G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30022430 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Match: MsR2 (gene:FBgn0264002 transcript:FBtr0330360) HSP 1 Score: 66.2402 bits (160), Expect = 4.741e-11 Identity = 44/151 (29.14%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLL---RTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKY 821 YF +CI+G+I N +N +VLTR + + T +++ LA D + +L TV Y+ LP E L Y F+ + V + +S W+T+ LAV YI + + ++R++C + + I + LV P+ +L+T K+ Sbjct: 28 YFSLIVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPREE--QLSYSWACFIKFHSV-FPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIWCGMRTTLITIATAYVVCVLVVSPWLYLVTAIAKF 175
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Match: MsR2 (gene:FBgn0264002 transcript:FBtr0330359) HSP 1 Score: 65.4698 bits (158), Expect = 7.162e-11 Identity = 47/158 (29.75%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLL---RTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKY-ETNQRN 839 YF +CI+G+I N +N +VLTR + + T +++ LA D + +L TV Y+ LP E L Y F+ + V + +S W+T+ LAV YI + + ++R++C + + I + LV P+ +L+T K+ ET N Sbjct: 28 YFSLIVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPREE--QLSYSWACFIKFHSV-FPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIWCGMRTTLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDAN 182
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Match: MsR2 (gene:FBgn0264002 transcript:FBtr0330358) HSP 1 Score: 65.4698 bits (158), Expect = 7.162e-11 Identity = 47/158 (29.75%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLL---RTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKY-ETNQRN 839 YF +CI+G+I N +N +VLTR + + T +++ LA D + +L TV Y+ LP E L Y F+ + V + +S W+T+ LAV YI + + ++R++C + + I + LV P+ +L+T K+ ET N Sbjct: 28 YFSLIVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTVHDYILSVRLPREE--QLSYSWACFIKFHSV-FPQVLHTISIWLTVTLAVWRYIAVSYPQRNRIWCGMRTTLITIATAYVVCVLVVSPWLYLVTAIAKFLETLDAN 182
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Match: MsR1 (gene:FBgn0035331 transcript:FBtr0072887) HSP 1 Score: 63.929 bits (154), Expect = 1.950e-10 Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLL---RTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKY 821 Y +CI+G+I N +N +VLTR + + T +++ LA D + +L T+ Y+ ++LP E L Y F+ + + + +S W+T+ LAV YI + + K+R++C + + I + LV P +L+T +Y Sbjct: 30 YVSLVVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTIHDYILTDSLPREE--KLSYSWACFIKFHSI-FAQVLHTISIWLTVTLAVWRYIAVGYPQKNRVWCGMRTTIITITTAYVVCVLVVSPSLYLITAITEY 177
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Match: MsR1 (gene:FBgn0035331 transcript:FBtr0330187) HSP 1 Score: 64.3142 bits (155), Expect = 1.988e-10 Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLL---RTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKY 821 Y +CI+G+I N +N +VLTR + + T +++ LA D + +L T+ Y+ ++LP E L Y F+ + + + +S W+T+ LAV YI + + K+R++C + + I + LV P +L+T +Y Sbjct: 30 YVSLVVCILGTIANTLNIIVLTRREMRSPTNAILTGLAVADLAVMLEYIPYTIHDYILTDSLPREE--KLSYSWACFIKFHSI-FAQVLHTISIWLTVTLAVWRYIAVGYPQKNRVWCGMRTTIITITTAYVVCVLVVSPSLYLITAITEY 177
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: W6UXS1 (Putative G-protein coupled receptor OS=Echinococcus granulosus OX=6210 GN=EGR_01868 PE=4 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.100e-40 Identity = 134/351 (38.18%), Postives = 190/351 (54.13%), Query Frame = 3 Query: 375 IYFQFPICIIGSILNFINFLVLTRIGI-SNATYILMSALAFTDASTLLLRTVQ--TYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQK---AQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSF 1409 +Y Q IC+IG ILN IN V R S Y+L+ AL+ DA TL LR Q TY R + + YI+ YAEVPITN+TEN+S W+T+ LA+E Y+ M+ + +R Y T +N+K+LI + +S L NLP+F + K N + I A +R S FY ++SW R IVQ+ PL+ LC+ N LL + VY+ N+ F N + + + S L + E + +S + LI ++QK AQ KL ILLI +I+LFL G IP AF+Y+ I F C++ + CP + +YR VT + L Y L FF+Y FLN H++N Sbjct: 33 VYVQPCICLIGFILNIINIYVFQRKTFCSTPAYMLVLALSIADAITLGLRIPQGLTYYRGSS---SVTQTMAIYAYIYATYAEVPITNMTENMSAWLTVCLALERYVAMRHWNFARQYSTRQNTKRLIISIALVSVLFNLPYFMIHRIEFKRFANGSMRVITNATALRR----STFYTVYSWFRMTIVQIIPLVFLCILNVLLITIVYQHNKK-FGKNTE----VEQKSNHL----SLGTEGTGADETSLKDTTVGDLQLIQRRQKKRNAQRKLNILLIAVILLFLFGAIPQAFSYIRIFEAFGTCEEAFHY--CPTYVVYRMVTTNIALISYGLTFFLYFFLNQHFRNEL 365
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A068WK46 (G protein coupled receptor OS=Echinococcus granulosus OX=6210 GN=EgrG_000234800 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.157e-40 Identity = 134/351 (38.18%), Postives = 190/351 (54.13%), Query Frame = 3 Query: 375 IYFQFPICIIGSILNFINFLVLTRIGI-SNATYILMSALAFTDASTLLLRTVQ--TYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQK---AQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSF 1409 +Y Q IC+IG ILN IN V R S Y+L+ AL+ DA TL LR Q TY R + + YI+ YAEVPITN+TEN+S W+T+ LA+E Y+ M+ + +R Y T +N+K+LI + +S L NLP+F + K N + I A +R S FY ++SW R IVQ+ PL+ LC+ N LL + VY+ N+ F N + + + S L + E + +S + LI ++QK AQ KL ILLI +I+LFL G IP AF+Y+ I F C++ + CP + +YR VT + L Y L FF+Y FLN H++N Sbjct: 41 VYVQPCICLIGFILNIINIYVFQRKTFCSTPAYMLVLALSIADAITLGLRIPQGLTYYRGSS---SVTQTMAIYAYIYATYAEVPITNMTENMSAWLTVCLALERYVAMRHWNFARQYSTRQNTKRLIISIALVSVLFNLPYFMIHRIEFKRFANGSMRVITNATALRR----STFYTVYSWFRMTIVQIIPLVFLCILNVLLITIVYQHNKK-FGKNTE----VEQKSNHL----SLGTEGTGADETSLKDTTVGDLQLIQRRQKKRNAQRKLNILLIAVILLFLFGAIPQAFSYIRIFEAFGTCEEAFHY--CPTYVVYRMVTTNIALISYGLTFFLYFFLNQHFRNEL 373
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A087W1C0 (G protein coupled receptor OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000234800 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.402e-39 Identity = 134/348 (38.51%), Postives = 187/348 (53.74%), Query Frame = 3 Query: 375 IYFQFPICIIGSILNFINFLVLTRIGI-SNATYILMSALAFTDASTLLLRTVQ--TYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSF 1409 +Y Q IC+IG ILN IN V R S Y+L+ AL+ DA TL LR Q TY R + + YI+ YAEVPITN+TEN+S W+T+ LA+E Y+ M+ + +R Y T + +K+LI + +S L NLP+F + K N + I A +R S FY ++SW R IVQ+ PL+ LC+ N LL + VY+ N+ F N + + S L + A E S + +L R KK+ AQ KL ILLI +I+LFL G IP AF+Y+ I F C++ + CP + +YR VT + L Y L FF+Y FLN H++N Sbjct: 41 VYVQPCICLIGFILNIINIYVFQRKTFCSTPAYMLVLALSIADAITLGLRIPQGLTYYRGSS---SVTQTMAIYAYIYATYAEVPITNMTENMSAWLTVCLALERYVAMRHWNFARQYSTRQITKRLIISIALVSVLFNLPYFMIHRIEFKRFANGSMRVITNATALRR----STFYTVYSWFRMTIVQIIPLVFLCILNVLLITIVYQHNKK-FGKNTEVEQKGNHLS--LGTEGTGADETSLKDTTVGDSQLIQRR---QKKRNAQRKLNILLIAVILLFLFGAIPQAFSYIRIFEAFGTCEEAFHY--CPTYVVYRMVTTNIALISYGLTFFLYFFLNRHFRNEL 373
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3X330 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS7715 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.033e-38 Identity = 132/350 (37.71%), Postives = 190/350 (54.29%), Query Frame = 3 Query: 375 IYFQFPICIIGSILNFINFLVLTRIGI-SNATYILMSALAFTDASTLLLRTVQ--TYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSI--KAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSF 1409 +Y Q IC+IG ILN IN V R S Y+L+ AL+ DA TL LR Q TY R + + YI+ YAEVPITN+TEN+S W+T+ LA+E Y+ M+ + +R YCT +N+K+LI + +S NLP+F + + TN + + A +R S FY ++SW R VQ+ PL+ LC+ N LL + VY+ N+ + T+ K + S+ + E +S + ++ T+ KK+ AQ KL ILLI II+LFL G IP AF+Y+ I F CK+ + CP + +YR VT + L Y L FF+Y FLN H++N Sbjct: 33 VYVQPCICLIGFILNIINSYVFQRKTFCSTPAYMLVLALSIADAITLGLRIPQGLTYYRGSS---SVTQTMAIYAYIYATYAEVPITNMTENMSAWLTVCLALERYVAMRHWNFTRQYCTRQNTKRLIVGIALVSVFFNLPYFMIHRIEFRRFTNGSMRVVTNPTALRR----SQFYTVYSWFRMIAVQIIPLVFLCILNVLLITIVYQHNKKIGKN------TVMKGKDNRLSLCTEGSGAEEASLKETTVGDSRSTQRR--QKKRNAQRKLNILLIAIILLFLFGAIPQAFSYIRIFEAFGTCKEAFHY--CPTYVIYRMVTTNIALISYGLTFFLYFFLNRHFRNEL 365
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3W7Y4 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6427 PE=4 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.850e-38 Identity = 133/346 (38.44%), Postives = 186/346 (53.76%), Query Frame = 3 Query: 375 IYFQFPICIIGSILNFINFLVLTRIGISNA-TYILMSALAFTDASTLLLRTVQ--TYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQN 1403 +Y Q IC +G ILN IN V R S+ Y+L+ AL+ DA TL LR Q TY R + + YI+ YAEVPITN+TEN+S W+T+ LA+E Y+ M+ + +R Y T +N+K+LI + +S NLP+F + + N + I A +R S FY ++SW R VQ+ PL+ LC+ N LL + VY+ N+ F N + + + S L + + A E S + L R KK+ AQ KL ILLI II+LFL G IP AF+Y+ I F CK+ CP + +YR VT + L Y L FF+Y FLN H++N Sbjct: 33 VYVQPCICFVGFILNIINSYVFQRRTFSSTPAYMLVLALSIADAITLGLRIPQGLTYYRGSS---SVTQTMAIYAYIYATYAEVPITNMTENMSAWLTVCLALERYVAMRHWNFTRQYSTRQNTKRLIISIALVSVFFNLPYFMIHRIEFRRFANGSMRVITNTTALRR----SQFYTVYSWFRMTTVQIIPLVFLCILNVLLITIVYQHNKK-FGKNTEMEQKGNRLS--LGAEGSGAEELSLKDTTMGDSWLTQRR---QKKRNAQRKLNILLIAIILLFLFGAIPQAFSYIRIFEAFGTCKEA--FHYCPTYVIYRMVTTNIALISYGLTFFLYFFLNRHFRN 363
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000035759.1 (SMESG000035759.1) HSP 1 Score: 717.613 bits (1851), Expect = 0.000e+0 Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 3 Query: 306 MKNFSNLTLENGTNHEPLIDLLLIYFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN 1478 MKNFSNLT ENGTNHEPLID LLIYFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMFPLLLLCVFNGLLFSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKLTILLIVIIILFLIGQIPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN Sbjct: 1 MKNFSNLTPENGTNHEPLIDFLLIYFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMFPLLLLCVFNGLLFSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKLTILLIVIIILFLIGQIPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN 391
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000035759.1 (SMESG000035759.1) HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 3 Query: 477 MSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN 1478 MSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMFPLLLLCVFNGLLFSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKLTILLIVIIILFLIGQIPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN Sbjct: 1 MSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMFPLLLLCVFNGLLFSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKLTILLIVIIILFLIGQIPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLFRIPKQNCLNFRLFEIKLKN 334
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000068527.1 (SMESG000068527.1) HSP 1 Score: 209.92 bits (533), Expect = 9.415e-61 Identity = 153/368 (41.58%), Postives = 215/368 (58.42%), Query Frame = 3 Query: 324 LTLENGTNHE-PLIDLLLIYFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETN-QRNQSIPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNSFFTLF 1421 +T NGTN P +LL+++ Q PICI+G LN INF V + A Y+L+SAL+ DA TLLL +T +C+ L FC+ P L+ Y+F LY + P++NITE +S IT+ALA E Y+ M+ + ++Y TV+N++ + L++ STL N PFFF T + +E Q +PVVY+ +DS FY HSW R +QM PLL LC+ N LL + + N+ + Y SI S C SP + S+ +KQ AQ KLTILL +II L+LIGQIP A AY+ I+R F +C + + +CP +++YR+VT I+ LA Y+LNFFVY FLNSH++ S F Sbjct: 1 MTAVNGTNDNVPTTELLVVFLQGPICIVGFGLNIINFSVFVKRKYFAAPYVLLSALSLADAVTLLLYFTETMAKCQHLAFCKQPYLQLSAYVFALYVKNPLSNITETISSIITVALATERYLAMRHYNFRKIYFTVKNTRLFVLLISVFSTLFNTPFFFTTTIKISWENETSTKQKVPVVYSNYTSLIDSYFYSTHSWTRAIAIQMLPLLYLCICNSLLLALICHHNKRLDSIRTSY------------SISTDCRSTSHMVCESPMSNQTNQSSIRERKQIAQTKLTILLSIIIFLYLIGQIPSALAYIKIYRKFHSCDNFEVIHECPSYDMYRTVTSIMMLASYALNFFVYFFLNSHFRKSLCDCF 356
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000044466.1 (SMESG000044466.1) HSP 1 Score: 199.134 bits (505), Expect = 1.113e-57 Identity = 146/347 (42.07%), Postives = 213/347 (61.38%), Query Frame = 3 Query: 378 YFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQSIP-VVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVYKRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPS---PKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSNCKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNS 1406 Y Q PIC+IG LN +N +V + ++ Y L+S+LA DA TL+LR Q + E P C P L+ +Y+FV++ E P+TNITE +S W+TL+LA+E ++ MK + S++YCT++N K L + ++ ++NLP+FF +K E N +Q +Y + F S Y +HSW+R IVQ PLLLLCVFN LLF VY NR F + R NSI + + S S PS ++ + + I KK +AQ KLTILLI +I+LFLIGQIPH+FAY+ I++ S K + + ++ ++R+ TM+LTL CYSLNFF+Y+FLN+H+++S Sbjct: 31 YIQIPICLIGFCLNVVNVIVFYKNIHHSSLYFLVSSLALADAVTLILRASQGLLGKECWPLCSSPQLRMYVYMFVIFLEFPVTNITETISNWLTLSLAIERFLAMKHHSFSKVYCTLKNFKILTSFICIIALIINLPYFFTYNVILKKEYNNESQMYEKAIYTNESHFSLSQIYEVHSWIRQVIVQFLPLLLLCVFNFLLFQIVYNHNRKLFVTPRC----------GTNSIIIDSTKESQRLISKPSLSKHPIKEKSTAIEKKLRAQKKLTILLITVILLFLIGQIPHSFAYIKIYKAVS--KYSKFDPEGFEYRMFRTSTMVLTLLCYSLNFFIYLFLNTHFRHS 365
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000051347.1 (SMESG000051347.1) HSP 1 Score: 191.43 bits (485), Expect = 1.352e-54 Identity = 138/352 (39.20%), Postives = 206/352 (58.52%), Query Frame = 3 Query: 363 DLLLIYFQFPICIIGSILNFINFLVLTRIGISNATYILMSALAFTDASTLLLRTVQTYVRCETLPFCEMPNLKYKLYIFVLYAEVPITNITENLSCWITLALAVEHYIQMKFFTKSRLYCTVENSKKLIFLLTFLSTLVNLPFFFLMTTSVKYETNQRNQS-IPVVYAKKRQFMDSIFYPIHSWLRFCIVQMXXXXXXXXXXXXXXSTVY--KRNRNYFNSNRQYFKTLRKWSKDLNSIKAQAIEHSSGQCSSPSPKLETRMSLISKKQKAQYKXXXXXXXXXXXXXXXXXPHAFAYVGIHRFFSN-CKDLTYLKDCPKHELYRSVTMILTLACYSLNFFVYIFLNSHYQNS 1406 + L +Y Q P+C+IG ILN INF + + S A Y+L+ A++ D+ TL+ R + V+C +L FC P L+ +Y+F ++ EVPITNITE++S W +ALA E YI M ++ S+ Y TV N+K + +T LS ++N PFF++ +++E +Q +PV+Y+ S FY H+W R IV++ PLL LCV N LL + V+ K+ F S R + +KD N I +KQ+AQ KLT+LLIV+I+LFLIGQIP +F+Y+ ++ N C YL DCP +++Y SV+ +L + CY NFFVY+ LN+H++NS Sbjct: 12 EFLDVYVQAPLCLIGFILNLINFSIFAQKKFSAAPYVLLMAMSLVDSITLIFRISEAVVKCTSLSFCRNPYLQMVMYLFAVFIEVPITNITESISNWTAVALATERYIAMCYYNLSKQYSTVYNAKLFLLFVTLLSIVLNSPFFYINYVVIEWENTTSHQGMVPVIYSSFSSLALSKFYTFHTWFRPFIVKVIPLLFLCVCNFLLLALVWEHKKKLKQFQSKRSGYLN----TKDNNKIT-------------------------QRKQRAQNKLTMLLIVVIVLFLIGQIPVSFSYLKVYENLPNRCNAYKYLTDCPNYKVYSSVSHLLMITCYCTNFFVYLALNNHFRNS 334 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30022430 ID=SMED30022430|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1779bpback to top protein sequence of SMED30022430-orf-1 >SMED30022430-orf-1 ID=SMED30022430-orf-1|Name=SMED30022430-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=392bp MKNFSNLTLENGTNHEPLIDLLLIYFQFPICIIGSILNFINFLVLTRIGIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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