Homeobox domain-containing protein

Overview


Name	Homeobox domain-containing protein
Smed ID	SMED30021669
Length (bp)	1278

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Homeobox domain-containing protein (SMED30021669) t-SNE clustered cells

Violin plots show distribution of expression levels for Homeobox domain-containing protein (SMED30021669) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Homeobox domain-containing protein (SMED30021669) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Homeobox domain-containing protein (SMED30021669) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30021669

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 26

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
posterior region of the whole animal	SMED30021669	h1SMcG0009117	dd_Smed_v4_16227_0_1	dd_Smed_v4	PMID:27063937 Scimone et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	dd_Smed_v4_16227_0_1	dd_Smed_v4	PMID:27063937 Scimone et al., 2016
tail region	SMED30021669	h1SMcG0009117	dd_Smed_v4_16227_0_1	dd_Smed_v4	PMID:27063937 Scimone et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	Smed-Lox5a	smed_ncbi_20240424	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
prepharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
prepharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
tail region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
tail region	SMED30021669	h1SMcG0009117	SmedASXL_066865	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior region of the whole animal	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
prepharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
prepharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
tail region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
tail region	SMED30021669	h1SMcG0009117	SmedASXL_008764	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
posterior side	SMED30021669	h1SMcG0009117	dd_Smed_v4_16227_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior muscle cell	SMED30021669	h1SMcG0009117	dd_Smed_v4_16227_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
tail region	SMED30021669	h1SMcG0009117	dd_Smed_v6_16227_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
tail region	SMED30021669	h1SMcG0009117	dd_Smed_v6_13919_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: HOXB7 (homeobox B7 [Source:HGNC Symbol;Acc:HGNC:5118])

HSP 1 Score: 132.88 bits (333), Expect = 6.054e-36
Identity = 70/121 (57.85%), Postives = 81/121 (66.94%), Query Frame = 3

Query:  780 ICPSMSNNFESS-NSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP  S     +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K  GPG+  Q
Sbjct:   99 VCPGDSAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGTDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKEN---KTAGPGTTGQ 206

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BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: HOXA7 (homeobox A7 [Source:HGNC Symbol;Acc:HGNC:5108])

HSP 1 Score: 127.487 bits (319), Expect = 1.070e-33
Identity = 68/120 (56.67%), Postives = 81/120 (67.50%), Query Frame = 3

Query:  750 SAYSQNCRHLICPSMSNNFESSNSKPSD---INGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEH 1100
            ++Y QN      P + ++        +D   ++G + AN   +Y WM   SG D       KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKEH
Sbjct:   83 ASYDQNI-----PGLCSDLAKGACDKTDEGALHGAAEAN-FRIYPWMR-SSGPDR------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 189

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BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: HOXA6 (homeobox A6 [Source:HGNC Symbol;Acc:HGNC:5107])

HSP 1 Score: 122.865 bits (307), Expect = 5.506e-32
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 3

Query:  867 LYSWMNPK-SGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCD 1136
            +Y WM    S A     S+ +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIA++L LTERQIKIWFQNRRMKWKKE+ +   T P   D
Sbjct:  136 VYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226

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BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: HOXB8 (homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119])

HSP 1 Score: 122.479 bits (306), Expect = 1.001e-31
Identity = 65/148 (43.92%), Postives = 86/148 (58.11%), Query Frame = 3

Query:  765 NCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEK 1208
            +C+      +    E S   PS            L+ WM P++ A        +R RQTY+R+QTLELEKEF FN YLTR+RRIE++H+L LTERQ+KIWFQNRRMKWKKE+N  K   P S  + E  +K  + R    + E + +K
Sbjct:  109 DCKLAAASGLGEEAEGSEQSPSP---------TQLFPWMRPQAAA------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF--PSSKCEQEELEKQKLERAPEAADEGDAQK 239

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BLAST of Homeobox domain-containing protein vs. Ensembl Human
Match: HOXB8 (homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119])

HSP 1 Score: 120.939 bits (302), Expect = 4.232e-31
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 3

Query:  765 NCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEK 1208
            +C+      +    E S   PS            L+ WM P++       +  +R RQTY+R+QTLELEKEF FN YLTR+RRIE++H+L LTERQ+KIWFQNRRMKWKKE+N  K   P S  + E  +K  + R    + E + +K
Sbjct:  109 DCKLAAASGLGEEAEGSEQSPSP---------TQLFPWMRPQA-------AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF--PSSKCEQEELEKQKLERAPEAADEGDAQK 238

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BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: lin-39 (Homeobox protein lin-39 [Source:UniProtKB/Swiss-Prot;Acc:P34684])

HSP 1 Score: 109.768 bits (273), Expect = 2.401e-27
Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = 3

Query:  831 DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGP 1124
            D++ NS      +Y WM  +  +    S   KR R  YTR+Q LELEKEFH +KYLTR+RRIE+AHSL+LTERQ+KIWFQNRRMK KKE+    +T P
Sbjct:  139 DMDKNSGG---AVYPWMT-RVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDKPMTPP 232

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Query:  831 DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGP 1124
            D++ NS      +Y WM  +  +    S   KR R  YTR+Q LELEKEFH +KYLTR+RRIE+AHSL+LTERQ+KIWFQNRRMK KKE+    +T P
Sbjct:  139 DMDKNSGG---AVYPWMT-RVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDKPMTPP 232

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BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: mab-5 (Homeobox protein mab-5 [Source:UniProtKB/Swiss-Prot;Acc:P10038])

HSP 1 Score: 101.679 bits (252), Expect = 6.365e-25
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDK 1157
            ++ WM  K G      S  KRTRQTY+R QTLELEKEFH++KYLTR+RR EI+ +L LTERQ+KIWFQNRRMK KKE   AK  G GS +  E S++
Sbjct:  103 VFPWM--KMGGAKGGES--KRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKE---AKGEG-GSNESDEESNQ 191

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BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Match: php-3 (Posterior Hox gene Paralog [Source:UniProtKB/TrEMBL;Acc:Q9XW88])

HSP 1 Score: 80.4925 bits (197), Expect = 7.586e-17
Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 3

Query:  924 KRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            ++ R+ YT+ QTLELEKEF +N Y+++++R E+A  L LTERQ+KIWFQNRRMK KK+
Sbjct:  200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQ 257

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Query:  924 KRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            ++ R+ YT+ QTLELEKEF +N Y+++++R E+A  L LTERQ+KIWFQNRRMK KK+
Sbjct:  200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQ 257

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BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: Antp (gene:FBgn0260642 transcript:FBtr0081653)

HSP 1 Score: 129.028 bits (323), Expect = 2.579e-33
Identity = 69/127 (54.33%), Postives = 80/127 (62.99%), Query Frame = 3

Query:  786 PSMSNNFESSNSKPS-DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS-CDQIEASDKP 1160
            P M       ++ PS + N  S+     LY WM  + G         KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+      G G   D+I   + P
Sbjct:  242 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFG----KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 364

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BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: Antp (gene:FBgn0260642 transcript:FBtr0081650)

HSP 1 Score: 129.028 bits (323), Expect = 2.579e-33
Identity = 69/127 (54.33%), Postives = 80/127 (62.99%), Query Frame = 3

Query:  786 PSMSNNFESSNSKPS-DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS-CDQIEASDKP 1160
            P M       ++ PS + N  S+     LY WM  + G         KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+      G G   D+I   + P
Sbjct:  242 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFG----KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 364

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BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: Antp (gene:FBgn0260642 transcript:FBtr0081647)

HSP 1 Score: 129.028 bits (323), Expect = 3.032e-33
Identity = 69/127 (54.33%), Postives = 80/127 (62.99%), Query Frame = 3

Query:  786 PSMSNNFESSNSKPS-DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS-CDQIEASDKP 1160
            P M       ++ PS + N  S+     LY WM  + G         KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+      G G   D+I   + P
Sbjct:  255 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFG----KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 377

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BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: Antp (gene:FBgn0260642 transcript:FBtr0081652)

HSP 1 Score: 129.028 bits (323), Expect = 3.032e-33
Identity = 69/127 (54.33%), Postives = 80/127 (62.99%), Query Frame = 3

Query:  786 PSMSNNFESSNSKPS-DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS-CDQIEASDKP 1160
            P M       ++ PS + N  S+     LY WM  + G         KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+      G G   D+I   + P
Sbjct:  255 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFG----KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 377

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BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Match: Antp (gene:FBgn0260642 transcript:FBtr0081654)

HSP 1 Score: 129.028 bits (323), Expect = 3.032e-33
Identity = 69/127 (54.33%), Postives = 80/127 (62.99%), Query Frame = 3

Query:  786 PSMSNNFESSNSKPS-DINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS-CDQIEASDKP 1160
            P M       ++ PS + N  S+     LY WM  + G         KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+      G G   D+I   + P
Sbjct:  255 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFG----KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSP 377

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BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: hoxb7a (homeobox B7a [Source:NCBI gene;Acc:58044])

HSP 1 Score: 129.028 bits (323), Expect = 1.480e-34
Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 3

Query:  849 NANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQI 1142
            N NN+ +Y WM   +GAD       KR RQTY+R+QTLELEKEFHFN+YL+RRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+       P + DQI
Sbjct:  128 NENNLRIYPWMRS-TGADR------KRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSTDRCSPAA-DQI 217

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BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: hoxc6a (homeobox C6a [Source:NCBI gene;Acc:30346])

HSP 1 Score: 125.946 bits (315), Expect = 1.416e-33
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 3

Query:  801 NFESSNSKPSDINGNSNANNVMLYSWM---NPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS 1130
            N E + +   D      ANN+ +Y WM   N  SG      S+ +R RQ Y+R+QTLELEKEFHFN+YLTRRRRIEIA++L LTERQIKIWFQNRRMKWKKE N+   T PG+
Sbjct:   82 NLEQARAGTQD----QKANNIQIYPWMQRMNSHSGVGY--GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKETNLTS-TVPGT 187

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BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: hoxb6a (homeobox B6a [Source:NCBI gene;Acc:30341])

HSP 1 Score: 124.02 bits (310), Expect = 1.103e-32
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +Y WM   +  +    +  +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  132 VYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKL 211

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BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Match: hoxb6b (homeobox B6b [Source:NCBI gene;Acc:58053])

HSP 1 Score: 123.25 bits (308), Expect = 1.865e-32
Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEH---NIAKLT 1118
            +Y WM   +  +    S  +R RQTYTR QTLELEKEFHFN+YLTRRRRIEI+H+L LTERQIKIWFQNRRMKWKKE+   N AK++
Sbjct:  129 VYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKAVNSAKVS 215

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Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEH---NIAKLT 1118
            +Y WM   +  +    S  +R RQTYTR QTLELEKEFHFN+YLTRRRRIEI+H+L LTERQIKIWFQNRRMKWKKE+   N AK++
Sbjct:  129 VYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKAVNSAKVS 215

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BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: HOXB7 (homeobox B7 [Source:NCBI gene;Acc:100494663])

HSP 1 Score: 131.724 bits (330), Expect = 1.821e-35
Identity = 69/118 (58.47%), Postives = 84/118 (71.19%), Query Frame = 3

Query:  750 SAYSQNCRHLICPS--MSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            S + QN   L+CP+     N   +  + S++ G++N   + +Y WM   +GAD       KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE
Sbjct:   88 SPFEQNL-SLMCPTDPSKQNGTKAEQRDSELQGDTN---LRIYPWMR-STGADR------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 194

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BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: zdhhc15 (zinc finger DHHC-type containing 15 [Source:Xenbase;Acc:XB-GENE-948859])

HSP 1 Score: 127.872 bits (320), Expect = 8.479e-34
Identity = 67/128 (52.34%), Postives = 84/128 (65.62%), Query Frame = 3

Query:  789 SMSNNFESSNSKPSDINGNSNANNVMLYSWM---NPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKL--TGPGSCDQIEASDK 1157
            S++ +F S  S+    NG     ++ +Y WM   N  SG      ++ +R RQ Y+R+QTLELEKEFHFN+YLTRRRRIEIA++L LTERQIKIWFQNRRMKWKKE N+      G G+     A DK
Sbjct:   99 SLAQDFSSEQSRG---NGQEQKGSIQIYPWMQRMNSHSGVGY--GADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGTGAAADSLAGDK 221

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BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: cd276 (CD276 molecule [Source:Xenbase;Acc:XB-GENE-921537])

HSP 1 Score: 126.716 bits (317), Expect = 8.492e-34
Identity = 90/214 (42.06%), Postives = 116/214 (54.21%), Query Frame = 3

Query:  594 TSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDES----------YLSSVPHLATSQ-----FSAYS--QNCRHLICPSMSNNF-----ESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTIS 1169
            TS ++ S + +   + +  FPNP  +    P  L+ +            + SSVP L  S      F AYS   +  +L C S   N      E   ++ + ++  ++++   +Y WM   SG D       KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKEH       P   D  E S  PT +
Sbjct:    2 TSSYYVSALFSKYTAGASLFPNPEST----PCSLASNSQRGGYGTGTGPFPSSVPSLYNSPLYQNPFPAYSLASDSYNLHCSSFDQNIPLLCNELPKAEEAALHQQADSH-FRIYPWMR-SSGPDR------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEESGQTP---DAGEDSTAPTTT 200

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BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: HOXD4 (homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138])

HSP 1 Score: 124.02 bits (310), Expect = 2.036e-32
Identity = 77/201 (38.31%), Postives = 102/201 (50.75%), Query Frame = 3

Query:  585 KVPTSDHF--GSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLS----SVPHLATSQFSAYSQNCR-------------HLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNP-KSGADNPNSSNN--KRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTG 1121
            K P  + +  GS++A      S  F  P+  + + PH   +  S+ S    S  H   S      Q                H   P+  ++  + + +    NG+      ++Y WM      + NPN +    KR+R  YTR Q LELEKEFHFN+YLTRRRRIEIAHSL L+ERQIKIWFQNRRMKWKK+H +    G
Sbjct:   16 KFPPCEEYMQGSYLAEQ---GSDFFSPPAQGAEYQPHQGIYGRSHYSDESFSCSHAQGSALQPRGQTQEPSGPPEPFPAAEEHCPAPANLSSSRACSQQQHPKNGSLGKPPAIVYPWMKKVHCNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKG 213

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BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Match: HOXB6 (homeobox B6 [Source:NCBI gene;Acc:100124320])

HSP 1 Score: 120.939 bits (302), Expect = 2.438e-31
Identity = 65/103 (63.11%), Postives = 74/103 (71.84%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSS----NNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPT 1163
            +Y WM      ++ NSS    + +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAHSL LTERQIKIWFQNRRMKWKKE   +KL         E  +KPT
Sbjct:  126 VYPWMQR---MNSCNSSVFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKE---SKLLNSSVQSAGEDEEKPT 222

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BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Hoxb7 (homeobox B7 [Source:MGI Symbol;Acc:MGI:96188])

HSP 1 Score: 131.339 bits (329), Expect = 1.799e-35
Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 3

Query:  780 ICPS-MSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP   +    +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K +GPG+  Q
Sbjct:   99 VCPGDPAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGPDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKEN---KTSGPGTTGQ 206

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Hoxa7 (homeobox A7 [Source:MGI Symbol;Acc:MGI:96179])

HSP 1 Score: 126.716 bits (317), Expect = 1.459e-33
Identity = 60/78 (76.92%), Postives = 64/78 (82.05%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEH 1100
            +Y WM   SG D       KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKEH
Sbjct:  118 IYPWMR-SSGPDR------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 188

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Hoxa6 (homeobox A6 [Source:MGI Symbol;Acc:MGI:96178])

HSP 1 Score: 120.553 bits (301), Expect = 2.567e-31
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 3

Query:  867 LYSWMNPK-SGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +Y WM    S A     S+ +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIA++L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  135 VYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKL 215

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BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Match: Hoxb6 (homeobox B6 [Source:MGI Symbol;Acc:MGI:96187])

HSP 1 Score: 120.168 bits (300), Expect = 3.164e-31
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPN-SSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +Y WM   +  ++ +   + +R RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE  +
Sbjct:  127 VYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKL 207

[Close]

Query:  867 LYSWMNPKSGADNPN-SSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +Y WM   +  ++ +   + +R RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE  +
Sbjct:  127 VYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKL 207

[Close]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9TT89|HXB7_BOVIN (Homeobox protein Hox-B7 OS=Bos taurus OX=9913 GN=HOXB7 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.979e-35
Identity = 70/121 (57.85%), Postives = 82/121 (67.77%), Query Frame = 3

Query:  780 ICPSMSNNFESS-NSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP  S     +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K +GPG+  Q
Sbjct:   99 VCPGDSAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGTDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN---KTSGPGTTGQ 206

[Close]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|P09629|HXB7_HUMAN (Homeobox protein Hox-B7 OS=Homo sapiens OX=9606 GN=HOXB7 PE=1 SV=4)

HSP 1 Score: 132.88 bits (333), Expect = 2.907e-35
Identity = 70/121 (57.85%), Postives = 81/121 (66.94%), Query Frame = 3

Query:  780 ICPSMSNNFESS-NSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP  S     +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K  GPG+  Q
Sbjct:   99 VCPGDSAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGTDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKEN---KTAGPGTTGQ 206

[Close]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|A1YFA5|HXB7_GORGO (Homeobox protein Hox-B7 OS=Gorilla gorilla gorilla OX=9595 GN=HOXB7 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.938e-35
Identity = 70/121 (57.85%), Postives = 81/121 (66.94%), Query Frame = 3

Query:  780 ICPSMSNNFESS-NSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP  S     +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K  GPG+  Q
Sbjct:   99 VCPGDSAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGTDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN---KTAGPGTTAQ 206

[Close]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|P04476|HXB7B_XENLA (Homeobox protein Hox-B7-B OS=Xenopus laevis OX=8355 GN=hoxb7-b PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 5.139e-35
Identity = 87/189 (46.03%), Postives = 106/189 (56.08%), Query Frame = 3

Query:  567 WPVSLTKVPTSDHFGSFIANNLYSNS--KTFPNPSWS-------SHFHPHDLSFDESYLSSVPHLATS---QFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            +P  +    TS  F S    + Y NS   TFP  S +       S  HP   +    Y SS    A S     S + QN   L+C     N   +  + S+++   N  N+ +Y WM   +G+D       KR RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE
Sbjct:   21 FPSGVFSEQTSCAFASSPQRSGYGNSPGGTFPAGSAAHGLFSNGSSLHPQSPAM---YPSSYGLDAASFNMHCSPFEQNLSSLMCDPTKQNCTKAEQRDSELH---NEANLRIYPWMR-SAGSDR------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 196

[Close]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Match: sp|P09024|HXB7_MOUSE (Homeobox protein Hox-B7 OS=Mus musculus OX=10090 GN=Hoxb7 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.258e-34
Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 3

Query:  780 ICPS-MSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ 1139
            +CP   +    +   + SD+   SN     +Y WM   SG D       KR RQTYTR+QTLELEKEFH+N+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+   K +GPG+  Q
Sbjct:   99 VCPGDPAKAAGAKEQRDSDLAAESN---FRIYPWMR-SSGPDR------KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKEN---KTSGPGTTGQ 206

[Close]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A1S6KMI0 (Homeobox domain-containing protein (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 1.200e-131
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 3

Query:  435 MQVDQNIQNPFQTSSNKXXXXXXXXXXXXXXXXXXNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQI 1055
            MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQI
Sbjct:    1 MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQI 207

[Close]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: A0A159X4F7 (HOXB7-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 2.159e-120
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 3

Query:  435 MQVDQNIQNPFQTSSNKXXXXXXXXXXXXXXXXXXNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRR 1013
            MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRR
Sbjct:    1 MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRR 193

[Close]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: Q9XY02 (PLOX5-Dj (Fragment) OS=Dugesia japonica OX=6161 GN=Plox5-Dj PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 7.144e-114
Identity = 203/289 (70.24%), Postives = 221/289 (76.47%), Query Frame = 3

Query:  444 DQNIQNPFQTSSNKXXXXXXXXXXXXXXXXXXNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFD-----------ESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANN-----------------VMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEKCENEPN 1226
            D N  NPFQ ++NKLSTSRS +H S S+  KSN   GIGRYWP S  KV ++DHFGS IA+NLYSNSK F +  WSSHF  +DL  D           ESYL+SVPHL  SQF +YSQNCRHLI PS+ NNFE++NSK S+ING S  NN                 VM YSWMNPKS  DNPN+SNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEAS+KPTISR STISPE EIEKC+NE N
Sbjct:    1 DPNAPNPFQNTTNKLSTSRSAIHQSISNFSKSNQVPGIGRYWPTSFPKVSSNDHFGSLIASNLYSNSKMFSHSPWSSHFPSNDLPLDGSLIDSKRSHNESYLNSVPHLVNSQFPSYSQNCRHLIYPSI-NNFENTNSKSSEINGTSTNNNNNNNNNNNNNNNNNNNNVMFYSWMNPKSNTDNPNNSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASEKPTISRSSTISPEHEIEKCDNEQN 288

[Close]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: O76937 (Homeodomain protein OS=Girardia tigrina OX=6162 GN=DthoxC PE=4 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.637e-101
Identity = 173/257 (67.32%), Postives = 199/257 (77.43%), Query Frame = 3

Query:  435 MQVDQNIQNPFQTSSNKXXXXXXXXXXXXXXXXXXNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFD-----------ESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISR 1172
            M VD N+ NP Q S +KL +S+S+ H   S+L KS+    IGRYWP S++KV +S+HFGS IA N YSNSK FPN  WS+HF  +DL+FD           ESYL++VPH ++SQFS YSQ CR LI PS+S  +ESS SK SDIN N  +NNVMLYSWMNPKS  DN N++NNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAH+LILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ+E      IS+
Sbjct:    1 MHVDPNVPNPLQNSPSKLLSSKSSNHLPLSNLSKSSQIPAIGRYWPASISKVSSSEHFGSLIATNFYSNSKVFPNSPWSTHFPANDLAFDSSVFDSRRPHEESYLNAVPHFSSSQFSPYSQTCRQLIYPSIST-YESSESKISDININPVSNNVMLYSWMNPKSSGDNTNNTNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHTLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQLELVKTYNISQ 256

[Close]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Match: T1E1D4 (PLOX5 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.989e-58
Identity = 114/227 (50.22%), Postives = 150/227 (66.08%), Query Frame = 3

Query:  546 SAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHP--HDLSFDE------SYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVM-LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQE 1199
            ++ + RYWP        +D+ G  IANN Y + K FP+ ++ +   P  +   FD       SY S   H + SQ   Y  + ++ +C   ++  +S  S  ++ +   ++++ + LYSWMNPK+  D  +   NKRTRQTYTR QTLELEKEFH+NKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQ++  D    SR +TI+P+Q+
Sbjct:   29 TSSLARYWPSP------TDYLGPLIANNFYPHRKLFPHSAYLNQDIPSFNSPGFDPRRPQVPSYRS---HFSPSQI--YQNSFKNNVCLPDADVIDSKASLDNNSSIVYSSSSNVPLYSWMNPKTSNDKGSKFENKRTRQTYTRFQTLELEKEFHYNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQVDLLDTVPASRSTTITPDQD 244

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: hoxb7a (homeobox B7 [Source:NCBI gene;Acc:103045369])

HSP 1 Score: 129.798 bits (325), Expect = 8.474e-35
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 3

Query:  849 NANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS 1130
            N +N+ +Y WM   +GAD       KR RQTY+R+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+  A  + P +
Sbjct:  130 NEDNLRIYPWMR-STGADR------KRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTAHPSSPAA 216

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: hoxb6a (homeobox protein Hox-B6a [Source:NCBI gene;Acc:103045875])

HSP 1 Score: 124.02 bits (310), Expect = 8.607e-33
Identity = 65/119 (54.62%), Postives = 80/119 (67.23%), Query Frame = 3

Query:  759 SQNCRHLIC--PSMSNNF-ESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            SQ+ R   C  PSM + + E  + KP+            +Y WM   +  +    +  +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  101 SQDHRKTDCTGPSMKSIYNEVDDQKPT----------APVYPWMQRMNSCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKL 209

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: hoxb6b (homeobox protein Hox-B6b [Source:NCBI gene;Acc:103030519])

HSP 1 Score: 122.865 bits (307), Expect = 2.172e-32
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +Y WM   +  +    +  +R RQTYTR QTLELEKEFHFN+YLTRRRRIEI+H+L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  121 VYPWMQRMNSCNGIPGNTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKV 200

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: hoxc6a (homeobox C6 [Source:NCBI gene;Acc:103034651])

HSP 1 Score: 121.709 bits (304), Expect = 9.003e-32
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 3

Query:  804 FESSNSKPSDINGNSNANNVMLYSWM---NPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI-AKLTG 1121
             E + S   D  GN     + +Y WM   N  SG      S+ +R RQ Y+R+QTLELEKEFHFN+YLTRRRRIEIA++L LTERQIKIWFQNRRMKWKKE N+ + +TG
Sbjct:  106 LEQARSGTQDQKGN-----IQIYPWMQRMNSHSGVGY--GSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTVTG 208

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000047341.1 (homeobox C4 [Source:NCBI gene;Acc:103034018])

HSP 1 Score: 121.709 bits (304), Expect = 1.986e-31
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 3

Query:  816 NSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNN----KRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
             + P   N  ++A   ++Y WM  K      NSS N    KR+R  YTR Q LELEKEFH+N+YLTRRRRIEIAHSL+L+ERQIKIWFQNRRMKWKK+H +
Sbjct:  117 QATPEHPNSAASAKQPVVYPWMK-KIHVSTVNSSYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRL 216

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: hoxb7a (homeobox B7a [Source:NCBI gene;Acc:58044])

HSP 1 Score: 112.079 bits (279), Expect = 7.354e-31
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 3

Query:  918 NNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            + KR RQTY+R+QTLELEKEFHFN+YLTRRRR+EIAHSL LTERQIKIWFQNRRMKWKKE
Sbjct:    3 DGKRGRQTYSRYQTLELEKEFHFNRYLTRRRRVEIAHSLCLTERQIKIWFQNRRMKWKKE 62

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: hoxd4a (homeobox D4a [Source:NCBI gene;Acc:30329])

HSP 1 Score: 109.383 bits (272), Expect = 1.255e-29
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 3

Query:  918 NNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
             +KR+R  YTR Q LELEKEFHFN+YLTRRRRIEIAHSL L+ERQIKIWFQNRRMKWKK+H +
Sbjct:    1 ESKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHKL 63

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005057.1 (pep scaffold:Pmarinus_7.0:GL483321:9136:13526:-1 gene:ENSPMAG00000004598.1 transcript:ENSPMAT00000005057.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 105.145 bits (261), Expect = 4.263e-28
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 3

Query:  867 LYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKL 1115
            ++ WM P+  A        +R RQTY+R+QTLELEKEF FN YLTR+RRIE++H L L+ERQ+KIWFQNRRMKWKKE+N  K 
Sbjct:   16 VFPWMRPQGPA-------RRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHVLGLSERQVKIWFQNRRMKWKKENNRDKF 91

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011116.1 (pep scaffold:Pmarinus_7.0:GL482944:7995:8174:-1 gene:ENSPMAG00000010089.1 transcript:ENSPMAT00000011116.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 100.908 bits (250), Expect = 8.051e-27
Identity = 45/58 (77.59%), Postives = 55/58 (94.83%), Query Frame = 3

Query:  924 KRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            ++ R++Y+RHQ+LELEKEFHFN+YL RRRR+EIAHSL L+ERQ+KIWFQNRRMKWKKE
Sbjct:    2 RKGRRSYSRHQSLELEKEFHFNRYLARRRRVEIAHSLCLSERQVKIWFQNRRMKWKKE 59

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000011449.1 (pep scaffold:Pmarinus_7.0:GL493006:3300:3479:1 gene:ENSPMAG00000010422.1 transcript:ENSPMAT00000011449.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 83.5741 bits (205), Expect = 1.576e-20
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 3

Query:  942 YTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKK 1094
            YT+HQTLELEKEF F+ YLTR RR+EI+H L LT+RQ+KIWFQNRRMK KK
Sbjct:    8 YTKHQTLELEKEFLFSMYLTRERRLEISHLLSLTDRQVKIWFQNRRMKLKK 58

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Yeast
Match: PHO2 (Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000002264])

HSP 1 Score: 46.2098 bits (108), Expect = 7.572e-6
Identity = 30/93 (32.26%), Postives = 52/93 (55.91%), Query Frame = 3

Query:  882 NPKSGADNPNSSNNKRTRQTYTRHQTLE-LEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKW-KKEHNIAKLTGPGSCDQIEASD 1154
            N  S + N + S  +R ++T  + + L+ L+++F  N   +   R +I+  + + E+ ++IWFQNRR K  KK+H   K T P S  +  A+D
Sbjct:   63 NDMSASSNASDSGPQRPKRTRAKGEALDVLKRKFEINPTPSLVERKKISDLIGMPEKNVRIWFQNRRAKLRKKQHGSNKDTIPSSQSRDIAND 155

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: HOX6 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S277])

HSP 1 Score: 97.0561 bits (240), Expect = 6.055e-23
Identity = 53/102 (51.96%), Postives = 64/102 (62.75%), Query Frame = 3

Query:  885 PKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISP 1190
            P+    NP+ S  KR   T+T+ Q +ELEKEFHF+KYLTR RRIEIA +L LTE QIKIWFQNRRMKWK+E             Q  A+ +PT    S + P
Sbjct:  143 PEEKEQNPSPSQKKRF--TFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFK--------DSLQKPANGEPTYQNSSFVQP 234

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: ANTHOX1A.NV (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGM8])

HSP 1 Score: 91.2781 bits (225), Expect = 6.041e-22
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 3

Query:  927 RTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            R R  YTR Q LELEKEFHF +YLT+ RR E+A  L LTERQ+KIWFQNRRMKWKK+
Sbjct:   81 RKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKKD 137

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: ANTHOX7 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S272])

HSP 1 Score: 92.4337 bits (228), Expect = 1.374e-21
Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = 3

Query:  867 LYSWM-NPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGS 1130
            +Y WM   KSG+      + KR R +YT  Q LELEKEFH+NKYL   RR E+A+++ LTERQ+K+WFQNRRMK KK+    K  GP +
Sbjct:   80 IYPWMRTKKSGSRGIGGKHTKRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKKDEK-QKEDGPSA 167

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: EDO45896 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRW6])

HSP 1 Score: 86.2705 bits (212), Expect = 2.801e-21
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 3

Query:  933 RQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            R  Y+  Q +ELEKEFH+N+YL R RRIEIA SL LTE+Q+KIWFQNRRMKWKKE+ +
Sbjct:    5 RTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQVKIWFQNRRMKWKKENKL 62

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Match: MOXB (MoxB; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR28])

HSP 1 Score: 86.6557 bits (213), Expect = 6.506e-21
Identity = 52/103 (50.49%), Postives = 60/103 (58.25%), Query Frame = 3

Query:  864 MLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWK--KEHNIAKLTGPGSCDQIEASDKPTI 1166
            MLY   +PKS     N    ++ R  +T+HQ  ELE EF  N YLTR RR EIA SL LTERQ+K+WFQNRRMKWK  K     K   P   +Q E SD   I
Sbjct:    1 MLYV-SDPKSAK---NLGKKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRVKGKRPEKKPAPEDSNQDEKSDSEDI 99

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000021318.2 (homeobox protein Hox-B6a [Source:NCBI gene;Acc:101155275])

HSP 1 Score: 125.176 bits (313), Expect = 7.941e-33
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 3

Query:  843 NSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            +  A +  +Y WM   +  +    S  +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  148 DKQAASTPIYPWMQRMNACNGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKL 235

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: hoxb6b (homeobox protein Hox-B6b [Source:NCBI gene;Acc:101164012])

HSP 1 Score: 124.02 bits (310), Expect = 1.827e-32
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = 3

Query:  771 RHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGAD-NPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            R   CP      E + S  S I+  S+    ++Y WM   +     P  ++ +R RQTYTR+QTLELEKEFHFN+YLTRRRRIEI+H+L LTERQIKIWFQNRRMKWKKE+ +
Sbjct:  131 RKAECP------EQTVSMSSSIDDKSS---TLIYPWMQRMNACSAGPFGTSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENKL 234

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: HOXA7 (homeobox A7 [Source:NCBI gene;Acc:110015904])

HSP 1 Score: 123.25 bits (308), Expect = 2.143e-32
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 3

Query:  855 NNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGP 1124
            N   +Y WM     A +PN    KR RQTY+R+QTLELEKEFHFN+YL+RRRR+EIAH+L LTERQIKIWFQNRRMKWKK+H   + +GP
Sbjct:  108 NKHRMYPWMQ----ASDPN---RKRGRQTYSRYQTLELEKEFHFNRYLSRRRRVEIAHALTLTERQIKIWFQNRRMKWKKDHK--EQSGP 188

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000021320.2 (homeobox protein Hox-B5a [Source:NCBI gene;Acc:101169786])

HSP 1 Score: 122.865 bits (307), Expect = 1.868e-31
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 3

Query:  843 NSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKL--TGPGS 1130
            +S+ +   ++ WM     + +    + KR R  YTR+QTLELEKEFHFN+YLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKK++ +  +  T PG+
Sbjct:  209 DSDPHTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKVKSMSITAPGA 306

[Close]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Match: hoxa5a (homeobox A5a [Source:NCBI gene;Acc:58055])

HSP 1 Score: 122.094 bits (305), Expect = 2.792e-31
Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 3

Query:  807 ESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLT 1118
            +++ S PS     S++    +Y WM     + + +    KR R  YTR+QTLELEKEFHFN+YLTRRRRIEIAH+L L+ERQIKIWFQNRRMKWKK++ +  ++
Sbjct:  188 KAAGSAPSTPQNASDSAQPQIYPWMRKLHISHDISGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMS 291

[Close]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000022667.1 (SMESG000022667.1)

HSP 1 Score: 505.368 bits (1300), Expect = 0.000e+0
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 3

Query:  435 MQVDQNIQNPFQTSSNKXXXXXXXXXXXXXXXXXXNPSAGIGRYWPVSLTKVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEKCENEPN 1226
            MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVP+SDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEKC+NEPN
Sbjct:    1 MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLTKVPSSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHLATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTISPEQEIEKCDNEPN 264

[Close]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000079807.1 (SMESG000079807.1)

HSP 1 Score: 156.377 bits (394), Expect = 6.210e-44
Identity = 72/97 (74.23%), Postives = 87/97 (89.69%), Query Frame = 3

Query:  855 NNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIE 1145
            N++++Y WMNPK  +++  SS++KR+RQTYTR+QTLELEKEFHFNKYLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKK+HNI KL GPG+ +Q E
Sbjct:  196 NDMVVYPWMNPKMNSES--SSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKDHNIPKLNGPGTLEQYE 290

[Close]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000079807.1 (SMESG000079807.1)

HSP 1 Score: 155.992 bits (393), Expect = 6.471e-44
Identity = 72/97 (74.23%), Postives = 87/97 (89.69%), Query Frame = 3

Query:  855 NNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIE 1145
            N++++Y WMNPK  +++  SS++KR+RQTYTR+QTLELEKEFHFNKYLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKK+HNI KL GPG+ +Q E
Sbjct:  193 NDMVVYPWMNPKMNSES--SSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKDHNIPKLNGPGTLEQYE 287

[Close]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000043155.1 (SMESG000043155.1)

HSP 1 Score: 114.005 bits (284), Expect = 6.231e-28
Identity = 56/87 (64.37%), Postives = 62/87 (71.26%), Query Frame = 3

Query:  837 NGNSNANNVMLYSWMNPKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKE 1097
            N  S      ++ WM        PNS   +R RQTY+RHQTLELEKEF FN YLTRRRRIEIAH+L L+ERQIKIWFQNRRMK KKE
Sbjct:  227 NSRSEGGAQQIWPWMT----VVGPNSVQKRRGRQTYSRHQTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRRMKLKKE 309

[Close]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Match: SMESG000071019.1 (SMESG000071019.1)

HSP 1 Score: 111.694 bits (278), Expect = 3.393e-27
Identity = 49/64 (76.56%), Postives = 57/64 (89.06%), Query Frame = 3

Query:  915 SNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSLILTERQIKIWFQNRRMKWKKEHNI 1106
            S++KR R  YTR Q LELEKEFHFNKYLTR+RRIEIA SL L+ERQ+KIWFQNRRMKWKK+H++
Sbjct:  223 SDSKRNRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKKDHHL 286

The following BLAST results are available for this feature:

BLAST of Homeobox domain-containing protein vs. Ensembl Human
BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
BLAST of Homeobox domain-containing protein vs. Ensembl Fly
BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
BLAST of Homeobox domain-containing protein vs. TrEMBL
BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
BLAST of Homeobox domain-containing protein vs. Ensembl Yeast
BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
BLAST of Homeobox domain-containing protein vs. Planmine SMEST

BLAST of Homeobox domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
HOXB7	6.054e-36	57.85	homeobox B7 [Source:HGNC Symbol;Acc:HGNC:5118]	[more]
HOXA7	1.070e-33	56.67	homeobox A7 [Source:HGNC Symbol;Acc:HGNC:5108]	[more]
HOXA6	5.506e-32	65.93	homeobox A6 [Source:HGNC Symbol;Acc:HGNC:5107]	[more]
HOXB8	1.001e-31	43.92	homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119]	[more]
HOXB8	4.232e-31	43.24	homeobox B8 [Source:HGNC Symbol;Acc:HGNC:5119]	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
lin-39	2.401e-27	56.12	Homeobox protein lin-39 [Source:UniProtKB/Swiss-P...	[more]
lin-39	2.401e-27	56.12	Homeobox protein lin-39 [Source:UniProtKB/Swiss-P...	[more]
mab-5	6.365e-25	59.79	Homeobox protein mab-5 [Source:UniProtKB/Swiss-Pr...	[more]
php-3	7.586e-17	60.34	Posterior Hox gene Paralog [Source:UniProtKB/TrEM...	[more]
php-3	7.586e-17	60.34	Posterior Hox gene Paralog [Source:UniProtKB/TrEM...	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Antp	2.579e-33	54.33	gene:FBgn0260642 transcript:FBtr0081653	[more]
Antp	2.579e-33	54.33	gene:FBgn0260642 transcript:FBtr0081650	[more]
Antp	3.032e-33	54.33	gene:FBgn0260642 transcript:FBtr0081647	[more]
Antp	3.032e-33	54.33	gene:FBgn0260642 transcript:FBtr0081652	[more]
Antp	3.032e-33	54.33	gene:FBgn0260642 transcript:FBtr0081654	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
hoxb7a	1.480e-34	65.31	homeobox B7a [Source:NCBI gene;Acc:58044]	[more]
hoxc6a	1.416e-33	58.41	homeobox C6a [Source:NCBI gene;Acc:30346]	[more]
hoxb6a	1.103e-32	68.75	homeobox B6a [Source:NCBI gene;Acc:30341]	[more]
hoxb6b	1.865e-32	66.67	homeobox B6b [Source:NCBI gene;Acc:58053]	[more]
hoxb6b	1.865e-32	66.67	homeobox B6b [Source:NCBI gene;Acc:58053]	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
HOXB7	1.821e-35	58.47	homeobox B7 [Source:NCBI gene;Acc:100494663]	[more]
zdhhc15	8.479e-34	52.34	zinc finger DHHC-type containing 15 [Source:Xenbas...	[more]
cd276	8.492e-34	42.06	CD276 molecule [Source:Xenbase;Acc:XB-GENE-921537]	[more]
HOXD4	2.036e-32	38.31	homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138]	[more]
HOXB6	2.438e-31	63.11	homeobox B6 [Source:NCBI gene;Acc:100124320]	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Hoxb7	1.799e-35	57.02	homeobox B7 [Source:MGI Symbol;Acc:MGI:96188]	[more]
Hoxa7	1.459e-33	76.92	homeobox A7 [Source:MGI Symbol;Acc:MGI:96179]	[more]
Hoxa6	2.567e-31	70.37	homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]	[more]
Hoxb6	3.164e-31	66.67	homeobox B6 [Source:MGI Symbol;Acc:MGI:96187]	[more]
Hoxb6	3.164e-31	66.67	homeobox B6 [Source:MGI Symbol;Acc:MGI:96187]	[more]

BLAST of Homeobox domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9TT89\|HXB7_BOVIN	1.979e-35	57.85	Homeobox protein Hox-B7 OS=Bos taurus OX=9913 GN=H...	[more]
sp\|P09629\|HXB7_HUMAN	2.907e-35	57.85	Homeobox protein Hox-B7 OS=Homo sapiens OX=9606 GN...	[more]
sp\|A1YFA5\|HXB7_GORGO	2.938e-35	57.85	Homeobox protein Hox-B7 OS=Gorilla gorilla gorilla...	[more]
sp\|P04476\|HXB7B_XENLA	5.139e-35	46.03	Homeobox protein Hox-B7-B OS=Xenopus laevis OX=835...	[more]
sp\|P09024\|HXB7_MOUSE	1.258e-34	57.02	Homeobox protein Hox-B7 OS=Mus musculus OX=10090 G...	[more]

BLAST of Homeobox domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1S6KMI0	1.200e-131	100.00	Homeobox domain-containing protein (Fragment) OS=S...	[more]
A0A159X4F7	2.159e-120	100.00	HOXB7-like protein (Fragment) OS=Schmidtea mediter...	[more]
Q9XY02	7.144e-114	70.24	PLOX5-Dj (Fragment) OS=Dugesia japonica OX=6161 GN...	[more]
O76937	3.637e-101	67.32	Homeodomain protein OS=Girardia tigrina OX=6162 GN...	[more]
T1E1D4	2.989e-58	50.22	PLOX5 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
hoxb7a	8.474e-35	65.96	homeobox B7 [Source:NCBI gene;Acc:103045369]	[more]
hoxb6a	8.607e-33	54.62	homeobox protein Hox-B6a [Source:NCBI gene;Acc:103...	[more]
hoxb6b	2.172e-32	67.50	homeobox protein Hox-B6b [Source:NCBI gene;Acc:103...	[more]
hoxc6a	9.003e-32	58.18	homeobox C6 [Source:NCBI gene;Acc:103034651]	[more]
ENSAMXT00000047341.1	1.986e-31	59.41	homeobox C4 [Source:NCBI gene;Acc:103034018]	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
hoxb7a	7.354e-31	86.67	homeobox B7a [Source:NCBI gene;Acc:58044]	[more]
hoxd4a	1.255e-29	79.37	homeobox D4a [Source:NCBI gene;Acc:30329]	[more]
ENSPMAT00000005057.1	4.263e-28	61.45	pep scaffold:Pmarinus_7.0:GL483321:9136:13526:-1 g...	[more]
ENSPMAT00000011116.1	8.051e-27	77.59	pep scaffold:Pmarinus_7.0:GL482944:7995:8174:-1 ge...	[more]
ENSPMAT00000011449.1	1.576e-20	76.47	pep scaffold:Pmarinus_7.0:GL493006:3300:3479:1 gen...	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
PHO2	7.572e-6	32.26	Homeobox transcription factor; regulatory targets ...	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
HOX6	6.055e-23	51.96	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
ANTHOX1A.NV	6.041e-22	71.93	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
ANTHOX7	1.374e-21	52.81	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45896	2.801e-21	68.97	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
MOXB	6.506e-21	50.49	MoxB; Predicted protein [Source:UniProtKB/TrEMBL;...	[more]

BLAST of Homeobox domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000021318.2	7.941e-33	64.77	homeobox protein Hox-B6a [Source:NCBI gene;Acc:101...	[more]
hoxb6b	1.827e-32	55.75	homeobox protein Hox-B6b [Source:NCBI gene;Acc:101...	[more]
HOXA7	2.143e-32	65.56	homeobox A7 [Source:NCBI gene;Acc:110015904]	[more]
ENSORLT00000021320.2	1.868e-31	57.14	homeobox protein Hox-B5a [Source:NCBI gene;Acc:101...	[more]
hoxa5a	2.792e-31	53.85	homeobox A5a [Source:NCBI gene;Acc:58055]	[more]

BLAST of Homeobox domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000022667.1	0.000e+0	99.24	SMESG000022667.1	[more]
SMESG000079807.1	6.210e-44	74.23	SMESG000079807.1	[more]
SMESG000079807.1	6.471e-44	74.23	SMESG000079807.1	[more]
SMESG000043155.1	6.231e-28	64.37	SMESG000043155.1	[more]
SMESG000071019.1	3.393e-27	76.56	SMESG000071019.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30021669 ID=SMED30021669|Name=Homeobox domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1278bp
AAACAATTTGATTCTCTACTCAACACAAAGACTGTTAATTTCTTCCCCGA
ACACGGAGAAGATCCTTTGTGGCAACGGCGCTGGGCATTGGAAGCATGTG
TCCCGGATAATCACGGCATATGCTGGATTGTCTGTAAATGCTGGTTGATG
GAAAATGAATATTAATTATATTGGTTCGCATTATCGGCTAATGGCAACTT
TCTCTAGTTTTCCCAGATTAATGGAGGTTAGACACTGACAGGGTGAACCA
CTAGCTGGTCACACGTAACGAGAGAAACTGTGAAAGCACACCTCTCCGGC
AATACCGGCAATACTTGTTAATGATGTTTTGGAGAGATCTGATTGGTCGG
TTTTTCCATCGTGGAATCTGGATTTGACTCTTATAGGAATGCACAATATA
CATAAATCACAGATAGACTATTGAAGTCGATATAATGCAGGTTGATCAAA
ATATTCAAAATCCCTTTCAAACCTCATCAAATAAGCTCTCAACCTCAAGA
TCTACAGTCCACCATTCAACAAGCAGCCTCCTAAAATCCAATCCATCTGC
TGGTATTGGACGATATTGGCCAGTTTCATTGACAAAAGTGCCCACCAGTG
ATCATTTTGGATCTTTTATTGCCAATAATCTCTATTCAAATTCCAAAACG
TTTCCGAATCCTTCGTGGTCTTCACATTTCCATCCACACGACCTCTCATT
CGATGAATCATACCTCAGCTCAGTACCTCACCTTGCGACCTCTCAGTTTT
CTGCTTACTCACAGAACTGTAGACATCTCATTTGTCCGTCGATGTCCAAC
AATTTCGAGAGTTCTAACTCGAAGCCCTCAGACATCAACGGGAATTCCAA
TGCCAACAACGTGATGCTCTACTCGTGGATGAATCCGAAATCAGGAGCCG
ACAATCCCAACAGTTCAAACAACAAGCGAACCCGACAAACCTACACTCGC
CATCAAACCCTTGAATTAGAAAAGGAATTCCATTTTAACAAATACCTCAC
AAGACGTCGACGGATAGAGATCGCGCATAGCTTGATATTGACGGAGAGAC
AAATCAAAATTTGGTTTCAGAACCGTCGGATGAAATGGAAAAAAGAGCAC
AACATTGCCAAACTGACAGGCCCGGGTTCCTGTGATCAGATTGAAGCCAG
CGATAAGCCGACCATTTCCCGCTGCAGCACAATCAGTCCCGAACAGGAAA
TTGAGAAATGTGAAAACGAACCCAATTGAATTCGACTTTGTAAATTTATT
CCTAAAAGTAACCGAAATTTAGATCGAA

protein sequence of SMED30021669-orf-1

>SMED30021669-orf-1 ID=SMED30021669-orf-1|Name=SMED30021669-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=265bp
MQVDQNIQNPFQTSSNKLSTSRSTVHHSTSSLLKSNPSAGIGRYWPVSLT
KVPTSDHFGSFIANNLYSNSKTFPNPSWSSHFHPHDLSFDESYLSSVPHL
ATSQFSAYSQNCRHLICPSMSNNFESSNSKPSDINGNSNANNVMLYSWMN
PKSGADNPNSSNNKRTRQTYTRHQTLELEKEFHFNKYLTRRRRIEIAHSL
ILTERQIKIWFQNRRMKWKKEHNIAKLTGPGSCDQIEASDKPTISRCSTI
SPEQEIEKCENEPN*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell
PLANA:0000103	central nervous system
PLANA:0000142	posterior region of the whole animal
PLANA:0000421	tail
PLANA:0000463	cholinergic neuron

Vocabulary: **INTERPRO**
Term	Definition
IPR020479	Homeobox_metazoa
IPR001356	Homeobox_dom
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **biological process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020479	Homeobox domain, metazoa	PRINTS	PR00024	HOMEOBOX	coord: 200..210 score: 65.42 coord: 185..196 score: 51.06 coord: 210..219 score: 83.3
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 163..225 e-value: 4.8E-25 score: 99.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 164..220 e-value: 6.0E-21 score: 74.1
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 161..221 score: 21.524
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 164..222 e-value: 2.04671E-24 score: 90.7656
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 139..223 e-value: 3.0E-31 score: 109.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..252
None	No IPR available	PANTHER	PTHR45659	FAMILY NOT NAMED	coord: 40..236
None	No IPR available	PANTHER	PTHR45659:SF4	HOMEOTIC PROTEIN ULTRABITHORAX	coord: 40..236
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 196..219
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 144..221