Myosin, heavy chain 11a, smooth muscle

Overview


Name	Myosin, heavy chain 11a, smooth muscle
Smed ID	SMED30021763
Length (bp)	1403

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Myosin, heavy chain 11a, smooth muscle (SMED30021763) t-SNE clustered cells

Violin plots show distribution of expression levels for Myosin, heavy chain 11a, smooth muscle (SMED30021763) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Myosin, heavy chain 11a, smooth muscle (SMED30021763) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Myosin, heavy chain 11a, smooth muscle (SMED30021763) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30021763

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 6

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
oocyte	SMED30021763	SMESG000018510.1	Contig29597	newmark_ests	PMID:28434803 Rouhana et al., 2017
oocyte	SMED30021763	SMESG000018510.1	Contig29597	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30021763	SMESG000018510.1	Contig29597	newmark_ests	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30021763	SMESG000018510.1	Contig29597	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30021763	SMESG000018510.1	Contig29597	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30021763	SMESG000018510.1	Contig29597	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Match: MYH9 (myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579])

HSP 1 Score: 63.1586 bits (152), Expect = 8.202e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI ++EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEEEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Match: MYH11 (myosin heavy chain 11 [Source:HGNC Symbol;Acc:HGNC:7569])

HSP 1 Score: 56.225 bits (134), Expect = 9.025e-8
Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
             IRQ+  ER F+IFY +++  K ++++ L+L   + + FL N  V I      + F ET+E + IMG +++EQ  I++V+
Sbjct:  271 AIRQARDERTFHIFYYMIAGAKEKMRSDLLLEGFNNYTFLSNGFVPIPAAQDDEMFQETVEAMAIMGFSEEEQLSILKVV 350

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Match: MYH10 (myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568])

HSP 1 Score: 55.8398 bits (133), Expect = 1.570e-7
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            +RQ+  ER F+IFYQLLS   E LK+ L+L   + +RFL N  + I G      F ET+E + IMG + +E   +++V+
Sbjct:  282 VRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVV 360

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Match: MYH10 (myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568])

HSP 1 Score: 55.8398 bits (133), Expect = 1.623e-7
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            +RQ+  ER F+IFYQLLS   E LK+ L+L   + +RFL N  + I G      F ET+E + IMG + +E   +++V+
Sbjct:  281 VRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVV 359

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Match: MYH10 (myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568])

HSP 1 Score: 55.8398 bits (133), Expect = 1.679e-7
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            +RQ+  ER F+IFYQLLS   E LK+ L+L   + +RFL N  + I G      F ET+E + IMG + +E   +++V+
Sbjct:  272 VRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVV 350

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Celegans
Match: nmy-1 (Non-muscle MYosin [Source:UniProtKB/TrEMBL;Acc:Q20641])

HSP 1 Score: 53.9138 bits (128), Expect = 6.665e-8
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLL-STKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            V+RQ+  ER F+IFYQ+L    ++ K+  +L  +  +RFL N  +++  +   Q F+ TI  ++IMG  D E   I+RV+
Sbjct:  278 VLRQAQDERSFHIFYQILRGCSAKEKSEYLLEGVDNYRFLVNRGITLPNVDDVQEFHSTINSMRIMGFADDEISSIMRVV 357

HSP 2 Score: 21.557 bits (44), Expect = 6.665e-8
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEF 268
            +S+V+L+GN+EF
Sbjct:  357 VSAVLLLGNLEF 368

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Celegans
Match: nmy-2 (Non-muscle MYosin [Source:UniProtKB/TrEMBL;Acc:G5EBY3])

HSP 1 Score: 50.447 bits (119), Expect = 6.208e-7
Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLS--TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            V++Q+  ER F+IFYQLL   +K + ++ L+   +S ++F+ N    ++G+       ET+  + IMG+ D+E   I+RV+
Sbjct:  282 VLKQAPNERSFHIFYQLLKGLSKVQREHYLLEDSLSKYKFVSNGDSKLAGVDDGAEMKETLNAMSIMGLNDEEIGGILRVV 362

HSP 2 Score: 21.9422 bits (45), Expect = 6.208e-7
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2

Query:  233 LSSVMLMGNMEF 268
            +S+VML GN+EF
Sbjct:  362 VSAVMLFGNLEF 373

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Match: zip (gene:FBgn0265434 transcript:FBtr0100467)

HSP 1 Score: 51.2174 bits (121), Expect = 2.140e-6
Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL+  + E +   +L ++ ++ FL N ++ + G+     F  T++ + IMG+T ++   I R++
Sbjct:  323 IRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIV 401

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Match: zip (gene:FBgn0265434 transcript:FBtr0306576)

HSP 1 Score: 51.2174 bits (121), Expect = 2.141e-6
Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL+  + E +   +L ++ ++ FL N ++ + G+     F  T++ + IMG+T ++   I R++
Sbjct:  331 IRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIV 409

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Match: zip (gene:FBgn0265434 transcript:FBtr0302572)

HSP 1 Score: 51.2174 bits (121), Expect = 2.287e-6
Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL+  + E +   +L ++ ++ FL N ++ + G+     F  T++ + IMG+T ++   I R++
Sbjct:  278 IRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIV 356

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Match: zip (gene:FBgn0265434 transcript:FBtr0302574)

HSP 1 Score: 51.2174 bits (121), Expect = 2.287e-6
Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL+  + E +   +L ++ ++ FL N ++ + G+     F  T++ + IMG+T ++   I R++
Sbjct:  278 IRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIV 356

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Match: zip (gene:FBgn0265434 transcript:FBtr0100466)

HSP 1 Score: 51.2174 bits (121), Expect = 2.287e-6
Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL+  + E +   +L ++ ++ FL N ++ + G+     F  T++ + IMG+T ++   I R++
Sbjct:  278 IRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIV 356

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Match: myh14 (myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1])

HSP 1 Score: 62.003 bits (149), Expect = 1.132e-9
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLLS  +E ++  L+LG    +RFLC  ++ + G   ++ F +T++ + IMG T +E   +++VI
Sbjct:  288 IRQAKDERTFHIFYQLLSGATEAMRKELLLGGADQYRFLCGGSLPVPGQSDSENFTQTMDSMTIMGFTQEESTSMLKVI 366

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Match: myh14 (myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1])

HSP 1 Score: 62.003 bits (149), Expect = 1.141e-9
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLLS  +E ++  L+LG    +RFLC  ++ + G   ++ F +T++ + IMG T +E   +++VI
Sbjct:  288 IRQAKDERTFHIFYQLLSGATEAMRKELLLGGADQYRFLCGGSLPVPGQSDSENFTQTMDSMTIMGFTQEESTSMLKVI 366

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Match: myh9a (myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870])

HSP 1 Score: 58.5362 bits (140), Expect = 1.307e-8
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+   + L++ L L + + +RFL N  V+I G    + F ETI+  +IMGI + EQ  +++V+
Sbjct:  270 IRQAKDERAFHIFYYLLTGAGDKLRSELCLEDYNKYRFLSNGNVTIPGQQDRELFAETIDAFRIMGIPEDEQTGLLKVV 348

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Match: myh9a (myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870])

HSP 1 Score: 56.6102 bits (135), Expect = 6.042e-8
Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+    +L++ L L + + +RFL N  V+I G    + F ETI+  +IMGI + EQ  +++V+
Sbjct:  273 IRQAKDERAFHIFYYLLTGAGDKLRSELCLEDYNKYRFLSNGNVTIPGQQDRELFAETIDAFRIMGIPEDEQTGLLKVV 351

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Match: myh11a (myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1])

HSP 1 Score: 53.9138 bits (128), Expect = 1.810e-7
Identity = 28/79 (35.44%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY +++ TK +L+  L+L   + +RFL    V I G    + ++ET+E ++IMG + +E+  +++V+
Sbjct:  270 IRQAKTERAFHIFYYMVAGTKDKLREELLLENFNNYRFLSAGHVQIPGNQDDEMYDETMEAMEIMGFSVEERADVLKVV 348

HSP 2 Score: 21.1718 bits (43), Expect = 1.810e-7
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKT-RSQFQ 289
            +S+V+ +GN+EFK  R+Q Q
Sbjct:  348 VSTVLQLGNIEFKKERNQEQ 367

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Match: MYH9 (myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:100487997])

HSP 1 Score: 68.5514 bits (166), Expect = 1.681e-11
Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
             IRQ+  ER F+IFY LLS   E LK+ L+L   + +RFL N  V+I G      F ET+E +KIMG T++EQ  ++RV+
Sbjct:  268 AIRQAKEERTFHIFYYLLSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQQDKDLFQETMEAMKIMGFTEEEQIGLLRVV 347

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Match: MYH9 (myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:100487997])

HSP 1 Score: 63.5438 bits (153), Expect = 6.051e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK+ L+L   + +RFL N  V+I G      F ET+E +KIMG T++EQ  ++RV+
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQQDKDLFQETMEAMKIMGFTEEEQIGLLRVV 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Match: MYH9 (myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:100487997])

HSP 1 Score: 63.5438 bits (153), Expect = 6.386e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK+ L+L   + +RFL N  V+I G      F ET+E +KIMG T++EQ  ++RV+
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQQDKDLFQETMEAMKIMGFTEEEQIGLLRVV 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Match: MYH9 (myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:100487997])

HSP 1 Score: 63.5438 bits (153), Expect = 6.391e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK+ L+L   + +RFL N  V+I G      F ET+E +KIMG T++EQ  ++RV+
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQQDKDLFQETMEAMKIMGFTEEEQIGLLRVV 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Match: MYH9 (myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:100487997])

HSP 1 Score: 63.1586 bits (152), Expect = 6.507e-10
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK+ L+L   + +RFL N  V+I G      F ET+E +KIMG T++EQ  ++RV+
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQQDKDLFQETMEAMKIMGFTEEEQIGLLRVV 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Match: Myh9 (myosin, heavy polypeptide 9, non-muscle [Source:MGI Symbol;Acc:MGI:107717])

HSP 1 Score: 62.3882 bits (150), Expect = 9.303e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI + EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEDEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Match: Myh11 (myosin, heavy polypeptide 11, smooth muscle [Source:MGI Symbol;Acc:MGI:102643])

HSP 1 Score: 56.6102 bits (135), Expect = 7.050e-8
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+  K ++K+ L+L   +++ FL N  V I      + F ET+E + IMG  ++EQ  I++V+
Sbjct:  272 IRQARDERTFHIFYYLLAGAKEKMKSDLLLESFNSYTFLSNGFVPIPAAQDDEMFQETLEAMSIMGFNEEEQLAILKVV 350

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Match: Myh11 (myosin, heavy polypeptide 11, smooth muscle [Source:MGI Symbol;Acc:MGI:102643])

HSP 1 Score: 56.6102 bits (135), Expect = 7.053e-8
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+  K ++K+ L+L   +++ FL N  V I      + F ET+E + IMG  ++EQ  I++V+
Sbjct:  279 IRQARDERTFHIFYYLLAGAKEKMKSDLLLESFNSYTFLSNGFVPIPAAQDDEMFQETLEAMSIMGFNEEEQLAILKVV 357

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Match: Myh11 (myosin, heavy polypeptide 11, smooth muscle [Source:MGI Symbol;Acc:MGI:102643])

HSP 1 Score: 56.225 bits (134), Expect = 8.076e-8
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+  K ++K+ L+L   +++ FL N  V I      + F ET+E + IMG  ++EQ  I++V+
Sbjct:  272 IRQARDERTFHIFYYLLAGAKEKMKSDLLLESFNSYTFLSNGFVPIPAAQDDEMFQETLEAMSIMGFNEEEQLAILKVV 350

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Match: Myh10 (myosin, heavy polypeptide 10, non-muscle [Source:MGI Symbol;Acc:MGI:1930780])

HSP 1 Score: 55.8398 bits (133), Expect = 9.555e-8
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            +RQ+  ER F+IFYQLLS   E LK+ L+L   + +RFL N  + I G      F ET+E + IMG + +E   +++V+
Sbjct:  309 VRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFLSNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVV 387

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Match: sp|P35579|MYH9_HUMAN (Myosin-9 OS=Homo sapiens OX=9606 GN=MYH9 PE=1 SV=4)

HSP 1 Score: 63.1586 bits (152), Expect = 3.939e-9
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI ++EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEEEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Match: sp|Q258K2|MYH9_CANLF (Myosin-9 OS=Canis lupus familiaris OX=9615 GN=MYH9 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.008e-9
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI ++EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEEEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Match: sp|P14105|MYH9_CHICK (Myosin-9 OS=Gallus gallus OX=9031 GN=MYH9 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.473e-9
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI D+EQ  +++VI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPDEEQIGLLKVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Match: sp|Q62812|MYH9_RAT (Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3)

HSP 1 Score: 62.7734 bits (151), Expect = 5.766e-9
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI + EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEDEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Match: sp|Q8VDD5|MYH9_MOUSE (Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4)

HSP 1 Score: 62.3882 bits (150), Expect = 6.508e-9
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LLS   E LK  L+L   + +RFL N  V+I G      F ET+E ++IMGI + EQ  ++RVI
Sbjct:  265 IRQAKEERTFHIFYYLLSGAGEHLKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEDEQMGLLRVI 343

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Match: A0A0V0J4N1 (Myosin heavy chain, non-muscle (Fragment) OS=Schistocephalus solidus OX=70667 GN=MYSN PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.491e-11
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+  ER F+IFYQLLS+ +  LK TL++ E + F +L N  + +  +   QAF ET E + IMGITD EQ+ I R++
Sbjct:  244 VIRQAPDERTFHIFYQLLSSATPALKQTLLITEPTNFAYLSNGILEVPSLDEKQAFAETTEAMAIMGITDDEQQAIFRIL 323

HSP 2 Score: 23.8682 bits (50), Expect = 2.491e-11
Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            LS+V+ +GNMEFK
Sbjct:  323 LSAVLHLGNMEFK 335

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Match: A0A0X3NYF6 (Myosin heavy chain, non-muscle (Fragment) OS=Schistocephalus solidus OX=70667 GN=MYSN PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.492e-11
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+  ER F+IFYQLLS+ +  LK TL++ E + F +L N  + +  +   QAF ET E + IMGITD EQ+ I R++
Sbjct:  244 VIRQAPDERTFHIFYQLLSSATPALKQTLLITEPTNFAYLSNGILEVPSLDEKQAFAETTEAMAIMGITDDEQQAIFRIL 323

HSP 2 Score: 23.8682 bits (50), Expect = 2.492e-11
Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            LS+V+ +GNMEFK
Sbjct:  323 LSAVLHLGNMEFK 335

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Match: Q5C0P5 (SJCHGC07125 protein (Fragment) OS=Schistosoma japonicum OX=6182 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.336e-11
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+S ER F+IFYQLL++ +  ++  L+L   S++RFL N  + + G+   Q F ET + + IMGI +++Q  I RVI
Sbjct:   10 VIRQASDERSFHIFYQLLASATPAMQQQLLLNHASSYRFLSNGMIELPGVDEQQFFRETTDAMDIMGINNEDQNAIFRVI 89

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Match: A0MP08 (Myosin-2a (Fragment) OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.503e-10
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
             IRQ+  ER F+IFY L+S   E LK+ L+L   + +RFL N  V+I G +    F ET+E +KIMG TD+EQ  ++RV+
Sbjct:   70 AIRQAKDERTFHIFYYLMSGAGEHLKSDLLLEAYNKYRFLSNGHVTIPGQLDKDLFQETMEAMKIMGFTDEEQTGLLRVV 149

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Match: A0A183T9Y1 (Myosin heavy chain, non-muscle OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS13279 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.585e-10
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKS-ELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+  ER F+IFYQLLS+ +  LK TL++ E + F +L N  + +  +   QAF ET E ++IMGITD EQ+ I R++
Sbjct:  285 VIRQAPDERTFHIFYQLLSSATPALKQTLLITEPTNFAYLSNGILEVPSLDEKQAFAETTEAMEIMGITDDEQQAIFRIL 364

HSP 2 Score: 23.8682 bits (50), Expect = 1.585e-10
Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            LS+V+ +GNMEFK
Sbjct:  364 LSAVLHLGNMEFK 376

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Match: myh14 (myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1])

HSP 1 Score: 59.3066 bits (142), Expect = 6.790e-9
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQLL   S+ +K  L+LG    +RFLC  ++ + G   A  F +T++ + IMG T +E   +++VI
Sbjct:  285 IRQAKDERTFHIFYQLLCGASDAMKGELLLGGADQYRFLCGGSIPVPGQSDADNFIQTMDSMSIMGFTPEECTSMLKVI 363

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Match: myh9a (myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870])

HSP 1 Score: 56.6102 bits (135), Expect = 1.558e-8
Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F++FY LLS   + L++ L L + S +RFL N  V+I G      F ET++  KIM I + EQ  +++VI
Sbjct:  263 IRQAKEERTFHMFYYLLSGAGDKLRSELCLEDYSKYRFLSNGKVTIPGQQDRDLFTETLDAFKIMSIPEDEQTGLLKVI 341

HSP 2 Score: 21.557 bits (44), Expect = 1.558e-8
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            +SSV+ +GNM FK
Sbjct:  341 ISSVLQLGNMSFK 353

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Match: myh11a (myosin-11-like [Source:NCBI gene;Acc:103025732])

HSP 1 Score: 54.6842 bits (130), Expect = 9.357e-8
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY +++  K +L+  L+L   + +RFL    V I G    + + ET+E + IMG++D+E+  I++V+
Sbjct:  273 IRQAKTERAFHIFYYMVAGAKDKLREELLLESFNNYRFLMAGHVQIPGNQDDEMYEETMEAMNIMGLSDEERIGILKVV 351

HSP 2 Score: 21.1718 bits (43), Expect = 9.357e-8
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKT-RSQFQ 289
            +S+V+ +GN+EFK  R+Q Q
Sbjct:  351 VSTVLQLGNIEFKKERNQEQ 370

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Match: myh11a (myosin-11-like [Source:NCBI gene;Acc:103025732])

HSP 1 Score: 54.299 bits (129), Expect = 1.168e-7
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY +++  K +L+  L+L   + +RFL    V I G    + + ET+E + IMG++D+E+  I++V+
Sbjct:  279 IRQAKTERAFHIFYYMVAGAKDKLREELLLESFNNYRFLMAGHVQIPGNQDDEMYEETMEAMNIMGLSDEERIGILKVV 357

HSP 2 Score: 21.1718 bits (43), Expect = 1.168e-7
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKT-RSQFQ 289
            +S+V+ +GN+EFK  R+Q Q
Sbjct:  357 VSTVLQLGNIEFKKERNQEQ 376

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Match: myh11a (myosin-11-like [Source:NCBI gene;Acc:103025732])

HSP 1 Score: 54.299 bits (129), Expect = 1.287e-7
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY +++  K +L+  L+L   + +RFL    V I G    + + ET+E + IMG++D+E+  I++V+
Sbjct:  279 IRQAKTERAFHIFYYMVAGAKDKLREELLLESFNNYRFLMAGHVQIPGNQDDEMYEETMEAMNIMGLSDEERIGILKVV 357

HSP 2 Score: 21.1718 bits (43), Expect = 1.287e-7
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKT-RSQFQ 289
            +S+V+ +GN+EFK  R+Q Q
Sbjct:  357 VSTVLQLGNIEFKKERNQEQ 376

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010634.1 (pep scaffold:Pmarinus_7.0:GL481212:2267:20773:1 gene:ENSPMAG00000009630.1 transcript:ENSPMAT00000010634.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.3958 bits (163), Expect = 2.334e-12
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
             IRQ+  ER F+IFYQLL+  +E L+  L+L   S +RFL N  V I G      F ET+E L+IMG   +EQ  ++RV+
Sbjct:   67 AIRQAKDERAFHIFYQLLTGATEHLRTELLLEGFSNYRFLSNGYVPIPGQQDKDNFQETMESLRIMGFAHEEQMALLRVV 146

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Sea Lamprey
Match: myh10 (myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162])

HSP 1 Score: 62.7734 bits (151), Expect = 1.062e-10
Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE-LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
             IRQ+  ER F+IFYQLLS   E LK  L+L   + +RFL N  V I G      F ET   + IMG T +EQ  ++RV+
Sbjct:  277 AIRQAKDERTFHIFYQLLSGAGEHLKTDLLLEGYNNYRFLSNGNVVIPGQQDKDNFQETTSSMNIMGFTHEEQISLLRVV 356

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Match: myh9b (myosin heavy chain 9 [Source:NCBI gene;Acc:101164562])

HSP 1 Score: 56.225 bits (134), Expect = 6.474e-8
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+    +L+  L+L   + +RFL N  V+I G      FNET++  KIM I ++EQ  +++V+
Sbjct:  263 IRQAKEERTFHIFYYLLTGAGDKLRKELLLENYNNYRFLSNGNVTIPGQQDKDLFNETMDAFKIMSIPEEEQIGMLKVV 341

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Match: myh9b (myosin heavy chain 9 [Source:NCBI gene;Acc:101164562])

HSP 1 Score: 56.225 bits (134), Expect = 6.590e-8
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLLS-TKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFY LL+    +L+  L+L   + +RFL N  V+I G      FNET++  KIM I ++EQ  +++V+
Sbjct:  270 IRQAKEERTFHIFYYLLTGAGDKLRKELLLENYNNYRFLSNGNVTIPGQQDKDLFNETMDAFKIMSIPEEEQIGMLKVV 348

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Match: myh14 (myosin-10 [Source:NCBI gene;Acc:101160019])

HSP 1 Score: 53.9138 bits (128), Expect = 3.696e-7
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 1

Query:    4 IRQSSIER*FNIFYQLL-STKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            IRQ+  ER F+IFYQ+L     E +  L+LG    +RFL   ++ + G   ++ F +T++ + IMG T +E   +++VI
Sbjct:  286 IRQAKDERTFHIFYQMLCGATEETRAELLLGNADEYRFLTGGSIPVPGQSDSENFTQTMDSMAIMGFTAEESISMLKVI 364

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Match: myo1b (myosin IB [Source:NCBI gene;Acc:101175446])

HSP 1 Score: 48.9062 bits (115), Expect = 7.038e-6
Identity = 25/81 (30.86%), Postives = 48/81 (59.26%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE--LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            V++Q   ER F++FYQLLS  S+  LK   +  ++S + +LC  + S+SG+  A  F      ++I+G  + E + +++++
Sbjct:  192 VVKQPRGERNFHVFYQLLSGASDETLKKLKLDRDVSKYNYLCLDSASVSGVDDAANFRTVRNAMQIVGFMEDEVQSVLQLV 272

HSP 2 Score: 20.4014 bits (41), Expect = 7.038e-6
Identity = 7/17 (41.18%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKTRSQ 283
            +++V+ +GN+EFK  S+
Sbjct:  272 VAAVLKLGNIEFKPESR 288

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Match: myo1b (myosin IB [Source:NCBI gene;Acc:101175446])

HSP 1 Score: 48.9062 bits (115), Expect = 7.152e-6
Identity = 25/81 (30.86%), Postives = 48/81 (59.26%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSE--LKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            V++Q   ER F++FYQLLS  S+  LK   +  ++S + +LC  + S+SG+  A  F      ++I+G  + E + +++++
Sbjct:  192 VVKQPRGERNFHVFYQLLSGASDETLKKLKLDRDVSKYNYLCLDSASVSGVDDAANFRTVRNAMQIVGFMEDEVQSVLQLV 272

HSP 2 Score: 20.4014 bits (41), Expect = 7.152e-6
Identity = 7/17 (41.18%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  233 LSSVMLMGNMEFKTRSQ 283
            +++V+ +GN+EFK  S+
Sbjct:  272 VAAVLKLGNIEFKPESR 288

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Match: SMESG000049494.1 (SMESG000049494.1)

HSP 1 Score: 129.028 bits (323), Expect = 5.303e-32
Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+S ER F+IFYQLLSTKSE+KNTL+LGEMS +RFLCN A SISGI   QAFNETIE LKIMGITD+EQE I RVI
Sbjct:  285 VIRQASEERSFHIFYQLLSTKSEMKNTLLLGEMSGYRFLCNGAASISGIDEVQAFNETIEALKIMGITDEEQECIFRVI 363

HSP 2 Score: 28.4906 bits (62), Expect = 5.303e-32
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            +SSVMLMGNMEFK
Sbjct:  363 ISSVMLMGNMEFK 375

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Match: SMESG000049494.1 (SMESG000049494.1)

HSP 1 Score: 129.028 bits (323), Expect = 5.481e-32
Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+S ER F+IFYQLLSTKSE+KNTL+LGEMS +RFLCN A SISGI   QAFNETIE LKIMGITD+EQE I RVI
Sbjct:  279 VIRQASEERSFHIFYQLLSTKSEMKNTLLLGEMSGYRFLCNGAASISGIDEVQAFNETIEALKIMGITDEEQECIFRVI 357

HSP 2 Score: 28.1054 bits (61), Expect = 5.481e-32
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            +SSVMLMGNMEFK
Sbjct:  357 ISSVMLMGNMEFK 369

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Match: SMESG000049494.1 (SMESG000049494.1)

HSP 1 Score: 129.028 bits (323), Expect = 5.482e-32
Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+S ER F+IFYQLLSTKSE+KNTL+LGEMS +RFLCN A SISGI   QAFNETIE LKIMGITD+EQE I RVI
Sbjct:  279 VIRQASEERSFHIFYQLLSTKSEMKNTLLLGEMSGYRFLCNGAASISGIDEVQAFNETIEALKIMGITDEEQECIFRVI 357

HSP 2 Score: 28.1054 bits (61), Expect = 5.482e-32
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            +SSVMLMGNMEFK
Sbjct:  357 ISSVMLMGNMEFK 369

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Match: SMESG000049494.1 (SMESG000049494.1)

HSP 1 Score: 129.028 bits (323), Expect = 5.712e-32
Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLLSTKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVI 237
            VIRQ+S ER F+IFYQLLSTKSE+KNTL+LGEMS +RFLCN A SISGI   QAFNETIE LKIMGITD+EQE I RVI
Sbjct:  279 VIRQASEERSFHIFYQLLSTKSEMKNTLLLGEMSGYRFLCNGAASISGIDEVQAFNETIEALKIMGITDEEQECIFRVI 357

HSP 2 Score: 28.1054 bits (61), Expect = 5.712e-32
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  233 LSSVMLMGNMEFK 271
            +SSVMLMGNMEFK
Sbjct:  357 ISSVMLMGNMEFK 369

[Close]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Match: SMESG000062420.1 (SMESG000062420.1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.140e-12
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1

Query:    1 VIRQSSIER*FNIFYQLL-STKSELKNTLMLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRVIIC 243
            VIRQ++ ER F++FYQLL      LK  L+L  +S ++ L N  +++      Q F +T+E L IMGI+  EQE I RVI  
Sbjct:  280 VIRQAANERCFHVFYQLLLGADDRLKKELILENVSTYKLLSNGMIAVPDYDEKQMFKDTVEALDIMGISKDEQESIFRVIAA 361

The following BLAST results are available for this feature:

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Celegans
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Sea Lamprey
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Yeast
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Nematostella
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
MYH9	8.202e-10	46.84	myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:...	[more]
MYH11	9.025e-8	35.00	myosin heavy chain 11 [Source:HGNC Symbol;Acc:HGNC...	[more]
MYH10	1.570e-7	40.51	myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC...	[more]
MYH10	1.623e-7	40.51	myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC...	[more]
MYH10	1.679e-7	40.51	myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
nmy-1	6.665e-8	36.25	Non-muscle MYosin [Source:UniProtKB/TrEMBL;Acc:Q2...	[more]
nmy-2	6.208e-7	33.33	Non-muscle MYosin [Source:UniProtKB/TrEMBL;Acc:G5...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
zip	2.140e-6	32.91	gene:FBgn0265434 transcript:FBtr0100467	[more]
zip	2.141e-6	32.91	gene:FBgn0265434 transcript:FBtr0306576	[more]
zip	2.287e-6	32.91	gene:FBgn0265434 transcript:FBtr0302572	[more]
zip	2.287e-6	32.91	gene:FBgn0265434 transcript:FBtr0302574	[more]
zip	2.287e-6	32.91	gene:FBgn0265434 transcript:FBtr0100466	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
myh14	1.132e-9	39.24	myosin, heavy chain 14, non-muscle [Source:ZFIN;Ac...	[more]
myh14	1.141e-9	39.24	myosin, heavy chain 14, non-muscle [Source:ZFIN;Ac...	[more]
myh9a	1.307e-8	40.51	myosin, heavy chain 9a, non-muscle [Source:ZFIN;Ac...	[more]
myh9a	6.042e-8	40.51	myosin, heavy chain 9a, non-muscle [Source:ZFIN;Ac...	[more]
myh11a	1.810e-7	35.44	myosin, heavy chain 11a, smooth muscle [Source:ZFI...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
MYH9	1.681e-11	46.25	myosin, heavy chain 9, non-muscle [Source:NCBI gen...	[more]
MYH9	6.051e-10	46.84	myosin, heavy chain 9, non-muscle [Source:NCBI gen...	[more]
MYH9	6.386e-10	46.84	myosin, heavy chain 9, non-muscle [Source:NCBI gen...	[more]
MYH9	6.391e-10	46.84	myosin, heavy chain 9, non-muscle [Source:NCBI gen...	[more]
MYH9	6.507e-10	46.84	myosin, heavy chain 9, non-muscle [Source:NCBI gen...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Myh9	9.303e-10	46.84	myosin, heavy polypeptide 9, non-muscle [Source:MG...	[more]
Myh11	7.050e-8	39.24	myosin, heavy polypeptide 11, smooth muscle [Sourc...	[more]
Myh11	7.053e-8	39.24	myosin, heavy polypeptide 11, smooth muscle [Sourc...	[more]
Myh11	8.076e-8	39.24	myosin, heavy polypeptide 11, smooth muscle [Sourc...	[more]
Myh10	9.555e-8	40.51	myosin, heavy polypeptide 10, non-muscle [Source:M...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P35579\|MYH9_HUMAN	3.939e-9	46.84	Myosin-9 OS=Homo sapiens OX=9606 GN=MYH9 PE=1 SV=4	[more]
sp\|Q258K2\|MYH9_CANLF	4.008e-9	46.84	Myosin-9 OS=Canis lupus familiaris OX=9615 GN=MYH9...	[more]
sp\|P14105\|MYH9_CHICK	5.473e-9	46.84	Myosin-9 OS=Gallus gallus OX=9031 GN=MYH9 PE=2 SV=...	[more]
sp\|Q62812\|MYH9_RAT	5.766e-9	46.84	Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=...	[more]
sp\|Q8VDD5\|MYH9_MOUSE	6.508e-9	46.84	Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0V0J4N1	2.491e-11	47.50	Myosin heavy chain, non-muscle (Fragment) OS=Schis...	[more]
A0A0X3NYF6	2.492e-11	47.50	Myosin heavy chain, non-muscle (Fragment) OS=Schis...	[more]
Q5C0P5	4.336e-11	43.75	SJCHGC07125 protein (Fragment) OS=Schistosoma japo...	[more]
A0MP08	1.503e-10	46.25	Myosin-2a (Fragment) OS=Xenopus laevis OX=8355 PE=...	[more]
A0A183T9Y1	1.585e-10	47.50	Myosin heavy chain, non-muscle OS=Schistocephalus ...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
myh14	6.790e-9	40.51	myosin, heavy chain 14, non-muscle [Source:ZFIN;Ac...	[more]
myh9a	1.558e-8	41.77	myosin, heavy chain 9a, non-muscle [Source:ZFIN;Ac...	[more]
myh11a	9.357e-8	36.71	myosin-11-like [Source:NCBI gene;Acc:103025732]	[more]
myh11a	1.168e-7	36.71	myosin-11-like [Source:NCBI gene;Acc:103025732]	[more]
myh11a	1.287e-7	36.71	myosin-11-like [Source:NCBI gene;Acc:103025732]	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSPMAT00000010634.1	2.334e-12	45.00	pep scaffold:Pmarinus_7.0:GL481212:2267:20773:1 ge...	[more]
myh10	1.062e-10	45.00	myosin, heavy chain 10, non-muscle [Source:ZFIN;Ac...	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
myh9b	6.474e-8	40.51	myosin heavy chain 9 [Source:NCBI gene;Acc:1011645...	[more]
myh9b	6.590e-8	40.51	myosin heavy chain 9 [Source:NCBI gene;Acc:1011645...	[more]
myh14	3.696e-7	35.44	myosin-10 [Source:NCBI gene;Acc:101160019]	[more]
myo1b	7.038e-6	30.86	myosin IB [Source:NCBI gene;Acc:101175446]	[more]
myo1b	7.152e-6	30.86	myosin IB [Source:NCBI gene;Acc:101175446]	[more]

BLAST of Myosin, heavy chain 11a, smooth muscle vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000049494.1	5.303e-32	78.48	SMESG000049494.1	[more]
SMESG000049494.1	5.481e-32	78.48	SMESG000049494.1	[more]
SMESG000049494.1	5.482e-32	78.48	SMESG000049494.1	[more]
SMESG000049494.1	5.712e-32	78.48	SMESG000049494.1	[more]
SMESG000062420.1	8.140e-12	42.68	SMESG000062420.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30021763 ID=SMED30021763|Name=Myosin, heavy chain 11a, smooth muscle|organism=Schmidtea mediterranea sexual|type=transcript|length=1403bp
GTTATTCGGCAATCGTCTATAGAAAGATAATTTAATATTTTCTATCAGCT
ACTTTCAACAAAATCTGAGTTGAAAAATACTTTAATGCTCGGTGAAATGT
CTGCTTTCAGATTTCTTTGCAATGCTGCTGTATCGATTTCTGGCATTGTT
GTGGCGCAAGCATTCAATGAAACTATAGAAGTGCTGAAGATTATGGGAAT
CACTGATAAAGAGCAAGAATACATAATTCGAGTTATCATCTGTAATGCTA
ATGGGCAATATGGAGTTCAAAACAAGATCACAATTCCAATATCGAAGTTG
CACAAGCTGAAAAGAGTGAATCGGACGATTCTTCCTCTGAAAAAGATTAT
TTCAATGATTATTTCTGTCAAAACGATATCATATTCTTTGATGTGGATGA
ACAATGCTTCGTTTTAATGTTCTTATGAAGAAATGGCAAATGTGTCTGCA
CATTACTTCCATTATCCAAGTGACAAGATTCAATTCTATATATCACAGCC
TGGCTTCTCGAATAAAGAGTATTCTAGAAATAAATGTCAAAGACGAATTT
ATTATAAGAAGCGTTCTATTCTAGTCAGAGTTGGAAAACATGTGTCAGGC
CAATTGCCTTTATTTTTATTCTGGCAATCTCAACCATTCAGCTTTAATCA
AAGATCTCATCAATGCTATCTCAAAGCAAATCAGTATTTATCAAAACAAC
ATTACCTTCCATATTCTTCCATCGAAACAACATTTGAAAATCGATGGAAG
TTCGCATTTTGCTCTTTTGTACCTTAAATCTGGACATTGGCAAATCGAAT
TGGATAAAGAAAGCAAACTATATATAGATAAAAAAACAGCTGTGATATTT
TGGACAAAAATGGTTCAAAATTGAAAGGATACCATTGAAATCTATTGGAC
AATTCATTTGGAGATTCATTTTAGGAAGAAACTTTACAATAAAGCCCGAC
CACAAGTTACTTGAACTTTTTTAATAACCAATCGTTACCAAAATTTATAT
CGTCAAGAATAGCCAGGTGGGCAACTGAAATCATGGGATATTGTCGGTCT
ATTAATACAACATTTGGATGCGTTATCCAAACTTTAATACAATGAAATGA
TATTCAATACCAATGAAGAAACTACAGAATCAAAGTAGTTCCATCCCGGA
AAATTTATATCCGATACAGAAGCAGAAAAAATAACAACAATTTAAGAAAA
ATAAATTATTTAATTATCACAGGTAACTGGACTAACTGCTCCAAGAATGT
TTTTGCAACGCATAAAGGACTGTTTACAATCAAACACAATTGAATTTACA
GAAACCTGTGTTCATGAATTATTGATAGAACCATACTGTTAAACAAGCGT
GCAAAACAGAAACGAGTCTAAACCATAAAATGAACAAGATATGTACTACT
ATA

protein sequence of SMED30021763-orf-1

>SMED30021763-orf-1 ID=SMED30021763-orf-1|Name=SMED30021763-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=111bp
MLGEMSAFRFLCNAAVSISGIVVAQAFNETIEVLKIMGITDKEQEYIIRV
IICNANGQYGVQNKITIPISKLHKLKRVNRTILPLKKIISMIISVKTISY
SLMWMNNASF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000074	oocyte
PLANA:0000231	vitelline gland
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR001609	Myosin_head_motor_dom
IPR027417	P-loop_NTPase

Vocabulary: **molecular function**
Term	Definition
GO:0005524	ATP binding
GO:0003774	motor activity
GO:0000166	nucleotide binding
GO:0003779	actin binding
GO:0051015	actin filament binding

Vocabulary: **cellular component**
Term	Definition
GO:0016459	myosin complex

Main menu

Myosin, heavy chain 11a, smooth muscle

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 6

Owlery

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