Cleavage and polyadenylation specificity factor subunit 2

Overview
NameCleavage and polyadenylation specificity factor subunit 2
Smed IDSMED30021904
Length (bp)2545
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Cleavage and polyadenylation specificity factor subunit 2 (SMED30021904) t-SNE clustered cells

Violin plots show distribution of expression levels for Cleavage and polyadenylation specificity factor subunit 2 (SMED30021904) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Cleavage and polyadenylation specificity factor subunit 2 (SMED30021904) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Cleavage and polyadenylation specificity factor subunit 2 (SMED30021904) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30021904

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30021904SMESG000050351.1 SmedASXL_014122SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30021904SMESG000050351.1 SmedASXL_014122SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Match: CPSF2 (cleavage and polyadenylation specific factor 2 [Source:HGNC Symbol;Acc:HGNC:2325])

HSP 1 Score: 360.147 bits (923), Expect = 2.123e-111
Identity = 191/391 (48.85%), Postives = 262/391 (67.01%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            TSII+L   SG  E+   CYLLQVD+F  LLDCGWD +FS + +  + K+   I+AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +K+ Q  NL GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + + RP+LLIT S+  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF R+LF + C D KN IILT R     L+  L  +  +K+       +++++R+K
Sbjct:    2 TSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITE-----IELRKRVK 386

HSP 2 Score: 179.874 bits (455), Expect = 2.082e-46
Identity = 114/366 (31.15%), Postives = 185/366 (50.55%), Query Frame = 3 
Query: 1551 GQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-----KDANGVANIVDELVEANE--------------------------------------IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +    ++             TT+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  EAS  +A  C+     K+  V++P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+     K   GV     EL +  E                                      IPTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R+E G++ LEG + + ++ +R +LY Q+AI+
Sbjct:  451 GSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED--FLVP-----ELQATEEE----KSKLESGLTNGDEPMD---------QDLSDVPTKCIS-------------TTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRA-FGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Match: CPSF2 (cleavage and polyadenylation specific factor 2 [Source:HGNC Symbol;Acc:HGNC:2325])

HSP 1 Score: 133.65 bits (335), Expect = 3.602e-34
Identity = 77/223 (34.53%), Postives = 120/223 (53.81%), Query Frame = 3 
Query: 1890 VKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI--------------------------------KDANGVAN-------IVDELVEANE----IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKR 2426
            +K  + Y ++EG SD  S+ ++I + KP+++IIV G  EAS  +A  C+     K+  V++P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                                 D++ +A          D+  E  E    IPTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R
Sbjct:   48 IKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRA-FGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRR 269
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Match: INTS11 (integrator complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:26052])

HSP 1 Score: 134.035 bits (336), Expect = 5.812e-32
Identity = 101/358 (28.21%), Postives = 161/358 (44.97%), Query Frame = 3 
Query:   99 IRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            IR+       +    C L+ +   + +LDCG    F+D+       Y+ Q  + T  ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D          E + FT   I D    ++ +   QT  +  +   + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RPNLLIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W      +  Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:    4 IRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDE---LEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKA---NHYYKLFIPWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Match: INTS11 (integrator complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:26052])

HSP 1 Score: 133.265 bits (334), Expect = 1.176e-31
Identity = 99/343 (28.86%), Postives = 157/343 (45.77%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    F+D+       Y+ Q  + T  ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D          E + FT   I D    ++ +   QT  +  +   + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RPNLLIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W      +  Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   25 CILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDE---LEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKA---NHYYKLFIPWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Match: INTS11 (integrator complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:26052])

HSP 1 Score: 129.028 bits (323), Expect = 1.891e-30
Identity = 97/332 (29.22%), Postives = 152/332 (45.78%), Query Frame = 3 
Query:  177 LLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            +LDCG    F+D+       Y+ Q  + T  ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D          E + FT   I D    ++ +   QT  +  +   + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RPNLLIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W      +  Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:    1 MLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDE---LEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKA---NHYYKLFIPWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Celegans
Match: cpsf-2 (Probable cleavage and polyadenylation specificity factor subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O17403])

HSP 1 Score: 365.54 bits (937), Expect = 3.502e-113
Identity = 249/729 (34.16%), Postives = 380/729 (52.13%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYG-SFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQ-SFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLF---KHIMDKVKSSEP--FTVQIKERIKQNNSDLYLKITPEIVKSADSV-LRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTK-ELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEAS-NIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKV--GNYELSWLEAVIKDANGVANIV 2237
            TSII+L  FSG  ++ P CYLLQVD  + LLDCGWD  F   Y +++  +   I+AV ISH D  HLG LPYLV KCGLT PVYAT PV KMG + +YD   S     +EF+ +TLDD+D AF+ +  +KY QT  L G   GV      +GHMLGG++W+I +   E IVY VD+NHKKERHLNG  FDN  RP+LLIT ++  S  + +R+ R+E L   IL T+R  G  +I+ DTAGR LEL++LL+ LW N ++ L  Y LV ++ VA +V +FAKS +EWM+E + +      R  PF  ++  +CH+ ++L  V  PKV++ S   +  GF RELF   C D +N +ILT R     L+  L    +   D V   E    ++ +K+R+     +L      +  + A+   LR +  +     N                  ++   +I +     + + +  +     N  H    DI           +F+ TK+   +FP  E K +WDDYGE I  +D    YT              +I       G   +     K ++      N     N+ V      ++  +K +  K  + V C I +  +EG+SD  S  +++A   P++II+V GS++ + +++A F  +      T++  P+ G +++ + E  IYQ  +SDAL++ + F +V  GN  L+W++A + +   + N++
Sbjct:    2 TSIIKLKVFSGAKDEGPLCYLLQVDGDYILLDCGWDERFGLQYFEELKPFIPKISAVLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDV-EEFEHYTLDDVDTAFEKVEQVKYNQTVVLKGDS-GVHFTALPAGHMLGGSIWRICRVTGEDIVYCVDFNHKKERHLNGCSFDNFNRPHLLITGAHHISLPQMRRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSRELFLDWCSDPRNGVILTARPASFTLAAKLVNMAERANDGVLKHEDRLISLVVKKRVALEGEELLEYKRRKAERDAEETRLRMERARRQAQAN---------------ESDDSDDDDIAAPIVPRHSEKDFRSFDGSENDAHTF--DIMAKWDNQQKASFFKTTKKSFPMFPYIEEKVKWDDYGEVIKPED----YT--------------VISKIDLRKGQNKDEPVVVKKREEEEEVYN----PNDHV------EEMPTKCVEFKNRVEVSCRIEFIEYEGISDGESTKKLLAGLLPRQIIVVHGSRDDTRDLVAYFADSGFDT--TMLKAPEAGALVDASVESFIYQVALSDALLADIQFKEVSEGN-SLAWIDARVMEKEAIDNML 680

HSP 2 Score: 78.9518 bits (193), Expect = 8.940e-15
Identity = 36/85 (42.35%), Postives = 59/85 (69.41%), Query Frame = 3 
Query: 2271 LEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVD--NCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            L+P P+ +IP H  +F+N+PKLSD K++L  +G  AEF+ G L+++  NC +I+R++ G   +EG   K Y+ +R++ Y QFA+L
Sbjct:  760 LDPLPKRLIPIHQAVFVNDPKLSDFKNLLTDKGYKAEFLSGTLLINGGNC-SIRRNDTGVFQMEGAFTKDYYKLRRLFYDQFAVL 843
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Celegans
Match: F10B5.8 (pep chromosome:WBcel235:II:8141213:8143478:-1 gene:WBGene00008642.1 transcript:F10B5.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F10B5.8)

HSP 1 Score: 115.546 bits (288), Expect = 2.190e-26
Identity = 87/343 (25.36%), Postives = 153/343 (44.61%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + ++DCG    + D+       Y+    + T  ++ V ISH  + H G+LP++    G   P+Y TYP   +  + L D    K     + +       D    +   +     + +H   + ++I  F +GH+LG  +++I   D  ++Y  DYN   +RHL  A      RP +LI+ S+Y +  +  +R RE +    +   +   G V+I     GRA EL  LLE  W     ++  Y    L   A   N++ +  + W +E + ++F E     F+F++ K     +   D   P+V+  +   L+ G   ++F K C D  N II+
Sbjct:   23 CILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDYLDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLED--YRKVQCDIKGETNFFTSDDIKNCMKKVVGCALHEIIHVDNE-LSIRAFYAGHVLGAAMFEIRLGDHSVLYTGDYNMTPDRHLGAARVLPGVRPTVLISESTYATTIRDSKRARERDFLRKVHECVMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGL---AERANQYYRLFISWTNENIKKTFVERNM--FEFKHIKPME--KGCEDQPGPQVLFSTPGMLHGGQSLKVFKKWCSDPLNMIIM 355
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Celegans
Match: cpsf-3 (Cleavage and Polyadenylation Specificity Factor [Source:UniProtKB/TrEMBL;Acc:Q95PY8])

HSP 1 Score: 101.679 bits (252), Expect = 7.700e-22
Identity = 91/365 (24.93%), Postives = 160/365 (43.84%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKL--INAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSY-LSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C+LL+      +LDCG               + ++  I+ + I+H  + H GALP+L+ K       + T+    +  + L D   +SK    D    +T DD++ +   I  + +++ K ++G    +   P+++GH+LG   + I    + ++Y  D++  ++RHL  A    I  P +LIT S+YG+     R  RE+     +   +   G  LI +   G A EL  +L+  W  +   L    +   + +A       ++ V  M+  + +        PF F++      ++   D + P V++ +   L  GF RELF   C D KN  I+       C+   L KHI+     SEP
Sbjct:   26 CHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIENIDLLLITHFHLDHCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYGGPDRNQLYTEDDLEKSMAKIETIDFREQKEVNG----IRFWPYVAGHVLGACQFMIEIAGVRVLYTGDFSCLEDRHLCAAEIPPIT-PQVLITESTYGTQTHEDRAVREKRFTQMVHDIVTRGGRCLIPAFAIGPAQELMLILDEYW-ESHQELHDIPVYYASSLAKKCMSVYQTFVNGMNSRIQKQI--AVKNPFIFKHVSTLRGMDQFED-AGPCVVLATPGMLQSGFSRELFESWCPDTKNGCIIA----GYCVEGTLAKHIL-----SEP 372
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Fly
Match: Cpsf100 (gene:FBgn0027873 transcript:FBtr0085357)

HSP 1 Score: 518.079 bits (1333), Expect = 1.554e-172
Identity = 303/822 (36.86%), Postives = 461/822 (56.08%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITK-DDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGS-FQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADV-SDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYA-INAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEA-------VIKDANGVANIVDELVEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDN-CVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LH  SG  ++ PPCY+LQ+DD   LLDCGWD  F  N+++++ +    ++AV +SH D +HLGALPYLVGK GL CP+YAT PV KMG + +YD Y+S  + GD       D       +   +KY QT +L  KG G++I P  +GHM+GGT+WKI K  + +IVYA D+NHKKERHL+G   D +QRP+LLIT +Y + +Q+++RR R+E L   IL T+RNNG+VLI  DTAGR LEL+++L+ LW N ES LMAY L  LN V+ NV EFAKS +EWMS+ + ++FE  R+ PF F++ ++CH++ D+  + + PKV++ S   L  GF R+LF +   +  N IILT R     L+ +L    ++     +   + ++ R+    ++L            +  LR+Q  K N L     +  D E E   + E +  +  I  K          +++   P G H            HSG  +F++ KR H++FP  E K + D+YGE IN+ D       G  +  +   NKE + ++     G      AN               + +N V    K    IS+    K + V   +   +FEG SD  SM +++++ +P+ +I++ G+ E + ++A  C+ N+  +   V  P  G++I+ T E HIYQ R+++ LVS L F K  + E++W++         I+    V    D  V+  +  TLE   +  IP HN++ INE KLSD K  LM+  +N+EF GG L   N  +A++R +AGK+ +EG + + Y+ +R++LY Q+AI+
Sbjct:    2 TSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQ-LKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMEL----VENCAPGKQIELDVRRRVDLEGAEL------------EEYLRTQGEKLNPLI----VKPDVEEESSSESEDDIEMSVITGK----------HDIVVRPEGRH------------HSG--FFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKE---EPGIGAEQQANGG-------------IVDNDVQLLEKPTKLISQR---KTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGAR---VFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 756
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Fly
Match: IntS11 (gene:FBgn0039691 transcript:FBtr0085476)

HSP 1 Score: 122.865 bits (307), Expect = 9.746e-29
Identity = 99/345 (28.70%), Postives = 156/345 (45.22%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD-------NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVV--SQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C LL +   + +LDCG    ++D       +Y+      T  I+ V ISH  + H GALPY+    G T P+Y T+P   +  + L D          E + FT   I D    +IP+   Q+  +      + I  + +GH+LG  ++ I      +VY  DYN   +RHL  A  D   RP+LLI+ S+Y +  +  +R RE +    +   +   G VLI     GRA EL  LLE  W         Y  + L   A   N + K  + W ++ + ++F  +    FDF++ K      D A + +P  +VV  +   L+ G   ++F K   +E N +I+
Sbjct:   19 CLLLSMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSHIDCVIISHFHLDHCGALPYMSEIVGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTTQMIKDCMKKVIPVTLHQSMMVD---TDLEIKAYYAGHVLGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKC-RPDLLISESTYATTIRDSKRCRERDFLKKVHECVAKGGKVLIPVFALGRAQELCILLETYWERMNLKYPIYFALGLTEKA---NTYYKMFITWTNQKIRKTF--VHRNMFDFKHIKPF----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Fly
Match: Cpsf73 (gene:FBgn0261065 transcript:FBtr0083690)

HSP 1 Score: 108.612 bits (270), Expect = 5.878e-24
Identity = 94/385 (24.42%), Postives = 171/385 (44.42%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINA-----VFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            + ++++       E    C +L+      +LDCG     S         Y  LI A     +FISH  + H GALP+ + K       + T+    +    L D Y+  ++   E   +T  D++ + + I  + + + +++     GV    +++GH+LG  ++ I    I+I+Y  D++ +++RHL  A    + +P++LIT S+YG+    +R  RE    + +   ++  G  LI     GRA EL  +L+  W +    L    +   + +A       ++ +  M++ + +      + PF FR+      I+   D+  P VI+ S   +  G  RELF   C D KN +I+       C+   L K ++     SEP
Sbjct:   15 SDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSG---MDALPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSD-YIKISNISTEQMLYTEADLEASMEKIETINFHEERDV----MGVRFCAYIAGHVLGAAMFMIEIAGIKILYTGDFSRQEDRHLMAAEVPPM-KPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEFW-SQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDRIRRQIA--VNNPFVFRHISNLKGIDHFEDIG-PCVIMASPGMMQSGLSRELFESWCTDPKNGVIIA----GYCVEGTLAKAVL-----SEP 377
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79])

HSP 1 Score: 520.776 bits (1340), Expect = 4.734e-173
Identity = 321/862 (37.24%), Postives = 477/862 (55.34%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-----KDANGV------------------ANIVDEL---------------------------VEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+L A SG  E+   CYLLQVD+F  LLDCGWD  FS + +  + +Y   ++AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +KY Q  NL GKG G++I P  +GHM+GGT+WKI KD + EI+Y VD+NHK+E HLNG   +++ RP+LLIT S+  S+ + +R+QR+E L   ++ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH++ DLA V  PKV++ SQ  L  GF RELF + C D KN +ILT R     L+  L  +  +K        ++I++R +    +L   +  E +K  ++  + +  K   LD+ D   SD E + E     +    +++ K                             G+    GG +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +     +             TT+ L ++  ++Y ++EG SD  S+ ++I + KP+++IIV G  +AS  +A  CK     K+  V+IP   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+     K   GV                    + +EL                            E++ IPTLEP P   +P H ++FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG     Y+ +R++LY Q+A++
Sbjct:    2 TSIIKLTALSGVQEESALCYLLQVDEFRFLLDCGWDETFSMDIIDSLKRYVHQVDAVLLSHPDHVHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIIYGVDFNHKREIHLNGCSLESLSRPSLLITDSFNASYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLCSQPDLESGFSRELFIQWCQDAKNSVILTYRTTPGTLARYLIDNPGEK-----RIELEIRKRCRLEGRELEEYMEKERMKK-EAAKKLEQAKEVDLDSSD--ESDMEDDLEQPAVVKTKHHDLMMK-----------------------------GEGGRKGG-FFKQAKKSYPMFPTHEERIKWDEYGEIIRPED--FLVP-----ELQATEEE----KSKLESGLTNGEEPME---------QDLSDVPTKCTS-------------TTQTLDIRARVMYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDASQDLAESCKA-YSGKDIKVYIPKLQETVDATSETHIYQVRLKDSLVSSLQFCKARDTELAWIDGVLDMRVEKVDTGVIVELGEAKDEAEEGGEQGMEVTEELNTEPSTAAAANQRAMKTLFGEDEKEISEESDVIPTLEPLPAHEVPGHQSVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRICLEGCHCDDYYRIRELLYEQYAVV 790
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79])

HSP 1 Score: 520.776 bits (1340), Expect = 4.734e-173
Identity = 321/862 (37.24%), Postives = 477/862 (55.34%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-----KDANGV------------------ANIVDEL---------------------------VEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+L A SG  E+   CYLLQVD+F  LLDCGWD  FS + +  + +Y   ++AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +KY Q  NL GKG G++I P  +GHM+GGT+WKI KD + EI+Y VD+NHK+E HLNG   +++ RP+LLIT S+  S+ + +R+QR+E L   ++ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH++ DLA V  PKV++ SQ  L  GF RELF + C D KN +ILT R     L+  L  +  +K        ++I++R +    +L   +  E +K  ++  + +  K   LD+ D   SD E + E     +    +++ K                             G+    GG +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +     +             TT+ L ++  ++Y ++EG SD  S+ ++I + KP+++IIV G  +AS  +A  CK     K+  V+IP   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+     K   GV                    + +EL                            E++ IPTLEP P   +P H ++FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG     Y+ +R++LY Q+A++
Sbjct:    2 TSIIKLTALSGVQEESALCYLLQVDEFRFLLDCGWDETFSMDIIDSLKRYVHQVDAVLLSHPDHVHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIIYGVDFNHKREIHLNGCSLESLSRPSLLITDSFNASYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLCSQPDLESGFSRELFIQWCQDAKNSVILTYRTTPGTLARYLIDNPGEK-----RIELEIRKRCRLEGRELEEYMEKERMKK-EAAKKLEQAKEVDLDSSD--ESDMEDDLEQPAVVKTKHHDLMMK-----------------------------GEGGRKGG-FFKQAKKSYPMFPTHEERIKWDEYGEIIRPED--FLVP-----ELQATEEE----KSKLESGLTNGEEPME---------QDLSDVPTKCTS-------------TTQTLDIRARVMYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDASQDLAESCKA-YSGKDIKVYIPKLQETVDATSETHIYQVRLKDSLVSSLQFCKARDTELAWIDGVLDMRVEKVDTGVIVELGEAKDEAEEGGEQGMEVTEELNTEPSTAAAANQRAMKTLFGEDEKEISEESDVIPTLEPLPAHEVPGHQSVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRICLEGCHCDDYYRIRELLYEQYAVV 790
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79])

HSP 1 Score: 309.301 bits (791), Expect = 8.828e-95
Identity = 205/640 (32.03%), Postives = 322/640 (50.31%), Query Frame = 3 
Query:  750 ILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-----KDANGV------------------ANIVDEL---------------------------VEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            ++ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH++ DLA V  PKV++ SQ  L  GF RELF + C D KN +ILT R     L+  L  +  +K        ++I++R +    +L   +  E +K  ++  + +  K   LD+ D   SD E + E     +    +++ K                             G+    GG +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +     +             TT+ L ++  ++Y ++EG SD  S+ ++I + KP+++IIV G  +AS  +A  CK     K+  V+IP   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+     K   GV                    + +EL                            E++ IPTLEP P   +P H ++FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG     Y+ +R++LY Q+A++
Sbjct:    3 VMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVPSPKVVLCSQPDLESGFSRELFIQWCQDAKNSVILTYRTTPGTLARYLIDNPGEKR-----IELEIRKRCRLEGRELEEYMEKERMKK-EAAKKLEQAKEVDLDSSD--ESDMEDDLEQPAVVKTKHHDLMMK-----------------------------GEGGRKGG-FFKQAKKSYPMFPTHEERIKWDEYGEIIRPED--FLVP-----ELQATEEE----KSKLESGLTNGEEPME---------QDLSDVPTKCTS-------------TTQTLDIRARVMYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDASQDLAESCKA-YSGKDIKVYIPKLQETVDATSETHIYQVRLKDSLVSSLQFCKARDTELAWIDGVLDMRVEKVDTGVIVELGEAKDEAEEGGEQGMEVTEELNTEPSTAAAANQRAMKTLFGEDEKEISEESDVIPTLEPLPAHEVPGHQSVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRICLEGCHCDDYYRIRELLYEQYAVV 570
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Match: ints11 (integrator complex subunit 11 [Source:NCBI gene;Acc:553648])

HSP 1 Score: 132.109 bits (331), Expect = 1.034e-31
Identity = 97/343 (28.28%), Postives = 158/343 (46.06%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    F+D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D          E + FT   I D    ++P+   QT  +  +   + I  + +GH+LG  + +I      +VY  DYN   +RHL  A  D   RP++LI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   19 CILVSIGGKNIMLDCGMHMGFNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDE---LEIKAYYAGHVLGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDILISESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Match: ints11 (integrator complex subunit 11 [Source:NCBI gene;Acc:553648])

HSP 1 Score: 131.724 bits (330), Expect = 1.713e-31
Identity = 97/343 (28.28%), Postives = 158/343 (46.06%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    F+D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D          E + FT   I D    ++P+   QT  +  +   + I  + +GH+LG  + +I      +VY  DYN   +RHL  A  D   RP++LI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   19 CILVSIGGKNIMLDCGMHMGFNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDE---LEIKAYYAGHVLGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDILISESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Match: zbtb14 (zinc finger and BTB domain containing 14 [Source:Xenbase;Acc:XB-GENE-968315])

HSP 1 Score: 362.073 bits (928), Expect = 3.931e-112
Identity = 189/391 (48.34%), Postives = 260/391 (66.50%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            TSII+L   +G  E+   CYLLQVD+F  LLDCGWD NFS + +  + KY   ++AV +SH D  HLGALPY VGK GL C +Y+T PV KMG + +YD Y S+ ++ ++F  F+LDD+D AFD I  +KY Q  +L GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + I RP+LLIT  +  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH   DLA V  PKV++ SQ  L  GF RELF + C D KN +ILT R     L+  L  H  +++       +++++R+K
Sbjct:    2 TSIIKLTTLAGAQEESAVCYLLQVDEFRFLLDCGWDENFSMDIIDSVKKYVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCAIYSTIPVYKMGQMFMYDLYQSRHNT-EDFSLFSLDDVDCAFDKIQQLKYSQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMISRPSLLITDCFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLTLCHGFSDLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRTTPGTLARFLIDHPSERI-----IDIELRKRVK 386

HSP 2 Score: 178.333 bits (451), Expect = 6.569e-46
Identity = 112/367 (30.52%), Postives = 186/367 (50.68%), Query Frame = 3 
Query: 1551 GQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIK---------------------------------DANGVA----------NIVDELVEANEI-PTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A   E         SG TN               Q+L+ +    +++             T+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  +A+  +A  C+     K+  V+ P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                                  DA+ +A          +   E  E +EI PTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R+E G++ LEG + + +F +R++LY Q+AI+
Sbjct:  451 GSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED--FLVP-----ELQATEDE----KTKLESGLTNGEEPMD---------QDLSDVPTKCISA-------------TESMEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDATQDLAEACRA-FGGKDIKVYTPKLHETVDATSETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGVLDMRVSKVDTGVILEEGELKDEGEDSEMQVDTQALDASTIAQQKAIKSLFGDDDKEFSEESEIIPTLEPLPSNEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNMVAVRRTETGRIGLEGCLCEDFFKIRELLYEQYAIV 783
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Match: ENSXETT00000019694.1 (integrator complex subunit 11 [Source:NCBI gene;Acc:100379959])

HSP 1 Score: 127.872 bits (320), Expect = 4.127e-30
Identity = 96/347 (27.67%), Postives = 157/347 (45.24%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYD-SYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ---GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D   ++    G+     +    D        MK     NLH   Q    + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RP+LLI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   ++KN +I+
Sbjct:   19 CILVSIGGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKDC-------MKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDLLISESTYATTIRDSKRCRERDFLKKVHETVEKGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNDKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Match: ENSXETT00000019703.1 (integrator complex subunit 11 [Source:NCBI gene;Acc:100379959])

HSP 1 Score: 127.872 bits (320), Expect = 4.941e-30
Identity = 96/347 (27.67%), Postives = 157/347 (45.24%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYD-SYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ---GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D   ++    G+     +    D        MK     NLH   Q    + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RP+LLI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   ++KN +I+
Sbjct:   19 CILVSIGGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKDC-------MKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDLLISESTYATTIRDSKRCRERDFLKKVHETVEKGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNDKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Match: ENSXETT00000033703.1 (integrator complex subunit 11 [Source:NCBI gene;Acc:100379959])

HSP 1 Score: 127.487 bits (319), Expect = 8.028e-30
Identity = 96/347 (27.67%), Postives = 157/347 (45.24%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYD-SYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ---GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D   ++    G+     +    D        MK     NLH   Q    + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RP+LLI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   ++KN +I+
Sbjct:   39 CILVSIGGKNVMLDCGMHMGYNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKDC-------MKKVVAVNLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDLLISESTYATTIRDSKRCRERDFLKKVHETVEKGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNDKNMVIM 370
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Match: cpsf3 (cleavage and polyadenylation specific factor 3 [Source:NCBI gene;Acc:448456])

HSP 1 Score: 111.694 bits (278), Expect = 3.677e-25
Identity = 90/365 (24.66%), Postives = 166/365 (45.48%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++++ D I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   N++   L+I S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ V  M++ + +      + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   11 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRALIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQIN--INNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 355
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Match: Cpsf2 (cleavage and polyadenylation specific factor 2 [Source:MGI Symbol;Acc:MGI:1861601])

HSP 1 Score: 513.457 bits (1321), Expect = 3.161e-170
Identity = 320/855 (37.43%), Postives = 471/855 (55.09%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-------------------KDANGVANIVD-----------------------ELVEANE-IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+L   SG  E+   CYLLQVD+F  LLDCGWD +FS + +  + K+   I+AV +SH D  HLGALP+ VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +K+ Q  NL GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + + RP+LLIT S+  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF R+LF + C D KN IILT R     L+  L  +  +KV       +++++R+K    +L   +  E +K   +    QS K   +D+ D   SD E +                                +P+  H    D+         G +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +    V++             T+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  EAS  +A  C+     K+  V++P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                    D       VD                       EL E  E IPTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R+E G++ LEG + + ++ +R +LY Q+AI+
Sbjct:    2 TSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTE-----IELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQS-KEADIDSSD--ESDVEEDV------------------------------DQPSA-HKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED--FLVP-----ELQATEEE----KSKLESGLTNGEEPMD---------QDLSDVPTKCVSA-------------TESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRA-FGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEETEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Match: Ints11 (integrator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1919207])

HSP 1 Score: 133.265 bits (334), Expect = 6.261e-32
Identity = 100/358 (27.93%), Postives = 161/358 (44.97%), Query Frame = 3 
Query:   99 IRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            IR+       +    C L+ +   + +LDCG    ++D+       Y+ Q  + T  ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D          E + FT   I D    ++ +   QT  +  +   + I  + +GH+LG  +++I      +VY  DYN   +RHL  A  D   RPNLLIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W      +  Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:    4 IRVTPLGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDE---LEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Match: Ints11 (integrator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1919207])

HSP 1 Score: 113.62 bits (283), Expect = 1.197e-25
Identity = 93/369 (25.20%), Postives = 150/369 (40.65%), Query Frame = 3 
Query:   99 IRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-----------IVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            IR+       +    C L+ +   + +LDCG    ++D+       Y+ Q  + T  ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D                               Y++   +  KG+      F +  M+   + K+    +            +VY  DYN   +RHL  A  D   RPNLLIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W      +  Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:    4 IRVTPLGAGQDVGRSCILVSISGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLED-------------------------------YRKIA-VDKKGEA----NFFTSQMIKDCMKKVVAVHLHQTVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 328
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Match: Cpsf3 (cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328])

HSP 1 Score: 110.538 bits (275), Expect = 8.588e-25
Identity = 91/365 (24.93%), Postives = 166/365 (45.48%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++++ D I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   NI+   L+I S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ V  M++ + +      + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   27 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQIN--INNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 371
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Match: Cpsf3 (cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328])

HSP 1 Score: 110.538 bits (275), Expect = 2.176e-24
Identity = 91/365 (24.93%), Postives = 166/365 (45.48%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++++ D I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   NI+   L+I S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ V  M++ + +      + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   27 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQIN--INNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 371
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q9V3D6|CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster OX=7227 GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 518.079 bits (1333), Expect = 1.558e-171
Identity = 303/822 (36.86%), Postives = 461/822 (56.08%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITK-DDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGS-FQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADV-SDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYA-INAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEA-------VIKDANGVANIVDELVEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDN-CVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LH  SG  ++ PPCY+LQ+DD   LLDCGWD  F  N+++++ +    ++AV +SH D +HLGALPYLVGK GL CP+YAT PV KMG + +YD Y+S  + GD       D       +   +KY QT +L  KG G++I P  +GHM+GGT+WKI K  + +IVYA D+NHKKERHL+G   D +QRP+LLIT +Y + +Q+++RR R+E L   IL T+RNNG+VLI  DTAGR LEL+++L+ LW N ES LMAY L  LN V+ NV EFAKS +EWMS+ + ++FE  R+ PF F++ ++CH++ D+  + + PKV++ S   L  GF R+LF +   +  N IILT R     L+ +L    ++     +   + ++ R+    ++L            +  LR+Q  K N L     +  D E E   + E +  +  I  K          +++   P G H            HSG  +F++ KR H++FP  E K + D+YGE IN+ D       G  +  +   NKE + ++     G      AN               + +N V    K    IS+    K + V   +   +FEG SD  SM +++++ +P+ +I++ G+ E + ++A  C+ N+  +   V  P  G++I+ T E HIYQ R+++ LVS L F K  + E++W++         I+    V    D  V+  +  TLE   +  IP HN++ INE KLSD K  LM+  +N+EF GG L   N  +A++R +AGK+ +EG + + Y+ +R++LY Q+AI+
Sbjct:    2 TSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQ-LKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMEL----VENCAPGKQIELDVRRRVDLEGAEL------------EEYLRTQGEKLNPLI----VKPDVEEESSSESEDDIEMSVITGK----------HDIVVRPEGRH------------HSG--FFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKE---EPGIGAEQQANGG-------------IVDNDVQLLEKPTKLISQR---KTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGAR---VFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV 756
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Match: sp|O35218|CPSF2_MOUSE (Cleavage and polyadenylation specificity factor subunit 2 OS=Mus musculus OX=10090 GN=Cpsf2 PE=1 SV=1)

HSP 1 Score: 513.457 bits (1321), Expect = 2.211e-169
Identity = 320/855 (37.43%), Postives = 471/855 (55.09%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI-------------------KDANGVANIVD-----------------------ELVEANE-IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+L   SG  E+   CYLLQVD+F  LLDCGWD +FS + +  + K+   I+AV +SH D  HLGALP+ VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +K+ Q  NL GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + + RP+LLIT S+  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF R+LF + C D KN IILT R     L+  L  +  +KV       +++++R+K    +L   +  E +K   +    QS K   +D+ D   SD E +                                +P+  H    D+         G +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +    V++             T+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  EAS  +A  C+     K+  V++P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                    D       VD                       EL E  E IPTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R+E G++ LEG + + ++ +R +LY Q+AI+
Sbjct:    2 TSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTE-----IELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQS-KEADIDSSD--ESDVEEDV------------------------------DQPSA-HKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED--FLVP-----ELQATEEE----KSKLESGLTNGEEPMD---------QDLSDVPTKCVSA-------------TESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRA-FGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEETEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q9W799|CPSF2_XENLA (Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis OX=8355 GN=cpsf2 PE=1 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 2.966e-112
Identity = 192/397 (48.36%), Postives = 262/397 (65.99%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL 1274
            TSII+L    G  E+   CYLLQVD+F  LLDCGWD NFS + +  + KY   ++AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  F+LDD+D AFD I  +KY Q  +L GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + I RP+LLIT S+  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH   DLA V  PKV++ SQ  L  GF RELF + C D KN +ILT R     L+  L  H  +++       +++++R+K    +L
Sbjct:    2 TSIIKLTTLVGAQEESAVCYLLQVDEFRFLLDCGWDENFSMDIIDSVKKYVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNT-EDFSLFSLDDVDCAFDKIQQLKYNQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMINRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLTLCHGYSDLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRTTPGTLARFLIDHPSERI-----IDIELRKRVKLEGKEL 392

HSP 2 Score: 181.03 bits (458), Expect = 4.784e-46
Identity = 111/367 (30.25%), Postives = 184/367 (50.14%), Query Frame = 3 
Query: 1551 GQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAV---------------------------------IKDANGVAN--IVDELV---------EANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G +F+  K+ + +FP+ E + +WD+YGE I    P     P      +   K          SG TN               Q+L+ +    V+             TT+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  +A+  +A  C+     K+  V+ P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V                                 + DA+ +A   ++  L          E+  IPTLEP P   +P H ++F+NEP+LSD K +L++EG++AEF+GG LV +N VA++R+E G++ LEG + + +F +R++LY Q+AI+
Sbjct:  451 GSFFKQAKKSYPMFPAPEDRIKWDEYGEIIK---PEDFLVPELQVTEDEKTK--------LESGLTNGDEPMD---------QDLSDVPTKCVS-------------TTESMEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPDATQDLAEACRA-FGGKDIKVYTPKLHETVDATSETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGVLDMRVSKVDTGVILEERELKDEGEDMEMQVDTQVMDASTIAQQKVIKSLFGDDDKEFSEESEIIPTLEPLPSNEVPGHQSVFMNEPRLSDFKQVLLREGIHAEFVGGVLVCNNMVAVRRTETGRIGLEGCLCEDFFKIRELLYEQYAIV 783
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Match: sp|O17403|CPSF2_CAEEL (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Caenorhabditis elegans OX=6239 GN=cpsf-2 PE=3 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 4.455e-112
Identity = 249/729 (34.16%), Postives = 380/729 (52.13%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYG-SFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQ-SFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLF---KHIMDKVKSSEP--FTVQIKERIKQNNSDLYLKITPEIVKSADSV-LRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTK-ELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEAS-NIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKV--GNYELSWLEAVIKDANGVANIV 2237
            TSII+L  FSG  ++ P CYLLQVD  + LLDCGWD  F   Y +++  +   I+AV ISH D  HLG LPYLV KCGLT PVYAT PV KMG + +YD   S     +EF+ +TLDD+D AF+ +  +KY QT  L G   GV      +GHMLGG++W+I +   E IVY VD+NHKKERHLNG  FDN  RP+LLIT ++  S  + +R+ R+E L   IL T+R  G  +I+ DTAGR LEL++LL+ LW N ++ L  Y LV ++ VA +V +FAKS +EWM+E + +      R  PF  ++  +CH+ ++L  V  PKV++ S   +  GF RELF   C D +N +ILT R     L+  L    +   D V   E    ++ +K+R+     +L      +  + A+   LR +  +     N                  ++   +I +     + + +  +     N  H    DI           +F+ TK+   +FP  E K +WDDYGE I  +D    YT              +I       G   +     K ++      N     N+ V      ++  +K +  K  + V C I +  +EG+SD  S  +++A   P++II+V GS++ + +++A F  +      T++  P+ G +++ + E  IYQ  +SDAL++ + F +V  GN  L+W++A + +   + N++
Sbjct:    2 TSIIKLKVFSGAKDEGPLCYLLQVDGDYILLDCGWDERFGLQYFEELKPFIPKISAVLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDV-EEFEHYTLDDVDTAFEKVEQVKYNQTVVLKGDS-GVHFTALPAGHMLGGSIWRICRVTGEDIVYCVDFNHKKERHLNGCSFDNFNRPHLLITGAHHISLPQMRRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSRELFLDWCSDPRNGVILTARPASFTLAAKLVNMAERANDGVLKHEDRLISLVVKKRVALEGEELLEYKRRKAERDAEETRLRMERARRQAQAN---------------ESDDSDDDDIAAPIVPRHSEKDFRSFDGSENDAHTF--DIMAKWDNQQKASFFKTTKKSFPMFPYIEEKVKWDDYGEVIKPED----YT--------------VISKIDLRKGQNKDEPVVVKKREEEEEVYN----PNDHV------EEMPTKCVEFKNRVEVSCRIEFIEYEGISDGESTKKLLAGLLPRQIIVVHGSRDDTRDLVAYFADSGFDT--TMLKAPEAGALVDASVESFIYQVALSDALLADIQFKEVSEGN-SLAWIDARVMEKEAIDNML 680

HSP 2 Score: 78.9518 bits (193), Expect = 1.137e-13
Identity = 36/85 (42.35%), Postives = 59/85 (69.41%), Query Frame = 3 
Query: 2271 LEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVD--NCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            L+P P+ +IP H  +F+N+PKLSD K++L  +G  AEF+ G L+++  NC +I+R++ G   +EG   K Y+ +R++ Y QFA+L
Sbjct:  760 LDPLPKRLIPIHQAVFVNDPKLSDFKNLLTDKGYKAEFLSGTLLINGGNC-SIRRNDTGVFQMEGAFTKDYYKLRRLFYDQFAVL 843
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Match: sp|Q10568|CPSF2_BOVIN (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 7.066e-111
Identity = 192/391 (49.10%), Postives = 262/391 (67.01%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            TSII+L   SG  E+   CYLLQVD+F  LLDCGWD +FS + +  + K+   I+AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +K+ Q  NL GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   + + RP+LLIT S+  ++ + +R+QR+E L   +L TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF R+LF + C D KN IILT R     L+  L  +  +KV       +++++R+K
Sbjct:    2 TSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNT-EDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTE-----IELRKRVK 386

HSP 2 Score: 181.03 bits (458), Expect = 4.660e-46
Identity = 113/366 (30.87%), Postives = 188/366 (51.37%), Query Frame = 3 
Query: 1551 GQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIK----------------------------DANGVANIV-----------DELVEANE----IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G +F+  K+ + +FP+ E + +WD+YGE I  +D  FL        + A  +E     +   SG TN               Q+L+ +    ++             TT+ + +K  + Y ++EG SD  S+ ++I + KP+++IIV G  EAS  +A  C+     K+  V++P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                             DA   ++++           D+  E  E    IPTLEP P   +P H ++F+NEP+LSD K +L++EG+ AEF+GG LV +N VA++R+E G++ LEG + + ++ +R +LY Q+AI+
Sbjct:  451 GSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPED--FLVP-----ELQATEEE----KSKLESGLTNGDEPMD---------QDLSDVPTKCIS-------------TTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRA-FGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV 782
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Match: A0A131YJH7 (Cleavage and polyadenylation specificity factor subunit 2 OS=Rhipicephalus appendiculatus OX=34631 PE=3 SV=1)

HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0
Identity = 327/820 (39.88%), Postives = 483/820 (58.90%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL--YLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVA--NIVDELVEANE----IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LHA SG  ++ P CYLLQVD+F  LLDCGWD  FS   V+++ K+   ++AV +S  D  HLGALPYLVG+C L CP+YAT PV KMG + +YD + S+ +  ++F  FTLDD+D AFD II +KY QT NL GKGQG++I P  +GHM+GGT+W+I KD  E IVYAVD+NHKKERHLNG   + I RP+LLIT  Y  ++ +++RR R+E L   IL TLRN+G+VL+  DTAGR LEL+++LE LW N +S LMAY L  LN V+ NV EFAKS VEWMS+ VM+SFE  R+ PF FR+ ++CH + +LA V +PKV++ S + +  GF RELF + C   +N ++LT R+    L+  L ++        +  T+ +K+R++   S+L  Y++   E+  +     R ++ ++  L   D   S EE E+++ ++ +  LP                    EP            G+       +F+  K+ +L+FP +E K +WDDYGE I  +D                    ++ D       T+     A+   L+   Q++  +    + S             + +L V  S+ + +FEG SD  S+ +++   KPQ +I+V GS EA+  MA FC+++  + +  V  P  G+V++ T E HIYQ ++ D+LVSSL F +  N EL+WL+  I     +A     DE ++ +E    +  L+P P   +P H TIF+NE KLSD K +L++ G+ AEF GG L  +  VA++R+EAG++ +EG + + YF VR++LY Q+AI+
Sbjct:    2 TSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLQAVKEMKKHASQVDAVLLSFPDCGHLGALPYLVGQCELKCPIYATVPVYKMGQMFMYDLFQSRHNM-EDFTLFTLDDVDAAFDKIIQLKYSQTVNLKGKGQGLSITPLPAGHMIGGTVWRIVKDGEEDIVYAVDFNHKKERHLNGCALETISRPSLLITDCYNANYVQARRRTRDEQLMTNILQTLRNSGNVLVAVDTAGRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARNNPFQFRHLQLCHGMAELARVPEPKVVLASMADMECGFSRELFIQWCSSPRNSVVLTSRSAPGTLARQLIEN-----PHQQSLTITVKKRVRLEGSELEEYMRKEKELAAA-----RHKAERDTEL---DASDSSEESEDDMDIDEKKPLP--------------------EPK-----------GEAKSKSMGFFKQAKKSYLMFPVKEEKVKWDDYGEIIRPED-------------------FVVVDKTAQEEETDE--TKAEDDDLM---QDVTEVPTKCLES-------------SLQLDVNASLQFIDFEGRSDGESVRKIVQMMKPQRVILVRGSPEATQAMATFCRSSGSV-QGRVFTPRIGEVVDATTESHIYQVKLRDSLVSSLQFARAKNAELAWLDGEIATEEHLAPDGTRDETIDEDESRESMYILQPLPPSQVPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCLCEDYFKVREILYQQYAII 738
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Match: A0A224YVF7 (Cleavage and polyadenylation specificity factor subunit 2 OS=Rhipicephalus zambeziensis OX=60191 PE=3 SV=1)

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 325/820 (39.63%), Postives = 477/820 (58.17%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL--YLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVA--NIVDELVEANE----IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LHA SG  ++ P CYLLQVD+F  LLDCGWD  FS   V+++ K+   ++AV +S  D  HLGALPYLVG+C L CP+YAT PV KMG + +YD + S+ +  ++F  FTLDD+D AFD II +KY QT NL GKGQG++I P  +GHM+GGT+W+I KD  E IVYAVD+NHKKERHLNG   + I RP+LLIT  Y  ++ +++RR R+E L   IL TLRN+G+VL+  DTAGR LEL+++LE LW N +S LMAY L  LN V+ NV EFAKS VEWMS+ VM+SFE  R+ PF FR+ ++CH + +LA V +PKV++ S + +  GF RELF + C   +N ++LT R+    L+  L ++        +  T+ +K+R++   S+L  Y++   E+  +     R ++ ++  LD  D     E+              +I  K               EP            G+       +F+  K+ +L+FP +E K +WDDYGE I  +D                    ++ D       T+     A+   L+   Q++  +    + S             + +L V  S+ + +FEG SD  S+ +++   KPQ +I+V GS EA+  MA FC+++  + +  V  P  G+V++ T E HIYQ ++ D+LVSSL F +  N EL+WL+  I     +A     DE ++ +E    +  L+P P   +P H TIF+NE KLSD K +L++ G+ AEF GG L  +  VA++R+EAG++ +EG + + YF VR++LY Q+AI+
Sbjct:    2 TSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLQAVKEMKKHASQVDAVLLSFPDCGHLGALPYLVGQCELKCPIYATVPVYKMGQMFMYDLFQSRHNM-EDFTLFTLDDVDAAFDKIIQLKYSQTVNLKGKGQGLSITPLPAGHMIGGTVWRIVKDGEEDIVYAVDFNHKKERHLNGCALETISRPSLLITDCYNANYVQARRRTRDEQLMTNILQTLRNSGNVLVAVDTAGRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARNNPFQFRHLQLCHGLAELARVPEPKVVLASMADMECGFSRELFIQWCSSPRNSVVLTSRSAPGTLARQLIEN-----PHQQSLTITVKKRVRLEGSELEEYMRKEKELAAA-----RQKAERDTELDASDSSEESEDDM------------DIDEKKP-----------QPEPK-----------GEAKSKSMGFFKQAKKSYLMFPVKEEKVKWDDYGEIIRPED-------------------FVVVDKTAQEEETDE--TKAEDDDLM---QDVTEVPTKCLES-------------SLQLDVNASLQFIDFEGRSDGESVRKIVQMMKPQRVILVRGSPEATQAMAAFCRSSGSV-QGRVFTPRIGEVVDATTESHIYQVKLRDSLVSSLQFARAKNAELAWLDGEIATEEHLAPDGTRDETIDEDESRESMYILQPLPPSQVPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCLCEDYFKVREILYQQYAII 738
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Match: A0A4D5RBS3 (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) OS=Ixodes scapularis OX=6945 PE=3 SV=1)

HSP 1 Score: 549.28 bits (1414), Expect = 0.000e+0
Identity = 329/826 (39.83%), Postives = 477/826 (57.75%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL--YLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVI------------KDANGVANIVDELVEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LHA SG  ++ P CYLLQVD+F  LLDCGWD  FS   ++++ K+   ++AV +S  D  HLGALPYLVG+C L CP+YAT PV KMG + +YD + S+ +  ++F  FTLDD+D AFD II +KY QT  L GKGQG++I P  +GHM+GGT+W+I KD  E IVYAVD+NHKKERHLNG + + + RP+LLIT +Y  ++ +++RR R+E L   IL TLRN G+VL+  DTAGR LEL+++LE LW N +S LMAY L  LN V+ NV EFAKS VEWMS+ VM+SFE  R+ PF FR+ ++CH + +LA V +PKV++ S + +  GF RELF + C   KN ++LT R     L+  L ++        +  T+++K+R++   S+L  Y++   E+  +     R ++ ++  L   D   S EE E+++ ++ +  LP                    EP            G+       +F+  K+ +L+FP +E K +WDDYGE I  +D  F+                           T    A+          Q++A +    + S             T  L V  S+ Y +FEG SD  S+ ++I+  KPQ +I+V GS +A+  +A FC+T+  + +  V  P  G+V++ T E HIYQ ++ D+LVSSL F K  N EL+WL+  I            +DA  V    D +        L+P P   IP H TIF+NE KLSD K +L++ G+ AEF GG L  +  VA++R+EAG++ +EG + + YF VR++LY Q+AI+
Sbjct:    2 TSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLQAIKEMKKHASQVDAVLLSFPDCGHLGALPYLVGQCDLKCPIYATVPVYKMGQMFMYDLFQSRHNM-EDFTLFTLDDVDAAFDKIIQLKYSQTVALKGKGQGLSITPLAAGHMIGGTIWRIVKDGEEDIVYAVDFNHKKERHLNGCVMETLTRPSLLITDAYNANYVQARRRTRDEQLMTNILQTLRNGGNVLVSVDTAGRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARNNPFQFRHLQLCHGLAELARVPEPKVVLASMADMECGFSRELFVQWCRSPKNSVVLTSRTAPGTLARQLVEN-----PHQQTLTIKVKKRVRLEGSELEEYMRREKELAAA-----RHKAERDTEL---DASDSSEESEDDMDVDEKKPLP--------------------EPK-----------GEAKSKSLGFFKQAKKSYLMFPVKEEKIKWDDYGEIIRPED--FVMV----------------------DKTTQEEEADDTKADDDDLAQDVAEVPTKCLES-------------TLSLDVNASLQYIDFEGRSDGESVRKIISMMKPQRVILVRGSPDATQALAAFCRTSGAV-QGRVFTPRPGEVVDATTESHIYQVKLRDSLVSSLQFSKAKNAELAWLDGEIIAEEHLAPDGSREDAPDVEESRDSMY------ILQPLPPSQIPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCLCEDYFKVREILYKQYAII 738
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Match: A0A1E1XLS1 (Cleavage and polyadenylation specificity factor subunit 2 OS=Amblyomma sculptum OX=1581419 PE=2 SV=1)

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 327/820 (39.88%), Postives = 479/820 (58.41%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL--YLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVA------NIVDELVEANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+LHA SG  ++ P CYLLQVD+F  LLDCGWD  FS + ++++ K+   ++AV +S  D  HLGALPYLVG+C L CP+YAT PV KMG + +YD + S+ +  ++F  FTLDD+D AFD II +KY QT NL GKGQG++I P  +GHM+GGT+W+I KD  E IVYAVD+NHKKERHLNG   + I RP+LLIT  Y  ++ +++RR R+E L   IL TLRN G+VL+  DTAGR LEL+++LE LW N +S LMAY L  LN V+ NV EFAKS VEWMS+ VM+SFE  R+ PF FR+ ++CH + +LA V +PKV++ S S +  GF RELF + C   +N ++LT R+    L+  L ++        +  T+ +K+R++   S+L  Y++   E+  +     R ++ ++  LD      S EE E+++ ++ +  LP                    EP G             A S G +F+  K+ +L+FP +E K +WDDYGE I  +D  F+                       +       +   K++   L      + T  L  S               +L V  S+ + +FEG SD  S+ +++   KPQ +I+V GS EA+  MA FC+++  + +  V  P   ++++ T E HIYQ ++ D+LVSSL F +  N EL+WL+  I     +A      +I+D     + +  L+P P   +P H TIF+NE KLSD K +L++ G+ AEF GG L  +  VA++R+EAG++ +EG + + YF VR++LY Q+AI+
Sbjct:    2 TSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLHAIKEMKKHASQVDAVLLSFPDCGHLGALPYLVGQCDLKCPIYATVPVYKMGQMFMYDLFQSRHNM-EDFTLFTLDDVDAAFDKIIQLKYSQTVNLKGKGQGLSITPLPAGHMIGGTVWRIVKDGEEDIVYAVDFNHKKERHLNGCALETITRPSLLITDCYNANYVQARRRTRDEQLMTNILQTLRNGGNVLVAVDTAGRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARNNPFQFRHLQLCHGLAELARVPEPKVVLASMSDMECGFSRELFIQWCSSPRNSVVLTSRSAPGTLARQLIEN-----PHQQSLTITVKKRVRLEGSELEEYMRKEKELAAA-----RHKAERDTELDVS---DSSEESEDDMDVDEKKPLP--------------------EPKG----------ESKAKSMG-FFKQAKKSYLMFPVKEEKIKWDDYGEIIRPED--FVVV---------------------DKAAQEEEADETKAEDDDLTQDVTEVPTKCLETSL--------------QLDVNASLQFIDFEGRSDGESVRKIVQMMKPQRVILVRGSPEATQAMAAFCRSSGAV-QGRVFTPRMNELVDATTESHIYQVKLRDSLVSSLQFSRAKNAELAWLDGEIATEEHLAPDGMQEDILDVDEPRDSMYILQPLPPSQVPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCLCEDYFKVREILYQQYAII 738
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Match: R7V1Z3 (Cleavage and polyadenylation specificity factor subunit 2 OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_155355 PE=3 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 1.813e-180
Identity = 308/815 (37.79%), Postives = 468/815 (57.42%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGS-FQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQI-SKSITTKE-LSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVANIVD-ELVEANE-IPTLEPPEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            TSII+L  FSG + + PPCY+LQVD+FH LLDCGWD  F   +++ + K+   I+AV +S+ D  HLGALPYLVGKCG+TCP+Y+T PV KMG + +YD Y S  +S +       D       +   +KY QT NL GKG G+ I P  +GHM+GGT+WKI KD + EI+YAVDYNHK+ERHLNG + + I RP+LLIT +Y + F +++RR R+E L  TIL TLRN+G+ L+  DTAGR LEL++LL+ +W N ES LMAY L  LN VA NV EFAKS VEWMS+ +M+SFEE R+ PF F++ ++CH++ +LA V +PKV++ S   L  GF RELF + C + KN IILT R     L   L  +      +     +++K R++     L   +  E  + A+ V R ++ K       +GL S ++  +E   +                             G H +   +  G+       +F+  K+   +FP +E K +WD+YGE I ++D  ++    ++     M+ EL                                        SF     ++ +K I++ E L ++ +I+Y +FEG SD  SM ++I++ +P+++I+V GS+E++  +A FC+    + +  V+ P   ++++ T E  I+Q R+ D++VS+L F K  + E++W++A++ D N    + D E  E  E +P + P   + P H  +F+NEPKLSD K  L+  G+ AEF  G L+ ++ VA++++EAG+L LEG +   Y+ +R++LY QFAI+
Sbjct:    2 TSIIKLQPFSGVDGESPPCYMLQVDEFHFLLDCGWDEEFDPVFMENLKKHLPQIDAVLLSYPDPQHLGALPYLVGKCGMTCPIYSTLPVYKMGQMFMYDLYQSHHNSEEFNLFSLDDVDAAFDRIQQ-LKYSQTINLKGKGHGLQITPLPAGHMIGGTIWKIVKDGEEEIIYAVDYNHKRERHLNGCVLETINRPHLLITDAYNADFNQARRRLRDEQLMTTILQTLRNDGNCLVALDTAGRILELAHLLDQMWRNQESGLMAYSLALLNNVAYNVVEFAKSQVEWMSDKIMRSFEERRNNPFQFKHLQLCHSMAELAKVPEPKVVLASTPDLQTGFSRELFVQWCSNPKNCIILTNRTAPPTLCRQLIDY-----PNRGSVRLEVKRRVRLEGRALEDFLRAERERKAE-VEREKAEKERR--EREGLESSDDSADEEVGD----------------------------GGRHDLMVKMEKGK------GFFKQVKKSQAMFPFEEEKLKWDEYGEIIRIED--YIIKEATTMEDEPMHNEL---------------------------------------KSFVTEKTEVPTKCISSSETLELRANILYIDFEGRSDGDSMRKIISQVRPRQLILVRGSRESTESLAAFCRDAPDIGK--VYTPRLNELVDATTESKIFQVRLKDSVVSALNFSKARDAEIAWIDAML-DLNQAEAMEDGENPEDEEAVPVVIPTSQIRP-HGAVFVNEPKLSDFKQTLVNLGVQAEFSAGVLICNSVVAVRKNEAGRLQLEGTLCDDYYRIRQLLYEQFAIV 728
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:103042426])

HSP 1 Score: 365.155 bits (936), Expect = 2.198e-113
Identity = 195/391 (49.87%), Postives = 263/391 (67.26%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            TSII+L A SG  E+   CYLLQVD+F  LLDCGWD +FS + +  + +Y   ++AV +SH D  HLGALPY VGK GL C +YAT PV KMG + +YD Y S+ ++ ++F  FTLDD+D AFD I  +KY Q  NL GKG G++I P  +GHM+GGT+WKI KD + EI+YAVD+NHK+E HLNG   ++I RP+LLIT S+  ++ + +R+QR+E L   I+ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF RELF + C D KN IILT R     L+  L  +  +K+       ++IK+R K
Sbjct:    2 TSIIKLTAVSGVQEESALCYLLQVDEFRFLLDCGWDESFSMDIIDAMKRYVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRHNT-EDFSLFTLDDVDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIIYAVDFNHKREIHLNGCSLESISRPSLLITDSFNATYVQPRRKQRDEQLLTNIMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLTLLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLCSQPDLESGFSRELFIQWCQDSKNSIILTYRTTPGTLARYLIDNPGEKM-----IDLEIKKRTK 386

HSP 2 Score: 181.415 bits (459), Expect = 4.090e-47
Identity = 118/377 (31.30%), Postives = 185/377 (49.07%), Query Frame = 3 
Query: 1530 GQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAV-----IKDANGV-----------------ANIVDELV-------------------------EANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G+    GG +F+  K+ + +FPS E + +WD+YGE I    P     P     + A  +E     +   SG  N                    M  +L       D     + TT+ L ++  + Y ++EG SD  S+ ++I + KP++++IV G  EAS  +A+ CK     K+  V+ P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V     +K   GV                  ++  EL                          E++ IPTLEP P    P H  +FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG   + Y+ +R++LY Q+A++
Sbjct:  446 GEGGRKGG-FFKQAKKSYPMFPSHEERIKWDEYGEIIR---PEEFLVP----ELQATEEE----KSKLESGMANGDEP----------------MDQDL------SDVPTKCTCTTENLEIRARVTYIDYEGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLADSCKA-FCGKDIKVYTPKLQETVDATSETHIYQVRLKDSLVSSLQFCKARDTELAWIDGVLDMRVVKVDTGVLAEEGDTRDEAEEGELSMDVSSELATEPSAMATQRAMKTLFGEDEKEISEESDVIPTLEPLPATETPGHQAVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRIGLEGCQCEDYYRIRELLYQQYAVV 787
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:103042426])

HSP 1 Score: 181.8 bits (460), Expect = 3.255e-48
Identity = 118/377 (31.30%), Postives = 183/377 (48.54%), Query Frame = 3 
Query: 1530 GQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIK------DANGVANIVDELVEANE-----------------------------------------IPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G+    GG +F+  K+ + +FPS E + +WD+YGE I    P     P     + A  +E     +   SG  N                    M  +L +   K       + TT+ L ++  + Y ++EG SD  S+ ++I + KP++++IV G  EAS  +A+ CK     K+  V+ P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+       D   +A   D   EA E                                         IPTLEP P    P H  +FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG   + Y+ +R++LY Q+A++
Sbjct:  258 GEGGRKGG-FFKQAKKSYPMFPSHEERIKWDEYGEIIR---PEEFLVP----ELQATEEE----KSKLESGMANGDEP----------------MDQDLSDVPTK------CTCTTENLEIRARVTYIDYEGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLADSCKA-FCGKDIKVYTPKLQETVDATSETHIYQVRLKDSLVSSLQFCKARDTELAWIDGVLDMRVVKVDTGVLAEEGDTRDEAEEGELSMDVSSELATEPSAMATQRAMKTLFGEDEKEISEESDVIPTLEPLPATETPGHQAVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTEAGRIGLEGCQCEDYYRIRELLYQQYAVV 599

HSP 2 Score: 175.637 bits (444), Expect = 4.368e-46
Identity = 93/204 (45.59%), Postives = 130/204 (63.73%), Query Frame = 3 
Query:  648 MFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            MF +I RP+LLIT S+  ++ + +R+QR+E L   I+ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH + DLA V  PKV++ SQ  L  GF RELF + C D KN IILT R     L+  L  +  +K+       ++IK+R K
Sbjct:    1 MF-SISRPSLLITDSFNATYVQPRRKQRDEQLLTNIMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLTLLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLCSQPDLESGFSRELFIQWCQDSKNSIILTYRTTPGTLARYLIDNPGEKM-----IDLEIKKRTK 198
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Match: ints11 (integrator complex subunit 11 [Source:NCBI gene;Acc:103024185])

HSP 1 Score: 129.028 bits (323), Expect = 1.406e-30
Identity = 96/343 (27.99%), Postives = 157/343 (45.77%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       Y+ Q  + T+ ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D          E + FT   I D    ++P+   QT  +  +   + I  + +GH+LG  +  I      +VY  DYN   +RHL  A  D   RP++LI+ S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   19 CILVSIGGKNIMLDCGMHMGYNDDRRFPDFSYITQNGRLTEFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDE---LEIKAYYAGHVLGAAMVLIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDILISESTYATTIRDSKRCRERDFLKKVHETIERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Match: cpsf3 (cleavage and polyadenylation specific factor 3 [Source:NCBI gene;Acc:103041693])

HSP 1 Score: 109.383 bits (272), Expect = 3.590e-24
Identity = 91/366 (24.86%), Postives = 170/366 (46.45%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++++ D I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   ++ +P++LIT S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ V  M++ + ++     + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   34 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPSV-KPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAIN--INNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 378
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Match: cpsf3 (cleavage and polyadenylation specific factor 3 [Source:NCBI gene;Acc:103041693])

HSP 1 Score: 108.997 bits (271), Expect = 4.478e-24
Identity = 91/366 (24.86%), Postives = 170/366 (46.45%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++++ D I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   ++ +P++LIT S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ V  M++ + ++     + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   34 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPSV-KPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAIN--INNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 378
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006932.1 (pep scaffold:Pmarinus_7.0:GL476370:652825:673040:-1 gene:ENSPMAG00000006205.1 transcript:ENSPMAT00000006932.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 360.918 bits (925), Expect = 1.647e-112
Identity = 193/417 (46.28%), Postives = 277/417 (66.43%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQS 1334
            TSII+L A SG  ++   CYLLQVD+F  LLDCGWD NF  ++V+ + ++   I+AV +SH D  HLGALP+ VGK GL C +YAT PV KMG + +YD Y S+ +S ++F+ FTLDD+D AFD I  +KY Q   L GKG G++I P  +GHM+GGT+WKI KD + EI+YAVDYNHK+E HLNG   + + RP+LLIT S   ++ +++R+QR+E L   IL TLR +G+VL+  DTAGR LEL+ LL+ +W   ++ L AY L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH++ DLA V  PKV++ SQ  L  GF RELF + C D ++ +I T R     L+  L +     ++ +E   ++I++R+K    +L   +  + +K  ++  + Q+
Sbjct:    2 TSIIKLTALSGVQDEGALCYLLQVDEFRFLLDCGWDENFKADFVEILKRHIHQIDAVLLSHPDTPHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNS-EDFNLFTLDDVDAAFDKIQQLKYNQIVYLKGKGHGLSITPLPAGHMIGGTVWKIVKDGEEEIIYAVDYNHKREIHLNGCALETVTRPSLLITDSLNATYVQARRKQRDEQLLTNILETLRGDGNVLLAVDTAGRVLELAQLLDQIWRTKDAGLGAYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLADLAKVPSPKVVLCSQPDLECGFSRELFIQWCSDPRHCVIFTARTMPGTLARTLIEK--PGLRRAE---LEIRKRVKLEGKELEEYMEKDKIKKEEAKKQEQA 412

HSP 2 Score: 162.925 bits (411), Expect = 9.083e-42
Identity = 108/377 (28.65%), Postives = 181/377 (48.01%), Query Frame = 3 
Query: 1551 GQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVANIVDELVEANEIPTLE-------------------------------------------PPEG-VIP-----------EHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            G +F+  K+ + ++PS E K +WDDYGE I    P   + P           EL   D   + G   +H A    +      Q+L  +    ++S             +  + ++  +IY ++EG SD  S+ ++I++ +P++++IV G  +A+  +A+ C+     KE  V+ P   + ++ T E  IYQ R+ D+LVSSL F +  + EL+W+E  +     VA +   +V  +  P  +                                           P EG +IP           +H  +FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG I + Y+ +R +LY Q+AI+
Sbjct:  451 GSFFKHAKKSYPMYPSTEEKIKWDDYGEIIK---PEDFFMP-----------ELPSVDE--DKGVEAHHQAEEAME------QDLTDVPTKCISS-------------SHTVDIRAKLIYIDYEGRSDGESLKKLISQMRPRQLVIVHGPPDATRHLADACRA-FGGKEMKVYTPRLHETVDATSENLIYQVRLKDSLVSSLRFCRARDAELAWIEGALD--LRVARVDTGVVPEDGTPRDDENAAAAAAAAAAGTSAGGSAQPLAGLFIDEDATTAAAARVAVGPEEGDIIPTLEPLQPNEAQDHAAVFINEPRLSDFKQVLLREGIQAEFIGGVLVCNNVVAVRRTEAGRIGLEGCICEDYYKIRDLLYQQYAIV 789
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Sea Lamprey
Match: cpsf3 (cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275])

HSP 1 Score: 105.531 bits (262), Expect = 6.530e-24
Identity = 93/368 (25.27%), Postives = 168/368 (45.65%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCG----WDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEH---LWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEP 1226
            C +L+      +LDCG     D   +  Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   ++  ++   +   +T  D++D+ D I  + + + K +     GV    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   +++   L+I S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L H    W N    L    +   + +A       ++ V  M++ + +      S PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM     SEP
Sbjct:   33 CIILEFKGRKIMLDCGIHPGLDGMDALPYIDIIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDFVKVSNISADDMLYTEQDLEDSMDKIETINFHEVKEV----AGVKFWCYNAGHVLGAAMFMIEIAGVKVLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVQDIVNRGGRCLIPVFALGRAQELLLILVHADEYWGN-HPELHDIPIYYASSLAKKCMAVYQTYVHAMNDKIRKQIS--ISNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM-----SEP 380
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006433.1 (pep scaffold:Pmarinus_7.0:GL482897:11374:16985:1 gene:ENSPMAG00000005816.1 transcript:ENSPMAT00000006433.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.6842 bits (130), Expect = 8.015e-9
Identity = 43/164 (26.22%), Postives = 72/164 (43.90%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYD-SYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ---GVTIVPFLSGHMLGGTLWKITKDDIEIVY 602
            C L+ +   + +LDCG    F+D+       Y+ Q  + T  ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D   ++    G+     +    D        MK     NLH   Q    + I  + +GH+LG  ++++      +VY
Sbjct:   19 CILVSIRGKNIMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDYRKITVDKKGETNFFTSQMIKDC-------MKKVVAVNLHQSVQVDNELEIKAYYAGHVLGAAMFEMRVGPESVVY 175
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Yeast
Match: YSH1 (Endoribonuclease; subunit of the mRNA cleavage and polyadenylation specificity complex; required for 3' processing, splicing, and transcriptional termination of mRNAs and snoRNAs; protein abundance increases in response to DNA replication stress; YSH1 has a paralog, SYC1, that arose from the whole genome duplication [Source:SGD;Acc:S000004267])

HSP 1 Score: 112.849 bits (281), Expect = 4.258e-26
Identity = 85/373 (22.79%), Postives = 164/373 (43.97%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKL----INAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQ--QTKNLHGKGQ--GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLW--HNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLS 1178
            T+  +  +  G+NE    C++LQ      +LD G    +    +  +  Y +     ++ + ISH  + H  +LPY++ +      V+ T+P   +    L D ++   S G         D     D  +   +   +T + H      G+    F +GH+LG  +++I    + +++  DY+ + +RHLN A    +    L++ S++G+     R  RE  L   I +T+   G VL+     GRA E+  +L+  W  H  E       +   + +A       ++ V  M++ + + F + ++ PF F+       +ED  D   P V++ S   L  G  R+L  + C ++KN +++T  + E  ++
Sbjct:    6 TTTFKFFSLGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQG--LASLPFYDEFDLSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRD-FVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHSTVDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREVDRHLNSAEVPPLSSNVLIVESTFGTATHEPRLNRERKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELGGGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFIFKNISYLRNLEDFQDFG-PSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMA 374
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Yeast
Match: CFT2 (Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein. [Source:SGD;Acc:S000004105])

HSP 1 Score: 99.3673 bits (246), Expect = 7.666e-22
Identity = 97/374 (25.94%), Postives = 180/374 (48.13%), Query Frame = 3 
Query:  150 LLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLI---NAVFISHSDIHHLGALPYL----VGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXX-XXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAM--------FDNIQRPNLLITS--SYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALEL-SYLLEHLWHNTE-SSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEM-RSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDK 1208
            +++ D+   L+D GW+ +   +Y Q I  + K+I   + + +S   I  LGA   L             VYAT PV  +G +S  DSY S    G         +  +     I+P+KY Q  +L  +  G+T++ + +G   GG++W I+    ++VYA  +NH ++  LN A            + RP+ +IT+   +GS Q  ++R +    ++T+   L ++GSV+I  D +G+ L+L + + E L+ +T+ ++     ++ L+   G    +AKS +EW+S ++++++E    + PF+           +L+     K+  VS+         E+  K+   EK  +ILT  + E   S D    I+++
Sbjct:   19 VVRFDNVTLLIDPGWNPS-KVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFKKRSKI--FKDTLKKGLSSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIKIIAPNELSKYPGSKICFVSEVG---ALINEVIIKVGNSEKTTLILTKPSFECASSLDKILEIVEQ 386
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Nematostella
Match: EDO46395 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPX1])

HSP 1 Score: 372.089 bits (954), Expect = 3.909e-117
Identity = 194/397 (48.87%), Postives = 273/397 (68.77%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIE-IVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQ-KSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDL 1274
            TSII+L+  SG +++ P CYLLQVD+F  LLDCGW+       ++ I ++ + ++AV +S  DI+H+G LPYLVGKCGL CP+Y T PV KMG + +YD Y    +S +EFD F+LDD+D  FD II +KY QT +L GKG G+TI P+ +GHM+GGT+WKI KD  E I+YAVDYNHKKERHLNGA+ + + RP+LLIT S+ +   +++RR+R+  L   IL T+R +G+V+I  DTAGR LELS LL+ LW N +S L AY L  LN V+ NV EFAKS VEWMS+ +M++FE  R+ P+ FRY  +CH++ DLA V +PKV++ S   L  GF R+LF +   + KN +I T R+    L+  L  ++  ++K  E   +++K+R++    +L
Sbjct:    2 TSIIKLNVLSGAHDEAPLCYLLQVDEFRFLLDCGWNETLDMEIMESIKRHVQQVDAVLVSFPDIYHMGGLPYLVGKCGLHCPIYTTIPVYKMGQMFMYDWYQCHQNS-EEFDVFSLDDVDAVFDKIIQLKYSQTVSLKGKGHGITITPYAAGHMIGGTMWKIVKDGEEDIIYAVDYNHKKERHLNGAVLETLSRPSLLITDSFNALNIQTRRRERDTQLMGEILKTMRRHGNVMIAIDTAGRVLELSQLLDQLWRNLDSGLSAYSLAMLNNVSYNVIEFAKSQVEWMSDKIMKAFEIGRNNPYQFRYCHLCHSLADLARVPEPKVVLASMMDLTAGFSRDLFVEWADNPKNTVIFTARSSPGTLARTLIDNL--ELKQVE---LEVKQRVRLGGEEL 392

HSP 2 Score: 160.229 bits (404), Expect = 9.128e-41
Identity = 98/334 (29.34%), Postives = 173/334 (51.80%), Query Frame = 3 
Query: 1560 FRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKE-LSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEA------------VIKDANGVANIVDELVEA-NEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            F    R   +FP  E K +WDDYGE I  +D               M +EL               +   + QK++ +   +                  +K I+ K+ +S++C++ + +FEG SD  S+ +++    P+++++V G  +++  +A++C+++  ++ + V  P  G+ +  T E HIYQ ++ DALVSSL F +  + EL+W++             ++ D  G   +  +  EA + +P LE      I  H ++FINEP+LSD K +L K G+ AEF GG L+ +N V ++R+E G++ LEG + + Y+ +R +LYSQ+AI+
Sbjct:  449 FFKQARSFPMFPCHEEKAKWDDYGEFIRPED--------------YMQREL--------------SATEEEKQKVVRDLSKVP-----------------TKCISQKKTVSIRCTLAFIDFEGRSDGESIKRILNLVNPRKLVLVHGDSKSTQHLADYCQSSSSIQVSQVFTPAVGETVEATGERHIYQVKLRDALVSSLQFAQARDAELAWIDGQLDMKLAPANQDLMGDKPGEEKMETDQDEALDTVPVLEQNTSSKIAGHVSVFINEPRLSDFKQVLNKAGIQAEFAGGVLICNNVVCVRRNETGRVGLEGTVCEDYYTIRDLLYSQYAIV 737
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Nematostella
Match: EDO47866 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL47])

HSP 1 Score: 118.242 bits (295), Expect = 7.980e-28
Identity = 93/338 (27.51%), Postives = 147/338 (43.49%), Query Frame = 3 
Query:  177 LLDCGWDSNFSD-------NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQS------FEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            +LDCG    ++D       +Y+ +  K T+ ++ V ISH  + H GALPY     G   P+Y T+P   +  + L D          E + FT   I D    ++P+   Q+  +  +   + I  + +GH+LG  ++ +      +VY  DYN   +RHL  A  D   RP++LIT S+Y +  +  +R RE +    +  T+   G VLI     GRA EL  LLE  W         Y    L   A   N + K  + W ++ +  +      FE    KPFD  Y           D   P V+  +   L+ G   ++F K   +E N +++
Sbjct:    1 MLDCGMHMGYNDERRFPDFDYITRSGKLTEHLDCVLISHFHLDHCGALPYFSEMVGYDGPIYMTHPTKAICPILLEDYRKITVERKGETNFFTSQMIKDCMKKVVPINLHQSIKVDDE---LEIKAYYAGHVLGAVMFHMRVGTESVVYTGDYNMTPDRHLGSAWIDKC-RPDILITESTYATTIRDSKRCRERDFLKKVHETMEKGGKVLIPVFALGRAQELCILLETYWERMNLKAPIYFSTGLTEKA---NHYYKLFITWTNQKIKNTFVQRNMFEFEHIKPFDRSYI----------DNPGPMVVFATPGMLHAGLSLQIFKKWASNENNMVVI 321
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Nematostella
Match: EDO39587 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9J6])

HSP 1 Score: 115.931 bits (289), Expect = 1.159e-26
Identity = 96/387 (24.81%), Postives = 178/387 (45.99%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQ 1238
            + ++R+       E    C++L+      +LDCG     +      ++ +I   T  I+ + +SH  + H G+LP+L+ K      V+ T+  +K  +  L   Y+  ++   E   FT  D++ + D I  + + Q K +     G+    + +GH+LG  ++ +    ++I+Y  D++ +++RHL  A   +I    L+I S+YG+    +R +RE     T+   +   G  LI     GRA EL  +L+  W N    L    +   +++A       ++ V  M++ + +      S PF F++     +I+   D+  P V++ S   +  G  RELF + C D +N +I+       C+   L K++M     SEP  VQ
Sbjct:   18 SDLLRITPLGSGQEVGRSCHILEFKGKKVMLDCGIHPGMTGVESLPFLDEID--TAEIDLLLVSHFHLDHCGSLPWLLEKTTFKGRVFMTH-ATKAIYRWLLSDYVKVSNIAAEDMLFTESDLEKSMDKIETLHFHQEKEV----GGIKFWCYHAGHVLGACMFMLEIAGVKILYTGDFSRQEDRHLMAAEIPSISPDVLIIESTYGTHIHEKREEREARFTGTVHDIVNRGGRCLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASQLAKKCMSVFQTYVNAMNDKIKKQI--AISNPFVFKHISNLKSIDQFDDIG-PSVVMASPGMMQSGLSRELFEQWCTDRRNGVIIAGY----CVEGTLAKNLM-----SEPEEVQ 384
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Nematostella
Match: EDO29004 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T4V8])

HSP 1 Score: 93.2041 bits (230), Expect = 3.783e-20
Identity = 57/224 (25.45%), Postives = 107/224 (47.77%), Query Frame = 3 
Query:  516 GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDL 1187
            G+    + +GH+LG  ++ +    ++I+Y  D++ +++RHL  A   +I    L+I S+YG+    +R +RE     T+   +   G  LI     GRA EL  +L+  W N    L    +   +++A       ++ V  M++ + +      S PF F++     +I+   D+  P V++ S   +  G  RELF + C D +N +I+     E  L+ ++
Sbjct:   83 GIKFWCYHAGHVLGACMFMLEIAGVKILYTGDFSRQEDRHLMAAEIPSISPDVLIIESTYGTHIHEKREEREARFTGTVHDIVNRGGRCLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASQLAKKCMSVFQTYVNAMNDKIKKQI--AISNPFVFKHISNLKSIDQFDDIG-PSVVMASPGMMQSGLSRELFEQWCTDRRNGVIIAGYCVEGTLAKEV 302
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Medaka
Match: cpsf2 (cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:101164198])

HSP 1 Score: 291.197 bits (744), Expect = 3.383e-86
Identity = 169/391 (43.22%), Postives = 233/391 (59.59%), Query Frame = 3 
Query:   90 TSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKD-DIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSY-GSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            TSII+L A SG  E+   CYLLQVD+F  LLDCGWD +FS + +                                               MG + +YD Y S+ +S ++F  FTLDD+D AFD I  +KY Q  NL GKG G++I P  +GHM+GGT+WKI KD + EIVYAVD+NHK+E HLNG   ++I RP+LLIT S+  ++ + +R+QR+E L   ++ TLR +G+VLI  DTAGR LEL+ LL+ +W   ++ L  Y L  LN V+ NV EF+KS VEWMS+ +M+ FE+ R+ PF FR+  +CH++ DLA V  PKV++ SQ  L  GF RELF + C + KN IILT R     L   L  H  +K+       +++++R+K
Sbjct:    2 TSIIKLTAVSGVQEESALCYLLQVDEFRILLDCGWDEHFSMDIID----------------------------------------------MGQMFMYDLYQSRNNS-EDFTLFTLDDVDSAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCTLESINRPSLLITDSFNATYVQPRRKQRDEQLLTNVMETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGTYPLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLNLCHSLADLARVPSPKVVLCSQPDLESGFSRELFIQWCQNSKNSIILTYRTTPGTLGRYLIDHPGEKM-----LDLEVRKRVK 340

HSP 2 Score: 184.496 bits (467), Expect = 2.518e-48
Identity = 117/392 (29.85%), Postives = 191/392 (48.72%), Query Frame = 3 
Query: 1488 EPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIK-----------------------------------DANGVANIVDELV-------------EANEIPTLEP-PEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            +P  +     D+         G +F+  K+ + +FP+ E + +WD+YGE I ++D  FL  P    A +  +K         +SG TN               Q+L+++    +++              + L ++  I Y ++EG SD  S+ ++I + KP++++IV G  EAS  +A  CK     K+  V+ P   + ++ T E HIYQ R+ D+LVSSL F K  + EL+W++ V+                                    D N  A      +             E++ IPTLEP P   IP H  +FINEP+LSD K +L++EG+ AEF+GG LV +N VA++R+EAG++ LEG +   Y+ +R++LY Q+A++
Sbjct:  385 QPVAVKTKHHDLMMKSEGSRKGSFFKQAKKSYPMFPTHEERIKWDEYGEIIRLED--FL-VPELQAAEDEKSK--------LDSGLTNGDEPM---------DQDLSVVPTKCISNM-------------ENLEIRARITYIDYEGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAESCKAF--SKDIKVYTPKLQETVDATSETHIYQVRLKDSLVSSLQFCKAKDTELAWIDGVLDMRVVKVDTGVMLEDRVKEEEEDGEMPMETGQEVGIDHNATAVAAQRAMKNLFGEDEKEVSEESDVIPTLEPLPLTEIPGHQAVFINEPRLSDFKQVLLREGIQAEFVGGVLVCNNMVAVRRTEAGRIGLEGCLCDDYYKIRELLYQQYAVV 741
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Medaka
Match: ints11 (integrator complex subunit 11 [Source:NCBI gene;Acc:101158609])

HSP 1 Score: 127.102 bits (318), Expect = 5.420e-30
Identity = 95/343 (27.70%), Postives = 156/343 (45.48%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       YV Q  + T  ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D          E + FT   I D    ++P+   QT  +  +   + I  + +GH+LG  +  I      +VY  DYN   +RHL  A  D   RP++LI+ S+Y +  +  +R RE +    +  ++   G VLI     GRA EL  LLE  W         Y    +   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   19 CILVSIGGKNIMLDCGMHMGYNDDRRFPDFSYVTQNGRLTDFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDE---LEIKAYYAGHVLGAAMVYIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDILISESTYATTIRDSKRCRERDFLKKVHESIERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGMTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Medaka
Match: ints11 (integrator complex subunit 11 [Source:NCBI gene;Acc:101158609])

HSP 1 Score: 126.716 bits (317), Expect = 7.665e-30
Identity = 95/343 (27.70%), Postives = 156/343 (45.48%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDN-------YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIIL 1148
            C L+ +   + +LDCG    ++D+       YV Q  + T  ++ V ISH  + H GALPY+    G   P+Y T+P   +  + L D          E + FT   I D    ++P+   QT  +  +   + I  + +GH+LG  +  I      +VY  DYN   +RHL  A  D   RP++LI+ S+Y +  +  +R RE +    +  ++   G VLI     GRA EL  LLE  W         Y    +   A   N + K  + W ++ + ++F  ++   F+F++ K        AD   P V+  +   L+ G   ++F K   +EKN +I+
Sbjct:   25 CILVSIGGKNIMLDCGMHMGYNDDRRFPDFSYVTQNGRLTDFLDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDE---LEIKAYYAGHVLGAAMVYIKVGSESVVYTGDYNMTPDRHLGAAWIDKC-RPDILISESTYATTIRDSKRCRERDFLKKVHESIERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGMTEKA---NHYYKLFITWTNQKIRKTF--VQRNMFEFKHIKAFD--RSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 356
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Medaka
Match: cpsf3 (cleavage and polyadenylation specific factor 3 [Source:NCBI gene;Acc:101164375])

HSP 1 Score: 108.612 bits (270), Expect = 6.612e-24
Identity = 87/358 (24.30%), Postives = 167/358 (46.65%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSD----NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIM 1202
            C +L+      +LDCG            Y+  I      I+ + ISH  + H GALP+ + K       + T+  +K  +  L   Y+  ++   +   +T  D++D+ + I  + + + K +     G+    + +GH+LG  ++ I    ++++Y  D++ +++RHL  A   ++ +P++LIT S+YG+    +R +RE    NT+   +   G  LI     GRA EL  +L+  W N    L    +   + +A       ++ +  M++ + ++     + PF F++     +++   D+  P V++ S   +  G  RELF   C D++N +I+       C+   L KHIM
Sbjct:   34 CIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE--IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH-ATKAIYRWLLSDYIKVSNISADEMLYTETDLEDSMEKIETINFHEVKEV----AGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPSV-KPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRAQELLLILDEYWQN-HPELHDIPIYYASSLARKCMAVYQTYINAMNDKIRKAIN--VNNPFVFKHISNLKSMDHFDDIG-PSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGY----CVEGTLAKHIM 375
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Match: SMESG000050351.1 (SMESG000050351.1)

HSP 1 Score: 1580.84 bits (4092), Expect = 0.000e+0
Identity = 810/811 (99.88%), Postives = 811/811 (100.00%), Query Frame = 3 
Query:   84 MATSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDXXXXXXXXXXXXAALPNILSKXXXXXXXXXXXXLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVANIVDELVEANEIPTLEPPEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 2516
            MATSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGDEFDKFTLDDIDDAFDLIIPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDEEVEEEVKMEWEAALPNILSKDNIYNIQDNNNNLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAK+QKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVANIVDELVEANEIPTLEPPEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL
Sbjct:    1 MATSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGDEFDKFTLDDIDDAFDLIIPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLITSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLKITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDEEVEEEVKMEWEAALPNILSKDNIYNIQDNNNNLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLHLVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYFNSGNTNNHSANAKNQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKELSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFCKTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYELSWLEAVIKDANGVANIVDELVEANEIPTLEPPEGVIPEHNTIFINEPKLSDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDVRKVLYSQFAIL 811
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Match: SMESG000067453.1 (SMESG000067453.1)

HSP 1 Score: 134.42 bits (337), Expect = 2.690e-32
Identity = 113/382 (29.58%), Postives = 168/382 (43.98%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGW------DSNFSD-NYVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYD-SYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQGVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQR--PNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIK 1256
            C L+ +   + + DCG       +  F D +Y+ +     + +N V ISH  + H GALPY     G   P+Y T+P   +  + L D   L+    GD+              +     +Q  K        + I PF +GH+LG  ++ +    + ++Y  DYN   +RHL  A   NI R  PNLLIT ++Y +  +  +R RE    + IL TL N G VLI     GRA EL  LLE  W     S   Y    +   A   NE+ K  V W +E + ++F E     FDF++ K    ++   + S P V+  S   L+ G    +F K   +EKN +I+       C++  +   I   VK  E     I  RIK
Sbjct:   19 CILVSLGGKNIMFDCGMHMGYNNEKRFPDFSYITRSQSVDEYLNCVIISHFHLDHCGALPYFTEMVGYNGPIYMTHPTKAICPILLEDYRKLTVDKRGDQNFFTQEMIFKCMKKVKCVYLHQMIK----VDDELEIQPFYAGHVLGAAMFLVKVGKLSVLYTGDYNMTPDRHLGAA---NISRCEPNLLITETTYATTIRDSKRVREREFIDKILATLANGGKVLIPVFALGRAQELCILLESYWDRMNLSYPIYLSTGMGEKA---NEYYKLFVSWTNEKIKETFVE--RNMFDFKHVK--PLLQGDENKSMPMVVFASPGMLDGGHSLNIFKKWANNEKNMVIIP----GYCVAGTVGHKIQSNVKKIEFDKQTIDVRIK 382
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Match: SMESG000066903.1 (SMESG000066903.1)

HSP 1 Score: 109.768 bits (273), Expect = 3.434e-25
Identity = 90/359 (25.07%), Postives = 159/359 (44.29%), Query Frame = 3 
Query:  144 CYLLQVDDFHCLLDCGWDSNFSDNYVQ---QISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ--GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIM 1202
            C LL+      +LDCG       +       I    +  + + ISH  + H GALP+L+ K GL    Y T+    +    L D Y+  +++G        +           +    T + H + +  G+    + +GH+LG  ++ I    ++I+Y  D++ +++RHL  A      RP +LIT ++YG+    +R +RE      +   +   G  LI +   GRA EL  +L+  W +    L +  +   +++A       ++ +  M+E V +  +E    PF F++      I+DL D + P V++ S   +  G  RELF   C D +N +I+       C+   L K I+
Sbjct:   31 CVLLKFKGKKIILDCGIHPGLRGSECLPFLDIIDDIEETDLILISHFHLDHCGALPHLLFKTGLRSRCYMTHATKAIYRYILAD-YIRVSNNGSSAHSLYNERDIINS-----LDKIDTIDFHQQIEINGIKFTAYHAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMSAEIPP-ARPEVLITEATYGTHIHDKREEREARFTTLVHNIVSRGGRCLIPAFALGRAQELMLILDEYW-SQHPELQSIPIYYASQLARKCISVYQTYIHAMNERVRKQ-QEANQNPFVFQHISNLRAIDDLDD-NRPCVVMASPGMMQSGLSRELFENWCYDARNGVIIA----GYCVEGTLAKQIL 375
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Match: SMESG000066903.1 (SMESG000066903.1)

HSP 1 Score: 110.538 bits (275), Expect = 8.208e-25
Identity = 95/377 (25.20%), Postives = 165/377 (43.77%), Query Frame = 3 
Query:   99 IRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDN----YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ--GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLW--HNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIM 1202
            +++       E    C LL+      +LDCG       +    ++  I    +  + + ISH  + H GALP+L+ K GL    Y T+    +    L D Y+  +++G        +           +    T + H + +  G+    + +GH+LG  ++ I    ++I+Y  D++ +++RHL  A      RP +LIT ++YG+    +R +RE      +   +   G  LI +   GRA EL  +L+  W  H    S+  Y    L R   +V +   + +  M+E V +  +E    PF F++      I+DL D + P V++ S   +  G  RELF   C D +N +I+       C+   L K I+
Sbjct:   16 LKITPLGAGQEVGRSCVLLKFKGKKIILDCGIHPGLRGSECLPFLDIIDDIEE-TDLILISHFHLDHCGALPHLLFKTGLRSRCYMTHATKAIYRYILAD-YIRVSNNGSSAHSLYNERDIINS-----LDKIDTIDFHQQIEINGIKFTAYHAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMSAEIPP-ARPEVLITEATYGTHIHDKREEREARFTTLVHNIVSRGGRCLIPAFALGRAQELMLILDEYWSQHPELQSIPIYYASQLARKCISVYQ---TYIHAMNERVRKQ-QEANQNPFVFQHISNLRAIDDLDD-NRPCVVMASPGMMQSGLSRELFENWCYDARNGVIIA----GYCVEGTLAKQIL 375
[Close]
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Match: SMESG000066903.1 (SMESG000066903.1)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-24
Identity = 95/377 (25.20%), Postives = 165/377 (43.77%), Query Frame = 3 
Query:   99 IRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDN----YVQQISKYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLYDSYLSKASSGXXXXXXXXXXXXXXXXXXXPMKYQQTKNLHGKGQ--GVTIVPFLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLIT-SSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLLEHLW--HNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRSKPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEKNQIILTCRNREKCLSNDLFKHIM 1202
            +++       E    C LL+      +LDCG       +    ++  I    +  + + ISH  + H GALP+L+ K GL    Y T+    +    L D Y+  +++G        +           +    T + H + +  G+    + +GH+LG  ++ I    ++I+Y  D++ +++RHL  A      RP +LIT ++YG+    +R +RE      +   +   G  LI +   GRA EL  +L+  W  H    S+  Y    L R   +V +   + +  M+E V +  +E    PF F++      I+DL D + P V++ S   +  G  RELF   C D +N +I+       C+   L K I+
Sbjct:   16 LKITPLGAGQEVGRSCVLLKFKGKKIILDCGIHPGLRGSECLPFLDIIDDIEE-TDLILISHFHLDHCGALPHLLFKTGLRSRCYMTHATKAIYRYILAD-YIRVSNNGSSAHSLYNERDIINS-----LDKIDTIDFHQQIEINGIKFTAYHAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMSAEIPP-ARPEVLITEATYGTHIHDKREEREARFTTLVHNIVSRGGRCLIPAFALGRAQELMLILDEYWSQHPELQSIPIYYASQLARKCISVYQ---TYIHAMNERVRKQ-QEANQNPFVFQHISNLRAIDDLDD-NRPCVVMASPGMMQSGLSRELFENWCYDARNGVIIA----GYCVEGTLAKQIL 375
The following BLAST results are available for this feature:
BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CPSF22.123e-11148.85cleavage and polyadenylation specific factor 2 [So... [more]
CPSF23.602e-3434.53cleavage and polyadenylation specific factor 2 [So... [more]
INTS115.812e-3228.21integrator complex subunit 11 [Source:HGNC Symbol;... [more]
INTS111.176e-3128.86integrator complex subunit 11 [Source:HGNC Symbol;... [more]
INTS111.891e-3029.22integrator complex subunit 11 [Source:HGNC Symbol;... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
cpsf-23.502e-11334.16Probable cleavage and polyadenylation specificity ... [more]
F10B5.82.190e-2625.36pep chromosome:WBcel235:II:8141213:8143478:-1 gene... [more]
cpsf-37.700e-2224.93Cleavage and Polyadenylation Specificity Factor [... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Cpsf1001.554e-17236.86gene:FBgn0027873 transcript:FBtr0085357[more]
IntS119.746e-2928.70gene:FBgn0039691 transcript:FBtr0085476[more]
Cpsf735.878e-2424.42gene:FBgn0261065 transcript:FBtr0083690[more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
cpsf24.734e-17337.24cleavage and polyadenylation specific factor 2 [So... [more]
cpsf24.734e-17337.24cleavage and polyadenylation specific factor 2 [So... [more]
cpsf28.828e-9532.03cleavage and polyadenylation specific factor 2 [So... [more]
ints111.034e-3128.28integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
ints111.713e-3128.28integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
zbtb143.931e-11248.34zinc finger and BTB domain containing 14 [Source:X... [more]
ENSXETT00000019694.14.127e-3027.67integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
ENSXETT00000019703.14.941e-3027.67integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
ENSXETT00000033703.18.028e-3027.67integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
cpsf33.677e-2524.66cleavage and polyadenylation specific factor 3 [So... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Cpsf23.161e-17037.43cleavage and polyadenylation specific factor 2 [So... [more]
Ints116.261e-3227.93integrator complex subunit 11 [Source:MGI Symbol;A... [more]
Ints111.197e-2525.20integrator complex subunit 11 [Source:MGI Symbol;A... [more]
Cpsf38.588e-2524.93cleavage and polyadenylation specificity factor 3 ... [more]
Cpsf32.176e-2424.93cleavage and polyadenylation specificity factor 3 ... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9V3D6|CPSF2_DROME1.558e-17136.86Probable cleavage and polyadenylation specificity ... [more]
sp|O35218|CPSF2_MOUSE2.211e-16937.43Cleavage and polyadenylation specificity factor su... [more]
sp|Q9W799|CPSF2_XENLA2.966e-11248.36Cleavage and polyadenylation specificity factor su... [more]
sp|O17403|CPSF2_CAEEL4.455e-11234.16Probable cleavage and polyadenylation specificity ... [more]
sp|Q10568|CPSF2_BOVIN7.066e-11149.10Cleavage and polyadenylation specificity factor su... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A131YJH70.000e+039.88Cleavage and polyadenylation specificity factor su... [more]
A0A224YVF70.000e+039.63Cleavage and polyadenylation specificity factor su... [more]
A0A4D5RBS30.000e+039.83Cleavage and polyadenylation specificity factor su... [more]
A0A1E1XLS10.000e+039.88Cleavage and polyadenylation specificity factor su... [more]
R7V1Z31.813e-18037.79Cleavage and polyadenylation specificity factor su... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
cpsf22.198e-11349.87cleavage and polyadenylation specific factor 2 [So... [more]
cpsf23.255e-4831.30cleavage and polyadenylation specific factor 2 [So... [more]
ints111.406e-3027.99integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
cpsf33.590e-2424.86cleavage and polyadenylation specific factor 3 [So... [more]
cpsf34.478e-2424.86cleavage and polyadenylation specific factor 3 [So... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSPMAT00000006932.11.647e-11246.28pep scaffold:Pmarinus_7.0:GL476370:652825:673040:-... [more]
cpsf36.530e-2425.27cleavage and polyadenylation specific factor 3 [So... [more]
ENSPMAT00000006433.18.015e-926.22pep scaffold:Pmarinus_7.0:GL482897:11374:16985:1 g... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
YSH14.258e-2622.79Endoribonuclease; subunit of the mRNA cleavage and... [more]
CFT27.666e-2225.94Subunit of the mRNA cleavage and polyadenlylation ... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO463953.909e-11748.87Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO478667.980e-2827.51Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO395871.159e-2624.81Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO290043.783e-2025.45Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
cpsf23.383e-8643.22cleavage and polyadenylation specific factor 2 [So... [more]
ints115.420e-3027.70integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
ints117.665e-3027.70integrator complex subunit 11 [Source:NCBI gene;Ac... [more]
cpsf36.612e-2424.30cleavage and polyadenylation specific factor 3 [So... [more]
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BLAST of Cleavage and polyadenylation specificity factor subunit 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000050351.10.000e+099.88SMESG000050351.1[more]
SMESG000067453.12.690e-3229.58SMESG000067453.1[more]
SMESG000066903.13.434e-2525.07SMESG000066903.1[more]
SMESG000066903.18.208e-2525.20SMESG000066903.1[more]
SMESG000066903.11.296e-2425.20SMESG000066903.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30021904 ID=SMED30021904|Name=Cleavage and polyadenylation specificity factor subunit 2|organism=Schmidtea mediterranea sexual|type=transcript|length=2545bp
ATTGAATTTAAATTGAATTTTAATAAATTTGTTTTAATATTTGTATTTTA
ATAATTAATTTTTGAATTTAATTATTTTTTACAATGGCAACCTCTATAAT
TAGGCTGCATGCATTTTCAGGAACAAATGAAGATGACCCTCCTTGTTACC
TTTTACAAGTTGATGATTTTCATTGTTTATTAGACTGTGGCTGGGATTCT
AATTTTTCAGATAATTATGTTCAACAAATTTCCAAATATACCAAACTTAT
CAATGCTGTATTTATTTCTCATTCAGACATTCATCATCTAGGCGCTTTGC
CATATTTAGTTGGGAAATGTGGATTAACTTGTCCAGTTTATGCCACTTAT
CCCGTTTCTAAAATGGGTCATTTATCTTTATATGATAGTTACTTATCTAA
AGCTTCAAGTGGAGATGAATTCGATAAATTTACTTTAGATGATATTGATG
ATGCTTTTGATTTAATAATTCCTATGAAATATCAACAAACAAAAAATTTA
CATGGTAAAGGCCAAGGAGTTACTATTGTTCCTTTTTTATCTGGTCATAT
GCTTGGAGGAACACTTTGGAAAATAACTAAAGATGATATTGAAATAGTTT
ACGCTGTTGATTATAATCATAAAAAAGAAAGACACTTAAATGGAGCTATG
TTTGATAATATTCAAAGACCCAATCTTTTAATTACAAGCTCCTATGGATC
ATTTCAAAAGTCTCAACGGCGACAAAGAGAAGAAAATTTACGAAATACGA
TTCTCACTACTTTGAGGAATAATGGAAGCGTTTTAATACTGTCCGATACG
GCTGGTCGGGCGTTGGAATTGTCATATCTCCTAGAACATTTGTGGCACAA
CACCGAGTCGAGTCTAATGGCGTACGGGTTAGTGAATCTAAATCGTGTCG
CCGGCAATGTCAACGAATTCGCAAAATCCACAGTCGAATGGATGTCGGAA
ACTGTGATGCAGTCATTCGAGGAAATGCGCTCAAAACCCTTCGATTTCCG
ATACACGAAAATCTGCCACACAATTGAAGATCTCGCTGACGTTTCCGATC
CGAAAGTTATTGTCGTTTCCCAGTCGCATTTGAATTACGGTTTCGGTCGG
GAATTGTTTTCGAAAATGTGTTGTGATGAAAAGAATCAGATAATTCTCAC
TTGTCGAAACCGGGAAAAATGTTTGTCCAATGATTTGTTCAAGCATATCA
TGGACAAGGTGAAATCATCGGAACCGTTTACTGTGCAAATCAAGGAACGA
ATCAAGCAAAACAATTCGGATTTGTATTTGAAAATCACTCCGGAAATTGT
CAAATCAGCTGATTCGGTTTTGCGCAGTCAATCGATTAAAAATAACACCC
TGGATAATATCGATGGATTGAGTTCCGATGAAGAAGTGGAAGAGGAAGTG
AAAATGGAATGGGAAGCAGCCTTACCGAACATTTTATCGAAAGACAATAT
TTATAATATTCAAGATAACAATAACAATTTGTCATCGGAACCGAACGGAA
TCCACATAATCGGAAGTGATATTTATCCCGGTCAATATGCACATTCCGGC
GGCCAATGGTTTCGGGCTACAAAACGGTTGCATTTAGTGTTCCCTAGCCA
GGAAACCAAATGCCAATGGGATGACTATGGTGAACCCATTAATGTAAAAG
ATCCCAACTTTTTATACACACCTGGCAGTTCTTATGCTATAAATGCCATG
AATAAAGAACTGATGATCCGTGATGCCTATTTCAATAGCGGCAATACTAA
TAACCACAGCGCAAATGCCAAAAGCCAGAAATTGATTCTCAATCCACAAA
ATTTGGCAATTATGACGAATAATCTCGTCAATTCTTTCGGGAAAAGAGAT
GATCAGATATCAAAATCAATCACCACAAAGGAATTATCAGTGAAATGCTC
GATAATTTATCAGAATTTCGAGGGTCTTTCAGATTCTTCCTCTATGACTC
AGATGATTGCACGATGCAAGCCACAGGAAATAATAATCGTTGGTGGCTCT
AAAGAAGCCAGTAATATCATGGCAAATTTTTGTAAAACTAATTTGCAAAT
GAAAGAAACTCTCGTTCACATTCCCGATAATGGGAAGGTGATAAACTGTA
CAAAAGAGGGTCACATTTACCAGGCTCGAATGAGTGATGCATTGGTGTCG
AGTCTCACGTTTTATAAAGTCGGTAATTATGAGTTATCGTGGTTGGAGGC
TGTGATTAAAGATGCAAACGGAGTAGCGAATATTGTTGATGAATTGGTGG
AAGCAAATGAAATACCGACTCTAGAGCCCCCGGAAGGAGTGATTCCAGAA
CACAACACAATTTTCATTAATGAGCCAAAATTGTCAGATTTGAAGCATAT
TCTAATGAAGGAAGGCCTCAATGCAGAGTTCATGGGTGGCTATTTGGTGG
TCGATAATTGTGTTGCAATCAAGCGATCAGAAGCTGGAAAACTGTTGTTG
GAAGGTGTTATTGGGAAAACGTATTTTGATGTACGAAAAGTTCTGTATTC
TCAGTTCGCTATTTTATAAATAAATTGTTGTCATTTTAAAAAAAA
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protein sequence of SMED30021904-orf-1

>SMED30021904-orf-1 ID=SMED30021904-orf-1|Name=SMED30021904-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=812bp
MATSIIRLHAFSGTNEDDPPCYLLQVDDFHCLLDCGWDSNFSDNYVQQIS
KYTKLINAVFISHSDIHHLGALPYLVGKCGLTCPVYATYPVSKMGHLSLY
DSYLSKASSGDEFDKFTLDDIDDAFDLIIPMKYQQTKNLHGKGQGVTIVP
FLSGHMLGGTLWKITKDDIEIVYAVDYNHKKERHLNGAMFDNIQRPNLLI
TSSYGSFQKSQRRQREENLRNTILTTLRNNGSVLILSDTAGRALELSYLL
EHLWHNTESSLMAYGLVNLNRVAGNVNEFAKSTVEWMSETVMQSFEEMRS
KPFDFRYTKICHTIEDLADVSDPKVIVVSQSHLNYGFGRELFSKMCCDEK
NQIILTCRNREKCLSNDLFKHIMDKVKSSEPFTVQIKERIKQNNSDLYLK
ITPEIVKSADSVLRSQSIKNNTLDNIDGLSSDEEVEEEVKMEWEAALPNI
LSKDNIYNIQDNNNNLSSEPNGIHIIGSDIYPGQYAHSGGQWFRATKRLH
LVFPSQETKCQWDDYGEPINVKDPNFLYTPGSSYAINAMNKELMIRDAYF
NSGNTNNHSANAKSQKLILNPQNLAIMTNNLVNSFGKRDDQISKSITTKE
LSVKCSIIYQNFEGLSDSSSMTQMIARCKPQEIIIVGGSKEASNIMANFC
KTNLQMKETLVHIPDNGKVINCTKEGHIYQARMSDALVSSLTFYKVGNYE
LSWLEAVIKDANGVANIVDELVEANEIPTLEPPEGVIPEHNTIFINEPKL
SDLKHILMKEGLNAEFMGGYLVVDNCVAIKRSEAGKLLLEGVIGKTYFDV
RKVLYSQFAIL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002056medial muscle cell
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR027075CPSF2
IPR035639CPSF2_MBL
IPR022712Beta_Casp
IPR001279Metallo-B-lactamas
IPR025069Cpsf2_C
IPR011108RMMBL
Vocabulary: cellular component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
Vocabulary: biological process
TermDefinition
GO:0006378mRNA polyadenylation
GO:0006379mRNA cleavage
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 243..361
e-value: 3.3E-8
score: 43.3
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 243..366
e-value: 2.7E-15
score: 56.6
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 23..192
e-value: 5.8E-60
score: 202.1
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 727..808
e-value: 2.0E-23
score: 83.4
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3DG3DSA:3.60.15.10coord: 8..259
e-value: 2.2E-79
score: 268.2
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILYSSF56281Metallo-hydrolase/oxidoreductasecoord: 5..672
IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainPFAMPF07521RMMBLcoord: 601..653
e-value: 2.2E-5
score: 24.3
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 2..811
IPR035639CPSF2, metallo-hydrolase domainCDDcd16293CPSF2-like_MBL-foldcoord: 8..205
e-value: 1.13781E-107
score: 326.014