Proteasome subunit beta

Overview


Name	Proteasome subunit beta
Smed ID	SMED30021541
Length (bp)	719

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Proteasome subunit beta (SMED30021541) t-SNE clustered cells

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30021541) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Proteasome subunit beta (SMED30021541) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Proteasome subunit beta (SMED30021541) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30021541

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
X1 cell	SMED30021541	SMESG000075365.1	SmedASXL_007241	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30021541	SMESG000075365.1	SmedASXL_007241	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015

Note: Hover over icons to view figure legend

Homology

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BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB2 (proteasome 20S subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539])

HSP 1 Score: 212.616 bits (540), Expect = 3.255e-69
Identity = 101/197 (51.27%), Postives = 149/197 (75.63%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID+ GI  L++++  K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPK 198

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB2 (proteasome 20S subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539])

HSP 1 Score: 83.1889 bits (204), Expect = 2.971e-20
Identity = 39/81 (48.15%), Postives = 59/81 (72.84%), Query Frame = 3

Query:  414 MDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID+ GI  L++++  K
Sbjct:    1 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPK 81

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BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB4 (proteasome 20S subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541])

HSP 1 Score: 60.077 bits (144), Expect = 3.470e-10
Identity = 43/189 (22.75%), Postives = 87/189 (46.03%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV-QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDR--KYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
             ++G++F   +++A+D  G    +A   +I +I  +++   LG  GD  D     + + Q V     + +G+  SP A   +  R +       N     +++GG    G   L ++D LG   + P    GYG+Y+   +L    +  P + + EA  L+  C++ +  R   + + F++  + E+G+
Sbjct:   55 SVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGY-ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGV 242

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB1 (proteasome 20S subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:9537])

HSP 1 Score: 58.9214 bits (141), Expect = 8.415e-10
Identity = 51/196 (26.02%), Postives = 88/196 (44.90%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNMCKEE--------AIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++ I   +F ++ASD            D  K Y+L+DK  +G  G  GD ++  + I   +++YK  N   M+  A A      L+  L +R    Y+V  ++GG+D+ G  +++  D +GS     F   G  S +   +LD +    NM   E        A+ L+ D      +R VY     ++ ++ +EGI
Sbjct:   40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Human
Match: PSMB10 (proteasome 20S subunit beta 10 [Source:HGNC Symbol;Acc:HGNC:9538])

HSP 1 Score: 58.5362 bits (140), Expect = 1.119e-9
Identity = 38/161 (23.60%), Postives = 73/161 (45.34%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCI 554
            + G+ F + +++ +D       +      +KI+ ++ K+     G + D       +   ++L+ +  G E          R+ L    R +     +L++GG+D +G P L+ +   GS   +PF   G G    L+VL+ ++ PNM  E A GLL + +
Sbjct:   42 IAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTL---FRYQGHVGASLIVGGVDLTG-PQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAV 198

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BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-4 (Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477])

HSP 1 Score: 137.887 bits (346), Expect = 2.364e-40
Identity = 71/194 (36.60%), Postives = 117/194 (60.31%), Query Frame = 3

Query:   72 LIGIRFNNFILMASD-GNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGI-DKSGVPSLHFMDYLGS-IVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            L+GI   N++++A+D        I   ++ DK Y L  KL +   G+ GD   F ++  +N+QLY +RNGYE+SP+ A HF RR +AE LR+++ Y V++L+GG  DK     L  +DYL + +   P+   G+      +++DR+Y  +M + E + L++ CI E ++RFV N+  +KV +ID++G   L+DV
Sbjct:    7 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYRKLDDV 200

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-2 (Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:O62102])

HSP 1 Score: 58.9214 bits (141), Expect = 3.942e-10
Identity = 37/162 (22.84%), Postives = 76/162 (46.91%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIK 557
            ++ + F   ++M +D       I      +K+++L++ +     G + D     + +  N++L ++  G +     A    ++ L        AY   LL+GG+D +G P L+     G+ +  PF   G GSY  +++L+R +  +M K+EA  L+   ++
Sbjct:   49 IVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAY---LLIGGVDPTG-PHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALE 206

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BLAST of Proteasome subunit beta vs. Ensembl Celegans
Match: pbs-3 (Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237])

HSP 1 Score: 50.447 bits (119), Expect = 1.842e-7
Identity = 38/154 (24.68%), Postives = 69/154 (44.81%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVP--FAVHGYGSYVTLSVLDRKYNPNMCKEE 527
            ++ +  +  + +ASD   G  +  +  D  K+++++DK+ +G+ G   D  +  E I+    LY++R    + P   +      LA   R   +Y    L+ G+D +  P +  MD +G  V  P  F   G G    L V +  +  NM  +E
Sbjct:   11 VVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMI-SNLAYQHRF-GSYFTEPLVAGLDDTNKPYICCMDTIGC-VSAPRDFVAVGTGQEYLLGVCENFWRENMKPDE 161

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BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4 (gene:FBgn0032596 transcript:FBtr0335142)

HSP 1 Score: 194.512 bits (493), Expect = 1.770e-62
Identity = 88/196 (44.90%), Postives = 131/196 (66.84%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E L+GI+  +F+++A+D    RSII M+ D +KI+++SD L +   G+SGDT  F EFI +N+ LYK+RNGY++SP  +AHFTR+ LAE LR+R  Y V + + G D +  P L F+DYL + + V +A HGYG+    S+ DR ++PN+ + EA  +   CI EIQKR V NL NF V ++D++G+  LE ++  
Sbjct:    2 ETLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAA 197

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4 (gene:FBgn0032596 transcript:FBtr0080936)

HSP 1 Score: 194.512 bits (493), Expect = 1.770e-62
Identity = 88/196 (44.90%), Postives = 131/196 (66.84%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E L+GI+  +F+++A+D    RSII M+ D +KI+++SD L +   G+SGDT  F EFI +N+ LYK+RNGY++SP  +AHFTR+ LAE LR+R  Y V + + G D +  P L F+DYL + + V +A HGYG+    S+ DR ++PN+ + EA  +   CI EIQKR V NL NF V ++D++G+  LE ++  
Sbjct:    2 ETLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAA 197

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4R2 (gene:FBgn0031443 transcript:FBtr0077699)

HSP 1 Score: 166.392 bits (420), Expect = 3.224e-51
Identity = 77/196 (39.29%), Postives = 123/196 (62.76%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E ++GI+  +F+++ASD    +S++ M++D  KI+ LSD   +   GD GDT+ F +FI +N+ LYKI +GY +S  +AAHFTR+ LA+ +RT   Y V +LL G D    P LH++D  G+   +  A HG+GS    S+L R +N  + +E+A  L+  C+ EIQ+R + N  NF+V ++D +G+  +E +  G
Sbjct:    4 ETILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPG 199

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4R2 (gene:FBgn0031443 transcript:FBtr0332513)

HSP 1 Score: 166.392 bits (420), Expect = 3.224e-51
Identity = 77/196 (39.29%), Postives = 123/196 (62.76%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E ++GI+  +F+++ASD    +S++ M++D  KI+ LSD   +   GD GDT+ F +FI +N+ LYKI +GY +S  +AAHFTR+ LA+ +RT   Y V +LL G D    P LH++D  G+   +  A HG+GS    S+L R +N  + +E+A  L+  C+ EIQ+R + N  NF+V ++D +G+  +E +  G
Sbjct:    4 ETILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPG 199

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Fly
Match: Prosbeta4R1 (gene:FBgn0031442 transcript:FBtr0077697)

HSP 1 Score: 145.591 bits (366), Expect = 4.918e-43
Identity = 69/193 (35.75%), Postives = 117/193 (60.62%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            E ++G++  +FI++ASD    +S + + +++ K + +SD   +   GD GD + F++FIL+N+ LYKI NGY+++   A HF RR L+  L++   + V+LL+GG D +  P LH++DYLG+ V V +  HG        +L+  Y P+M  + A  ++  C+ E+ KRFV NL N  + LI + GI+ +  +
Sbjct:    2 ETILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSI 194

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb2 (proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353])

HSP 1 Score: 233.417 bits (594), Expect = 1.431e-77
Identity = 105/197 (53.30%), Postives = 152/197 (77.16%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +F+L+A+D     SII M++D DK+++LS+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTR+ LA+ LR+R  YHVNLLL G D++  P L++MDYL ++   PFA HGYG+++TLS+LDR Y P++ +EEA+ LL  C++E+ KRF+ NL +F V+LID++GI  +E + VG+
Sbjct:    2 EYLIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDGIHDMEKLPVGR 198

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb2 (proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353])

HSP 1 Score: 202.986 bits (515), Expect = 4.561e-66
Identity = 89/164 (54.27%), Postives = 129/164 (78.66%), Query Frame = 3

Query:  165 IYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            +++LS+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTR+ LA+ LR+R  YHVNLLL G D++  P L++MDYL ++   PFA HGYG+++TLS+LDR Y P++ +EEA+ LL  C++E+ KRF+ NL +F V+LID++GI  +E + VG+
Sbjct:    1 MFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDGIHDMEKLPVGR 164

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb1 (proteasome 20S subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2])

HSP 1 Score: 59.3066 bits (142), Expect = 3.076e-10
Identity = 51/196 (26.02%), Postives = 88/196 (44.90%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNM--------CKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++ +   +F ++ASD            D  K Y+L+D   LG  G  GD ++  + I   +++YK  N   M+  A A      L+  L  R    Y+V  ++GG+D+ G  +++  D +GS     +   G  S +   +LD +    NM         +E+A+ L+ D      +R VY     KV ++ +EGI
Sbjct:   36 VLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAM----LSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKDVFISAAERDVYTGDALKVCIVSKEGI 227

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Match: psmb10 (proteasome 20S subunit beta 10 [Source:ZFIN;Acc:ZDB-GENE-040718-278])

HSP 1 Score: 55.4546 bits (132), Expect = 1.084e-8
Identity = 40/161 (24.84%), Postives = 75/161 (46.58%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCI 554
            + G+ F + +++ +D      ++    +  KI+ ++  +     G + D     + +  NV+L+ +  G    P   A  TR+      R +     +L++GG+D +G   L+ +   GS   +PF   G G+   +SV + +Y PNM  EEA  L+ D I
Sbjct:   45 IAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCGAGVAADAEVTTQMMSSNVELHSLSTG---RPPLVAMVTRQLKQMLFRYQGHIGSSLIVGGVDVNGA-QLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDAI 201

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Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCI 554
            + G+ F + +++ +D      ++    +  KI+ ++  +     G + D     + +  NV+L+ +  G    P   A  TR+      R +     +L++GG+D +G   L+ +   GS   +PF   G G+   +SV + +Y PNM  EEA  L+ D I
Sbjct:   45 IAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCGAGVAADAEVTTQMMSSNVELHSLSTG---RPPLVAMVTRQLKQMLFRYQGHIGSSLIVGGVDVNGA-QLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDAI 201

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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: septin4 (septin 4 [Source:Xenbase;Acc:XB-GENE-983580])

HSP 1 Score: 225.713 bits (574), Expect = 1.698e-74
Identity = 102/189 (53.97%), Postives = 147/189 (77.78%), Query Frame = 3

Query:   78 GIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            GI+ N+F+L+A+D     SII M++D+DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   PSL++MDYL ++    FA HGYG+Y+TLS+LDR Y P++ +E+A+ LL  CI E+QKRF+ +L +F V++ID++GI  LE +
Sbjct:    6 GIQGNDFVLVAADTVCANSIIKMKHDVDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKKCIAELQKRFILSLPSFTVRVIDKDGIHDLETI 194

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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: rapgef3 (Rap guanine nucleotide exchange factor 3 [Source:Xenbase;Acc:XB-GENE-5955480])

HSP 1 Score: 63.929 bits (154), Expect = 1.622e-11
Identity = 43/161 (26.71%), Postives = 80/161 (49.69%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCI 554
            + GI F + +++ +D      +I    +  KI+ ++  +     G + DT    + I  N++L+ +  G  +S  A A+   +Q+    R +      L+LGG+D +G P L+ +   GS   +P+   G GS   ++V + +Y P+M +EEA  L+ D I
Sbjct:   46 IAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCGAGTAADTEMTTQMISSNMELHSLSTG-RLSRVATANRMLKQML--FRYQGYIGAALVLGGVDCTG-PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRDAI 202

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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: rapgef3 (Rap guanine nucleotide exchange factor 3 [Source:Xenbase;Acc:XB-GENE-5955480])

HSP 1 Score: 63.5438 bits (153), Expect = 2.008e-11
Identity = 43/161 (26.71%), Postives = 80/161 (49.69%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCI 554
            + GI F + +++ +D      +I    +  KI+ ++  +     G + DT    + I  N++L+ +  G  +S  A A+   +Q+    R +      L+LGG+D +G P L+ +   GS   +P+   G GS   ++V + +Y P+M +EEA  L+ D I
Sbjct:   46 IAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCGAGTAADTEMTTQMISSNMELHSLSTG-RLSRVATANRMLKQML--FRYQGYIGAALVLGGVDCTG-PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRDAI 202

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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: ttc38 (tetratricopeptide repeat domain 38 [Source:Xenbase;Acc:XB-GENE-5833263])

HSP 1 Score: 54.6842 bits (130), Expect = 1.477e-8
Identity = 43/189 (22.75%), Postives = 85/189 (44.97%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVL----DRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++G++F+  +++A+D  G    +A   +I +I ++++   LG  GD  D     + I  +     +R        A + +  +    + R      + L L   D S    L ++D LG   + P    G+G+Y+   +L    +RK    + KEEA  L+  C+K +  R   + + F++  + E G+
Sbjct:    9 VLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTILGASGDYADYQYLKQVIRPDELALPLRCHPGPLCQAPSLYCEQTEGLAPRRLPIAPIVLSLPLTDASSHSFLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKAT--LSKEEARALIERCMKVLYYRDARSYNRFEIATVTESGV 195

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BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Match: psmb1 (proteasome subunit beta 1 [Source:NCBI gene;Acc:394589])

HSP 1 Score: 52.7582 bits (125), Expect = 7.926e-8
Identity = 46/197 (23.35%), Postives = 87/197 (44.16%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNMCK--------EEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
             ++ +  ++F L+ASD            +  K Y+L+D   +G  G   D ++  + I   +++YK  N   M+  A A      L+  L +R    Y+V  ++GG+D+ G  +++  D +GS     +   G  S +   +LD +    NM          E+A+ L+ D      +R VY      + ++ ++GI
Sbjct:   16 TVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKDVFISAAERDVYTGDALHISIVTKDGI 208

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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb2 (proteasome (prosome, macropain) subunit, beta type 2 [Source:MGI Symbol;Acc:MGI:1347045])

HSP 1 Score: 216.468 bits (550), Expect = 7.123e-71
Identity = 103/197 (52.28%), Postives = 150/197 (76.14%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID++GI  LE++A  K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLENIAFPK 198

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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb4 (proteasome (prosome, macropain) subunit, beta type 4 [Source:MGI Symbol;Acc:MGI:1098257])

HSP 1 Score: 62.3882 bits (150), Expect = 3.570e-11
Identity = 44/189 (23.28%), Postives = 88/189 (46.56%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV-QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDR--KYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
             ++G++F+  +++A+D  G    +A   +I +I  ++D   LG  GD  D     + + Q V     + +G+  SP A   +  R +       N     +++GG    G   L ++D LG   + P    GYG+Y+   +L    +  P + + EA  L+  C++ +  R   + + F++  + E+G+
Sbjct:   55 SVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGY-ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGV 242

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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb7 (proteasome (prosome, macropain) subunit, beta type 7 [Source:MGI Symbol;Acc:MGI:107637])

HSP 1 Score: 58.9214 bits (141), Expect = 7.664e-10
Identity = 45/193 (23.32%), Postives = 89/193 (46.11%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAV 650
            + G+ + + I++ +D      ++    +  KI+ +S  +     G + DT    + I  N++L+ +  G       A    ++ L    R +      L+LGG+D +G P L+ +   GS   +P+   G GS   ++V + K+ P+M +EEA  L+ + I       + + SN  + +I +  + FL   +V
Sbjct:   46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQML---FRYQGYIGAALVLGGVDVTG-PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSV 234

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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb1 (proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884])

HSP 1 Score: 58.151 bits (139), Expect = 1.004e-9
Identity = 51/196 (26.02%), Postives = 88/196 (44.90%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNMCKEE--------AIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++ I   +F ++ASD            D  K Y+L+DK  +G  G  GD ++  + I   +++YK  N   M+  A A      L+  L +R    Y+V  ++GG+D+ G  +++  D +GS     F   G  S +   +LD +    NM   E        A+ L+ D      +R VY     ++ ++ +EGI
Sbjct:   39 VLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230

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BLAST of Proteasome subunit beta vs. Ensembl Mouse
Match: Psmb1 (proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884])

HSP 1 Score: 53.5286 bits (127), Expect = 2.561e-8
Identity = 43/156 (27.56%), Postives = 72/156 (46.15%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAI 533
            ++ I   +F ++ASD            D  K Y+L+DK  +G  G  GD ++  + I   +++YK  N   M+  A A      L+  L +R    Y+V  ++GG+D+ G  +++  D +GS     F   G  S +   +LD   N  MC   A+
Sbjct:   39 VLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD---NQVMCLSRAL 187

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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|Q9R1P3|PSB2_MOUSE (Proteasome subunit beta type-2 OS=Mus musculus OX=10090 GN=Psmb2 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.982e-70
Identity = 103/197 (52.28%), Postives = 150/197 (76.14%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID++GI  LE++A  K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLENIAFPK 198

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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P40307|PSB2_RAT (Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.636e-69
Identity = 102/197 (51.78%), Postives = 149/197 (75.63%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID++GI  LE++   K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLENITFTK 198

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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P49721|PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.563e-68
Identity = 101/197 (51.27%), Postives = 149/197 (75.63%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E A+ LL  C++E+QKRF+ NL  F V++ID+ GI  L++++  K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPK 198

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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|Q5E9K0|PSB2_BOVIN (Proteasome subunit beta type-2 OS=Bos taurus OX=9913 GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.563e-68
Identity = 101/197 (51.27%), Postives = 149/197 (75.63%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            E LIGI+  +++L+ASD     +I+ M++D DK++++S+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G D+   P+L++MDYL ++   PFA HGYG+++TLS+LDR Y P + +E+A+ LL  C++E+QKRF+ NL  F V++ID  GI  L++++  K
Sbjct:    2 EYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKCLEELQKRFILNLPTFSVRIIDRNGIHDLDNISFPK 198

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BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Match: sp|P22141|PSB4_YEAST (Proteasome subunit beta type-4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRE1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.117e-52
Identity = 78/193 (40.41%), Postives = 124/193 (64.25%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGID-KSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLED 641
            + ++GIR  + +++AS     R I  +++  DK  +LS    +   G++GDTV FAE+I  N+QLY IR  YE+SP A + F R++LA+S+R+R  Y VN+L+GG D K   P L+ +DYLG+ V++P+  HGY  + T S+LD  Y P+M  EE + LL  C++E++KR   +     VK++D++GI  ++D
Sbjct:    2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDD 194

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BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A1W4WMT1 (Proteasome subunit beta OS=Agrilus planipennis OX=224129 GN=LOC108734379 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.785e-78
Identity = 108/195 (55.38%), Postives = 149/195 (76.41%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAV 650
            EC+IGI+F +F ++A+D    +SII M+ND +K+++LSDKL + I G+ GDT  FAE+I +N+QLYK+RNGYE+SPNAAA FTRR LAE+LRTRNAYHVNLLL G D    P+L+FMDYL SI +V +A HGYG + +LSV+DR Y  NM +E+A  L+  C++E+ +R + NL NFKV+++D+ GI+ L D+  
Sbjct:    2 ECIIGIKFKDFAIVAADMTTAQSIIVMKNDENKLHKLSDKLVMAITGEQGDTTQFAEYIAKNIQLYKMRNGYELSPNAAATFTRRNLAEALRTRNAYHVNLLLAGYDDQTGPALYFMDYLASIAEVKYAAHGYGGFFSLSVMDRYYLSNMNREDAYELMKKCVREVHQRLIINLPNFKVQIVDKNGITNLPDITA 196

[Close]

BLAST of Proteasome subunit beta vs. TrEMBL
Match: A2IAA2 (Proteasome subunit beta OS=Xenopsylla cheopis OX=163159 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.261e-76
Identity = 105/190 (55.26%), Postives = 149/190 (78.42%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
            ECL+GIRF+ FI++A+D    +SI+ M+N+ +KIYE++D++ +GI G+SGDT  FAE+I +N+QLYK+RNGY +S  +AA+FTRR LA++LR+RNAYHVN+L+GG DK G P L+FMDYLG+ V +P+A HGYG + +LS++DR Y  +M +EEA  ++  CI EI KR + NL NFKV ++DE GI +L
Sbjct:    2 ECLLGIRFDKFIMIAADMTNAQSIVVMKNEENKIYEMTDRIVMGINGESGDTTQFAEYIAKNIQLYKMRNGYSVSTVSAANFTRRNLADALRSRNAYHVNMLIGGHDKEGGPQLYFMDYLGACVSLPYACHGYGGFFSLSIMDRYYRSDMSQEEAYAIIKRCISEIHKRLIINLPNFKVVVVDENGIKYL 191

[Close]

BLAST of Proteasome subunit beta vs. TrEMBL
Match: R7THR9 (Proteasome subunit beta OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_176004 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.924e-76
Identity = 99/193 (51.30%), Postives = 152/193 (78.76%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            ECLIGI+  +F+ +A+D    RSI+ M++D DK+Y++SD++ + + G+SGDTV FAE+I +N+QLYK+RNGYE+SP+AAA+FTR+ +A+ LR+R  Y VNLL+ G D+   PSL FMDYL S+V+VP+ +HGYGSY++L +LD+ Y  ++ +EE + LL  C++EI+KRF+ NL  FK+K++D++G+  L+D+
Sbjct:    2 ECLIGIKGKDFVAIATDAKSARSIVQMKHDTDKVYKMSDRVVMAVSGESGDTVQFAEYIAKNIQLYKMRNGYELSPHAAANFTRKNMADFLRSRTPYMVNLLMAGFDEEKGPSLFFMDYLASLVEVPYGIHGYGSYLSLGILDKFYREDLNREEVLELLRKCVQEIEKRFIVNLGTFKIKIVDKDGVHVLDDI 194

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BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A1I8GCK1 (Proteasome subunit beta OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig015617g1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.563e-76
Identity = 111/194 (57.22%), Postives = 155/194 (79.90%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKS-GVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            ECLIGI+FN+++L+A+D NGGRSII+M++D+DK++ LS++LA+ + G+SGDT  FAEFI QNVQLYKIR+GYE+SP AAA+FTRR  A+SLR+R+ Y VN+LL G D + G P L+++DYLGS++ +PF+V GYG Y++LSVLDR Y P+M + + I LL   I EIQKR V +LS F+V  +D  G++ L+D+
Sbjct:    2 ECLIGIQFNDYVLLAADCNGGRSIISMKDDVDKMFRLSERLAIIVSGESGDTNKFAEFIEQNVQLYKIRHGYELSPYAAANFTRRNQAQSLRSRSPYFVNMLLAGYDANKGQPELYYLDYLGSLMKLPFSVIGYGGYMSLSVLDRHYRPDMAEADGIRLLRTVISEIQKRLVISLSKFRVHRVDRNGVTQLDDI 195

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BLAST of Proteasome subunit beta vs. TrEMBL
Match: A0A0R3WX87 (Proteasome subunit beta OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS5363 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.606e-76
Identity = 109/193 (56.48%), Postives = 148/193 (76.68%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            ECLIGI FN+F ++A+D     S++ +++D DK+++LS    + ICG+SGDTV FAEFI QN+QLY+IRNGYE++P AAA FTRR LAE+LRTRN Y+VNLLL G D    P +++MDYL S+VDVP+AVHG+GS+VTL+VLD +Y+P M  + A+ LL  CI E+QKRFV N   F VK+++++GI  L D+
Sbjct:    2 ECLIGIAFNDFAIVAADARVNHSVVTLKDDADKMFKLSKHCLMSICGESGDTVQFAEFIQQNMQLYEIRNGYELTPYAAASFTRRNLAEALRTRNPYNVNLLLAGYDSCAGPKIYYMDYLASMVDVPYAVHGHGSFVTLAVLDSQYDPAMKIDHALILLKSCITELQKRFVINYGRFIVKVVNKDGIENLPDL 194

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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb2 (proteasome 20S subunit beta 2 [Source:NCBI gene;Acc:103046353])

HSP 1 Score: 229.95 bits (585), Expect = 2.312e-76
Identity = 103/196 (52.55%), Postives = 152/196 (77.55%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E L+GI+  +F+L+A+D     SII M++D DK+++LS+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP AAA+FTR+ LA+ LR+R  YHVNLLL G D+S  P L++MD+L ++   PFA HGYG+++TLS+LDR Y P++ ++EA+ LL  C++E++KRF+ NL +F V+LID++GI  LE + +G
Sbjct:    2 EYLLGIQGQDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDESDGPGLYYMDHLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTRDEAVELLKKCVEELKKRFILNLPSFTVRLIDKDGIHDLEKLPLG 197

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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb4 (proteasome 20S subunit beta 4 [Source:NCBI gene;Acc:103028437])

HSP 1 Score: 61.2326 bits (147), Expect = 6.962e-11
Identity = 43/192 (22.40%), Postives = 90/192 (46.88%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV-QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDR--KYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
             ++G++F   +++A+D  G    +A   +I ++ +++D   LG  GD  D     + I Q V     + +G+  SP A   +  R +       N     +++GG   +G   L ++D LG   + P    G+G+Y+   ++    +    + K+EA  L+  C++ +  R   + +  ++ ++ EEG+  L
Sbjct:   49 SVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDNTILGASGDYADYQYLKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGF-YNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKAEITKDEARALIERCLRVLYYRDARSYNRHEIAIVTEEGVEIL 239

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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb10 (proteasome subunit beta type-7-like [Source:NCBI gene;Acc:103034426])

HSP 1 Score: 60.8474 bits (146), Expect = 1.109e-10
Identity = 47/188 (25.00%), Postives = 89/188 (47.34%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
            + GI F + +++ +D      ++    +  KI+ ++ K+     G + D     + +  N++L+ +  G    P      TR+      R +     +L++GG+D +G P L+ +   GS   +PF   G G+   +SV + ++ PNM  EEA  L+ D I       + + SN  + +I E+G+ FL
Sbjct:   47 IAGIIFKDGVILGADTRATDDMVVADKNCIKIHYIAPKIYCCGAGVAADAEVTTQMMSSNIELHSLSTG---RPPLVVTVTRQLKQMLFRYQGHIGSSLIVGGVDVNG-PQLYSVYPHGSYDKLPFLTMGSGAASAVSVFEDRFKPNMELEEAKQLVRDAIVAGIFCDLGSGSNVDLCVITEKGVDFL 230

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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb13a (proteasome subunit beta type-7-like [Source:NCBI gene;Acc:103024985])

HSP 1 Score: 58.9214 bits (141), Expect = 6.019e-10
Identity = 42/188 (22.34%), Postives = 87/188 (46.28%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
            + G+ + + +++ +D     S +       KI+ ++  +     G + DT    + +  N+ ++ + +G       AA+  +  L    R R     NL+LGG+D +G   ++ +   GS+  VPF   G G    + VL+ ++ P++  EEA  L+ D I       + + +N  + +I  EG+ ++
Sbjct:   46 IAGVVYKDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCGAGTAADTEKTTDMLSSNLTIFSLNSGRNPRVVMAANIIQDML---FRYRGGIGANLILGGVDCTG-SHIYNVGPFGSMTKVPFIAMGSGDLAAMGVLEDRFKPSLELEEAKFLVRDAIHAGIMSDLGSGNNIDICVITREGVDYI 229

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BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Match: psmb1 (proteasome 20S subunit beta 1 [Source:NCBI gene;Acc:103036260])

HSP 1 Score: 56.6102 bits (135), Expect = 2.666e-9
Identity = 50/196 (25.51%), Postives = 87/196 (44.39%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNM--------CKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++ +   +F L+ASD            D  K Y+L+D   +G  G  GD ++  + I   +++YK  N   M+  A A      L+  L  R    Y+V  ++GG+D+ G  +++  D +GS     +   G  S +   +LD +    NM          E+A+ L+ D      +R VY     K+ ++ +EGI
Sbjct:   39 VLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHANNKSMTSGAIAAM----LSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDSYKAGGSASAMLQPLLDNQIGFKNMENVQQLPLTLEKAVQLVKDVFISAAERDVYTGDALKICIVTKEGI 230

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BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: psmb2 (proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353])

HSP 1 Score: 199.904 bits (507), Expect = 2.288e-65
Identity = 88/164 (53.66%), Postives = 126/164 (76.83%), Query Frame = 3

Query:  153 DIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDV 644
            D +K++ LSD++ L   G+SGDTV FAE++ +NVQLYK+RNGYE+SP AAA+FTRR LA+ LR+R  YHVNLLL G ++S  PSL +MDYL S+V VPFA HGYG+ +T+++LDR Y+P++ +EEA+ +L  C +E+ KRF+ NL  F V+++D+ G+  L  +
Sbjct:    1 DQEKMFRLSDRILLLCTGESGDTVQFAEYVQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYEESEGPSLFYMDYLSSMVRVPFAAHGYGAALTITILDRHYHPDLTREEAVEILQKCAQEMHKRFLVNLPAFTVRIVDQGGVHDLPTI 164

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BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: psmb4 (proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333])

HSP 1 Score: 77.7962 bits (190), Expect = 1.099e-17
Identity = 52/194 (26.80%), Postives = 100/194 (51.55%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV---QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVL--DRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
             ++GI+FN  +L+A+D  G    +A   +I ++  ++DK  LG  GD  D     + + Q V   Q+  + +G+  +P A   +  R +       N     +++GG  K G   L ++D LG   + P    G+G+Y+ L +L  +++ NP+M ++EA+ L+  C+K +  R   + + F++ ++ +EG   L
Sbjct:   18 SVLGIKFNGGVLVAADMLGSYGSLARFRNISRLMAVNDKTLLGASGDYADFQYLKDVLEQMVIDDQV--LEDGHYYTPKAIHSWLTRVMYNRRSKFNPLWNTIVVGGYHK-GESFLGYVDKLGVAYESPVVATGFGAYLALPLLRDEQEKNPDMSQQEAMELMERCLKILYYRDARSYNKFEIAVVTKEGSKVL 208

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BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: psmb7 (proteasome 20S subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4])

HSP 1 Score: 69.707 bits (169), Expect = 1.876e-14
Identity = 54/215 (25.12%), Postives = 100/215 (46.51%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK*SCNDKNCLFVSQ*IFRFKK 716
            + GI F + +++ +D       I    + +KI+ L+  +     G + DT    + I  N++L+ +  G +     A    ++ L    R +     +L+LGG+D +G P L+ +   GS   +P+   G GS   ++V + ++ PNM +EEA  L+ D I       + + SN  + +I +E + +L    V     N K    V Q  +R+K+
Sbjct:   46 IAGIIFKDGVVLGADTRATEDTIVADKNCEKIHYLAPNMYCCGAGTAADTEMTTQLISSNLELHSLSTGRQGRVVTANRMLKQML---FRYQGHIGASLVLGGVDITG-PQLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDRFKPNMEEEEAKQLVRDAIAAGIFNDLGSGSNIDLCVITKEKVDYLRPYEV----ANKKG---VRQNSYRYKR 249

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BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009464.1 (pep scaffold:Pmarinus_7.0:GL476605:530828:534431:-1 gene:ENSPMAG00000008555.1 transcript:ENSPMAT00000009464.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 47.3654 bits (111), Expect = 9.454e-7
Identity = 39/172 (22.67%), Postives = 74/172 (43.02%), Query Frame = 3

Query:   75 IGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNL--LLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYN 584
            +  +F + +++A D             + K+ E++  L   + G + D + +   + +  ++Y++RN   +S  AA+      LA  +       +++  ++ G DK G P L+++D  G  +       G GS     VLD  Y  ++ KEEA  L    I     R  Y+
Sbjct:   74 LAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCMYWERVLAKQCRIYELRNKERISVAAASKL----LANMVYQYKGMGLSMGTMICGWDKKG-PGLYYVDDEGMRLPGSMFAVGSGSPYAFGVLDSGYREDLTKEEAYDLGRRAIASATHRDAYS 240

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE1 (Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle [Source:SGD;Acc:S000000814])

HSP 1 Score: 171.4 bits (433), Expect = 3.049e-54
Identity = 78/193 (40.41%), Postives = 124/193 (64.25%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGID-KSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLED 641
            + ++GIR  + +++AS     R I  +++  DK  +LS    +   G++GDTV FAE+I  N+QLY IR  YE+SP A + F R++LA+S+R+R  Y VN+L+GG D K   P L+ +DYLG+ V++P+  HGY  + T S+LD  Y P+M  EE + LL  C++E++KR   +     VK++D++GI  ++D
Sbjct:    2 DIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDD 194

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BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PUP1 (Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after basic residues; synthesized as a proprotein before being proteolytically processed for assembly into 20S particle; human homolog is subunit Z [Source:SGD;Acc:S000005683])

HSP 1 Score: 62.7734 bits (151), Expect = 2.856e-12
Identity = 42/163 (25.77%), Postives = 81/163 (49.69%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVH-GYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIK 557
            ++G++FNN +++A+D    +  I    +  K++ +S K+     G + DT +  + I  N++L+ +    E    +A    ++ L +      AY   L++ G+D +G  S  F  +     DV + +  G GS   ++VL+  +  ++ KEEAI L  D I+
Sbjct:   32 IVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAY---LIVAGVDPTG--SHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQ 189

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BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PRE3 (Beta 1 subunit of the 20S proteasome; responsible for cleavage after acidic residues in peptides [Source:SGD;Acc:S000003538])

HSP 1 Score: 53.5286 bits (127), Expect = 3.490e-9
Identity = 33/166 (19.88%), Postives = 74/166 (44.58%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQK 569
            ++ + F + +++ +D              DK+  + DK+     G + DT + A+ +  +++LY  + G   +  AA+ F  ++L      ++     +++ G D      ++ +   GS+  +P+A+ G GS       D+ +  NM KEE +  +   + +  K
Sbjct:   22 IMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVF--KELC--YENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIK 183

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BLAST of Proteasome subunit beta vs. Ensembl Yeast
Match: PUP3 (Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10 [Source:SGD;Acc:S000000896])

HSP 1 Score: 45.8246 bits (107), Expect = 1.378e-6
Identity = 38/154 (24.68%), Postives = 64/154 (41.56%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGID-KSGVPSLHFMDYLGSIVDVP-FAVHGYGSYVTLSVLDRKYNPNMCKEE 527
            ++ +   + + +A D   G   + + N  +KI+     + LGI G + D  +  E       LYK++    + P          L E  R    Y V  ++ GI+ KSG P +   D +G I +   F V G  S     + +  Y PN+  E+
Sbjct:   12 VVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYE--RRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPED 162

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BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO32854 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7STW4])

HSP 1 Score: 221.861 bits (564), Expect = 1.252e-73
Identity = 101/187 (54.01%), Postives = 142/187 (75.94%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            E LIGI+ + F+L+A+D   GRSI+ M++D DK+ +LSD L + + G+SGDT  FAE+I +NVQLYK+RNGY+++P+AAA+FTRR LAE LR+R  Y VNLLL G   +  P+L+ MDYL ++  VPFA HGYGS+  LS++DR + PNM K++A+ LL  C  E+QKRF+ NL NF V+++D++GI
Sbjct:    2 EFLIGIQGDGFVLVAADCASGRSIVRMKDDYDKMTKLSDNLLMLVTGESGDTAQFAEYIEKNVQLYKMRNGYDLTPHAAANFTRRTLAEYLRSRTPYMVNLLLAGHSSNEGPALYHMDYLAALSKVPFAAHGYGSFFVLSIMDRYFKPNMTKDQALELLERCTNEVQKRFIVNLPNFTVRVVDKDGI 188

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BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO40407 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7S7D6])

HSP 1 Score: 74.7146 bits (182), Expect = 4.321e-16
Identity = 52/193 (26.94%), Postives = 96/193 (49.74%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV-QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKY--NPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLE 638
             ++GI+FN  +LMA+D  G    +A   +I ++  +++   +G  GD  D       + Q V     + +G+  +P +   +  R +       +     +++GGI+K G   L F+D +G   + P    G+G+Y+   +L   Y  NPNM +EEA  LL +C+K +  R   +L+ F++ +I ++G    E
Sbjct:   53 SVLGIKFNGGVLMAADTLGSYGSLARYRNISRLMRVNENTIIGAAGDYADFQYIKSVLEQKVIDDACLADGHGYTPKSIFSWLTRTMYYRRTKFDPLWNQIIVGGIEK-GESFLGFVDKIGIAYEAPTLASGFGAYLAQPLLRDAYEKNPNMSEEEARKLLVECLKVLFYRDGRSLNRFEIAVITKDGTKVEE 244

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO34100 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7SQB6])

HSP 1 Score: 66.2402 bits (160), Expect = 3.505e-13
Identity = 49/194 (25.26%), Postives = 91/194 (46.91%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLE--DVA 647
            + GI F + +++ +D       I    +  KI+ ++  +     G + DT    + I   +QL+ +  G +     +    +++L    R +      L+LGG+D SG P LH +   GS   +P+   G GS   ++V + +Y P+M  EEA  L+ D I       + + SN  + +I ++G+ ++   DVA
Sbjct:   19 IAGIVFKDGVILGADTRATEDTIVADKNCSKIHYIAPNIYCCGAGTAADTEYVTDLISSQIQLHSLNTGRQARIVTSLRMLKQRL---FRYQGYISAALVLGGVDFSG-PHLHTVYPHGSTDSLPYVTMGSGSLAAMAVFESRYRPDMELEEAKQLVRDGIAAGIFNDLGSGSNVDLCVITKDGVDYIRPYDVA 208

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO34642 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7SNR2])

HSP 1 Score: 54.299 bits (129), Expect = 6.062e-9
Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRK----------YNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGIS 629
            ++ I   +F ++ASD    +       D  K+Y+L+    LG  G  GD ++  + I   +Q+Y+  +G  MS  A A      L    R    Y+   +L G+D  G   +   D +GS     +   G  S +   +LD +          + P + +++A+ L+ D      +R +Y      + ++  EG+S
Sbjct:   28 VLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLY--YRRFFPYYTYNILAGLDSEGKGCVFSFDPVGSYEREVYRAGGSASALLQPLLDNQIGFKNQEGVPHTP-LTRDKAVALVKDVFTSAAERDIYTGDAVIINVVSSEGVS 220

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Match: EDO42974 (Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A7S085])

HSP 1 Score: 46.2098 bits (108), Expect = 2.561e-6
Identity = 35/150 (23.33%), Postives = 68/150 (45.33%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGID-KSGVPSLHFMDYLGSIVDVP-FAVHGYGSYVTLSVLDRKYNPNM 515
            +I +   N + +A+D   G     +  D  KI+++ +KL +G+ G + D  + +  +   + LY++R G  + P          L E  R    Y V  ++ G+D K+  P +  MD +G  ++   F V G  S     + +  + P++
Sbjct:   11 IIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYE--RRFGPYFVEPVIAGLDPKTNEPFISSMDLIGCPMETKDFVVSGTCSEQMYGMCESLWVPDL 158

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb2 (proteasome 20S subunit beta 2 [Source:NCBI gene;Acc:101166972])

HSP 1 Score: 231.106 bits (588), Expect = 8.235e-77
Identity = 105/196 (53.57%), Postives = 150/196 (76.53%), Query Frame = 3

Query:   66 ECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVG 653
            E LIGI+  +F+L+A+D     SII M++D DK+++LS+K+ L   G++GDTV FAE+I +NVQLYK+RNGYE+SP+AAA+FTR+ LA+ LR+R  YHVNLLL G D +  P L +MDYL S+   PFA HGYG+++TLS+LDR Y P++ +EEA+ +L  C++E+ KRF+ NL +F V+LID++GI  +E + VG
Sbjct:    2 EYLIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLLLAGYDDADGPGLFYMDYLSSLAKAPFAAHGYGAFLTLSILDRDYKPDLTREEAMNILRKCVEELNKRFILNLHSFNVRLIDKDGIHDMEKLTVG 197

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb4 (proteasome 20S subunit beta 4 [Source:NCBI gene;Acc:101169953])

HSP 1 Score: 60.8474 bits (146), Expect = 1.019e-10
Identity = 43/192 (22.40%), Postives = 91/192 (47.40%), Query Frame = 3

Query:   69 CLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNV-QLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDR--KYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFL 635
             ++G++F   +++A+D  G    +A   +I ++ +++D   LG  GD  D     + I Q V     + +G+  SP A   +  R +       N     ++LGG   +G   L ++D LG   + P    G+G+Y+   ++    +   ++ K+EA  L+  C+K +  R   + +  ++ ++ E+G+  +
Sbjct:   50 SVLGVKFAGGVIIAADMLGSYGSLARFRNISRLMKVNDNTILGASGDYADYQYLKQVIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVLGGF-YNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKADITKQEARDLIERCLKVLYYRDARSYNRHEIAIVTEQGVEII 240

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb1 (proteasome 20S subunit beta 1 [Source:NCBI gene;Acc:101158593])

HSP 1 Score: 58.5362 bits (140), Expect = 5.807e-10
Identity = 49/196 (25.00%), Postives = 89/196 (45.41%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN--AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYN-PNM--------CKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            ++ +   +F ++ASD            D  K Y+L+D   LG  G  GD ++  + I   +++YK  N   M+  A A      L+  L +R    Y+V  ++GG+D+ G  +++  D +GS     +   G  S +   +LD +    NM         K++A+ L+ D      +R VY     ++ ++ +EGI
Sbjct:   36 VLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEQGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKDVFVSAAERDVYTGDALRICIVTKEGI 227

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb8 (proteasome 20S subunit beta 8 [Source:NCBI gene;Acc:100049532])

HSP 1 Score: 51.6026 bits (122), Expect = 1.784e-7
Identity = 43/185 (23.24%), Postives = 82/185 (44.32%), Query Frame = 3

Query:   75 IGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN-AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGI 626
            +  +F + +++A D           ND++K+ E++  L   + G + D   +   + +  +LY++RN + +S  AA+      +   L  R     V  ++ G DK G P L+++D  G+ +       G G+     V+D  Y  +M  EEA  L    I     R  Y+  +  +  + E+G+
Sbjct:   75 LAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMM---LGYRGMGLSVGSMICGWDKEG-PGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDGL 255

[Close]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Match: psmb8 (proteasome 20S subunit beta 8 [Source:NCBI gene;Acc:100049532])

HSP 1 Score: 51.2174 bits (121), Expect = 2.465e-7
Identity = 43/184 (23.37%), Postives = 81/184 (44.02%), Query Frame = 3

Query:   75 IGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRN-AYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEG 623
            +  +F + +++A D           ND++K+ E++  L   + G + D   +   + +  +LY++RN + +S  AA+      +   L  R     V  ++ G DK G P L+++D  G+ +       G G+     V+D  Y  +M  EEA  L    I     R  Y+  +  +  + E+G
Sbjct:   75 LAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPYLLGTMSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMM---LGYRGMGLSVGSMICGWDKEG-PGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNMYHMREDG 254

[Close]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000075365.1 (SMESG000075365.1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.201e-145
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 3

Query:   60 MTECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            M ECLIGIRFNNFILMA DGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK
Sbjct:    1 MAECLIGIRFNNFILMACDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 199

[Close]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000075368.1 (SMESG000075368.1)

HSP 1 Score: 381.719 bits (979), Expect = 2.514e-136
Identity = 180/199 (90.45%), Postives = 195/199 (97.99%), Query Frame = 3

Query:   60 MTECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            MTECLIGIRFNNFILMASDGNGGRSI+ MRND+DKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSP+AAAHFTRRQL ++LRTRNAYHVNLLLGG+DK+GVPSL+FMDYLGSIV+VPFA+HGYGSYV+LSVLDRKYNPNM K+EA+ LLHDCIKEIQKRFVYNLSNFKVKLID++GISFLEDVAVGK
Sbjct:    1 MTECLIGIRFNNFILMASDGNGGRSIVCMRNDVDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPSAAAHFTRRQLVDTLRTRNAYHVNLLLGGMDKTGVPSLYFMDYLGSIVNVPFAIHGYGSYVSLSVLDRKYNPNMSKDEAVKLLHDCIKEIQKRFVYNLSNFKVKLIDDQGISFLEDVAVGK 199

[Close]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000075365.1 (SMESG000075365.1)

HSP 1 Score: 375.941 bits (964), Expect = 2.262e-134
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 3

Query:  105 MASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            MA DGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK
Sbjct:    1 MACDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 184

[Close]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000075368.1 (SMESG000075368.1)

HSP 1 Score: 350.517 bits (898), Expect = 2.755e-124
Identity = 165/184 (89.67%), Postives = 180/184 (97.83%), Query Frame = 3

Query:  105 MASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK 656
            MASDGNGGRSI+ MRND+DKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSP+AAAHFTRRQL ++LRTRNAYHVNLLLGG+DK+GVPSL+FMDYLGSIV+VPFA+HGYGSYV+LSVLDRKYNPNM K+EA+ LLHDCIKEIQKRFVYNLSNFKVKLID++GISFLEDVAVGK
Sbjct:    1 MASDGNGGRSIVCMRNDVDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPSAAAHFTRRQLVDTLRTRNAYHVNLLLGGMDKTGVPSLYFMDYLGSIVNVPFAIHGYGSYVSLSVLDRKYNPNMSKDEAVKLLHDCIKEIQKRFVYNLSNFKVKLIDDQGISFLEDVAVGK 184

[Close]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Match: SMESG000004962.1 (SMESG000004962.1)

HSP 1 Score: 69.707 bits (169), Expect = 4.513e-14
Identity = 50/185 (27.03%), Postives = 89/185 (48.11%), Query Frame = 3

Query:   72 LIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGDSGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESL-RTRNAYHVNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNPNMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEG 623
            ++G+RF + +++ +D       I    +  KI+ ++D +     G + DT      I   V+L++++N     P  A     R L + L R +      L+LGG+D  G P L  +   GS   +P+   G GS   +S L+  Y PN+ +EEA+ L+   I++     + + SN  + +I +EG
Sbjct:    8 IVGVRFADGVVLGADTRATEGNIVAEKNCQKIHYIADNIYCCGAGTAADTEFVTRIISSKVELHRLQNDPLRKPRVA--MATRMLKQYLFRYQGYVGAALILGGVDFEG-PKLLSIHPHGSSDALPYVTMGSGSLAAVSELESLYRPNLTREEAMELVRRAIRKGIDHDMGSGSNVDLCIITKEG 189

The following BLAST results are available for this feature:

BLAST of Proteasome subunit beta vs. Ensembl Human
BLAST of Proteasome subunit beta vs. Ensembl Celegans
BLAST of Proteasome subunit beta vs. Ensembl Fly
BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
BLAST of Proteasome subunit beta vs. Ensembl Xenopus
BLAST of Proteasome subunit beta vs. Ensembl Mouse
BLAST of Proteasome subunit beta vs. UniProt/SwissProt
BLAST of Proteasome subunit beta vs. TrEMBL
BLAST of Proteasome subunit beta vs. Ensembl Cavefish
BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
BLAST of Proteasome subunit beta vs. Ensembl Yeast
BLAST of Proteasome subunit beta vs. Ensembl Nematostella
BLAST of Proteasome subunit beta vs. Ensembl Medaka
BLAST of Proteasome subunit beta vs. Planmine SMEST

BLAST of Proteasome subunit beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PSMB2	3.255e-69	51.27	proteasome 20S subunit beta 2 [Source:HGNC Symbol;...	[more]
PSMB2	2.971e-20	48.15	proteasome 20S subunit beta 2 [Source:HGNC Symbol;...	[more]
PSMB4	3.470e-10	22.75	proteasome 20S subunit beta 4 [Source:HGNC Symbol;...	[more]
PSMB1	8.415e-10	26.02	proteasome 20S subunit beta 1 [Source:HGNC Symbol;...	[more]
PSMB10	1.119e-9	23.60	proteasome 20S subunit beta 10 [Source:HGNC Symbol...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3


Match Name	E-value	Identity	Description
pbs-4	2.364e-40	36.60	Proteasome subunit beta type-2 [Source:UniProtKB/...	[more]
pbs-2	3.942e-10	22.84	Proteasome subunit beta [Source:UniProtKB/TrEMBL;...	[more]
pbs-3	1.842e-7	24.68	Proteasome subunit beta type-3 [Source:UniProtKB/...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Prosbeta4	1.770e-62	44.90	gene:FBgn0032596 transcript:FBtr0335142	[more]
Prosbeta4	1.770e-62	44.90	gene:FBgn0032596 transcript:FBtr0080936	[more]
Prosbeta4R2	3.224e-51	39.29	gene:FBgn0031443 transcript:FBtr0077699	[more]
Prosbeta4R2	3.224e-51	39.29	gene:FBgn0031443 transcript:FBtr0332513	[more]
Prosbeta4R1	4.918e-43	35.75	gene:FBgn0031442 transcript:FBtr0077697	[more]

BLAST of Proteasome subunit beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmb2	1.431e-77	53.30	proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB...	[more]
psmb2	4.561e-66	54.27	proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB...	[more]
psmb1	3.076e-10	26.02	proteasome 20S subunit beta 1 [Source:ZFIN;Acc:ZDB...	[more]
psmb10	1.084e-8	24.84	proteasome 20S subunit beta 10 [Source:ZFIN;Acc:ZD...	[more]
psmb10	1.084e-8	24.84	proteasome 20S subunit beta 10 [Source:ZFIN;Acc:ZD...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
septin4	1.698e-74	53.97	septin 4 [Source:Xenbase;Acc:XB-GENE-983580]	[more]
rapgef3	1.622e-11	26.71	Rap guanine nucleotide exchange factor 3 [Source:X...	[more]
rapgef3	2.008e-11	26.71	Rap guanine nucleotide exchange factor 3 [Source:X...	[more]
ttc38	1.477e-8	22.75	tetratricopeptide repeat domain 38 [Source:Xenbase...	[more]
psmb1	7.926e-8	23.35	proteasome subunit beta 1 [Source:NCBI gene;Acc:39...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Psmb2	7.123e-71	52.28	proteasome (prosome, macropain) subunit, beta type...	[more]
Psmb4	3.570e-11	23.28	proteasome (prosome, macropain) subunit, beta type...	[more]
Psmb7	7.664e-10	23.32	proteasome (prosome, macropain) subunit, beta type...	[more]
Psmb1	1.004e-9	26.02	proteasome (prosome, macropain) subunit, beta type...	[more]
Psmb1	2.561e-8	27.56	proteasome (prosome, macropain) subunit, beta type...	[more]

BLAST of Proteasome subunit beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9R1P3\|PSB2_MOUSE	4.982e-70	52.28	Proteasome subunit beta type-2 OS=Mus musculus OX=...	[more]
sp\|P40307\|PSB2_RAT	1.636e-69	51.78	Proteasome subunit beta type-2 OS=Rattus norvegicu...	[more]
sp\|P49721\|PSB2_HUMAN	1.563e-68	51.27	Proteasome subunit beta type-2 OS=Homo sapiens OX=...	[more]
sp\|Q5E9K0\|PSB2_BOVIN	1.563e-68	51.27	Proteasome subunit beta type-2 OS=Bos taurus OX=99...	[more]
sp\|P22141\|PSB4_YEAST	2.117e-52	40.41	Proteasome subunit beta type-4 OS=Saccharomyces ce...	[more]

BLAST of Proteasome subunit beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1W4WMT1	1.785e-78	55.38	Proteasome subunit beta OS=Agrilus planipennis OX=...	[more]
A2IAA2	1.261e-76	55.26	Proteasome subunit beta OS=Xenopsylla cheopis OX=1...	[more]
R7THR9	2.924e-76	51.30	Proteasome subunit beta OS=Capitella teleta OX=283...	[more]
A0A1I8GCK1	3.563e-76	57.22	Proteasome subunit beta OS=Macrostomum lignano OX=...	[more]
A0A0R3WX87	8.606e-76	56.48	Proteasome subunit beta OS=Hydatigena taeniaeformi...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmb2	2.312e-76	52.55	proteasome 20S subunit beta 2 [Source:NCBI gene;Ac...	[more]
psmb4	6.962e-11	22.40	proteasome 20S subunit beta 4 [Source:NCBI gene;Ac...	[more]
psmb10	1.109e-10	25.00	proteasome subunit beta type-7-like [Source:NCBI g...	[more]
psmb13a	6.019e-10	22.34	proteasome subunit beta type-7-like [Source:NCBI g...	[more]
psmb1	2.666e-9	25.51	proteasome 20S subunit beta 1 [Source:NCBI gene;Ac...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
psmb2	2.288e-65	53.66	proteasome 20S subunit beta 2 [Source:ZFIN;Acc:ZDB...	[more]
psmb4	1.099e-17	26.80	proteasome 20S subunit beta 4 [Source:ZFIN;Acc:ZDB...	[more]
psmb7	1.876e-14	25.12	proteasome 20S subunit beta 7 [Source:ZFIN;Acc:ZDB...	[more]
ENSPMAT00000009464.1	9.454e-7	22.67	pep scaffold:Pmarinus_7.0:GL476605:530828:534431:-...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4


Match Name	E-value	Identity	Description
PRE1	3.049e-54	40.41	Beta 4 subunit of the 20S proteasome; localizes to...	[more]
PUP1	2.856e-12	25.77	Beta 2 subunit of the 20S proteasome; endopeptidas...	[more]
PRE3	3.490e-9	19.88	Beta 1 subunit of the 20S proteasome; responsible ...	[more]
PUP3	1.378e-6	24.68	Beta 3 subunit of the 20S proteasome; involved in ...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO32854	1.252e-73	54.01	Proteasome subunit beta type [Source:UniProtKB/Tr...	[more]
EDO40407	4.321e-16	26.94	Proteasome subunit beta type [Source:UniProtKB/Tr...	[more]
EDO34100	3.505e-13	25.26	Proteasome subunit beta type [Source:UniProtKB/Tr...	[more]
EDO34642	6.062e-9	22.96	Proteasome subunit beta type [Source:UniProtKB/Tr...	[more]
EDO42974	2.561e-6	23.33	Proteasome subunit beta type [Source:UniProtKB/Tr...	[more]

BLAST of Proteasome subunit beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmb2	8.235e-77	53.57	proteasome 20S subunit beta 2 [Source:NCBI gene;Ac...	[more]
psmb4	1.019e-10	22.40	proteasome 20S subunit beta 4 [Source:NCBI gene;Ac...	[more]
psmb1	5.807e-10	25.00	proteasome 20S subunit beta 1 [Source:NCBI gene;Ac...	[more]
psmb8	1.784e-7	23.24	proteasome 20S subunit beta 8 [Source:NCBI gene;Ac...	[more]
psmb8	2.465e-7	23.37	proteasome 20S subunit beta 8 [Source:NCBI gene;Ac...	[more]

BLAST of Proteasome subunit beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000075365.1	1.201e-145	98.99	SMESG000075365.1	[more]
SMESG000075368.1	2.514e-136	90.45	SMESG000075368.1	[more]
SMESG000075365.1	2.262e-134	99.46	SMESG000075365.1	[more]
SMESG000075368.1	2.755e-124	89.67	SMESG000075368.1	[more]
SMESG000004962.1	4.513e-14	27.03	SMESG000004962.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30021541 ID=SMED30021541|Name=Proteasome subunit beta|organism=Schmidtea mediterranea sexual|type=transcript|length=719bp
CAATAATCTGGCTATTTGACGTTATTTTTAAAAAAAGCTAAATACTAAAG
TTATTAATAATGACGGAATGTCTGATCGGTATTCGATTTAATAATTTTAT
TTTAATGGCAAGTGATGGAAATGGAGGCAGATCAATCATAGCCATGAGAA
ATGATATTGATAAAATTTATGAGCTATCTGACAAATTAGCACTAGGAATT
TGTGGGGATTCAGGAGATACAGTTAGTTTTGCAGAATTTATTTTGCAAAA
TGTGCAATTGTACAAAATTAGAAATGGTTACGAAATGTCTCCAAACGCAG
CTGCTCATTTTACTCGCCGACAATTAGCTGAAAGTTTGAGAACAAGAAAT
GCATATCATGTCAACTTACTTCTTGGTGGAATTGATAAATCTGGAGTTCC
ATCACTACATTTTATGGATTATTTAGGATCAATTGTAGATGTTCCATTTG
CTGTTCATGGGTATGGCAGCTATGTAACTTTGTCGGTATTAGATCGAAAA
TATAATCCAAATATGTGCAAAGAAGAAGCCATTGGATTGCTGCATGATTG
TATTAAGGAGATTCAGAAAAGATTTGTTTACAATCTGAGCAACTTCAAGG
TAAAGCTGATTGATGAGGAAGGAATCAGTTTTTTGGAGGACGTTGCAGTT
GGGAAATAAAGTTGTAATGATAAAAATTGTTTATTTGTTTCACAATAAAT
TTTTCGTTTCAAAAAAAAA

protein sequence of SMED30021541-orf-1

>SMED30021541-orf-1 ID=SMED30021541-orf-1|Name=SMED30021541-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=200bp
MTECLIGIRFNNFILMASDGNGGRSIIAMRNDIDKIYELSDKLALGICGD
SGDTVSFAEFILQNVQLYKIRNGYEMSPNAAAHFTRRQLAESLRTRNAYH
VNLLLGGIDKSGVPSLHFMDYLGSIVDVPFAVHGYGSYVTLSVLDRKYNP
NMCKEEAIGLLHDCIKEIQKRFVYNLSNFKVKLIDEEGISFLEDVAVGK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR035206	Proteasome_beta2
IPR001353	Proteasome_sua/b
IPR029055	Ntn_hydrolases_N
IPR016050	Proteasome_bsu_CS
IPR023333	Proteasome_suB-type

Vocabulary: **molecular function**
Term	Definition
GO:0004298	threonine-type endopeptidase activity
GO:0004175	endopeptidase activity
GO:0008233	peptidase activity
GO:0016787	hydrolase activity

Vocabulary: **cellular component**
Term	Definition
GO:0005839	proteasome core complex
GO:0000502	proteasome complex
GO:0005634	nucleus
GO:0005737	cytoplasm

Vocabulary: **biological process**
Term	Definition
GO:0051603	proteolysis involved in cellular protein catabolic process
GO:0006508	proteolysis

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 4..183 e-value: 5.0E-40 score: 137.0
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	G3DSA:3.60.20.10		coord: 2..198 e-value: 2.1E-48 score: 166.5
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 4..195
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 3..192
IPR035206	Proteasome subunit beta 2	PANTHER	PTHR11599:SF6	PROTEASOME SUBUNIT BETA TYPE-2	coord: 3..192
IPR035206	Proteasome subunit beta 2	CDD	cd03758	proteasome_beta_type_2	coord: 3..194 e-value: 9.60106E-98 score: 279.855
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 6..53
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 2..184 score: 36.948