKNI----LDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
V+ET+ + N ELA II+++E K L++V VDE D+S + N+ +E + EV + Q ++V+ + SK+D+ D S++LNESELAESNISEVDE ETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNII VDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE
Sbjct: 1362 VDETEEFINPNRSELADHNIIKVEEETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1787 HSP 2 Score: 590.882 bits (1522), Expect = 0.000e+0 Identity = 339/425 (79.76%), Postives = 364/425 (85.65%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNV+ELENSVILNENTLTE IKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQ+QVNS++VI V K S +P+ E +PN + E +KNI EESNVK L V E HS DQ + EL E NI +D+ E+NI+ N+ E SKVD+IDHS + NE E++K E Q + V S+E S++ EK S +PN+ E E
Sbjct: 2089 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESANSNINEVNKKETKQQELVNSKELSEVYEKDNSYNPNKKEFVE 2513 HSP 3 Score: 259.225 bits (661), Expect = 3.185e-76 Identity = 222/500 (44.40%), Postives = 292/500 (58.40%), Query Frame = 1
Query: 7 NVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVN------------------------------------LDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVD-NVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNS----------------DD-------------------------PNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPA 1272
NV++T HS DQN+ ELA Q II+ID+ EKNILDQVNV+ +TDHS + NK + +E INEVD + KQQ++V+ D VSKVD KD+S++ NESEL E N+ E+DE E E+ N +E+ NV+ TDHS + N+ ELA+Q IIE+D ++NI ++VN LD VSKVD+ D+ ++ NESE AESNI++VDE ETKQ EQVN EEVSNV ++S NE+ L E EVD + NI N +E SKVDE D + PN+SE AESNIN VDE ETKQQ+QVN E+V V E NS D+ PN E + N+ VDEEE E+ N + NVD K+ S + +SEL EPN + E ++NI+ ++N+KE KV + +HSV+ NE L E EIDK+E+ +D V +E SK+DE +SADPNESE A
Sbjct: 1973 NVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISE-KVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQEQVNSDEVINVDVKDKSVNPDESELGEPNCIEIVEVDKNISEESNVKELLKVTETNHSVDQNEGELDEQNIIEIDKSEKNISDQVNVDELSKVDEIDHSADPNESESA 2471 HSP 4 Score: 251.136 bits (640), Expect = 1.823e-73 Identity = 208/442 (47.06%), Postives = 270/442 (61.09%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV---------------VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVEN-IQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQ-VNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
L ++E D S N+ +LA+ IIEID+ E N+ D V V +ETDHSA+ + EP+ES INE E + Q+K +L+ +SKV +KD S + NESE +ES I+EVDE E KQ EQVN EEVS V+ D+S +PNE LAE I+E+D K NI++ VNL+E+SKVDE D D NE+E +ESNIN+VDEGE KQQEQVN E VS V E +NS N+ + E + ++ + N N E SK+ E D S PN+SE AE NIN VDEEE KQQ Q N E+ +V EK NSDDPN E ++P++KN+ E EKNI EESNVK L+ V K+HS DQI+ + EERNIT D N K+ S VD+ DH+ + NE E E+D+ E E+SK+DEK S DP ++E E
Sbjct: 3226 LSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEK-FNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNS---NDPSEIEPAESNINEFGGEMTNEKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEG----------NSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSE------EESKVDEKDNSDDPYKNELVE 3647 HSP 5 Score: 247.669 bits (631), Expect = 2.737e-72 Identity = 210/517 (40.62%), Postives = 276/517 (53.38%), Query Frame = 1
Query: 10 VNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRS------------------------INL---------------NESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEH-----------------------------------------STDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKL----------DEKYYSADPNESEPAE 1275
++E D S D N EL++ IIEID+VEKNI D VNV V+ETD +AN N+SEP ES I EVD + KQ+++V+L+ VSKV++ D S NL NE E+ + NI +DE ET E+ N E+S +D D S PNE +LAE IIE+D K NI++ VNL+E+SKVDE D NE+E +E NIN+VDEGE KQQEQVN E VS V E +NS NE L + E+D EN N +E SKVDE HS +SEP+E NIN+VDE E KQQ+Q N E+V++V +K NSDDPN E ++ ++ +D+ E NI + NV +S V+E +H S D +SE+ EPNI+NV E E +I+ + N+ E SK+D+ID SV NE L E EID+ E D V +E S +E +SAD E EPAE
Sbjct: 2780 IDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSEPDDSNINELGGKMTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAE 3296 HSP 6 Score: 245.743 bits (626), Expect = 1.195e-71 Identity = 220/545 (40.37%), Postives = 297/545 (54.50%), Query Frame = 1
Query: 7 NVNETDHSDDQNDGELAKQIIIEIDEVEKNI-----LDQVNVVDETDHSANSNKSEPSESKINEVDE---------------------------ADW-------------KQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVD----------NVENIQNV----HANSEEESK----------------------VDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDH-----------------------------------------SVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
NV++TDHS D N+ +LA+Q IIE+D E+NI L++V+ V ETD S + N++EP+ES IN+VDE +D+ KQ K+++LD VSK+D+ D S++ NES+ ESNI EVD+ E Q EQVNSEEVSNVD T HS + NE ELA QNII++D ++NI LD+V+ + + D VDPN+ + AE NIN+VD GE KQQEQVN +EVS V + SV NE+ L E E+D NV+ + NV H++ + + + VDETDHS N+SEP+ES IN+VDE + KQQ +V+ + V +V +K S + N E + N+ VDE E +E+ N + +SNVD +HS + + ELAE NI VD ++RNI+ NL E SKVD+ID SV LNE TLTEPI KE+D E Q H SEE+SK+DE +S PN+SEPAE
Sbjct: 1811 NVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINLD-VSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNI-----LDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVFELENSVILNENTLTEPIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAE 2349 HSP 7 Score: 242.662 bits (618), Expect = 1.538e-70 Identity = 217/494 (43.93%), Postives = 279/494 (56.48%), Query Frame = 1
Query: 16 ETDHSDDQNDGELAKQIIIEIDE----VEKNILDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVD-----------------------------------------LDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQ-VNFEEVSNVYELENSVILNENTLTES-IKKEVDNVENIQ-------------------NVHANSEEE-----------SKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESE 1266
ETDHS DQ + E A+ I E E EK L+ ++ V E D S +SN+SEPSES INEVDE + KQQ++V+ L+ +SKVD++D S +LNE+E +ESNI+EVDE E KQ EQVN E VS V+ D+S +P+E E AE NI E + N EK NL E SK+ E D DPN+SE AE NIN VDE E KQQ+Q NFEE S V+E +NS NEN L E IK V+ +NI + NSEE S VDETDH+ N+SEPAESN N+VDEEE +++ +V EK NSDDP E ++P +KN + EKNI ES +K L VD+ EHS +Q+K ++ EERNIT DANL++ S+VD+IDHSVN NE+TLT E+DK ++ Q + EE SK+DE ++SA+PNESE
Sbjct: 3282 ETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEFGGEMTN--EKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEEES------KVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSVNQMKCKI----------EERNITDDANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESE 3757 HSP 8 Score: 239.58 bits (610), Expect = 1.484e-69 Identity = 208/477 (43.61%), Postives = 272/477 (57.02%), Query Frame = 1
Query: 16 ETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVD---------------------------------------------------EKEHSTDQIKSELAEPNIRNVDEEERNITAD-ANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
E D S D N+ E+ + I +DE E NI ++ NV +DE D S N+S+ +E I E+D++ V+L+ +SKVD+K S +LNE+E +E NI+EVDE E KQ EQVN E VS V+ D+S +PNE ELA+ NI E+D + NI++ VN+DEVSKVDE D ESE +E NIN+VDEGE KQQEQ N EEV V + +NS N++ L ES E+D EN H N +E SKV+ETDH+ N+SEP ESNI +VDE E KQQ+QVN E+V +V EK +S D N E ++PN+KNV E E +I EE NV LS +D E +HS DQI+ E AE NI EEE IT + NL++ SKV + D S + NE +E E+D+ E Q + V EE SK++EK S DPNES AE
Sbjct: 2903 ENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEE--ITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAE 3377 HSP 9 Score: 238.039 bits (606), Expect = 4.905e-69 Identity = 204/466 (43.78%), Postives = 277/466 (59.44%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKS------------------------------------LSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
L NV+E +HS DQ ELA+ I +DE E+NI N+ VD+ DHS N N+ +E E+D+ + Q V + SK+D+K S + NESE AESNI+EVD+ E KQ ++++ EEVSNVD TDHS + NE +LAEQNIIEVDV +RNISE+ NL+EVS V E D VD NE+E ESNIN VDE ET QEQ+ EEVS V E + SV NE+ E K+VD E Q+ N + SK+DETDHS+ N+S+P ESNI +VD+ E QQ+QVNSE+V V + Y+S D N E + N+ +D+ EKNI+++ NV +S VD K+ S D +SEL EPN+ +DE E+NI+ +N+KE V++ DHS + N+ L + I EID+ E+ D V + +DE +SA+ N+SEP+E
Sbjct: 1686 LSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEET-TQEQLISEEVSKVGEKDVSVDPNESDFVEHNIKKVDEDEKKQHKQINL-DVSKLDETDHSVDTNESKPVESNIIEVDDGEWTQQEQVNSEEVSNVDKTYHSVDQNESELANQNIIKIDKGEKNILDQVNVLYKTDHSVDPNKIKLAEFNINEVDNGEPKQQEQVNSDEVSKVDVKDKSVDTNESELCEPNVIEIDEVEKNISEKSNVKELLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQV-----NVVDETDHSANSNKSEPSE 2144 HSP 10 Score: 230.72 bits (587), Expect = 1.786e-66 Identity = 209/522 (40.04%), Postives = 277/522 (53.07%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELA-----------------------------------------ESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVS----------------------NVY-------------------ELENSVILNENTLTESIKKEVDNVEN----------IQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
L ++E D S N+ +LA+ IIEID+ + NI D VN+ VDE HSA+ N++EPSE INEVDE + KQQ++V+ +GVSKV++KD S + NE ELA E NI+EVDE E KQ EQ N EEV V+ D+S +PN+ EL E +IIE+D + NI++ VN+DEVSKV+E D + NESE ESNI +VDEGE KQQEQVN EEVS NVY E++ SV NE+ L E E+D EN N + + +ETDHS + EPAESNIN+ EEE Q+ + N E + +V EK +S D N E + + VDE E E+ N + +S V+EK++S D +S LAE I +D+ + NIT NL E SKVD+ DHS +LNE +E E+D+ E Q + V E SK++EK S DP+E EPAE
Sbjct: 2939 LSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQHNITEIDQGENNIADSVNVDEVSKVDEKYHSADSKESEPSEDNINEVDEGEPKQQEQFNPEEVLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQE-KFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAE 3459 HSP 11 Score: 228.409 bits (581), Expect = 1.173e-65 Identity = 213/512 (41.60%), Postives = 274/512 (53.52%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNIS--------------------------------------------------EKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEE-RNITADANLKEESKVDKIDHSVNLNEKTLTEP--------------------ITKEIDKN-----------EQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
+L VN+ D+SDD N EL + IIEID+ E NI D VNV V+ETDH+ N N+SEP ES I EVDE + KQQ++V+ + VSKV++K S + NESE+ E NI V E ET E+ N E+S +D D S NE +LAE IIE+D + N++ EK NL+++SKV E D D NESE +ES IN+VDEGE KQQEQVN EEVS V E +NS NE+ L E E+D +N N E SKVDE DHS N++EP+ESNIN+VDE E KQQ+QVN E V +V EK NS+DP+ E + N+ E N E+ N+ S + EK+ S D KSELAE NI VDEEE + + N +E SKV + D+S + NE L EP +TK K E+ TD V ++ S +DE ++ D NESEPAE
Sbjct: 3103 VLKVNKKDNSDDPNQSELVESHIIEIDQGENNIADHVNVDEVSKVEETDHTGNLNESEPYESNIKEVDEGEPKQQEQVNPEEVSKVNEKGDSGDTNESEIVEPNIKNVYEGETDISEEPNVNELSKIDEIDRSVYTNESKLAEHYIIEIDQGENNVADPVYVDEGSNFYGKDDSGDLNEETDHSADQIEREPAESNINEAGEEEITQEKFNLEDLSKVYEKDDSGDSNESEPSESYINEVDEGEPKQQEQVNPEEVSKVNEKDNSYDPNESGLAEYYIVEIDQGKNNITDPVNLNEISKVDEEDHSADLNENEPSESNINEVDEGEPKQQEQVNPEGVSKVNEKDNSNDPSEIEPAESNINEFGGEMTN--EKFNLVEASKIFEKDDSFDPNKSELAELNINGVDEEEPKQQQQNFNFEEASKVHEKDNSDDPNENELVEPHIKNIVEGEKNISEESNVKELTKVFGKQHSFDQIEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAE 3612 HSP 12 Score: 228.409 bits (581), Expect = 1.380e-65 Identity = 185/427 (43.33%), Postives = 249/427 (58.31%), Query Frame = 1
Query: 10 VNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVV-----DETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
V+ETDHS D N+ E + I EI + EKNI D+VNV DE+DHS + NKSEP +S INE++ KK++LD V KVD+ + S++ NE E+ ESNI V+E +T E+ N E S +D D S +PN+ EL+E IIE+D ++NIS+ VN+DEVSKV+E D+ + NESE ESNI +VD GE KQ+EQVN EEV SKV+E D+S PN SEP +SNIN++ + T ++ N E+V + E +S DPN E + PN+K +DE E NI EESNV LS +DE + S +S+LAE I +D+ + NIT NL E SKVD+ HS +LNE +E E+D+ E Q + V E SK++EK S DPNE E A+
Sbjct: 2659 VDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGE--ITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEV-----------------------------------------SKVNENDYSRDPNGSEPDDSNINELGGKMT--HEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSEYNINEVDEGEPKQQEQVNPEGVSKVNEKDNSYDPNECELAQ 3040 HSP 13 Score: 215.312 bits (547), Expect = 4.058e-61 Identity = 206/469 (43.92%), Postives = 271/469 (57.78%), Query Frame = 1
Query: 10 VNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISE-KVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILN----------------ENTLTESIKKEVDNVE----------------NIQNV---------HANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
++ETDHS D N+ ELA+ I E+DE E L+QVN VD TDHS N+ E +E I VD +KV+LD VSKVD+ D+ ++ NESE AESNI++VDE ETKQ EQVN EEVSNV ++S NE+ L E EVD + NI N +E SKVDE D + PN+SE AESNIN VDE ETKQQ+QVN E+V V E NS N +N + ES K + NV+ NI+NV AN +EESKVD+ DHS+ N+ E ++D+ E Q D V SE+ ++ EKY S DPN E + N+ VD+ E+ ++ +++ +SNVD+ +HS D +S+LAE NI VD ERNI+ NL+E S V + D SV+LNE TE ++D+ E TQ + +ISEE SK+ EK S DPNES+ E
Sbjct: 1443 LDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVD-NVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAESNINEVDKAERKQQKKIDLEEVSNVDKTDHSADSNESKLAEQNIIEVDVGERNISEQDNLEEVSNVFETDPSVDLNENEPTESNINKVDEEETTQ-EQLISEEVSKVGEKDVSVDPNESDFVE 1909 HSP 14 Score: 205.682 bits (522), Expect = 7.622e-58 Identity = 164/341 (48.09%), Postives = 221/341 (64.81%), Query Frame = 1
Query: 256 RSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEK-VNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNIIEESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
R+ NLNE++ I+++ E + E N ++ +D D+S +P E E I ++D + I +K VNL+EV KVDE ++F++PN SE A+ NI V+E ETK+QEQ+N EEV+NV E + SV NE TLTE I KEV NVENIQ NSEE SK+DETDHS+ N+SE AESNI++VDE ETKQ +QVNSE+V V +S +PN E + N+ VD +++NI E+ N+ +S VDE + D +SE AE NI +VDE E N +E S V ++++SV LNE TLTE I KE+D E Q H SEE+SK+DE +S PN+SEPAE
Sbjct: 1291 RADNLNETQ-----INKLGENVDQVNETFNLYVMTKMDQKDNSVDPYESAHIEAKINKID--EETIKQKQVNLEEVPKVDETEEFINPNRSELADHNIIKVEE-ETKKQEQINLEEVTNVDERDYSVDQNEITLTEPIMKEVYNVENIQIQRVNSEENSKLDETDHSVDLNESELAESNISEVDEGETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIGVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAE 1623 HSP 15 Score: 184.882 bits (468), Expect = 1.118e-50 Identity = 183/470 (38.94%), Postives = 265/470 (56.38%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESA---------------------------------------ESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEETKQQDQVNSEKVIEVVEKYNSDDPNYGEFIDPNMKNVDEEEKNII-EESNVKSLSNVDEKEHSTDQIKSELAEPNIRNVDEEERNITADANLKEESKVDKIDHSVNLNEKTLTEPITKEIDKNEQTQTDHVISEEKSKLDEKYYSADPNESEPAE 1275
L ++ T HS D+N+ ELA+ I ++E E++++ N+ VDE +S + N++ +E EVD + Q V + + K D+ + S++ E E AESNI EVDE E Q E+ N +EVS VD TDHS +PNE E + NI E+ ++NIS+KVN+D+VSK DE D VDPN+SE ESNI +V+EG+T E+ N E S + E + SV N++ L+E E+D VE + N +E SKV+ETD + N+SEP ESNI +VD E KQ++QVN E+V +V E S DPN E P+ N++E + E+ N++ +S E + S D + E+ +PNI+ +DE E NI+ ++N+ E SK+D+ID SV NE L E EID+++ TD V E SK+DEK +SAD NE+EP+E
Sbjct: 2535 LSMIDGTKHSVDENEEELAELNIKNVNEKERSLIYNANLIEVSKVDEIYYSEDPNENTLTEPITKEVDNIENIQTDYVKSEEL-KADETEYSVDQIERESAESNIDEVDEEEITQ-EKFNLKEVSKVDETDHSVDPNESEPSGSNINEIGQGEKNISDKVNVDQVSKDDESDHSVDPNKSEPGKSYINEIEGEITHKKINLDEVPKVDENNDSVDPNEIEIVESNIENVEEGKTNLSEESNINESSTIDEPDLSVDPNKSELSEHYIIEIDQVEKNISDPVNVDEVSKVEETDRTANLNESEPYESNIKEVDVGEPKQKEQVNLEEVSKVNENDYSRDPNGSE---PDDSNINELGGKMTHEKFNLEEVSKARENDDSVDPNEREIVQPNIKCLDEGETNISEESNVNELSKIDEIDRSVYPNESKLAEHYIIEIDQSKNNITDPVNLNEISKVDEKGHSADLNENEPSE 2999 HSP 16 Score: 119.398 bits (298), Expect = 1.380e-28 Identity = 110/288 (38.19%), Postives = 145/288 (50.35%), Query Frame = 1
Query: 70 IEIDEVEKNILDQVNV-----VDETDHSANSNKSEPSESKINEVDEADWKQQK--KVD---------------------------------LDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQEQVNFEEVSNVYELENSVILNENTLTESIKKEVDNVENIQNVHANSEEESKVDETDHSIFPNQSEPAESNINKVDEEE 813
IE + E+NI D VN VDETDH+ +SN+SEP+ES NEVDE + ++ KVD L + KVDK + S+N + ++ E NI++ N ++S VD DHS NE L N+IEVD ++N E NL+E+SKVDEI +PNESE ESNI +VDEGET QQ+QVN NE+T E EVD E Q H N EEES VD+ D+ + P +S + ++NKV E E
Sbjct: 3575 IEGNSEERNITDDVNYKDVSHVDETDHADDSNESEPAESNFNEVDEEEGNSEEESKVDEKDNSDDPYKNELVEPLIKNFNVGEKNISGESCLKDLLKVDKTEHSVNQMKCKIEERNITD----------DANLRDLSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQVN---------------PNESTPIECNTNEVDGGEKYQTEHVNLEEESMVDKIDNFVDPKESPFTKPDVNKVSEGE 3837 HSP 17 Score: 67.0106 bits (162), Expect = 1.854e-11 Identity = 68/199 (34.17%), Postives = 88/199 (44.22%), Query Frame = 1
Query: 1 LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNI-----LDQVNVVDETDHSANSNKSEPSESKINEVDEADWKQQKKVDLDGVSKVDKKDRSINLNESELAESNISEVDERETKQLEQVNSEEVSNVDITDHSGEPNEHELAEQNIIEVDVDKRNISEKVNLDEVSKVDEIDQFVDPNESESAESNINDVDEGETKQQE 582
L V+E DHS + N+ L +IE+D+ +KN L++++ VDE HSAN N+SE ES I EVDE + QQK+V N NES E N +EVD E Q E VN EE S VD +ID FVDP ES + ++N V EGE + E
Sbjct: 3700 LSQVDEIDHSVNSNERTLTGDNVIEVDKGQKNQHEPANLEEMSKVDEIHHSANPNESELDESNIYEVDEGETNQQKQV---------------NPNESTPIECNTNEVDGGEKYQTEHVNLEEESMVD-----------------------------------------KIDNFVDPKESPFTKPDVNKVSEGEKNKAE 3842 The following BLAST results are available for this feature:
BLAST of SMED30022534 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30022534 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30022534 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30022534 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30022534 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30022534 ID=SMED30022534|Name=SMED30022534|organism=Schmidtea mediterranea sexual|type=transcript|length=1276bpback to top protein sequence of SMED30022534-orf-1 >SMED30022534-orf-1 ID=SMED30022534-orf-1|Name=SMED30022534-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=425bp LLNVNETDHSDDQNDGELAKQIIIEIDEVEKNILDQVNVVDETDHSANSNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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