Nicotinic acetylcholine receptor alpha 6 subunit
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30021693 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Match: CHRNA7 (cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960]) HSP 1 Score: 322.013 bits (824), Expect = 8.961e-103 Identity = 194/500 (38.80%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Match: AC243734.1 (cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:1139]) HSP 1 Score: 322.013 bits (824), Expect = 8.961e-103 Identity = 194/500 (38.80%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Match: CHRNA7 (cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960]) HSP 1 Score: 322.398 bits (825), Expect = 1.604e-102 Identity = 194/500 (38.80%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 52 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 522
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Match: AC254952.1 (cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:1139]) HSP 1 Score: 318.931 bits (816), Expect = 1.507e-101 Identity = 192/500 (38.40%), Postives = 285/500 (57.00%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVD+K Q++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDQKRQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Match: AC254952.1 (cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:1139]) HSP 1 Score: 318.931 bits (816), Expect = 1.507e-101 Identity = 192/500 (38.40%), Postives = 285/500 (57.00%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVD+K Q++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDQKRQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Match: acr-16 (Acetylcholine receptor subunit alpha-type acr-16 [Source:UniProtKB/Swiss-Prot;Acc:P48180]) HSP 1 Score: 275.018 bits (702), Expect = 4.440e-85 Identity = 173/494 (35.02%), Postives = 266/494 (53.85%), Query Frame = 1 Query: 229 EKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPD---SICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTH-NIY---QDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 E+RL + L +N LERPV N S PV V L QIIDVDEKNQ++ + WL WNDY+ W+ +EYG IT + +W PDVLLYNS D NF++ +++ G + +VPPG+FK +C +D+ WFPFD Q C KFG+W+YDG ++L+ G ++ Y +GEW L + + R + Y CC + DV + + RR YY FN ++PCI+ + + LL F LP DAGEKI+L +T++LS+ F ++++ P +S ++PLL ++F M++ T S +FTV VLN H+ H + + R ++ W+ +L + P + ++ + S KP + I N K + L+ +D N Y Q + SL +++ + NG +V L LH ++ +L+ +T ++ E D+E WKFAA V+DR C+ +FT+ T GIF+SA Sbjct: 23 ERRLYEDLMR-----NYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDLQ-------------PATGGFDISEYISNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFSTKPNRHSESLIRNIKDNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSLGSIPSTMISS-NGTTTDVSQQATLLILH----RIYHELKIVTKRMIEGDKEEQACNNWKFAAMVVDRLCLYVFTIFIIVSTIGIFWSA 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Match: acr-19 (AcetylCholine Receptor [Source:UniProtKB/TrEMBL;Acc:B3WFZ2]) HSP 1 Score: 261.151 bits (666), Expect = 2.726e-79 Identity = 173/555 (31.17%), Postives = 287/555 (51.71%), Query Frame = 1 Query: 199 FFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDHK----VPRFIRVIINQWLAKVLFITPPDSI---------CTISTKASKKPPVIIDKTIYN--SKVSHSLLANVLELSSDTHNIYQDLFK-----KRKSLS----------EFETSVDDAVNG-DCQNVE---DSGMLCSLHED---------------------------LKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 FR + G +E+RL L + +N L RPV+NES V VL G QI+D+DEK+QI+ +++WL + W D++ W+PSE+G I + + N +W PDVLLYNS D F++ V V+ Y G+++++PP + +S+C +D+ +FPFD Q+CT+KFG+W+Y G +L + Y +GEWEL+ +R++ Y CC + DV T+ I RR YY FN +LPC++IS++ALL F LP+D GEK++LGVTI +SL +F +++A+ MPQ+S +LPL+ +YF +M S++ TVI LN HH + + +F++ ++ WL +L + PD + + + K ++ + +++ I + HS + + L T N + D K KR S S + ++D ++N C V ++G H+ + +L I+ ++++ + +W FA+ V+DR C + F+ F T I ++A Sbjct: 15 LFRVIWTGDHERRLYAKL-----AENYNKLARPVRNESEAVVVLLGMDYQQILDIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDL---------------INTTISPATYKPNGEWELLGLTSQRSIFFYECCPEPYYDVTFTVSIRRRTLYYGFNLLLPCMLISSLALLSFTLPADCGEKLNLGVTIFMSLCVFMIMVAEAMPQTSDALPLIQIYFSCIMFQVGASVVATVIALNFHHRSPEQYKPMNKFLKTLLLGWLPTLLGMERPDVLELSVHGAHYASDNKKKQRQYLIEVERHILTRPNGNGHSAVDKAVHLDLSTGNPHSDAKKSSPSPKRTSASIMGMTGLPTTQMNGALDSSINKYTCTKVTRPLENGSATINHKSSPQINPINNNNIYKCANNQKTQFEDRHFHHILNELRVISARVRKEEAMHALQADWMFASRVVDRVCFLAFSAFLFMCTAIISYNA 549
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Match: acr-19 (AcetylCholine Receptor [Source:UniProtKB/TrEMBL;Acc:B3WFZ2]) HSP 1 Score: 258.84 bits (660), Expect = 2.518e-78 Identity = 171/548 (31.20%), Postives = 284/548 (51.82%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDHK----VPRFIRVIINQWLAKVLFITPPDSI---------CTISTKASKKPPVIIDKTIYN--SKVSHSLLANVLELSSDTHNIYQDLFK-----KRKSLS----------EFETSVDDAVNG-DCQNVE---DSGMLCSLHED---------------------------LKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 G +E+RL L + +N L RPV+NES V VL G QI+D+DEK+QI+ +++WL + W D++ W+PSE+G I + + N +W PDVLLYNS D F++ V V+ Y G+++++PP + +S+C +D+ +FPFD Q+CT+KFG+W+Y G +L + Y +GEWEL+ +R++ Y CC + DV T+ I RR YY FN +LPC++IS++ALL F LP+D GEK++LGVTI +SL +F +++A+ MPQ+S +LPL+ +YF +M S++ TVI LN HH + + +F++ ++ WL +L + PD + + + K ++ + +++ I + HS + + L T N + D K KR S S + ++D ++N C V ++G H+ + +L I+ ++++ + +W FA+ V+DR C + F+ F T I ++A Sbjct: 28 GDHERRLYAKL-----AENYNKLARPVRNESEAVVVLLGMDYQQILDIDEKHQIMNSNVWLRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDL---------------INTTISPATYKPNGEWELLGLTSQRSIFFYECCPEPYYDVTFTVSIRRRTLYYGFNLLLPCMLISSLALLSFTLPADCGEKLNLGVTIFMSLCVFMIMVAEAMPQTSDALPLIQIYFSCIMFQVGASVVATVIALNFHHRSPEQYKPMNKFLKTLLLGWLPTLLGMERPDVLELSVHGAHYASDNKKKQRQYLIEVERHILTRPNGNGHSAVDKAVHLDLSTGNPHSDAKKSSPSPKRTSASIMGMTGLPTTQMNGALDSSINKYTCTKVTRPLENGSATINHKSSPQINPINNNNIYKCANNQKTQFEDRHFHHILNELRVISARVRKEEAMHALQADWMFASRVVDRVCFLAFSAFLFMCTAIISYNA 555
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Match: acr-25 (AcetylCholine Receptor [Source:UniProtKB/TrEMBL;Acc:Q65XS8]) HSP 1 Score: 254.603 bits (649), Expect = 7.833e-77 Identity = 165/520 (31.73%), Postives = 264/520 (50.77%), Query Frame = 1 Query: 268 VDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPP-------------DS-------------------ICTISTKASKKPP------VIIDKTIYNSKVSHSLLANVLELSSDTHNIYQD---LFKKRKSLSEFETSVD----DAVN--GDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFS 1677 ++ + PLERP++N S V V G L QI+DVDEKNQ++ + WL W DY W P +YGG+T + +W PDVL+YNSAD F++ + +++ +G ++++PPGL++ +C + V WFPFDVQ C LKFG+W++DG +NL+I ++ Y ++GEW L + ++R +Q Y CC + D+ T VI RR YY FN +LPCI+I+ + L+ F P DAGEK+SL +TIMLS+ +FQ +A+ P +S ++P L+ +F + + T + LN HH H++ R+++ +W+ +L + P DS I I+ +++K P I+D+ + + L + + D D ++ + S+ S +A N G+ VE L L ++V L I I+E ++ +WKF+A V+DR C++IFT F T +F S Sbjct: 34 LEDYEPLERPIENSSEAVMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQVVWFPFDVQECFLKFGSWTFDGTKLNLEID-------------DNGFDISNYMQNGEWTLEGTTVKRNIQYYQCCPEPYYDLVFTFVIRRRALYYAFNLILPCILITMLTLVGFTFPPDAGEKMSLQITIMLSICIFQNYVAELSPPTSEAVPFLSAFFAVCLFTCACCVTATTLALNFHHRTGKSHQMNNTFRLLMLEWIPWLLMMRRPGYVARCGKIVKQDDSEDEFEERQTRLDQQRIATIISQITVESNKPTPTFPRRVTIVDEVNSDGEAEEPLPPDEVIREEDDDVASMDDPPAWRSTTTTSQPPQSPAHLWWNATNRMGNRVPVEQIAQLLVL----QQVHGHLSEINKHIREREKSKKIEDDWKFSALVVDRICMVIFTSFLFGSTVALFAS 536
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Match: acr-11 (AcetylCholine Receptor [Source:UniProtKB/TrEMBL;Acc:P91197]) HSP 1 Score: 245.743 bits (626), Expect = 2.228e-74 Identity = 160/513 (31.19%), Postives = 274/513 (53.41%), Query Frame = 1 Query: 184 LSVILFFRDVNAGSY-EKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNT---VWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHH---NDHKVPRFIRVIINQWLAKVLFITPPD------SICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLK-EWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 LS+++ ++ GS E +L L + +NPLERPV+N S P+EV L QI+DVDEKNQI+ + WLS W D+ W P +YGGI I P + +W PDVLLYNSA +F++ ++ + G++ ++PPG+ K C +DVTWFPFD Q C +KFG+W++ G ++L+I + + + ++ Y +GEW++IS++ +R V Y CC + V + I RR YY FN ++P ++IS +A+L F+ P DAGEKI+L VTI+L++ F ++++ P +S ++PL+ ++F M++ + S++FT++VLN H + H++ +R ++ ++L +LF++ P ++ + K KKP +D + ++ + A +L +L S+H +L++V +E ++++ +W+FAA V+DR C+++FT+ I SA Sbjct: 10 LSLVIIHSNLCDGSVAETKLFTDL-----LKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIR-FPGSSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQVCEMKFGSWTFHGYAIDLQIDDDTNGTQSM--------DLSTYLVNGEWQVISTNAKRVVSYYKCCPEPYPTVNYYLHIRRRTLYYGFNLIIPSLLISLMAILGFMFPPDAGEKITLEVTILLAIVFFLSMVSEMTPPTSEAVPLIGVFFSCCMLVVSASVVFTIVVLNLHFRSADSHEMNPLVRRVLLEFLPWLLFMSRPGYKFVKANVIDSTDKMPKKPKNPLDCNLPSNHAGYE--AQIL------------------------------------------LLHSVHTELRRV--------VAFYNKEEHDERIQTDWRFAAMVVDRACLLLFTVFIVISILAIMMSA 456
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Match: nAChRalpha6 (gene:FBgn0032151 transcript:FBtr0079914) HSP 1 Score: 357.066 bits (915), Expect = 1.231e-116 Identity = 207/511 (40.51%), Postives = 321/511 (62.82%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVN-GDCQNVED--SGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 ++FL++I ++ G +EKRLL HL + +N LERPV NES P+EV FG TL QIIDVDEKNQ++ T++WLS+ WNDY+ WN +EYGG+ + + PN +W PDVL+YNSAD F+ +V+ ++GS YVPPG+FKSTC +D+TWFPFD Q+C +KFG+W+YDG ++L + + ++ + +GEW L++ ++ YACC ++D+ TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A+ +PQ S ++PLL YF +M + S++ TV+VLN HH H++P +I+ + QWL +L + P K ++K ++ ++ + S SLLANVL++ D R ++S +T++ + + G VE+ + + C+ H+DL + K+L+FIT ++++ D+E + + +WKFAA V+DRFC+I+FTL T + SA Sbjct: 15 LIFLAII---KESCQGPHEKRLLNHLLS-----TYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN------------SEDGGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP------GRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDF----------RHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN-HKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSA 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Match: nAChRalpha6 (gene:FBgn0032151 transcript:FBtr0303898) HSP 1 Score: 356.681 bits (914), Expect = 1.663e-116 Identity = 206/511 (40.31%), Postives = 322/511 (63.01%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVN-GDCQNVED--SGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 ++FL++I ++ G +EKRLL HL + +N LERPV NES P+EV FG TL QIIDVDEKNQ++ T++WLS+ WNDY+ WN +EYGG+ + + PN +W PDVL+YNSAD F+ +V+ ++GS YVPPG+FKSTC +D+TWFPFD Q+C +KFG+W+YDG ++L + + ++ + +GEW L++ ++ YACC ++D+ TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A++MP +S ++PL+ YF +M + S++ TV+VLN HH H++P +I+ + QWL +L + P K ++K ++ ++ + S SLLANVL++ D R ++S +T++ + + G VE+ + + C+ H+DL + K+L+FIT ++++ D+E + + +WKFAA V+DRFC+I+FTL T + SA Sbjct: 15 LIFLAII---KESCQGPHEKRLLNHLLS-----TYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN------------SEDGGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP------GRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDF----------RHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN-HKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSA 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Match: nAChRalpha6 (gene:FBgn0032151 transcript:FBtr0079916) HSP 1 Score: 356.681 bits (914), Expect = 1.663e-116 Identity = 206/511 (40.31%), Postives = 322/511 (63.01%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVN-GDCQNVED--SGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 ++FL++I ++ G +EKRLL HL + +N LERPV NES P+EV FG TL QIIDVDEKNQ++ T++WLS+ WNDY+ WN +EYGG+ + + PN +W PDVL+YNSAD F+ +V+ ++GS YVPPG+FKSTC +D+TWFPFD Q+C +KFG+W+YDG ++L + + ++ + +GEW L++ ++ YACC ++D+ TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A++MP +S ++PL+ YF +M + S++ TV+VLN HH H++P +I+ + QWL +L + P K ++K ++ ++ + S SLLANVL++ D R ++S +T++ + + G VE+ + + C+ H+DL + K+L+FIT ++++ D+E + + +WKFAA V+DRFC+I+FTL T + SA Sbjct: 15 LIFLAII---KESCQGPHEKRLLNHLLS-----TYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN------------SEDGGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP------GRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDF----------RHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN-HKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSA 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Match: nAChRalpha6 (gene:FBgn0032151 transcript:FBtr0079915) HSP 1 Score: 356.295 bits (913), Expect = 1.832e-116 Identity = 207/511 (40.51%), Postives = 320/511 (62.62%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVN-GDCQNVED--SGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 ++FL++I ++ G +EKRLL HL + +N LERPV NES P+EV FG TL QIIDVDEKNQI+ T+ WL++ WNDY+ WN +EYGG+ + + PN +W PDVL+YNSAD F+ +V+ ++GS YVPPG+FKSTC +D+TWFPFD Q+C +KFG+W+YDG ++L + + ++ + +GEW L++ ++ YACC ++D+ TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A+ +PQ S ++PLL YF +M + S++ TV+VLN HH H++P +I+ + QWL +L + P K ++K ++ ++ + S SLLANVL++ D R ++S +T++ + + G VE+ + + C+ H+DL + K+L+FIT ++++ D+E + + +WKFAA V+DRFC+I+FTL T + SA Sbjct: 15 LIFLAII---KESCQGPHEKRLLNHLLS-----TYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN------------SEDGGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP------GRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDF----------RHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN-HKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSA 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Match: nAChRalpha6 (gene:FBgn0032151 transcript:FBtr0331284) HSP 1 Score: 356.295 bits (913), Expect = 2.424e-116 Identity = 206/511 (40.31%), Postives = 321/511 (62.82%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVN-GDCQNVED--SGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 ++FL++I ++ G +EKRLL HL + +N LERPV NES P+EV FG TL QIIDVDEKNQI+ T+ WL++ WNDY+ WN +EYGG+ + + PN +W PDVL+YNSAD F+ +V+ ++GS YVPPG+FKSTC +D+TWFPFD Q+C +KFG+W+YDG ++L + + ++ + +GEW L++ ++ YACC ++D+ TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A++MP +S ++PL+ YF +M + S++ TV+VLN HH H++P +I+ + QWL +L + P K ++K ++ ++ + S SLLANVL++ D R ++S +T++ + + G VE+ + + C+ H+DL + K+L+FIT ++++ D+E + + +WKFAA V+DRFC+I+FTL T + SA Sbjct: 15 LIFLAII---KESCQGPHEKRLLNHLLS-----TYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN------------SEDGGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP------GRKITRKTILLSNRMKELELKERSSKSLLANVLDIDDDF----------RHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN-HKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSA 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Match: chrna7 (cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]) HSP 1 Score: 316.62 bits (810), Expect = 8.479e-101 Identity = 193/524 (36.83%), Postives = 294/524 (56.11%), Query Frame = 1 Query: 181 FLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYN--SKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV----------------NGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 F + +R G +++RL + L + +NPLERPV N++ + V F +L QI+DVDEKNQ++ T+IWL + W DY+ WN SEY G+T + + +W PD+LLYNSAD F+A V+++ G+ Y+PPG+FKSTC +DV WFPFD+Q C LKFG+W+Y G ++L++ + ++ Y +GEW+L+ RR + Y CC+ + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV VL H++D K+P++ RV++ W A L + P +K+P + N V+ S N+L + F+ ++ + TS D V +V SG +L K+ ++ +I+ + ++ DEE EWKFAA VIDR C++ F+L T GI SA F Sbjct: 10 FTTTCCLWRVSLQGEHQRRLYRDL-----MKDYNPLERPVFNDTHSLTVYFSMSLMQIMDVDEKNQVLTTNIWLQLYWYDYYLQWNASEYPGVTNVRFPDSQIWKPDILLYNSADERFDATFHTNVLVNSSGACQYLPPGIFKSTCYIDVRWFPFDLQRCDLKFGSWTYGGWSLDLQM---------------IDADITGYIANGEWDLVEVPGRRNERFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVWVLQYHYHDPEGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACHNKQPRSSLSSVDLNISPGVAQSTNGNLLYIG----------FRGMDTI-HYATSPDSGVICSRLVATGEEDVLLPGAQASSVSSSG---PGETELSKILDEVRYISKRFRDQDEEDTVCNEWKFAASVIDRLCLMAFSLFTILCTIGILMSAPNF 499
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Match: chrna7 (cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]) HSP 1 Score: 316.235 bits (809), Expect = 1.570e-100 Identity = 191/511 (37.38%), Postives = 289/511 (56.56%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYN--SKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV----------------NGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL + L +NPLERPV N++ + V F +L QI+DVDEKNQ++ T+IWL + W DY+ WN SEY G+T + + +W PD+LLYNSAD F+A V+++ G+ Y+PPG+FKSTC +DV WFPFD+Q C LKFG+W+Y G ++L++ + ++ Y +GEW+L+ RR + Y CC+ + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV VL H++D K+P++ RV++ W A L + P +K+P + N V+ S N+L + F+ ++ + TS D V +V SG +L K+ ++ +I+ + ++ DEE EWKFAA VIDR C++ F+L T GI SA F Sbjct: 24 GEHQRRLYRDLMK-----DYNPLERPVFNDTHSLTVYFSMSLMQIMDVDEKNQVLTTNIWLQLYWYDYYLQWNASEYPGVTNVRFPDSQIWKPDILLYNSADERFDATFHTNVLVNSSGACQYLPPGIFKSTCYIDVRWFPFDLQRCDLKFGSWTYGGWSLDLQM---------------IDADITGYIANGEWDLVEVPGRRNERFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVWVLQYHYHDPEGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACHNKQPRSSLSSVDLNISPGVAQSTNGNLLYIG----------FRGMDTI-HYATSPDSGVICSRLVATGEEDVLLPGAQASSVSSSG---PGETELSKILDEVRYISKRFRDQDEEDTVCNEWKFAASVIDRLCLMAFSLFTILCTIGILMSAPNF 500
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Match: si:ch73-380n15.2 (si:ch73-380n15.2 [Source:ZFIN;Acc:ZDB-GENE-090313-161]) HSP 1 Score: 306.22 bits (783), Expect = 8.986e-97 Identity = 193/528 (36.55%), Postives = 294/528 (55.68%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCS--------------------LHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 V FLS+ L + G Y+++L K L ++ +N LERPV N+S P+ V G TL QIIDVDEKNQ++ T+ WL + W D + WNP Y G+ + N +W PD+LLYNSAD F+A V+++ G+ Y+PPG+ KSTC +DV WFPFD+Q C LKFG+W+++G ++L++Q V++ Y +GEW+L+ +R Y CC+ + DV T+ + RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TV+VL HH+D K+PR++RVI+ W A L + P + K + P S + ++ ++ T N + +L+ S+D A C DSG+ CS ++ ++ ++ +I + ++ DE EWKFAA V+DR C++ F+L + T I SA F Sbjct: 5 VYFLSIFLSYIGSLQGEYQRKLYKEL-----MENYNRLERPVLNDSAPIVVELGLTLLQIIDVDEKNQVLITNAWLQLGWTDVYLSWNPDNYPGVQTLRFPSNQIWTPDILLYNSADERFDATFHTNVLVNASGACQYIPPGILKSTCYIDVRWFPFDIQKCDLKFGSWTHNGWLLDLQMQ---------------AVDISTYIPNGEWDLVGVPGKRNELYYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISGLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMMIVGLSVVVTVLVLQFHHHDPQGGKMPRWVRVILLNWCAWFLRMKKPGEERKANFKYDQSPA----HHASASSIQMGVMPGQPSSTNSTTNGHMNLYFGYH-------SIDSAC---CPPSSDSGVSCSGGRVGGSPNEEQREGVRMFAGEPEIHRILAEVMYIAQRFRDQDEAEAICSEWKFAAAVVDRLCLVAFSLFSIICTFTILMSAPNF 498
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Match: FO907089.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:101882451]) HSP 1 Score: 307.375 bits (786), Expect = 9.458e-97 Identity = 187/502 (37.25%), Postives = 288/502 (57.37%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPP--DSI-CTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELS-SDTHNIYQDLFKKRKSLSE--FETSVDDAVNGDCQ---NVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL + L + +NPLERPV N+S + V F +L QI+DVDEKNQ++ T+IWL + W DY+ WN S+Y G+ + + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ N ++ Y +GEW+L+ RR + Y CC+ + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL H++D K+P++ RV++ W A L + P D I K +++ V + + + N+L ++ + L S DD + Q V + +L +L K+ +++ +I + ++ D + EWKFAA VIDR C++ F++ T GI SA F Sbjct: 54 GEHQRRLYRDL-----MKNYNPLERPVYNDSHSLTVHFSFSLMQIMDVDEKNQVLTTNIWLQLYWTDYYLRWNMSDYPGVNTVRFPDSLIWRPDILLYNSADERFDATFHTNVLVNSSGYCQYLPPGIFKSTCYIDVRWFPFDVQRCDLKFGSWTYGGWALDLQM---------------INADITGYIANGEWDLVEVPGRRNEKFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVLVLQYHYHDPDGAKMPKWTRVLLLNWCAWFLRMRRPGEDRIRLACHNKPARRSSVSSVELSVSQGALQAAGGNMLYFGFRGMEGVHYTAHESHSVLCSRLMANSEDDVLLPGAQIRGGVTSGIVGGTLELELAKILEEVRYIAKRFRDQDADESVCNEWKFAAAVIDRLCLMAFSIFTILCTIGILMSAPNF 535
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Match: si:ch73-380n15.2 (si:ch73-380n15.2 [Source:ZFIN;Acc:ZDB-GENE-090313-161]) HSP 1 Score: 305.834 bits (782), Expect = 1.660e-96 Identity = 193/528 (36.55%), Postives = 294/528 (55.68%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCS--------------------LHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 V FLS+ L + G Y+++L K L ++ +N LERPV N+S P+ V G TL QIIDVDEKNQ++ T+ WL + W D + WNP Y G+ + N +W PD+LLYNSAD F+A V+++ G+ Y+PPG+ KSTC +DV WFPFD+Q C LKFG+W+++G ++L++Q V++ Y +GEW+L+ +R Y CC+ + DV T+ + RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TV+VL HH+D K+PR++RVI+ W A L + P + K + P S + ++ ++ T N + +L+ S+D A C DSG+ CS ++ ++ ++ +I + ++ DE EWKFAA V+DR C++ F+L + T I SA F Sbjct: 12 VYFLSIFLSYIGSLQGEYQRKLYKEL-----MENYNRLERPVLNDSAPIVVELGLTLLQIIDVDEKNQVLITNAWLQLGWTDVYLSWNPDNYPGVQTLRFPSNQIWTPDILLYNSADERFDATFHTNVLVNASGACQYIPPGILKSTCYIDVRWFPFDIQKCDLKFGSWTHNGWLLDLQMQ---------------AVDISTYIPNGEWDLVGVPGKRNELYYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISGLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMMIVGLSVVVTVLVLQFHHHDPQGGKMPRWVRVILLNWCAWFLRMKKPGEERKANFKYDQSPA----HHASASSIQMGVMPGQPSSTNSTTNGHMNLYFGYH-------SIDSAC---CPPSSDSGVSCSGGRVGGSPNEEQREGVRMFAGEPEIHRILAEVMYIAQRFRDQDEAEAICSEWKFAAAVVDRLCLVAFSLFSIICTFTILMSAPNF 505
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Match: ENSXETT00000021532.1 (cholinergic receptor, nicotinic alpha 7 [Source:NCBI gene;Acc:100493611]) HSP 1 Score: 330.102 bits (845), Expect = 6.994e-106 Identity = 193/500 (38.60%), Postives = 294/500 (58.80%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNG--DCQNVEDSGMLCSLHE-----DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G Y+++L K L + +NPLERPV N+S P+ V FG +L QI+DVDEKNQ++ T+IWL + W DY+ WN SEY G+ + +W PD+LLYNSAD F+A+ V+++ G Y+PPG+FKS+C +DV WFPFD+Q C LKFG+W+Y G ++L++ ++ Y +GEW+L+ +R+ Y CC+ ++DV TI++ RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D +P++ R+I+ W A L + P K PV K S S + + SS+ + +Y F+ + + T + G C +D +L ++H DL K+ ++L +I + ++ D++ EWKFAA V+DR C++ F++ T GI SA F Sbjct: 25 GEYQRKLYKEL-----MKNYNPLERPVLNDSHPLTVYFGMSLMQIMDVDEKNQVLTTNIWLQMQWIDYYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDASFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDIQKCNLKFGSWTYGGWSLDLQM---------------LESDISEYISNGEWDLVGVPGKRSENYYECCKEPYLDVTFTIIMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPHGGNMPKWTRIILLNWCAWFLRMKRPGE--------DKVRPVCQHKERRCSMTSVDVNTVSGQQSSNGNMLYIG-FRGLEGIHCTPTPDSGVICGRMTCSPTDDENLLHNVHHSEGDPDLSKILEELRYIANRFRDQDDDESICNEWKFAASVVDRLCLMAFSVFTIICTIGILMSAPNF 495
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Match: clca2 (chloride channel accessory 2 [Source:Xenbase;Acc:XB-GENE-980364]) HSP 1 Score: 295.819 bits (756), Expect = 9.302e-93 Identity = 193/515 (37.48%), Postives = 302/515 (58.64%), Query Frame = 1 Query: 193 ILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANV-LELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNG------DCQNVEDSGMLC--SLHEDLKKVKKQLE---FITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFS 1692 + F + + G Y+++L + L +N LERPV N+S P+ V TL QIIDVDEKNQ++ T+ WL I WND++ W+ +EY G+ + + +W+PD+LLYNSAD F+A V+++ G+ Y+PPG+ KSTC +DV WFPFDVQ C LKFG+W+++G ++L++ ++ Y +GEW+L+ +R Y CC+ + DV T+ + RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S+MV+ LS++ TV+VL HH+D K+P+ +RVI+ W A L + P +K+P I K IY + HS ++++ + ++ + ++ E ++ +G +C ++EDS ++ SL E + ++ K LE +I + +E D + EWKFAA VIDR C++ F+L A T I SA F+ Sbjct: 6 LFFSKGSHQGQYQRKLYRELLR-----NYNRLERPVVNDSQPLLVELQLTLLQIIDVDEKNQVLITNAWLQITWNDFYLTWDQAEYPGVQTLRFPADHIWVPDILLYNSADERFDATFHTNVLVNSTGACQYIPPGILKSTCYIDVRWFPFDVQKCKLKFGSWTHNGWLLDLQMM---------------EADISSYIPNGEWDLVGVPGKRNELYYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISGLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASIMVIVGLSVVVTVLVLQFHHHDPQAGKMPKMVRVILLNWCAWFLRMRKPGE--------NKRP--IPCKYIYPNH--HSSISSIEMNIAPGHQSTNGNIVYCGYHTLESPCCPPNSDSGVMCARVNCPSLEDSDLIQKKSLKESMPEIVKILEEVQYIARRFREQDAGEEICSEWKFAAAVIDRLCLVAFSLFAIIATFTILMSAPNFT 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Match: mppe1 (metallophosphoesterase 1 [Source:Xenbase;Acc:XB-GENE-987928]) HSP 1 Score: 270.396 bits (690), Expect = 3.975e-83 Identity = 164/493 (33.27%), Postives = 271/493 (54.97%), Query Frame = 1 Query: 241 LKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHE------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFS 1692 ++H + + ++NP RPV N S PV + F +++Q++ VDE NQI++T++WL +WNDY WNPS+YGGI + + + +W PD++LYN+A F+ + K V+ Y G ++++PP +FKS+C +DVT+FPFD QNC+LKFG+W+YD +NL + + + + SGEW +I++ + +Y CC + D+ ++ I R +Y ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ L KV+F+T P+ + KP +D I +S++ S YQD L TS D A N + +S LH ++++ + + FI +K DE + +WK+ A VIDR + +F L+ T G+F + FS Sbjct: 27 VEHRLYEDLLKSYNPYIRPVMNVSDPVILHFEVSMSQLVKVDEVNQIMETNLWLRHLWNDYKLKWNPSDYGGIEFLRIPASQIWRPDIVLYNNAVGAFHVDDKAKAVVRYSGDVTWIPPAIFKSSCKIDVTFFPFDYQNCSLKFGSWTYDKAKINLVM-------------IGSKINLKEFWESGEWVIINAPGYKHEIKYNCCVEIYQDITYSLYIRRLPLFYTIYIIIPCLLISCLTILVFYLPSDCGEKVTLCMSVLLSLTVFLLVITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPHWVKRFFLHLLPKVMFMTRPE-----KQPYALKPQAYLD--ISSSEIR----------SCQDQLFYQDSSCACGQLKRLYTS-DTACNVTRGSSLESMYNLGLHSGSGLSPEIREAIEDVHFIAENMKAQDEAKEVQDDWKYVAMVIDRIFLWVFVLVCILGTAGLFLQPLLFS 488
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Match: mppe1 (metallophosphoesterase 1 [Source:Xenbase;Acc:XB-GENE-987928]) HSP 1 Score: 270.011 bits (689), Expect = 5.363e-83 Identity = 164/493 (33.27%), Postives = 271/493 (54.97%), Query Frame = 1 Query: 241 LKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHE------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFS 1692 ++H + + ++NP RPV N S PV + F +++Q++ VDE NQI++T++WL +WNDY WNPS+YGGI + + + +W PD++LYN+A F+ + K V+ Y G ++++PP +FKS+C +DVT+FPFD QNC+LKFG+W+YD +NL + + + + SGEW +I++ + +Y CC + D+ ++ I R +Y ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ L KV+F+T P+ + KP +D I +S++ S YQD L TS D A N + +S LH ++++ + + FI +K DE + +WK+ A VIDR + +F L+ T G+F + FS Sbjct: 24 VEHRLYEDLLKSYNPYIRPVMNVSDPVILHFEVSMSQLVKVDEVNQIMETNLWLRHLWNDYKLKWNPSDYGGIEFLRIPASQIWRPDIVLYNNAVGAFHVDDKAKAVVRYSGDVTWIPPAIFKSSCKIDVTFFPFDYQNCSLKFGSWTYDKAKINLVM-------------IGSKINLKEFWESGEWVIINAPGYKHEIKYNCCVEIYQDITYSLYIRRLPLFYTIYIIIPCLLISCLTILVFYLPSDCGEKVTLCMSVLLSLTVFLLVITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPHWVKRFFLHLLPKVMFMTRPE-----KQPYALKPQAYLD--ISSSEIR----------SCQDQLFYQDSSCACGQLKRLYTS-DTACNVTRGSSLESMYNLGLHSGSGLSPEIREAIEDVHFIAENMKAQDEAKEVQDDWKYVAMVIDRIFLWVFVLVCILGTAGLFLQPLLFS 485
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Match: mppe1 (metallophosphoesterase 1 [Source:Xenbase;Acc:XB-GENE-987928]) HSP 1 Score: 270.011 bits (689), Expect = 5.544e-83 Identity = 164/493 (33.27%), Postives = 271/493 (54.97%), Query Frame = 1 Query: 241 LKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHE------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFS 1692 ++H + + ++NP RPV N S PV + F +++Q++ VDE NQI++T++WL +WNDY WNPS+YGGI + + + +W PD++LYN+A F+ + K V+ Y G ++++PP +FKS+C +DVT+FPFD QNC+LKFG+W+YD +NL + + + + SGEW +I++ + +Y CC + D+ ++ I R +Y ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ L KV+F+T P+ + KP +D I +S++ S YQD L TS D A N + +S LH ++++ + + FI +K DE + +WK+ A VIDR + +F L+ T G+F + FS Sbjct: 19 VEHRLYEDLLKSYNPYIRPVMNVSDPVILHFEVSMSQLVKVDEVNQIMETNLWLRHLWNDYKLKWNPSDYGGIEFLRIPASQIWRPDIVLYNNAVGAFHVDDKAKAVVRYSGDVTWIPPAIFKSSCKIDVTFFPFDYQNCSLKFGSWTYDKAKINLVM-------------IGSKINLKEFWESGEWVIINAPGYKHEIKYNCCVEIYQDITYSLYIRRLPLFYTIYIIIPCLLISCLTILVFYLPSDCGEKVTLCMSVLLSLTVFLLVITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPHWVKRFFLHLLPKVMFMTRPE-----KQPYALKPQAYLD--ISSSEIR----------SCQDQLFYQDSSCACGQLKRLYTS-DTACNVTRGSSLESMYNLGLHSGSGLSPEIREAIEDVHFIAENMKAQDEAKEVQDDWKYVAMVIDRIFLWVFVLVCILGTAGLFLQPLLFS 480
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Match: Chrna7 (cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]) HSP 1 Score: 325.094 bits (832), Expect = 3.936e-104 Identity = 195/500 (39.00%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ R+I+ W A L + P K P K S S L A +S+ + +Y F+ + + T V G C D ++ H DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRRLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ---------------EADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGE--------DKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIG-FRGLEGMHCAPTPDSGVVCGRLACSPTHDEHLMHGTHPSDGDPDLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Match: Chrna3 (cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]) HSP 1 Score: 268.855 bits (686), Expect = 1.600e-82 Identity = 160/500 (32.00%), Postives = 279/500 (55.80%), Query Frame = 1 Query: 211 VNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSH-SLLANVLELSSDTHNIYQD-----LFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAV 1683 +A E RL ++LF + +N + RPV N S PV + F +++Q++ VDE NQI++T++WL IWNDY W PS+Y G+ + V +W PD++LYN+AD +F + K ++ Y G ++++PP +FKS+C +DVT+FPFD QNCT+KFG+WSYD ++L + ++ + Y SGEW +I + + +Y CCE + D+ ++ I R +Y N ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ + L +V+F+T P S + K + Y +++S+ + + S QD +R +S F ++ + + ++V+ L +L ++K+ + +++I +K + + +WK+ A VIDR + +F L+ T G+F + Sbjct: 28 ASASEAEHRLFQYLF-----EDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL-------------IGSSMNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSTEEDAPKT---------RNFYGAELSNLNCFSRADSKSCKEGYPCQDGTCGYCHHRRVKISNFSANLTRSSSS--ESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPL 498
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Match: Chrna3 (cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]) HSP 1 Score: 268.855 bits (686), Expect = 1.712e-82 Identity = 160/500 (32.00%), Postives = 279/500 (55.80%), Query Frame = 1 Query: 211 VNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSH-SLLANVLELSSDTHNIYQD-----LFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAV 1683 +A E RL ++LF + +N + RPV N S PV + F +++Q++ VDE NQI++T++WL IWNDY W PS+Y G+ + V +W PD++LYN+AD +F + K ++ Y G ++++PP +FKS+C +DVT+FPFD QNCT+KFG+WSYD ++L + ++ + Y SGEW +I + + +Y CCE + D+ ++ I R +Y N ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ + L +V+F+T P S + K + Y +++S+ + + S QD +R +S F ++ + + ++V+ L +L ++K+ + +++I +K + + +WK+ A VIDR + +F L+ T G+F + Sbjct: 23 ASASEAEHRLFQYLF-----EDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL-------------IGSSMNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSTEEDAPKT---------RNFYGAELSNLNCFSRADSKSCKEGYPCQDGTCGYCHHRRVKISNFSANLTRSSSS--ESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPL 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Match: Chrna6 (cholinergic receptor, nicotinic, alpha polypeptide 6 [Source:MGI Symbol;Acc:MGI:106213]) HSP 1 Score: 259.61 bits (662), Expect = 4.468e-79 Identity = 162/501 (32.34%), Postives = 266/501 (53.09%), Query Frame = 1 Query: 193 ILFFRDVNAGSYEKRLLKHLFNPNRVDAH-NPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAV 1683 + F+ E++L LF AH N RPV+N S PV V F +TQ+ +VDE NQI++T++WL IW DY W+P+EY GI + V + +W PD++LYN+A +F K ++ YDG +++ PP +FKS+C MD+T+FPFD QNC+LKFG+W+YD +++L I V+M + + EWE++ + + +Y CCE + D+ + I R +Y N ++PC+ IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P++++ I Q +L + P + K P K K +H + +L+ KR+S + V +N E S D++ V + ++FI +K ++E + +WK+ A V+DR + +F ++ T G+F + Sbjct: 22 LALFKGSTGCESEEQLFHRLF------AHYNRFIRPVENVSDPVTVHFELAITQLANVDEVNQIMETNLWLRHIWKDYRLRWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLI-------------IGSKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTIFLQAFPSILMMRKP--LDKTKEAGGVKDPKSHTKRPAKVKFTHRGESKLLKECHHCQKSSDIAPGKRRSSQQPARWV-------AENSEHSS-------DVEDVIESVQFIAENMKSHNETNEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQPL 487
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Match: Chrna3 (cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]) HSP 1 Score: 248.825 bits (634), Expect = 2.776e-75 Identity = 133/351 (37.89%), Postives = 217/351 (61.82%), Query Frame = 1 Query: 211 VNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHH---NDHKVPRFIRVIINQWLAKVLFITPPDS 1254 +A E RL ++LF + +N + RPV N S PV + F +++Q++ VDE NQI++T++WL IWNDY W PS+Y G+ + V +W PD++LYN+AD +F + K ++ Y G ++++PP +FKS+C +DVT+FPFD QNCT+KFG+WSYD ++L + ++ + Y SGEW +I + + +Y CCE + D+ ++ I R +Y N ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ TV VLN H+ H +P +++ + L +V+F+T P S Sbjct: 23 ASASEAEHRLFQYLF-----EDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL-------------IGSSMNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTS 355
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Match: sp|P22770|ACHA7_CHICK (Neuronal acetylcholine receptor subunit alpha-7 OS=Gallus gallus OX=9031 GN=CHRNA7 PE=1 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 5.298e-104 Identity = 194/505 (38.42%), Postives = 290/505 (57.43%), Query Frame = 1 Query: 205 RDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNG--DCQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 R+ G ++++L K L +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ C LKFG+W+Y G ++L++Q ++ Y +GEW+L+ +RT Y CC+ + D+ T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + + S+ + +Y F+ + T+ + G C E+ +L S H DL K+ +++ +I + ++ DEE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 18 RESLQGEFQRKLYKELLK-----NYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQMQ---------------EADISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLSSMEMNTVSGQQCSNGNMLYIG-FRGLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGHPSEGDPDLAKILEEVRYIANRFRDQDEEEAICNEWKFAASVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Match: sp|Q05941|ACHA7_RAT (Neuronal acetylcholine receptor subunit alpha-7 OS=Rattus norvegicus OX=10116 GN=Chrna7 PE=1 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 2.199e-103 Identity = 195/500 (39.00%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ R+I+ W A L + P K P K S S L A +S+ + +Y F+ + + T V G C D ++ H DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRRLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ---------------EADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGE--------DKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIG-FRGLEGMHCAPTPDSGVVCGRLACSPTHDEHLMHGAHPSDGDPDLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Match: sp|P49582|ACHA7_MOUSE (Neuronal acetylcholine receptor subunit alpha-7 OS=Mus musculus OX=10090 GN=Chrna7 PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.753e-103 Identity = 195/500 (39.00%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ R+I+ W A L + P K P K S S L A +S+ + +Y F+ + + T V G C D ++ H DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRRLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ---------------EADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGE--------DKVRPACQHKPRRCSLASVELSAGAGPPTSNGNLLYIG-FRGLEGMHCAPTPDSGVVCGRLACSPTHDEHLMHGTHPSDGDPDLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Match: sp|Q866A2|ACHA7_MACMU (Neuronal acetylcholine receptor subunit alpha-7 OS=Macaca mulatta OX=9544 GN=CHRNA7 PE=2 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 8.467e-103 Identity = 195/500 (39.00%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y SGEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGMHCAPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Match: sp|P36544|ACHA7_HUMAN (Neuronal acetylcholine receptor subunit alpha-7 OS=Homo sapiens OX=9606 GN=CHRNA7 PE=1 SV=5) HSP 1 Score: 322.013 bits (824), Expect = 4.303e-102 Identity = 194/500 (38.80%), Postives = 286/500 (57.20%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGD--CQNVEDSGMLCSLH-----EDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G ++++L K L V +NPLERPV N+S P+ V F +L QI+DVDEKNQ++ T+IWL + W D++ WN SEY G+ + +W PD+LLYNSAD F+A V+++ G Y+PPG+FKS+C +DV WFPFDVQ+C LKFG+WSY G ++L++Q ++ Y +GEW+L+ +R+ + Y CC+ + DV T+ + RR YY N ++PC++ISA+ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF S M++ LS++ TVIVL HH+D K+P++ RVI+ W A L + P K P K S S + A +S+ + +Y F+ + T V G C D +L DL K+ +++ +I + + DE EWKFAA V+DR C++ F++ T GI SA F Sbjct: 23 GEFQRKLYKEL-----VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ---------------EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGE--------DKVRPACQHKQRRCSLASVEMSAVAPPPASNGNLLYIG-FRGLDGVHCVPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNF 493
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Match: A0A267EGF0 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020283g1 PE=3 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 6.144e-120 Identity = 228/541 (42.14%), Postives = 315/541 (58.23%), Query Frame = 1 Query: 217 AGSYEKRLLKHLFNP----NRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXX--------XXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNS------------------KVSHSLLANVLELSSDTHNIYQDLFKKRK---------SLSEFETSVDDAVNGDCQN-----------VEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 AG +E+RLL +LF+P N ++ HN +ERPVKNES + V F +L QIID+DEKNQI+ +IWL + W+DYHF W+P ++GGIT IN+ P VW PD+LLYNSAD F+ VVI + G+M+++PPG+F+STC +D TWFPFD Q C LKFG+WSYDG ++L+++ N + S S IG ++ Y SGEW L D +RT Y CC FID+ I I RR YY N ++PC++IS+++LL F+LP DAGEKISLGVTIMLSLSMFQLL+AD MPQ+S S+PL+ +YF MV+ +LS++FTVIVLN HH D H VP +++ I +LA +L + + +K PV + + S + S SLLANVL+L D + S ++ + +++G + G CS +L V ++L+ IT KI ++ +G+ EWKFAA V+DR C+IIF+ T I FSA Sbjct: 22 AGLHERRLLYYLFDPANRTNPLEVHNSMERPVKNESNVLYVWFKVSLQQIIDLDEKNQILFANIWLDLTWHDYHFMWDPKDFGGITKINIDPKRVWRPDILLYNSADEKFDGTYPTNVVIEHTGNMNFIPPGMFRSTCKIDTTWFPFDTQVCKLKFGSWSYDGGTLDLRLKCSNESLSTNEMRLNDPNNCSEIGGADLETYVPSGEWYLEGMDGKRTAAEYDCCPYPFIDLSYFIQIRRRTLYYGINLIIPCVLISSMSLLTFVLPPDAGEKISLGVTIMLSLSMFQLLVADAMPQTSESVPLIGMYFSCTMVMCSLSVVFTVIVLNYHHRDAESHPVPNWVKKFICTYLANILCMRN-------HHRDEEKEPVYLRRRKNASFRTSSYREAANANVELKERSSKSLLANVLDLEDDIRTVGGVGGVGVSGIGASAGAFSPPTYQNVMGSSMDGGAERGGGGGGGGGGGGPSCGSNCSTRNELAAVVRELQVITKKIADDTADGEISSEWKFAARVVDRLCLIIFSCFTVISTCAILFSA 555
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Match: A0A267DHA4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020283g2 PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 2.039e-119 Identity = 227/543 (41.80%), Postives = 315/543 (58.01%), Query Frame = 1 Query: 217 AGSYEKRLLKHLFNP----NRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXX--------XXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNS------------------KVSHSLLANVLELSSDTHNIYQDLFKKRK---------SLSEFETSVDDAVNGDCQN-------------VEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 AG +E+RLL +LF+P N ++ HN +ERPVKNES + V F +L QIID+DEKNQI+ +IWL + W+DYHF W+P ++GGIT IN+ P VW PD+LLYNSAD F+ VVI + G+M+++PPG+F+STC +D TWFPFD Q C LKFG+WSYDG ++L+++ N + S S IG ++ Y SGEW L D +RT Y CC FID+ I I RR YY N ++PC++IS+++LL F+LP DAGEKISLGVTIMLSLSMFQLL+AD MPQ+S S+PL+ +YF MV+ +LS++FTVIVLN HH D H VP +++ I +LA +L + + +K P+ + + S + S SLLANVL+L D + S ++ + +++G + G CS +L V ++L+ IT KI ++ +G+ EWKFAA V+DR C+IIF+ T I FSA Sbjct: 22 AGLHERRLLYYLFDPANRTNPLEVHNSMERPVKNESNVLYVWFKVSLQQIIDLDEKNQILFANIWLDLTWHDYHFMWDPKDFGGITKINIDPKRVWRPDILLYNSADEKFDGTYPTNVVIEHTGNMNFIPPGMFRSTCKIDTTWFPFDTQVCKLKFGSWSYDGGTLDLRLKCSNESLSTNEMRLNDPNNCSEIGGADLETYVPSGEWYLEGMDGKRTAAEYDCCPYPFIDLSYFIQIRRRTLYYGINLIIPCVLISSMSLLTFVLPPDAGEKISLGVTIMLSLSMFQLLVADAMPQTSESVPLIGMYFSCTMVMCSLSVVFTVIVLNYHHRDAESHPVPNWVKKFICTYLANILCMRN-------HHRDEEKEPIYLRRRKNASFRTSSYREAANANVELKERSSKSLLANVLDLEDDIRTVGGVGGVGVSGIGASAGAFSPPTYQNVMGSSMDGGAERGGGGGGGGGGGGGGPSCGSNCSTRNELAAVVRELQVITKKIADDTADGEISSEWKFAARVVDRLCLIIFSCFTVISTCAILFSA 557
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Match: A0A348BSV9 (Nicotinic acetylcholine receptor alpha6 subunit 3 OS=Nilaparvata lugens OX=108931 GN=nAChRa6 PE=2 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 5.459e-116 Identity = 207/499 (41.48%), Postives = 306/499 (61.32%), Query Frame = 1 Query: 202 FRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 F+ G +EKRLL HL N +D +N LERPV NES +EV FG TL QIIDVDEKNQ++ T+IWLS+ WNDY+ WN SEYGG+ + + PN +W PDVL+YNSAD F+ VV+ +DGS YVPPG+FKSTC MD+TWFPFD QNC +KFG+W+YDG + L+++ + ++ + +GEW L+ + V Y CC +IDV TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A++MP +S ++PL+ YF +M + S++ TV+VLN HH H++P +++ + QWL +L + P K ++K ++ ++ + S SL+AN+L++ D + + S F G ++DSG +L+ + ++L+FIT ++K+ DEE + + +WKFAA V+DRFC+I+FT+ T + SA Sbjct: 17 FQSSMQGPHEKRLLNHLLN---MDTYNTLERPVANESEALEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRWNASEYGGVKDLRITPNKIWRPDVLMYNSADEGFDGTYHTNVVVRHDGSCLYVPPGIFKSTCKMDITWFPFDDQNCKMKFGSWTYDGSQLQLELK------------SEEGGDLSDFITNGEWYLLGMPGVKNVLTYQCCPESYIDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPNWVKSVFLQWLPWILGMNRP------GKKITRKTILMTNRMKELHLPDRSSKSLMANILDIDDDFRHC-------STANSSFMRGGGVGGGGGGITLDDSGPCTLAQRELQLIVRELQFITNRMKKADEEAELISDWKFAAMVVDRFCLIVFTMFTIIATVAVLLSA 487
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Match: A0A2Z4N5S7 (Nicotinic acetylcholine receptor alpha 6 subunit OS=Laodelphax striatellus OX=195883 PE=2 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 9.656e-116 Identity = 210/510 (41.18%), Postives = 309/510 (60.59%), Query Frame = 1 Query: 169 LNVLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 + L L V+L F+ G +EKRLL HL N +D +N LERPV NES +EV FG TL QIIDVDEKNQI+ T+ WL++ W DY+ WN SEYGG+ + + PN +W PDVL+YNSAD F+ VV+ +DGS YVPPG+FKSTC MD+TWFPFD QNC +KFG+W+YDG + L+++ + ++ + +GEW L+ + V Y CC +IDV TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A+ +PQ S ++PLL YF +M + S++ TV+VLN HH H++P +++ + QWL +L + P K ++K ++ ++ + S SL+AN+L++ D + + S F G ++DSG +L+ + ++L+FIT ++K+ DEE + + +WKFAA V+DRFC+I+FT+ T + SA Sbjct: 6 ITALLLHVVLQFQSSMQGPHEKRLLNHLLN---MDTYNTLERPVANESEALEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWTDYNLMWNASEYGGVKDLRITPNKIWRPDVLMYNSADEGFDGTYHTNVVVRHDGSCLYVPPGIFKSTCKMDITWFPFDDQNCKMKFGSWTYDGSQLQLELK------------SEEGGDLSDFITNGEWYLLGMPGVKNVLTYQCCPESYIDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPNWVKSVFLQWLPWILGMNRP------GKKITRKTILMTNRMKELHLPDRSSKSLMANILDIDDDFRHC------SSTANSSFMRGGSGGGGGGI-TLDDSGPCTLAQRELQLIVRELQFITNRMKKADEEAELISDWKFAAMVVDRFCLIVFTMFTIIATVAVLLSA 487
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Match: A0A348BSV8 (Nicotinic acetylcholine receptor alpha6 subunit 2 OS=Nilaparvata lugens OX=108931 GN=nAChRa6 PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 1.224e-115 Identity = 207/499 (41.48%), Postives = 304/499 (60.92%), Query Frame = 1 Query: 202 FRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTI---YNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 F+ G +EKRLL HL N +D +N LERPV NES +EV FG TL QIIDVDEKNQI+ T+ WL++ WNDY+ WN SEYGG+ + + PN +W PDVL+YNSAD F+ VV+ +DGS YVPPG+FKSTC MD+TWFPFD QNC +KFG+W+YDG + L+++ + ++ + +GEW L+ + V Y CC +IDV TI I RR YY FN ++PC++IS++ALL F LP D+GEK++LGVTI+LSL++F L+A+ +PQ S ++PLL YF +M + S++ TV+VLN HH H++P +++ + QWL +L + P K ++K ++ ++ + S SL+AN+L++ D + + S F G ++DSG +L+ + ++L+FIT ++K+ DEE + + +WKFAA V+DRFC+I+FT+ T + SA Sbjct: 17 FQSSMQGPHEKRLLNHLLN---MDTYNTLERPVANESEALEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNASEYGGVKDLRITPNKIWRPDVLMYNSADEGFDGTYHTNVVVRHDGSCLYVPPGIFKSTCKMDITWFPFDDQNCKMKFGSWTYDGSQLQLELK------------SEEGGDLSDFITNGEWYLLGMPGVKNVLTYQCCPESYIDVTFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPNWVKSVFLQWLPWILGMNRP------GKKITRKTILMTNRMKELHLPDRSSKSLMANILDIDDDFRHC-------STANSSFMRGGGVGGGGGGITLDDSGPCTLAQRELQLIVRELQFITNRMKKADEEAELISDWKFAAMVVDRFCLIVFTMFTIIATVAVLLSA 487
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Match: chrna7 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:103030483]) HSP 1 Score: 318.161 bits (814), Expect = 2.034e-101 Identity = 195/515 (37.86%), Postives = 297/515 (57.67%), Query Frame = 1 Query: 193 ILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV-NGDCQNVEDSGMLCS------------LHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 I +R G +++RL + L + +NPLERPV N+S + V F +L QI+DVDEKNQ++ ++IWL + W D++ WN S+Y G+T + N +W PD+LLYNSAD F+A VV+S DGS Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ ++ Y +GEW+L+ +R + Y CC + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV VL H++D K+P + R+++ W A L + P + +K+P I ++ V S N+L + F+ +S+ + TS D V G + + +L S + +L K+ +++ +I+ + ++ DEE EWKFAA VIDR C++ F++ T GI SA F Sbjct: 14 ICLWRVSLQGEHQRRLYQDL-----MKNYNPLERPVFNDSQSLTVNFSFSLMQIMDVDEKNQVLTSNIWLQLYWYDHYLKWNLSDYPGVTNVRFPDNQIWKPDILLYNSADERFDATFHTNVVVSADGSCHYLPPGIFKSTCYIDVKWFPFDVQRCALKFGSWTYGGWSLDLQMM---------------EADISGYIANGEWDLVEVQGQRNEKFYDCCREPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVWVLQYHYHDPDGGKMPTWTRIVLLNWCAWFLRMKRPGED-RVRPCHNKQPRSSISSVELSTGVPQSTNGNMLYIG----------FRGMESMP-YATSPDSGVICGRLVSAGEEDVLLSTNPAPSISSGGHVDTELAKILEEVRYISKRFRDQDEEETVCSEWKFAASVIDRLCLMAFSIFTILCTIGILMSAPNF 496
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Match: chrna7 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:103030483]) HSP 1 Score: 315.079 bits (806), Expect = 1.835e-100 Identity = 193/506 (38.14%), Postives = 294/506 (58.10%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV-NGDCQNVEDSGMLCSLHE------------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL + L + +NPLERPV N+S + V F +L QI+DVDEKNQ++ ++IWL + W D++ WN S+Y G+T + N +W PD+LLYNSAD F+A VV+S DGS Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ ++ Y +GEW+L+ +R + Y CC + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV VL H++D K+P + R+++ W A L + P + +K+P I ++ V S N+L + F+ +S+ + TS D V G + + +L S + +L K+ +++ +I+ + ++ DEE EWKFAA VIDR C++ F++ T GI SA F Sbjct: 10 GEHQRRLYQDL-----MKNYNPLERPVFNDSQSLTVNFSFSLMQIMDVDEKNQVLTSNIWLQLYWYDHYLKWNLSDYPGVTNVRFPDNQIWKPDILLYNSADERFDATFHTNVVVSADGSCHYLPPGIFKSTCYIDVKWFPFDVQRCALKFGSWTYGGWSLDLQMM---------------EADISGYIANGEWDLVGKG-QRNEKFYDCCREPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVWVLQYHYHDPDGGKMPTWTRIVLLNWCAWFLRMKRPGED-RVRPCHNKQPRSSISSVELSTGVPQSTNGNMLYIG----------FRGMESM-PYATSPDSGVICGRLVSAGEEDVLLSTNPAPSISSGGHVDTELAKILEEVRYISKRFRDQDEEETVCSEWKFAASVIDRLCLMAFSIFTILCTIGILMSAPNF 482
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Match: chrna7 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:103030483]) HSP 1 Score: 314.309 bits (804), Expect = 2.217e-100 Identity = 189/487 (38.81%), Postives = 285/487 (58.52%), Query Frame = 1 Query: 277 HNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV-NGDCQNVEDSGMLCS------------LHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 +NPLERPV N+S + V F +L QI+DVDEKNQ++ ++IWL + W D++ WN S+Y G+T + N +W PD+LLYNSAD F+A VV+S DGS Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ ++ Y +GEW+L+ +R + Y CC + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV VL H++D K+P + R+++ W A L + P + +K+P I ++ V S N+L + F+ +S+ + TS D V G + + +L S + +L K+ +++ +I+ + ++ DEE EWKFAA VIDR C++ F++ T GI SA F Sbjct: 4 YNPLERPVFNDSQSLTVNFSFSLMQIMDVDEKNQVLTSNIWLQLYWYDHYLKWNLSDYPGVTNVRFPDNQIWKPDILLYNSADERFDATFHTNVVVSADGSCHYLPPGIFKSTCYIDVKWFPFDVQRCALKFGSWTYGGWSLDLQMM---------------EADISGYIANGEWDLVEVQGQRNEKFYDCCREPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVWVLQYHYHDPDGGKMPTWTRIVLLNWCAWFLRMKRPGED-RVRPCHNKQPRSSISSVELSTGVPQSTNGNMLYIG----------FRGMESMP-YATSPDSGVICGRLVSAGEEDVLLSTNPAPSISSGGHVDTELAKILEEVRYISKRFRDQDEEETVCSEWKFAASVIDRLCLMAFSIFTILCTIGILMSAPNF 463
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Match: ENSAMXT00000053066.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:103033738]) HSP 1 Score: 309.301 bits (791), Expect = 1.406e-98 Identity = 188/481 (39.09%), Postives = 279/481 (58.00%), Query Frame = 1 Query: 277 HNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSL-----HED--LKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 +NPLERPV N+S + V F +L QI+DVDEKNQ++ T+IWL + W DY+ WN ++Y G+ + N +W PD+LLYNSAD F+A V+++ G Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ + ++ Y +GEW+L+ RR + Y CC+ + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL HH+D K+P++ RV++ W A L + P S +K+ ++ S +L N N+ F+ + + + TS DSG+LC ED L K+ ++L +I + + DE+ EWKFAA VIDR C++ F++ T GI SA F Sbjct: 4 YNPLERPVFNDSQSLTVHFSFSLMQIMDVDEKNQVLTTNIWLQLYWVDYYLQWNVTDYPGVANVRFPDNQIWRPDILLYNSADERFDATFHTNVLVNSSGYCQYLPPGIFKSTCYIDVRWFPFDVQRCDLKFGSWTYGGWSLDLQMM---------------DADITGYIANGEWDLVEVPGRRNEKFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVLLLNWCAWFLRMRRPGEERVRSACHNKQLHRGSVSSVELSVSQGALQPN-------NSNMLYIGFRGMEGV-HYTTS------------PDSGVLCGRIMGGSEEDTELAKILEELRYIARRFRNQDEDESVCNEWKFAAAVIDRLCLMAFSIFTILCTFGILMSAPNF 449
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Match: ENSAMXT00000055784.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:103033738]) HSP 1 Score: 304.294 bits (778), Expect = 3.091e-96 Identity = 187/500 (37.40%), Postives = 282/500 (56.40%), Query Frame = 1 Query: 277 HNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV------NGDCQNVEDSGMLCSLHE--------------------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 +NPLERPV N+S + V F +L QI+DVDEKNQ++ T+IWL + W DY+ WN ++Y G+ + N +W PD+LLYNSAD F+A V+++ G Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ + ++ Y +GEW+L+ RR + Y CC+ + DV T+V+ RR YY N ++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL HH+D K+P++ RV++ W A L + P S +K+ ++ S +L N N+ F+ + + + TS D V G ++V G S ++ +L K+ ++L +I + + DE+ EWKFAA VIDR C++ F++ T GI SA F Sbjct: 4 YNPLERPVFNDSQSLTVHFSFSLMQIMDVDEKNQVLTTNIWLQLYWVDYYLQWNVTDYPGVANVRFPDNQIWRPDILLYNSADERFDATFHTNVLVNSSGYCQYLPPGIFKSTCYIDVRWFPFDVQRCDLKFGSWTYGGWSLDLQMM---------------DADITGYIANGEWDLVEVPGRRNEKFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVLLLNWCAWFLRMRRPGEERVRSACHNKQLHRGSVSSVELSVSQGALQPN-------NSNMLYIGFRGMEGV-HYTTSPDSGVLCGRIMGGSEEDVLLPGATVSSYQGRVGVGGRVTGGVVGGATETELAKILEELRYIARRFRNQDEDESVCNEWKFAAAVIDRLCLMAFSIFTILCTFGILMSAPNF 480
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Match: chrna3 (cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]) HSP 1 Score: 254.603 bits (649), Expect = 4.808e-78 Identity = 158/509 (31.04%), Postives = 270/509 (53.05%), Query Frame = 1 Query: 214 NAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVE----------------DSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAV 1683 A RL K LF ++NP RPV N S PV V F +++Q++ +DE NQI+ T++WL WNDY F WNP ++ G+ I V + +W PD++LYN+AD +F K ++ YDG++ ++PP +FKS+C +DVT+FPFD QNCT+KFG+W+YD ++L + + + + SGEW +I + +Y CCE + D+ ++ + R +Y N ++PC++IS + +L F LPSD GEK++L ++++LSL++F L++ + +P +SL +PL+ Y L M+ TLSI+ T+ VLN H+ H +P ++R + L K++ + PP ++ T AS P ++ + + L A L ++ + + ++ S E V + + LC L ++++V +++I ++ DE + +WK+ A V+DR + +F L+ T G+F + Sbjct: 3 RASEAASRLYKTLFT-----SYNPYIRPVFNVSDPVIVRFEVSMSQLVKLDEVNQIMATNLWLKHTWNDYKFQWNPGQFEGMEYIRVPSDKIWKPDIVLYNNADGDFQVEGKTKALLKYDGTVMWMPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWTYDKAKIDLVL-------------VGTKINLKDFWESGEWVIIDVPGYKHDIKYNCCEQIYPDITYSVYVRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLSISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITIFVLNVHYRTPEAHTMPNWVRRVFLDTLPKIMLLQPPKG--SVGTAAS--PDAVVSEA---DQQPACLCAGELSAAAASSSSSCQSGGISRASSSMEAHVSSVRLPRLRAADVMSDELSSSSSTESLDALLALCLLSPEIRQVIDSVKYIAENLRTQDEAKEVCDDWKYVAMVVDRIFLWVFVLVCILGTAGLFLQPL 486
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008550.1 (pep scaffold:Pmarinus_7.0:GL476601:34:38373:1 gene:ENSPMAG00000007717.1 transcript:ENSPMAT00000008550.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 239.195 bits (609), Expect = 6.881e-73 Identity = 147/429 (34.27%), Postives = 231/429 (53.85%), Query Frame = 1 Query: 445 EYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPD----------SICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFS 1692 E+ G+ + P+ +W PD+LLYNSAD F+A V+++Y G+ ++PPG+ KSTC +DV WFPFDVQ C LKFG+W++DG ++L++ + Y +GEW+L+ +R Y CC+ + DV T+ I RR YY N ++PC++ISA++LL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+ YF S M++ S++ TVIVL HH++ K+P+++RVI+ W A L + P SI ++ S ++ I+ H + + D + F ++ + G+ Q + ++ K+ +L +I + + DE EWKFAA V+DR C++ FTL T I SA F+ Sbjct: 2 EHPGVKNLRFQPHQIWTPDILLYNSADERFDATFHTNVLVNYTGNCQHLPPGMLKSTCYIDVRWFPFDVQKCDLKFGSWTHDGWLIDLQM---------------LEADTSGYIANGEWDLVEIPGKRNELYYDCCQEPYPDVTYTLTIRRRTLYYGLNLLVPCVLISALSLLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIGQYFASTMIIVAFSVVVTVIVLQYHHHNPDGKKMPQWVRVILLDWCAWFLRMKQPGRERHELARRLSILHRNSMVSLDLALLSASGIHKKTNGHGVFIGFTNPDAPQQPPTSDSGVMCGRETCFNSTGPEEEPGNAQRGMPPDPTAGMSSEITKILIELRYIAGRFRTQDENEAIASEWKFAAAVVDRLCLLAFTLFTIISTISILMSAPHFT 415
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Match: chrnb3b (cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]) HSP 1 Score: 210.305 bits (534), Expect = 1.249e-61 Identity = 126/339 (37.17%), Postives = 199/339 (58.70%), Query Frame = 1 Query: 229 EKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND----HKVPRFIRVIINQWLAKVL 1233 E RLLK + + RPV S VEV FG + Q++DVDEKNQ++ T++WL W D + WNP +YGGI +I V +++W+PD++LY++AD F + K V+ +DG + + PP ++KS+CT+DVT+FPFD QNC++KFG+W+YDG V+L +V+ Y +GEWE +++ + V+ +I + VI R +Y ++PC+ +S + + F LPSD GEKISL ++++SL++F L++ + +P SS +PL+ Y L +M+ TLSI+ TV V+N HH H + ++R + L K+L Sbjct: 35 EDRLLKRMLK-----DYQKWVRPVDKLSDTVEVKFGLGIAQLVDVDEKNQLMTTNVWLKQEWVDINLRWNPDDYGGINSIRVPASSIWLPDIVLYDNADGRFEGSIVTKAVVKHDGRIKWTPPAIYKSSCTIDVTFFPFDQQNCSMKFGSWTYDGTLVDL-------------IMVNSDVDRGEYFDNGEWEFLNATGNKGVRLDGHRFYPYI--TYSFVIRRLPLFYTLFLIVPCLGLSFLTVFVFYLPSDEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIITVFVINVHHRSSSTHHPMAPWVRQLFLHKLPKIL 353
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000149.1 (pep scaffold:Pmarinus_7.0:GL480219:31373:46583:1 gene:ENSPMAG00000000129.1 transcript:ENSPMAT00000000149.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 204.912 bits (520), Expect = 8.238e-60 Identity = 137/445 (30.79%), Postives = 217/445 (48.76%), Query Frame = 1 Query: 550 VKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDH---KVPRFIRVIINQWLAKVLFITPP----DSICTISTKASKKPPVIIDK--------TIYNSKVSHSLLANVLELSSDTHNI-----------YQDLFKKRKSLSEFETSV-------------------------DDAVNGDCQNV--------------EDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 V++++ G Y+PPG+ KS+C +DV WFPFDVQ+C LKFG+W++DG ++L + + + Y +GEW+LI +R Y CC+ + DV T+++ RR YY N +LPC++ISA+ALL FLLP+++GEKISLG+T++LSL++F LL+A+ MP +S S+PL+ YF S +++ S++ TV+VL CHH+D +P ++RV++ W A +L + P S + A KPP + + + + H+ N + HN Y F + S T+ +D+ C N+ E C L L +V ++ +++ D EW+FAA VIDR C+I F+++ T I SA +F Sbjct: 12 TSVLVNHTGGCQYIPPGILKSSCKIDVRWFPFDVQSCDLKFGSWTHDGWLIDLHL---------------LHADTSGYLPNGEWDLIGVVGKRNELFYECCQEPYTDVTYTLLLRRRTLYYALNLLLPCMLISALALLVFLLPAESGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIGQYFASTLMIVGFSVVVTVLVLQCHHHDPDGTNMPTWVRVLLVHWCAWLLRMKQPVRDARSGGPHGSPAPWKPPCLSEHPGTGADRGQVTTATQPHNHSHNNTRGYTGNHNPDNTYAQSQPLNYSQPFNHTHNHSTTITNTQPHSQPPNHTDNHPIAQPRTAAQHHEDSCCPGCPNIAGAAGGEGGGAARQESPLQSCELAGLLAEV----HYLAERMRAADAGARLGGEWRFAAAVIDRLCLIAFSIVTISSTAAILVSAPSF 437
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Match: chrna2a (cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]) HSP 1 Score: 199.134 bits (505), Expect = 1.759e-56 Identity = 119/317 (37.54%), Postives = 193/317 (60.88%), Query Frame = 1 Query: 325 VLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVI----INQWLAKVLFITPPDS 1254 V + T + D DEKNQ++ T++WL W+DY W+P+EY +T+I V +W+PD++LYN+AD +F + K + + G + + PP ++KS+C++DVT+FPFD QNCT+KFG+W+YD ++L S +V++ Y SGEW ++ + ++Y CC + D+ + +I R +Y N ++PC++IS + +L F LPSD GEKI+L ++++LSL++F LL+ + +P +SL +PL+ Y L M+ TLSI+ TV VLN HH H +PR++R + + +WL V+ PP Sbjct: 1 VRYAEFRTHLCDCDEKNQMMTTNVWLKQEWDDYKLQWDPAEYENVTSIRVPSELIWVPDIVLYNNADGDFAVTHMTKAHLFHTGRVRWKPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDL-------------VSMARDVDLKDYWESGEWAIVHAVGTYNTKKYDCCPQVYPDITYSFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPATHAMPRWVRRVFLDRVPRWL--VMRRPPPQQ 302
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Match: EDO42038 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2N9]) HSP 1 Score: 233.417 bits (594), Expect = 3.481e-69 Identity = 153/498 (30.72%), Postives = 265/498 (53.21%), Query Frame = 1 Query: 229 EKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXX---XVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLN---CHHNDHKVPRFIRVIINQWLAKVLFI---------TPPDSI----CTISTKASKKPPVIIDKTIYNS-KVSHSLLANVLELSSDTHNIY--QDLFKKRKSLSEFET--SVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAF 1650 E RL + LF +NP RPV ++ V V+ G ++ QIIDV EK+QIIKTS W+ IW + WN + YGGI INV P VW PD++LYN+AD + + + ++++S DG ++ P +F S+CT+ + +FPFD Q C+LKFG+W++DG ++LK + + + +GEW+LI + R V RY CC + DV T+ + RR+ ++LFN ++PC +I + L F LP D+GE+IS+ +T +L++++F L++AD +P +S + ++++++ ++ +++L T IVL C + HK+P ++R ++ + L KV + D+I C + K P+I + V + ++ ++ + N+ QD + + + + + ++DD + + + L S E + K LE + + DEE + EWK AA ++D F +F + F Sbjct: 50 EGRLTRDLFA-----GYNPKLRPVFHKRENVTVVLGMSVHQIIDVYEKDQIIKTSFWVRQIWYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKNMWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLDLKPEAPQA-------------SLSKFIPNGEWDLIGAPAIRNVLRYDCCPAPYPDVTFTLHLRRRVLFFLFNLIIPCFVIVVLTSLSFYLPPDSGERISVVITNLLAMTVFMLMVADILPPTSDEVSIISIFYSCSIIEVGIALLGTCIVLKYHFCSTSIHKMPPWVRFLVIECLGKVFCRQEHTNDQEDSKSDTIKLDNCKHKLENGLKDPLIKQCNFFGKFGVRERVRSSGMKTTDGGSNLSMTQDDEGRGRGGTPYSSHRNMDDIIAAEASSNSTVFALLSRQESM---VKNLEILAHAQRCQDEEDREKNEWKLAASILDNFFCWLFLMSIF 526
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Match: EDO45564 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSH5]) HSP 1 Score: 226.483 bits (576), Expect = 6.285e-69 Identity = 128/343 (37.32%), Postives = 203/343 (59.18%), Query Frame = 1 Query: 226 YEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXX---VKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDHKVPRFIRVIINQWLAKVLFITP 1245 +E +L+ LF + DA RPV N+S V V +Q+ID+D KNQI+ + +W+ +W + WNP +YGG+ +INV N VW PD++LYN+ A KVVI DG+ S+ P KS C +D+T+FPFD Q+C + FG+W+Y G +NL + ++ Y SGEWEL S+ + R V +Y+CC+ +IDV TI I R++ +YL N +LPC++++ + + FLLP +GE+ISL +TI+L L++F L+ +++P++S +PL+A Y ++M +S+L T +V+ +H + +P +R I+ LA VL + P Sbjct: 1 WEHKLITTLFKDYQRDA-----RPVYNKSEAVRVSLDIAYSQLIDLDGKNQILSSKVWIRQVWRNPFLSWNPDDYGGLESINVNSNLVWKPDIILYNNIGIGQTGAMYNFDTKVVIDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNL-------------VNARNQSDLSKYTISGEWELKSAPVVRNVVKYSCCKHPYIDVTYTINIRRKVLFYLNNLILPCMVLAILTVCSFLLPPASGERISLVITILLGLTVFMLVFTESVPRTSEVIPLIAKYSFAVMCEVAVSLLLTCVVMRIYHKNSPMPLPMRYIVYNILAPVLRMHP 325
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Match: EDO44896 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUG1]) HSP 1 Score: 229.18 bits (583), Expect = 4.016e-68 Identity = 129/357 (36.13%), Postives = 223/357 (62.46%), Query Frame = 1 Query: 205 RDVNAGS-YEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXX---XXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDHK-----VPRFIRVIINQWLAKVLFITPP 1248 RDVN +E LL L DAH P+ P+ N++ V FG L Q+++VD+KNQII T++W+ W + W+P +YGGIT + + + +W+PD++LYNSA + +V++++DG ++ P F+STC +DVT+FPFD Q C +KFG+W+++ VD+++ ++SS Y +S EW+LI++ +R V+ YACC F DV +T V R+ +Y+FN ++PC+II+ + LL F+LP ++GE+I+L +T++L++++F L A+N+P++S ++P+L ++++++MV LS++ T VL+ HH + VP +++V + +L K+L + P Sbjct: 3 RDVNGSDLHEHTLLGDLLKGYNKDAH-PV--PILNKT-QYMVTFGLELVQLVNVDDKNQIITTNVWVRQRWTNLLLKWDPDKYGGITRVRIDASKIWIPDIVLYNSADSEFSGGLEKYKTRVILNHDGVNAWYSPASFRSTCQIDVTFFPFDQQTCFMKFGSWTFEVVDLDIFADKSPLHSSQ-------------YMKSAEWDLIAASKKRNVEYYACCTYPFSDVTVTWVFRRKPLFYVFNLIVPCLIITGMVLLGFMLPPESGERITLSITVLLAMAVFLQLAAENLPRNSDNVPVLGIFYITVMVEVALSLIATCYVLHIHHKNSGIAVVPVPHWVQVYMLGYLGKILGVKKP 342
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Match: EDO47969 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKU6]) HSP 1 Score: 219.935 bits (559), Expect = 1.796e-66 Identity = 125/349 (35.82%), Postives = 212/349 (60.74%), Query Frame = 1 Query: 229 EKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXX---XXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDH------KVPRFIRVIINQWLAKVLFITPP 1248 E+RL+ L +A RPV N + ++V FG + QI++V+ +NQII+T++W+ W++ W+PS Y G+ + + +VW+PD++LY+SAD+ F+ V+IS DGS ++ P F+STC +DVT+FPFD Q C +KFG+W+Y DV+++ + SS Y +S EW+L+S+ R Q YACC DV + + I R+ +Y FN + PC+I+ + LL F LP ++GE+I+L +T++L++++F L+A+ +P++S S+PLL +++++M +S++ T VLN HH + ++P+++ VI+ +WLA VL + P Sbjct: 1 EQRLISDLLQGYSRNA-----RPVLNSNHTLKVFFGMEIVQIVNVENRNQIIQTNVWIRQRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVDIQASPAPVKSSK-------------YLKSAEWDLMSATTSRKSQIYACCPEPISDVTIAMTIRRKPLFYAFNLITPCMIMLTMILLGFFLPPESGERITLSITVLLAMAVFLQLVAETLPRNSESIPLLGRFYITIMTEIAVSLMATCWVLNIHHRNSGTTLVVEMPKWVDVIVLRWLAVVLCVRQP 331
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Match: EDO32052 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW62]) HSP 1 Score: 217.624 bits (553), Expect = 4.183e-66 Identity = 106/267 (39.70%), Postives = 168/267 (62.92%), Query Frame = 1 Query: 277 HNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXX---VKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQ 1068 + P RPV + PV V G L QIIDVDEKNQI+ T++W+ + W D+ +WNP ++GG+ +INV PN VW PD+LLYN D + KV++S DGS +++ P + K+ C +DV FPFDVQ C LKFG+W++DG+ ++++++ V++ Y+ + EW L + RR V+ Y CC + V T+VI RR +Y++N VLP +I+ ++L F LP ++GE++S +T++LS+S++ +++ +NMPQ Sbjct: 5 YTPEARPVLHVKDPVVVKMGLMLKQIIDVDEKNQILTTNVWIRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPTDLRVESLYKKIDTKVILSSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLR------------KTTGVDIDDYSENREWFLKDAPGRRDVKLYNCCPEPYPTVTFTLVIRRRAMFYVYNMVLPTGMIALLSLFSFYLPPNSGERVSFVITVLLSMSVYMIMVTENMPQ 259
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Match: ENSORLT00000038695.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:101166204]) HSP 1 Score: 326.25 bits (835), Expect = 3.236e-104 Identity = 200/517 (38.68%), Postives = 298/517 (57.64%), Query Frame = 1 Query: 187 SVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSL--SEFETSVDDAVNGD---CQNVEDSGMLCSLHE--------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 S+ L+ + G ++RL L + +NPLERPV N+S + V FG +L QI+DVDEKNQ++ T+IWL + WND++ WN S+Y G+T + + +W PD+LLYNSAD F+A ++++ G+ SY+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++LK+ ++ Y +GEW+L+ +R + Y CC+ ++D+ T+V+ RR YY N +LPC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL HH+D K+P++ RVI+ W A L + P S +K + N+ S SL N N+ + +SL S TS D V + ED +L S H +L K+ ++ +I + ++ DE+ EWKFAA V+DR C++ F+L T GI SA F Sbjct: 36 SLCLYSVVSHQGPNQRRLYSDLMS-----TYNPLERPVYNDSQSLTVHFGLSLLQIMDVDEKNQVLTTNIWLRLYWNDHYLQWNSSDYPGVTNVRFPDHLIWKPDILLYNSADERFDATFHTNILVNSSGTCSYLPPGIFKSTCYIDVRWFPFDVQRCELKFGSWTYGGWSLDLKM---------------LEADVSGYIANGEWDLVEVPGQRNERFYECCDEPYLDITFTVVMRRRTLYYGLNLLLPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAEYFATTMVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDRVRSACDNKTRRSSLTSMDLNAPTSTSLSTN--------GNLLYVGVRGLESLQYSPGATSPDSGVVCGRLITRAGEDEMLLPSSHASSLGNMEMELAKILDEVRYIAKRFRDQDEDESVCNEWKFAASVVDRLCLMAFSLFTILCTIGILMSAPNF 524
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Match: ENSORLT00000046008.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:101166204]) HSP 1 Score: 325.479 bits (833), Expect = 5.121e-104 Identity = 199/510 (39.02%), Postives = 295/510 (57.84%), Query Frame = 1 Query: 214 NAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSL--SEFETSVDDAVNGDCQNV-----EDSGMLCSLHE--------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 + G ++RL L + +NPLERPV N+S + V FG +L QI+DVDEKNQ++ T+IWL + WND++ WN S+Y G+T + + +W PD+LLYNSAD F+A ++++ G+ SY+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++LK+ ++ Y +GEW+L+ +R + Y CC+ ++D+ T+V+ RR YY N +LPC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL HH+D K+P++ RVI+ W A L + P S +K + N+ S SL N N+ + +SL S TS D V C + ED +L S H +L K+ ++ +I + ++ DE+ EWKFAA V+DR C++ F+L T GI SA F Sbjct: 42 HQGPNQRRLYSDLMS-----TYNPLERPVYNDSQSLTVHFGLSLLQIMDVDEKNQVLTTNIWLRLYWNDHYLQWNSSDYPGVTNVRFPDHLIWKPDILLYNSADERFDATFHTNILVNSSGTCSYLPPGIFKSTCYIDVRWFPFDVQRCELKFGSWTYGGWSLDLKM---------------LEADVSGYIANGEWDLVEVPGQRNERFYECCDEPYLDITFTVVMRRRTLYYGLNLLLPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAEYFATTMVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDRVRSACDNKTRRSSLTSMDLNAPTSTSLSTN--------GNLLYVGVRGLESLQYSPGATSPDSGVV--CGRLITRAGEDEMLLPSSHASSLGNMEMELAKILDEVRYIAKRFRDQDEDESVCNEWKFAASVVDRLCLMAFSLFTILCTIGILMSAPNF 521
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Match: ENSORLT00000033785.1 (neuronal acetylcholine receptor subunit alpha-7-like [Source:NCBI gene;Acc:101166204]) HSP 1 Score: 323.553 bits (828), Expect = 6.909e-104 Identity = 195/492 (39.63%), Postives = 288/492 (58.54%), Query Frame = 1 Query: 268 VDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSL--SEFETSVDDAVNGDCQNV-----EDSGMLCSLHE--------DLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 + +NPLERPV N+S + V FG +L QI+DVDEKNQ++ T+IWL + WND++ WN S+Y G+T + + +W PD+LLYNSAD F+A ++++ G+ SY+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++LK+ ++ Y +GEW+L+ +R + Y CC+ ++D+ T+V+ RR YY N +LPC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + MV+ LS++ TV+VL HH+D K+P++ RVI+ W A L + P S +K + N+ S SL N N+ + +SL S TS D V C + ED +L S H +L K+ ++ +I + ++ DE+ EWKFAA V+DR C++ F+L T GI SA F Sbjct: 1 MSTYNPLERPVYNDSQSLTVHFGLSLLQIMDVDEKNQVLTTNIWLRLYWNDHYLQWNSSDYPGVTNVRFPDHLIWKPDILLYNSADERFDATFHTNILVNSSGTCSYLPPGIFKSTCYIDVRWFPFDVQRCELKFGSWTYGGWSLDLKM---------------LEADVSGYIANGEWDLVEVPGQRNERFYECCDEPYLDITFTVVMRRRTLYYGLNLLLPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAEYFATTMVIVGLSVIATVLVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDRVRSACDNKTRRSSLTSMDLNAPTSTSLSTN--------GNLLYVGVRGLESLQYSPGATSPDSGVV--CGRLITRAGEDEMLLPSSHASSLGNMEMELAKILDEVRYIAKRFRDQDEDESVCNEWKFAASVVDRLCLMAFSLFTILCTIGILMSAPNF 467
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Match: ENSORLT00000023459.2 (neuronal acetylcholine receptor subunit alpha-7 [Source:NCBI gene;Acc:101168927]) HSP 1 Score: 311.612 bits (797), Expect = 3.132e-99 Identity = 195/524 (37.21%), Postives = 294/524 (56.11%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVD--------------------DAVNG-DCQNVEDSGMLCS--LHED--------LKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL K L + +NPLERPV N+S + V F +L QI+DVDEKNQ++ T+IWL + W D++ WN S+Y G+T + + +W PD+LLYNSAD F+A+ ++++ G Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ N + Y +GEW+L+ +R+ + Y CC+ + DV T+V+ RR YY NF++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + M + LS++ TV+VL HH+D +P++ RV++ W A L + P +KV LLA HN+ + ++R SLS E S++ V G C + D LC+ + ED L+++ +++ FI + + D+E EWKFAA VIDR C++ F++ T GI SA F Sbjct: 7 GVHQRRLYKEL-----IRNYNPLERPVSNDSHSLTVHFSFSLLQIMDVDEKNQVLTTNIWLQLYWKDFYLQWNMSDYPGVTNVRFPDSQIWRPDILLYNSADERFDASFHTNILVNSSGYCQYLPPGIFKSTCHIDVRWFPFDVQRCDLKFGSWTYGGWSLDLQM---------------INADTTGYIANGEWDLVEVPGQRSERFYDCCKEPYPDVTFTVVMRRRTLYYGLNFLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMAIVGLSVIATVLVLQYHHHDPDGGHMPQWTRVVLLNWCAWFLRMRRPG----------------------EAKV---LLA--------CHNMGK---RQRGSLSSLELSINPVSVPPQPHVTNSNLLYVGFQGVEGLHCGSATDPEPLCARFIEEDFLRVGEVELQQILEEVRFIGQRFRNQDQEKAACSEWKFAAAVIDRLCLVAFSVFTILCTIGILMSAPNF 474
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Match: ENSORLT00000023454.2 (neuronal acetylcholine receptor subunit alpha-7 [Source:NCBI gene;Acc:101168927]) HSP 1 Score: 306.605 bits (784), Expect = 4.026e-97 Identity = 188/512 (36.72%), Postives = 287/512 (56.05%), Query Frame = 1 Query: 220 GSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHND---HKVPRFIRVIINQWLAKVLFITPPD-------------------SICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTF 1689 G +++RL K L + +NPLERPV N+S + V F +L QI+DVDEKNQ++ T+IWL + W D++ WN S+Y G+T + + +W PD+LLYNSAD F+A+ ++++ G Y+PPG+FKSTC +DV WFPFDVQ C LKFG+W+Y G ++L++ N + Y +GEW+L+ +R+ + Y CC+ + DV T+V+ RR YY NF++PC++IS +ALL FLLP+D+GEKISLG+T++LSL++F LL+A+ MP +S S+PL+A YF + M + LS++ TV+VL HH+D +P++ RV++ W A L + P S +S PP + NS + + V L + + L R +F + DS +L +L+++ +++ FI + + D+E EWKFAA VIDR C++ F++ T GI SA F Sbjct: 2 GVHQRRLYKEL-----IRNYNPLERPVSNDSHSLTVHFSFSLLQIMDVDEKNQVLTTNIWLQLYWKDFYLQWNMSDYPGVTNVRFPDSQIWRPDILLYNSADERFDASFHTNILVNSSGYCQYLPPGIFKSTCHIDVRWFPFDVQRCDLKFGSWTYGGWSLDLQM---------------INADTTGYIANGEWDLVEVPGQRSERFYDCCKEPYPDVTFTVVMRRRTLYYGLNFLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFATTMAIVGLSVIATVLVLQYHHHDPDGGHMPQWTRVVLLNWCAWFLRMRRPGEAKVLLACHNMGKRQRGSLSSLELSINPVSVPP---QPHVTNSNLLYVGFQGVEGLHCGSATDPEPLC-ARFIEEDFLRVGGGTRRRQGGVLNDS----ALEVELQQILEEVRFIGQRFRNQDQEKAACSEWKFAAAVIDRLCLVAFSVFTILCTIGILMSAPNF 485
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Match: SMESG000000214.1 (SMESG000000214.1) HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0 Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 1 Query: 493 MPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFSG 1695 MPDVLLYNSADNNFNAANSVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQNVNMNSSNGNDSNIGNVEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQSSLSLPLLALYFLSMMVLSTLSILFTVIVLNCHHNDHKVPRFIRVIINQWLAKVLFITPPDSICTISTKA KKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFSG Sbjct: 1 MPDVLLYNSADNNFNAANSVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQNVNMNSSNGNDSNIGNVEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQSSLSLPLLALYFLSMMVLSTLSILFTVIVLNCHHNDHKVPRFIRVIINQWLAKVLFITPPDSICTISTKALKKPPVIIDKTIYNSKVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAVNGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSAVTFSG 401
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Match: SMESG000068777.1 (SMESG000068777.1) HSP 1 Score: 350.132 bits (897), Expect = 1.817e-113 Identity = 213/521 (40.88%), Postives = 315/521 (60.46%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDG--VDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHH---NDHKVPRFIRVIINQWLAKVLFI---TPPDSICTISTKASKKPPVIIDKTIYNSKVSHS--------LLANVLELSSD--THNIYQDLFKKRKSLSEFETSVDDAVNG-DCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 +F +++ + + G EK+LL++LF+ NR DAHN LERP KN+S PVEV LTQ+IDVDEKNQII T+IWL + W DYHF WNPS YGGI+ + + VW PD+LL+NSAD+ F+ VV+ M +VPPG+FKSTC +D+TWFPFD QNCT+KFG+W+Y G +D+ L+ + + N G + + + Y +GE++++ + R +Y+ ++++ MTI + R+ YY+FN ++PC++IS +ALL+F LP DAGEKISLGVTI+LS++MF LL+AD +PQ+S ++ LL +YF +M + +LSI+FTV+VLN HH N VP I+ I+N WLAKVLF+ + P+ + K +I + N + S ++V ++ SD H I + R S A N + + + C+ +L + +L+ IT KIK++++E KEWKFAA VIDR C+ +F+L T + A Sbjct: 13 AVFWLILISLSEFHCGINEKKLLRYLFDQNRPDAHNILERPSKNDSQPVEVRMKAFLTQLIDVDEKNQIIHTNIWLDLKWKDYHFQWNPSVYGGISGFKIPADRVWKPDLLLFNSADDKFDGTYPTNVVVKNSSLMQWVPPGMFKSTCDIDITWFPFDSQNCTVKFGSWTYSGKYIDLRLQCPDDDDNEKTGVCTETSVINLESYVLNGEFDIVDCPINRL--QYSFNNETYMNILMTIRMQRKPLYYIFNLIIPCVLISTMALLEFTLPPDAGEKISLGVTILLSMTMFLLLVADKLPQTSGAISLLGIYFACIMFMCSLSIVFTVLVLNYHHRSVNLKPVPPLIKKIVNTWLAKVLFMKQNSEPEIRNELFQKNDLGSEMIENGLSVNFEKCRSPIDANSKFTFSHVFDVESDFRVHGIGKSKTSFRLPKVPSYMSFKGAENSIPPKTSKATWPSCNSRHELIAILDELKKITQKIKDDEDEITMAKEWKFAARVIDRCCLTVFSLFIIISTFAVLTRA 531
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Match: SMESG000068777.1 (SMESG000068777.1) HSP 1 Score: 349.747 bits (896), Expect = 3.851e-113 Identity = 213/521 (40.88%), Postives = 315/521 (60.46%), Query Frame = 1 Query: 175 VLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDG--VDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHH---NDHKVPRFIRVIINQWLAKVLFI---TPPDSICTISTKASKKPPVIIDKTIYNSKVSHS--------LLANVLELSSD--THNIYQDLFKKRKSLSEFETSVDDAVNG-DCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 +F +++ + + G EK+LL++LF+ NR DAHN LERP KN+S PVEV LTQ+IDVDEKNQII T+IWL + W DYHF WNPS YGGI+ + + VW PD+LL+NSAD+ F+ VV+ M +VPPG+FKSTC +D+TWFPFD QNCT+KFG+W+Y G +D+ L+ + + N G + + + Y +GE++++ + R +Y+ ++++ MTI + R+ YY+FN ++PC++IS +ALL+F LP DAGEKISLGVTI+LS++MF LL+AD +PQ+S ++ LL +YF +M + +LSI+FTV+VLN HH N VP I+ I+N WLAKVLF+ + P+ + K +I + N + S ++V ++ SD H I + R S A N + + + C+ +L + +L+ IT KIK++++E KEWKFAA VIDR C+ +F+L T + A Sbjct: 28 AVFWLILISLSEFHCGINEKKLLRYLFDQNRPDAHNILERPSKNDSQPVEVRMKAFLTQLIDVDEKNQIIHTNIWLDLKWKDYHFQWNPSVYGGISGFKIPADRVWKPDLLLFNSADDKFDGTYPTNVVVKNSSLMQWVPPGMFKSTCDIDITWFPFDSQNCTVKFGSWTYSGKYIDLRLQCPDDDDNEKTGVCTETSVINLESYVLNGEFDIVDCPINRL--QYSFNNETYMNILMTIRMQRKPLYYIFNLIIPCVLISTMALLEFTLPPDAGEKISLGVTILLSMTMFLLLVADKLPQTSGAISLLGIYFACIMFMCSLSIVFTVLVLNYHHRSVNLKPVPPLIKKIVNTWLAKVLFMKQNSEPEIRNELFQKNDLGSEMIENGLSVNFEKCRSPIDANSKFTFSHVFDVESDFRVHGIGKSKTSFRLPKVPSYMSFKGAENSIPPKTSKATWPSCNSRHELIAILDELKKITQKIKDDEDEITMAKEWKFAARVIDRCCLTVFSLFIIISTFAVLTRA 546
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Match: SMESG000011827.1 (SMESG000011827.1) HSP 1 Score: 347.436 bits (890), Expect = 1.085e-112 Identity = 206/516 (39.92%), Postives = 308/516 (59.69%), Query Frame = 1 Query: 214 NAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACC-ETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHN---DHKVPRFIRVIINQWLAKVLFITPPDSICTISTKASKKPPVIIDKTIYNSKVSHSLL----------ANVLELSSD-THNIYQDLFKKRKSLSEFETSVDDA-VNGDCQNV-----------EDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVIIFTLLAFCVTGGIFFSA 1680 + G + KRLL +LFN ++ HN LERPV +E+ +EV F TL QI+D+DEKNQ++ T+IWL I W DY+F WNP E+G IT + + VW PD+L+YNSAD F+ VV++ G M VPPG+FKSTC +++TWFPFD Q+C +KFGTW+Y G V+ +++ ++ G + L ++GEWE++ + + Y CC E+ FID+K + + R+ YY+FN + PCIIIS ++LL F LP AGEKI++GVTIMLSL+MF ++AD +PQ+S S+PL+ LYF +M++ + S++FTV+VLNCHH D ++P +++V++N+WLA L ++P + ++ ++K + ++I ++HS L N+ SD + N+ K LS T + N +N+ S CS+ +L+ V +L+ IT KI+E + K EWKFAA VIDRFC+I F L + I SA Sbjct: 15 HCGYHGKRLLSYLFNDSKFYGHNSLERPVVDENQSLEVQFKVTLLQILDLDEKNQVMNTNIWLDITWTDYNFKWNPLEFGNITTLILPSEKVWKPDILMYNSADEKFDGTYPANVVVTNQGLMHMVPPGMFKSTCKINITWFPFDQQSCVMKFGTWTYTGDKVDFRLKCDEGSNCTGQYGSADTESFL---KNGEWEIVDVPAEKHTETYPCCPESPFIDIKFHVKMRRKALYYIFNLMTPCIIISTMSLLVFTLPPGAGEKITMGVTIMLSLTMFLFMVADKLPQTSGSVPLIGLYFSCIMIMCSFSVVFTVLVLNCHHKSGEDEEMPYWLKVLVNRWLANFLLMSPRNP--QVTNSPTRKIEIQQRRSIL-PNMNHSFLTYENLAPKPYGNITNRKSDGSTNV-----TSTKRLSHIYTQNNSGKANIGAKNIYKNSYIKPMICNHSATKCSIFTELQDVIHELKQITDKIQEEHFDFKKSNEWKFAARVIDRFCLIGFALFTLISSVVILTSA 519
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Match: SMESG000002905.1 (SMESG000002905.1) HSP 1 Score: 344.739 bits (883), Expect = 1.327e-111 Identity = 199/501 (39.72%), Postives = 296/501 (59.08%), Query Frame = 1 Query: 181 FLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNESLPVEVLFGTTLTQIIDVDEKNQIIKTSIWLSIIWNDYHFHWNPSEYGGITAINVLPNTVWMPDVLLYXXXXXXXXXXXXVKVVISYDGSMSYVPPGLFKSTCTMDVTWFPFDVQNCTLKFGTWSYDGVDVNLKIQXXXXXXXXXXXXXXXXXEMLYYARSGEWELISSDLRRTVQRYACCETDFIDVKMTIVIGRRITYYLFNFVLPCIIISAVALLDFLLPSDAGEKISLGVTIMLSLSMFQLLLADNMPQXXXXXXXXXXXXXXMMVLSTLSILFTVIVLNCHHNDH---KVPRFIRVIINQWLAKVLFITPPDSICT---ISTKASKKPPVIIDKTIYNS-------KVSHSLLANVLELSSDTHNIYQDLFKKRKSLSEFETSVDDAV-----NGDCQNVEDSGMLCSLHEDLKKVKKQLEFITTKIKENDEEGDKLKEWKFAAYVIDRFCVI 1629 F V++ ++ AG EK+LL+HLF+ R DAHN LERP K++ + V L QIIDVDEKNQI+ T++W+ + W DYHF W+P Y IT + + N +W PD+LLYNSAD F+A +V+ YDG M VPPG+FKSTC +++ W+PFD Q C +KFG+W+Y+G ++L N + N ++ +GEW+++S R+V +Y CC +ID+ + I RR YY FN ++PCIIIS +ALL FL+P DAGEKISLGVTI+LSL++F +++A+ MP +S ++PL+ +YF +M++ +LS++FTV+VLN HH VP + ++N WLA++LF+ P + + + S + IYN K S SLLANVL D N + S S +V+ V + + G+L +K++ L +T+K+ E + + + EWKFAA V+DRFC++ Sbjct: 7 FFFVLVIAKESFAGKAEKKLLRHLFDNKRTDAHNILERPAKDDKKSLAVYILIFLMQIIDVDEKNQILHTNVWIDLKWTDYHFVWDPIAYNNITTLVIPANRLWRPDILLYNSADERFDATFPANIVVKYDGEMHTVPPGMFKSTCQINIKWYPFDTQKCKMKFGSWTYEGNLIDLLFFCDNATTCNQTFGKGNAENIM---ENGEWDVLSFKAIRSVDKYPCCPETYIDISYYLEIKRRTLYYTFNLIVPCIIISTMALLGFLIPPDAGEKISLGVTILLSLTVFLMMVAEKMPPTSKAIPLIGMYFTCVMIVCSLSLVFTVLVLNFHHRSSDSIDVPESLHKVVNIWLARILFMKPRNKVASEVFESGDLKQNTGQFKRNAIYNRAFQSGSMKGSKSLLANVL----DMENEIWARAAQSVSFSYPSANVNSEVPPYESQNNNGGIMGEGLLPEGRSQIKEILSHLRQVTSKLAETEIQELRANEWKFAARVMDRFCLV 500 The following BLAST results are available for this feature:
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Nicotinic acetylcholine receptor alpha 6 subunit vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30021693 ID=SMED30021693|Name=Nicotinic acetylcholine receptor alpha 6 subunit|organism=Schmidtea mediterranea sexual|type=transcript|length=1830bpback to top protein sequence of SMED30021693-orf-1 >SMED30021693-orf-1 ID=SMED30021693-orf-1|Name=SMED30021693-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=513bp MNTLNVLFLSVILFFRDVNAGSYEKRLLKHLFNPNRVDAHNPLERPVKNEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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