40S ribosomal protein S9

Overview


Name	40S ribosomal protein S9
Smed ID	SMED30021513
Length (bp)	681

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of 40S ribosomal protein S9 (SMED30021513) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S9 (SMED30021513) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S9 (SMED30021513) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S9 (SMED30021513) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30021513

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 15

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30021513	h1SMcG0013809	SmedASXL_018649	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
Smed sexual biotype	SMED30021513	h1SMcG0013809	Contig47187	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30021513	h1SMcG0013809	Contig47187	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
pharynx	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30021513	h1SMcG0013809	dd_Smed_v4_92_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gamma neoblast	SMED30021513	h1SMcG0013809	dd_Smed_v6_92_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
neoblast	SMED30021513	h1SMcG0013809	dd_Smed_v6_92_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of 40S ribosomal protein S9 vs. Ensembl Human
Match: RPS9 (ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:10442])

HSP 1 Score: 296.59 bits (758), Expect = 1.385e-102
Identity = 147/170 (86.47%), Postives = 158/170 (92.94%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

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BLAST of 40S ribosomal protein S9 vs. Ensembl Celegans
Match: rps-9 (40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228])

HSP 1 Score: 294.278 bits (752), Expect = 3.604e-102
Identity = 144/179 (80.45%), Postives = 161/179 (89.94%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            M+R+  V  K   +PRRPFEKERLD E+KLIG FGL+NKREVWRVKYTLAK+RKAARELLTL++KDPKRLFEGNALLRRLVKIGVL E +MKLDYVLGLK+EDFLERRLQTQVFKLGLA+SIHHAR+LI Q HIRVR+Q+V+VPSFIVRLDS KHIDFS +SPYGGGR GRVKR+  RK
Sbjct:    1 MARLKTVQSKVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRK 179

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BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Match: RpS9 (gene:FBgn0010408 transcript:FBtr0076425)

HSP 1 Score: 302.753 bits (774), Expect = 2.412e-105
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS KSP+GGGR GRVKRKN +K
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Match: RpS9 (gene:FBgn0010408 transcript:FBtr0076423)

HSP 1 Score: 302.753 bits (774), Expect = 2.412e-105
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS KSP+GGGR GRVKRKN +K
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Match: RpS9 (gene:FBgn0010408 transcript:FBtr0342577)

HSP 1 Score: 302.753 bits (774), Expect = 2.412e-105
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS KSP+GGGR GRVKRKN +K
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Match: RpS9 (gene:FBgn0010408 transcript:FBtr0076424)

HSP 1 Score: 229.18 bits (583), Expect = 3.388e-77
Identity = 114/133 (85.71%), Postives = 122/133 (91.73%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIR 481
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIR
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Match: CG4866 (gene:FBgn0034232 transcript:FBtr0086940)

HSP 1 Score: 46.2098 bits (108), Expect = 4.458e-6
Identity = 32/122 (26.23%), Postives = 60/122 (49.18%), Query Frame = 2

Query:  155 EMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIV 520
            E K++  F ++ + +  +      +IR+ A  +  LD  +P +      LL +L  +GV S +++ L+    +    F  RRL   + KL ++  +  A  LI   H+RV  +M+  P+F+V
Sbjct:   29 ENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV-SNDQLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149

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BLAST of 40S ribosomal protein S9 vs. Ensembl Zebrafish
Match: rps9 (ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15])

HSP 1 Score: 301.212 bits (770), Expect = 1.343e-104
Identity = 147/173 (84.97%), Postives = 161/173 (93.06%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            V  KTY TPRRPFEK RLD E++LIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS +SPYGGGR GRVKRKNA+K
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            V  KTY TPRRPFEK RLD E++LIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS +SPYGGGR GRVKRKNA+K
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Zebrafish
Match: rps9 (ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15])

HSP 1 Score: 223.787 bits (569), Expect = 6.111e-75
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIR 481
            V  KTY TPRRPFEK RLD E++LIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIR
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Zebrafish
Match: rps9 (ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15])

HSP 1 Score: 221.861 bits (564), Expect = 2.920e-74
Identity = 110/128 (85.94%), Postives = 119/128 (92.97%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHI 478
            V  KTY TPRRPFEK RLD E++LIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHI
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 135

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHI 478
            V  KTY TPRRPFEK RLD E++LIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHI
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELRLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 135

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Xenopus
Match: ENSXETT00000002668.1 (ribosomal protein S9 [Source:NCBI gene;Acc:448529])

HSP 1 Score: 189.889 bits (481), Expect = 1.936e-61
Identity = 93/114 (81.58%), Postives = 104/114 (91.23%), Query Frame = 2

Query:  263 DEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            +  D  R+++GNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    1 NSNDEFRVYKGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 114

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Xenopus
Match: ENSXETT00000026300.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:7:101489596:101490713:-1 gene:ENSXETG00000013777.1 transcript:ENSXETT00000026300.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 53.1434 bits (126), Expect = 4.390e-9
Identity = 36/81 (44.44%), Postives = 44/81 (54.32%), Query Frame = 2

Query:  236 KAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHI 478
            +AARELLTL EK+P+RL E            VL E +MKLDY+LGLKI            +K    RS+    VL+ QRHI
Sbjct:    1 RAARELLTLGEKEPERLCE------------VLEEWKMKLDYILGLKIS-------WNTTYK---HRSLSWTHVLMRQRHI 59

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Xenopus
Match: imp3 (IMP3, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:448133])

HSP 1 Score: 51.9878 bits (123), Expect = 8.759e-8
Identity = 40/123 (32.52%), Postives = 68/123 (55.28%), Query Frame = 2

Query:  155 EMKLIGMFGLRNKREVWRVKYTLAK-IRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIV 520
            E+K++  + L +KRE +     L++ IR+ A+++  LDEKD  R+     LL +L  +G++   +  L     +    F  RRL T V KL +A+++  A   I Q HIRV  +++  P+F+V
Sbjct:   29 EVKVLRKYHL-DKREDYTKYNKLSRNIRELAQKIRDLDEKDKFRVQSTAKLLEKLYCMGLIPT-KQNLQLCQNVSASSFCRRRLPTIVVKLRMAQNLKTAITFIEQGHIRVGPEVITDPAFLV 149

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BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
Match: Rps9 (ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096])

HSP 1 Score: 296.59 bits (758), Expect = 9.509e-103
Identity = 147/170 (86.47%), Postives = 158/170 (92.94%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
Match: Rps9 (ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096])

HSP 1 Score: 222.631 bits (566), Expect = 1.727e-74
Identity = 112/129 (86.82%), Postives = 120/129 (93.02%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIR 481
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIR
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
Match: Rps9 (ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096])

HSP 1 Score: 221.476 bits (563), Expect = 5.504e-74
Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHI 478
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHI
Sbjct:    4 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 131

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
Match: Rps9 (ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096])

HSP 1 Score: 221.476 bits (563), Expect = 6.281e-74
Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHI 478
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHI
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 135

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BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Match: sp|B4PEU8|RS9_DROYA (40S ribosomal protein S9 OS=Drosophila yakuba OX=7245 GN=RpS9 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 2.418e-104
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS KSP+GGGR GRVKRKN +K
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Match: sp|P55935|RS9_DROME (40S ribosomal protein S9 OS=Drosophila melanogaster OX=7227 GN=RpS9 PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 2.418e-104
Identity = 149/177 (84.18%), Postives = 162/177 (91.53%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            RIP V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKY LAKIRKAARELLTLDEKD KRLF+GNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS KSP+GGGR GRVKRKN +K
Sbjct:    5 RIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Match: sp|P29314|RS9_RAT (40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4)

HSP 1 Score: 296.59 bits (758), Expect = 6.651e-102
Identity = 147/170 (86.47%), Postives = 158/170 (92.94%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Match: sp|A9L913|RS9_PAPAN (40S ribosomal protein S9 OS=Papio anubis OX=9555 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 6.651e-102
Identity = 147/170 (86.47%), Postives = 158/170 (92.94%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Match: sp|Q6ZWN5|RS9_MOUSE (40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3)

HSP 1 Score: 296.59 bits (758), Expect = 6.651e-102
Identity = 147/170 (86.47%), Postives = 158/170 (92.94%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDY+LGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Match: A0A1I8H925 (S4 RNA-binding domain-containing protein OS=Macrostomum lignano OX=282301 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.713e-109
Identity = 156/179 (87.15%), Postives = 171/179 (95.53%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            MSR+P++Y KTYSTPRRPFEKERLDAE+KLIGM+GL+NKREVWRVKYTLAKIRKAARELLTL+EKDP+RLFEGNALLRRLV+IGVL E++MKLDYVLGLKIEDFLERRLQTQV KLGLA+SIHHARVLI QRHIRVR+QMVNVPSF+VRLDS KHIDFS KSP GGGR GRVKRKNAR+
Sbjct:    1 MSRVPRIYSKTYSTPRRPFEKERLDAELKLIGMYGLKNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVLQEDKMKLDYVLGLKIEDFLERRLQTQVLKLGLAKSIHHARVLIRQRHIRVRRQMVNVPSFMVRLDSQKHIDFSLKSPLGGGRPGRVKRKNARE 179

[Close]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Match: A0A267DXB6 (S4 RNA-binding domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003233g2 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 6.181e-109
Identity = 156/179 (87.15%), Postives = 171/179 (95.53%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            MSR+P++Y KTYSTPRRPFEKERLDAE+KLIGM+GL+NKREVWRVKYTLAKIRKAARELLTL+EKDP+RLFEGNALLRRLV+IGVL E++MKLDYVLGLKIEDFLERRLQTQV KLGLA+SIHHARVLI QRHIRVR+QMVNVPSF+VRLDS KHIDFS KSP GGGR GRVKRKNAR+
Sbjct:    2 MSRVPRIYSKTYSTPRRPFEKERLDAELKLIGMYGLKNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVLQEDKMKLDYVLGLKIEDFLERRLQTQVLKLGLAKSIHHARVLIRQRHIRVRRQMVNVPSFMVRLDSQKHIDFSLKSPLGGGRPGRVKRKNARE 180

[Close]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Match: A0A267FSI7 (S4 RNA-binding domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig006462g5 PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.425e-108
Identity = 155/178 (87.08%), Postives = 170/178 (95.51%), Query Frame = 2

Query:   80 SRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            SR+P++Y KTYSTPRRPFEKERLDAE+KLIGM+GL+NKREVWRVKYTLAKIRKAARELLTL+EKDP+RLFEGNALLRRLV+IGVL E++MKLDYVLGLKIEDFLERRLQTQV KLGLA+SIHHARVLI QRHIRVR+QMVNVPSF+VRLDS KHIDFS KSP GGGR GRVKRKNAR+
Sbjct:    1 SRVPRIYSKTYSTPRRPFEKERLDAELKLIGMYGLKNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVLQEDKMKLDYVLGLKIEDFLERRLQTQVLKLGLAKSIHHARVLIRQRHIRVRRQMVNVPSFMVRLDSQKHIDFSLKSPLGGGRPGRVKRKNARE 178

[Close]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Match: A0A267E157 (S4 RNA-binding domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig006462g3 PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 3.996e-107
Identity = 154/177 (87.01%), Postives = 169/177 (95.48%), Query Frame = 2

Query:   83 RIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            R+P++Y KTYSTPRRPFEKERLDAE+KLIGM+GL+NKREVWRVKYTLAKIRKAARELLTL+EKDP+RLFEGNALLRRLV+IGVL E++MKLDYVLGLKIEDFLERRLQTQV KLGLA+SIHHARVLI QRHIRVR+QMVNVPSF+VRLDS KHIDFS KSP GGGR GRVKRKNAR+
Sbjct:    1 RVPRIYSKTYSTPRRPFEKERLDAELKLIGMYGLKNKREVWRVKYTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVLQEDKMKLDYVLGLKIEDFLERRLQTQVLKLGLAKSIHHARVLIRQRHIRVRRQMVNVPSFMVRLDSQKHIDFSLKSPLGGGRPGRVKRKNARE 177

[Close]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Match: G8JKF2 (S4 RNA-binding domain-containing protein OS=Triatoma rubida OX=162364 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 6.816e-106
Identity = 154/178 (86.52%), Postives = 166/178 (93.26%), Query Frame = 2

Query:   80 SRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            SR+P V+ KTY TPRRP+EK RLD E+K+IG +GLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E RMKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSFIVRLDS KHIDFS KSP+GGGR GRVKRKN+RK
Sbjct:    4 SRVPSVHSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLEEGRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLKSPFGGGRHGRVKRKNSRK 181

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Cavefish
Match: rps9 (ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15])

HSP 1 Score: 226.483 bits (576), Expect = 4.617e-76
Identity = 112/129 (86.82%), Postives = 120/129 (93.02%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIR 481
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKDPKRLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIR
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVRIGVLDESKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Cavefish
Match: imp3 (IMP U3 small nucleolar ribonucleoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1062])

HSP 1 Score: 48.9062 bits (115), Expect = 4.845e-7
Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 2

Query:  155 EMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIV 520
            E+K++  + +  + +  +       IR+ A+++  LDEKD  R    +  L +L  IG++   +  L     +    F  RRL T + KL +A+++  A   I Q HIRV  ++V  P+F+V
Sbjct:   29 EVKILRKYHIEKREDYTKYNKLSRNIRELAQKIRDLDEKDGFRAQSTSQFLEKLYCIGLIPT-KQNLALADAVSASCFCRRRLPTIMLKLRMAQNLKAAVTFIEQGHIRVGPEVVTDPAFLV 149

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BLAST of 40S ribosomal protein S9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000223.1 (pep scaffold:Pmarinus_7.0:GL477823:202328:205341:1 gene:ENSPMAG00000000193.1 transcript:ENSPMAT00000000223.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 296.975 bits (759), Expect = 9.152e-104
Identity = 146/173 (84.39%), Postives = 160/173 (92.49%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAAR+LLTLDEKDP+RLFEGNALLRRLV+IGVL E +MKLDYVLGLKIEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PS++VRLDS KHIDFS +SPYGGGR GRVKRKN +K
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARDLLTLDEKDPRRLFEGNALLRRLVRIGVLDESKMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSYMVRLDSQKHIDFSLRSPYGGGRPGRVKRKNMKK 180

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BLAST of 40S ribosomal protein S9 vs. Ensembl Yeast
Match: RPS9B (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication [Source:SGD;Acc:S000000393])

HSP 1 Score: 276.944 bits (707), Expect = 4.791e-96
Identity = 128/177 (72.32%), Postives = 155/177 (87.57%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNA 607
            M R P+ Y KTYSTP+RP+E  RLDAE+KL G FGL+NKRE++R+ + L+KIR+AAR+LLT DEKDPKRLFEGNAL+RRLV++GVLSE++ KLDYVL LK+EDFLERRLQTQV+KLGLA+S+HHARVLI QRHI V KQ+VN+PSF+VRLDS KHIDF+  SP+GG R GRV R+NA
Sbjct:    1 MPRAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRNA 177

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Yeast
Match: RPS9A (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication [Source:SGD;Acc:S000006002])

HSP 1 Score: 276.174 bits (705), Expect = 1.128e-95
Identity = 127/177 (71.75%), Postives = 155/177 (87.57%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNA 607
            M R P+ Y KTYSTP+RP+E  RLDAE+KL G FGL+NK+E++R+ + L+KIR+AAR+LLT DEKDPKRLFEGNAL+RRLV++GVLSE++ KLDYVL LK+EDFLERRLQTQV+KLGLA+S+HHARVLI QRHI V KQ+VN+PSF+VRLDS KHIDF+  SP+GG R GRV R+NA
Sbjct:    1 MPRAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRNA 177

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Yeast
Match: IMP3 (Component of the SSU processome; SSU processome is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA [Source:SGD;Acc:S000001191])

HSP 1 Score: 48.521 bits (114), Expect = 1.027e-7
Identity = 32/136 (23.53%), Postives = 64/136 (47.06%), Query Frame = 2

Query:  155 EMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKS 562
            + +++  + ++N+ +  +       IR+ A +L  L   DP R      LL +L  +GVL+ +    D    + +     RRL   + +L +A +I  A   I Q H+RV   ++N P+++V  +   ++ +   S
Sbjct:   29 DTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKMAETIQDAVKFIEQGHVRVGPNLINDPAYLVTRNMEDYVTWVDNS 164

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
Match: EDO33468 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SS49])

HSP 1 Score: 298.13 bits (762), Expect = 5.909e-104
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            V  KTY+TPRRPFEKERL+ E+K+IG +GLRNKREVWRVK TLAKIRKAARELLTL+EKDP+RLFEGNALLRRLV+IGVL E RMKLDYVLGL+IEDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VNVPSF+VRLDS KHIDFS  SPYGGGR GRVKRKN +K
Sbjct:    5 VCSKTYTTPRRPFEKERLNQELKIIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVLDESRMKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKK 177

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
Match: EDO28709 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5Q2])

HSP 1 Score: 77.0258 bits (188), Expect = 4.317e-19
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 2

Query:  482 VRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            VRKQ+VNVPSF+VRLDS KHIDFS  SPYGGGR GRVKRKN +K
Sbjct:    3 VRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKK 46

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
Match: EDO28708 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5Q2])

HSP 1 Score: 77.0258 bits (188), Expect = 4.317e-19
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 2

Query:  482 VRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            VRKQ+VNVPSF+VRLDS KHIDFS  SPYGGGR GRVKRKN +K
Sbjct:    3 VRKQLVNVPSFVVRLDSQKHIDFSLNSPYGGGRPGRVKRKNMKK 46

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
Match: EDO45146 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTU1])

HSP 1 Score: 44.2838 bits (103), Expect = 7.898e-6
Identity = 28/97 (28.87%), Postives = 50/97 (51.55%), Query Frame = 2

Query:  230 IRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIV 520
            I+  A ++  LD KDP R+     +L +L  +G++S ++  L     +    F  RRL   +  L +A+ +  A   I Q H+RV  +++  P+F+V
Sbjct:   54 IKSLANKIKDLDPKDPYRVEATEQILEKLHNMGLISTKK-NLGQCNKVNASSFCRRRLPVVMVNLKMAQVVKDAVKYIEQGHVRVGPEVIMDPAFLV 149

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
Match: rps9 (ribosomal protein S9 [Source:NCBI gene;Acc:101162867])

HSP 1 Score: 293.893 bits (751), Expect = 8.915e-102
Identity = 144/170 (84.71%), Postives = 157/170 (92.35%), Query Frame = 2

Query:   95 VYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
            V  KTY TPRRPFEK RLD E+KLIG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKD +RLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:    8 VCSKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDSRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
Match: rps9 (ribosomal protein S9 [Source:NCBI gene;Acc:101162867])

HSP 1 Score: 258.07 bits (658), Expect = 2.004e-87
Identity = 126/147 (85.71%), Postives = 138/147 (93.88%), Query Frame = 2

Query:  164 LIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKN 604
             IG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKD +RLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIRVRKQ+VN+PSF+VRLDS KHIDFS +SPYGGGR GRVKRKN
Sbjct:   47 FIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDSRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 193

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
Match: rps9 (ribosomal protein S9 [Source:NCBI gene;Acc:101162867])

HSP 1 Score: 184.111 bits (466), Expect = 5.470e-59
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 2

Query:  164 LIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIR 481
             IG +GLRNKREVWRVK+TLAKIRKAARELLTLDEKD +RLFEGNALLRRLV+IGVL E +MKLDY+LGLK+EDFLERRLQTQVFKLGLA+SIHHARVLI QRHIR
Sbjct:   47 FIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDSRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 152

[Close]

BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
Match: imp3 (IMP U3 small nucleolar ribonucleoprotein 3 [Source:NCBI gene;Acc:101155298])

HSP 1 Score: 50.447 bits (119), Expect = 1.628e-7
Identity = 35/122 (28.69%), Postives = 60/122 (49.18%), Query Frame = 2

Query:  155 EMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIV 520
            E+K++  F + N+ +  +       IR  A+++  LDEKD  R    + LL +L  IG++   R  L     +    F  RRL   +  L +A+++  A   + Q H+RV   +V  P+F+V
Sbjct:   29 EVKVLRRFRIENREDYTKYNKLSRNIRDLAQKIRDLDEKDGFRAQSSHRLLEKLYSIGLIPT-RQNLSLTEKVTASSFCRRRLPCIMLSLRMAQNLKTAITFVQQGHVRVGPDIVTDPAFLV 149

[Close]

BLAST of 40S ribosomal protein S9 vs. Planmine SMEST
Match: SMESG000058106.1 (SMESG000058106.1)

HSP 1 Score: 358.992 bits (920), Expect = 7.480e-128
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 2

Query:   77 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 613
            MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK
Sbjct:    1 MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLAKIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLKIEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRLDSGKHIDFSTKSPYGGGRAGRVKRKNARK 179

The following BLAST results are available for this feature:

BLAST of 40S ribosomal protein S9 vs. Ensembl Human
BLAST of 40S ribosomal protein S9 vs. Ensembl Celegans
BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
BLAST of 40S ribosomal protein S9 vs. Ensembl Zebrafish
BLAST of 40S ribosomal protein S9 vs. Ensembl Xenopus
BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
BLAST of 40S ribosomal protein S9 vs. TrEMBL
BLAST of 40S ribosomal protein S9 vs. Ensembl Cavefish
BLAST of 40S ribosomal protein S9 vs. Ensembl Sea Lamprey
BLAST of 40S ribosomal protein S9 vs. Ensembl Yeast
BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
BLAST of 40S ribosomal protein S9 vs. Planmine SMEST

BLAST of 40S ribosomal protein S9 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RPS9	1.385e-102	86.47	ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:...	[more]
RPS9	1.385e-102	86.47	ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:...	[more]
RPS9	1.385e-102	86.47	ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:...	[more]
RPS9	1.385e-102	86.47	ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:...	[more]
RPS9	1.385e-102	86.47	ribosomal protein S9 [Source:HGNC Symbol;Acc:HGNC:...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1


Match Name	E-value	Identity	Description
rps-9	3.604e-102	80.45	40S ribosomal protein S9 [Source:UniProtKB/Swiss-...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RpS9	2.412e-105	84.18	gene:FBgn0010408 transcript:FBtr0076425	[more]
RpS9	2.412e-105	84.18	gene:FBgn0010408 transcript:FBtr0076423	[more]
RpS9	2.412e-105	84.18	gene:FBgn0010408 transcript:FBtr0342577	[more]
RpS9	3.388e-77	85.71	gene:FBgn0010408 transcript:FBtr0076424	[more]
CG4866	4.458e-6	26.23	gene:FBgn0034232 transcript:FBtr0086940	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rps9	1.343e-104	84.97	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]
rps9	1.343e-104	84.97	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]
rps9	6.111e-75	86.05	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]
rps9	2.920e-74	85.94	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]
rps9	2.920e-74	85.94	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3


Match Name	E-value	Identity	Description
ENSXETT00000002668.1	1.936e-61	81.58	ribosomal protein S9 [Source:NCBI gene;Acc:448529]	[more]
ENSXETT00000026300.1	4.390e-9	44.44	pep primary_assembly:Xenopus_tropicalis_v9.1:7:101...	[more]
imp3	8.759e-8	32.52	IMP3, U3 small nucleolar ribonucleoprotein [Source...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rps9	9.509e-103	86.47	ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:19...	[more]
Rps9	9.509e-103	86.47	ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:19...	[more]
Rps9	1.727e-74	86.82	ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:19...	[more]
Rps9	5.504e-74	86.72	ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:19...	[more]
Rps9	6.281e-74	86.72	ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:19...	[more]

BLAST of 40S ribosomal protein S9 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|B4PEU8\|RS9_DROYA	2.418e-104	84.18	40S ribosomal protein S9 OS=Drosophila yakuba OX=7...	[more]
sp\|P55935\|RS9_DROME	2.418e-104	84.18	40S ribosomal protein S9 OS=Drosophila melanogaste...	[more]
sp\|P29314\|RS9_RAT	6.651e-102	86.47	40S ribosomal protein S9 OS=Rattus norvegicus OX=1...	[more]
sp\|A9L913\|RS9_PAPAN	6.651e-102	86.47	40S ribosomal protein S9 OS=Papio anubis OX=9555 G...	[more]
sp\|Q6ZWN5\|RS9_MOUSE	6.651e-102	86.47	40S ribosomal protein S9 OS=Mus musculus OX=10090 ...	[more]

BLAST of 40S ribosomal protein S9 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8H925	5.713e-109	87.15	S4 RNA-binding domain-containing protein OS=Macros...	[more]
A0A267DXB6	6.181e-109	87.15	S4 RNA-binding domain-containing protein (Fragment...	[more]
A0A267FSI7	4.425e-108	87.08	S4 RNA-binding domain-containing protein (Fragment...	[more]
A0A267E157	3.996e-107	87.01	S4 RNA-binding domain-containing protein (Fragment...	[more]
G8JKF2	6.816e-106	86.52	S4 RNA-binding domain-containing protein OS=Triato...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
rps9	4.617e-76	86.82	ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010...	[more]
imp3	4.845e-7	28.69	IMP U3 small nucleolar ribonucleoprotein 3 [Source...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000000223.1	9.152e-104	84.39	pep scaffold:Pmarinus_7.0:GL477823:202328:205341:1...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3


Match Name	E-value	Identity	Description
RPS9B	4.791e-96	72.32	Protein component of the small (40S) ribosomal sub...	[more]
RPS9A	1.128e-95	71.75	Protein component of the small (40S) ribosomal sub...	[more]
IMP3	1.027e-7	23.53	Component of the SSU processome; SSU processome is...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4


Match Name	E-value	Identity	Description
EDO33468	5.909e-104	84.97	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28709	4.317e-19	81.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28708	4.317e-19	81.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45146	7.898e-6	28.87	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of 40S ribosomal protein S9 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4


Match Name	E-value	Identity	Description
rps9	8.915e-102	84.71	ribosomal protein S9 [Source:NCBI gene;Acc:1011628...	[more]
rps9	2.004e-87	85.71	ribosomal protein S9 [Source:NCBI gene;Acc:1011628...	[more]
rps9	5.470e-59	86.79	ribosomal protein S9 [Source:NCBI gene;Acc:1011628...	[more]
imp3	1.628e-7	28.69	IMP U3 small nucleolar ribonucleoprotein 3 [Source...	[more]

BLAST of 40S ribosomal protein S9 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1


Match Name	E-value	Identity	Description
SMESG000058106.1	7.480e-128	100.00	SMESG000058106.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30021513 ID=SMED30021513|Name=40S ribosomal protein S9|organism=Schmidtea mediterranea sexual|type=transcript|length=681bp
AAACATTATTGTGTTTGAAAATATTTGTTTAAATATACTGTTTAGTTATA
GATTTAAAAGTTCAAATTAATTGAAAATGAGTAGAATTCCAAAAGTTTAT
GGCAAGACTTATTCAACACCACGTCGTCCCTTTGAAAAAGAACGATTGGA
TGCTGAAATGAAATTAATCGGCATGTTTGGTTTAAGAAACAAGAGAGAAG
TATGGAGAGTAAAATATACTCTTGCTAAAATTCGAAAAGCTGCCAGAGAA
TTGCTTACTCTTGATGAAAAAGATCCTAAGAGATTATTTGAAGGTAACGC
TTTATTAAGAAGATTAGTCAAAATTGGTGTTTTGAGTGAAGAACGTATGA
AGCTCGATTATGTTCTTGGTCTTAAAATCGAAGATTTCTTGGAAAGGCGT
TTACAAACTCAAGTTTTCAAATTGGGACTTGCGCGATCAATCCATCATGC
TCGAGTATTAATTTTACAGCGACATATTAGAGTTCGTAAGCAAATGGTTA
ATGTACCAAGCTTTATTGTTCGATTGGACAGTGGTAAACACATCGATTTC
TCCACCAAATCACCATACGGTGGAGGAAGAGCTGGTCGTGTTAAGAGGAA
GAATGCCAGAAAAGAAACTGAAGTTGAAGAAGATGAGGAATGATTTATTT
AATTAATAAATTTTTGGATCAATAAAAAAAA

protein sequence of SMED30021513-orf-1

>SMED30021513-orf-1 ID=SMED30021513-orf-1|Name=SMED30021513-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=189bp
MSRIPKVYGKTYSTPRRPFEKERLDAEMKLIGMFGLRNKREVWRVKYTLA
KIRKAARELLTLDEKDPKRLFEGNALLRRLVKIGVLSEERMKLDYVLGLK
IEDFLERRLQTQVFKLGLARSIHHARVLILQRHIRVRKQMVNVPSFIVRL
DSGKHIDFSTKSPYGGGRAGRVKRKNARKETEVEEDEE*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000039	gamma neoblast
PLANA:0000429	neoblast
PLANA:0002032	epidermal cell
PLANA:0002109	X1 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036986	S4_RNA-bd_sf
IPR005710	Ribosomal_S4/S9_euk/arc
IPR022801	Ribosomal_S4/S9
IPR001912	Ribosomal_S4/S9_N
IPR002942	S4_RNA-bd
IPR018079	Ribosomal_S4_CS

Vocabulary: **cellular component**
Term	Definition
GO:0005622	intracellular
GO:0000228	nuclear chromosome
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022626	cytosolic ribosome
GO:0030529	intracellular ribonucleoprotein complex

Vocabulary: **molecular function**
Term	Definition
GO:0019843	rRNA binding
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **biological process**
Term	Definition
GO:0006412	translation

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 169..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..188
None	No IPR available	PANTHER	PTHR11831:SF24	40S RIBOSOMAL PROTEIN S9	coord: 7..180
None	No IPR available	SUPERFAMILY	SSF55174	Alpha-L RNA-binding motif	coord: 10..164
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 107..171 e-value: 0.0034 score: 26.6
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 107..149 e-value: 1.4E-8 score: 34.3
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 107..187 score: 9.02
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 107..149 e-value: 1.44834E-5 score: 39.5402
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 6..106 e-value: 2.7E-22 score: 90.0
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 15..62 e-value: 1.1E-5 score: 26.3
IPR036986	RNA-binding S4 domain superfamily	GENE3D	G3DSA:3.10.290.10		coord: 108..185 e-value: 3.5E-11 score: 45.1
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAM	TIGR01018	TIGR01018	coord: 6..164 e-value: 1.5E-69 score: 231.0
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 7..180
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 105..129