TTF-type domain-containing protein

Overview
NameTTF-type domain-containing protein
Smed IDSMED30021431
Length (bp)3364
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of TTF-type domain-containing protein (SMED30021431) t-SNE clustered cells

Violin plots show distribution of expression levels for TTF-type domain-containing protein (SMED30021431) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of TTF-type domain-containing protein (SMED30021431) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for TTF-type domain-containing protein (SMED30021431) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30021431

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30021431 dd_Smed_v4_3830_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Human
Match: ZMYM1 (zinc finger MYM-type containing 1 [Source:HGNC Symbol;Acc:HGNC:26253])

HSP 1 Score: 53.5286 bits (127), Expect = 3.348e-13
Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFV-----KERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDT----LARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            K  ++  +P  T  V     K RS +     D   LE + +KD  FC+ C +  Q  +     +F T G  NW + L+K   F KH KS+ H+K+++ W  +      D  ++      L I  K+ +  ++ L LI      L +  L  R N++S  S N+G FL++  + A+
Sbjct:  432 KISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLE-NSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLEK---FRKHEKSEMHLKSLEFWREYQ---FCDGAVS----DDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK 595

HSP 2 Score: 42.743 bits (99), Expect = 3.348e-13
Identity = 34/129 (26.36%), Postives = 56/129 (43.41%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I      + + + QLS  VRY   S   I         +D E +T  ++ + +   L  I    D     I GQ YD  + ++  ++ + A  K+    A Y+HC++H L+L +
Sbjct:  630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMD----KIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSI 754
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Human
Match: ZMYM1 (zinc finger MYM-type containing 1 [Source:HGNC Symbol;Acc:HGNC:26253])

HSP 1 Score: 53.5286 bits (127), Expect = 3.348e-13
Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFV-----KERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDT----LARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            K  ++  +P  T  V     K RS +     D   LE + +KD  FC+ C +  Q  +     +F T G  NW + L+K   F KH KS+ H+K+++ W  +      D  ++      L I  K+ +  ++ L LI      L +  L  R N++S  S N+G FL++  + A+
Sbjct:  432 KISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLE-NSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLEK---FRKHEKSEMHLKSLEFWREYQ---FCDGAVS----DDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK 595

HSP 2 Score: 42.743 bits (99), Expect = 3.348e-13
Identity = 34/129 (26.36%), Postives = 56/129 (43.41%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I      + + + QLS  VRY   S   I         +D E +T  ++ + +   L  I    D     I GQ YD  + ++  ++ + A  K+    A Y+HC++H L+L +
Sbjct:  630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMD----KIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSI 754
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Human
Match: ZMYM1 (zinc finger MYM-type containing 1 [Source:HGNC Symbol;Acc:HGNC:26253])

HSP 1 Score: 53.5286 bits (127), Expect = 3.348e-13
Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFV-----KERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDT----LARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            K  ++  +P  T  V     K RS +     D   LE + +KD  FC+ C +  Q  +     +F T G  NW + L+K   F KH KS+ H+K+++ W  +      D  ++      L I  K+ +  ++ L LI      L +  L  R N++S  S N+G FL++  + A+
Sbjct:  432 KISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLE-NSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLEK---FRKHEKSEMHLKSLEFWREYQ---FCDGAVS----DDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK 595

HSP 2 Score: 42.743 bits (99), Expect = 3.348e-13
Identity = 34/129 (26.36%), Postives = 56/129 (43.41%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I      + + + QLS  VRY   S   I         +D E +T  ++ + +   L  I    D     I GQ YD  + ++  ++ + A  K+    A Y+HC++H L+L +
Sbjct:  630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMD----KIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSI 754
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Human
Match: ZMYM1 (zinc finger MYM-type containing 1 [Source:HGNC Symbol;Acc:HGNC:26253])

HSP 1 Score: 53.5286 bits (127), Expect = 3.348e-13
Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFV-----KERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDT----LARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            K  ++  +P  T  V     K RS +     D   LE + +KD  FC+ C +  Q  +     +F T G  NW + L+K   F KH KS+ H+K+++ W  +      D  ++      L I  K+ +  ++ L LI      L +  L  R N++S  S N+G FL++  + A+
Sbjct:  432 KISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLE-NSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLEK---FRKHEKSEMHLKSLEFWREYQ---FCDGAVS----DDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK 595

HSP 2 Score: 42.743 bits (99), Expect = 3.348e-13
Identity = 34/129 (26.36%), Postives = 56/129 (43.41%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I      + + + QLS  VRY   S   I         +D E +T  ++ + +   L  I    D     I GQ YD  + ++  ++ + A  K+    A Y+HC++H L+L +
Sbjct:  630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMD----KIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSI 754
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Zebrafish
Match: CR762475.1 (pep chromosome:GRCz11:4:55494751:55498830:1 gene:ENSDARG00000098243.2 transcript:ENSDART00000172605.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR762475.1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.293e-35
Identity = 57/154 (37.01%), Postives = 84/154 (54.55%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLV-VDICSKNVMARNFFGIVQKLICFIECSTKRHGVF 1484
            I  +I+  + F I L    D+S + Q+SFVVRYV   ++  E  L +    E+   K L  ++ S+ +     + NIRGQGYDG + M   Y GL + ++  ++ A YVHC +H LNLV V+    ++    FF +V+KL  F   STKRH  F
Sbjct:  395 IQNEIKEAQIFSILLDETTDVSHKEQVSFVVRYVR-DMEVKERFLQV-CTLESTTGKELENVVISLLQDNGLDLKNIRGQGYDGAANMSGMYKGLQSRIRAHNEKALYVHCQAHCLNLVLVESAKSSIHFVTFFSLVEKLYVFCTGSTKRHTAF 546

HSP 2 Score: 79.337 bits (194), Expect = 2.293e-35
Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 2 
Query:  473 RSFQVQWYKDRPWLEYHDEKDSVFCFDC*VI---GQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECK--RQLEIGCKERQQRQEILS-LIDT---LARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQK 955
            RSFQ  WY DRPWLEY  + D+++CF C +     + K  T ++T G   W  A  K K   +H+ ++ H+ +M  W+ + +  L   Q A +    +   I  +ERQ+ +EIL+ LID    LAR    FR +++S+ S+N+G F+++   +A+++  +  HL    +K
Sbjct:  200 RSFQRSWYTDRPWLEYSPKNDAIYCFSCRIFLREEKFKNKTAWKTLGINTWRSATGKMK---EHASTEAHMMSMVRWNIYSKKAL---QTAFDTSDIQGKAIRERERQRNREILTRLIDISLYLARQGQAFRGDDESSSSANQGNFIELVKTLAQYDSVMKLHLDAIQEK 363
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Xenopus
Match: tbx18 (T-box 18 [Source:Xenbase;Acc:XB-GENE-489907])

HSP 1 Score: 78.1814 bits (191), Expect = 4.344e-14
Identity = 54/164 (32.93%), Postives = 83/164 (50.61%), Query Frame = 3 
Query: 1056 FEIYLVTAQDLSKQNQLSFVVRYVNLSLDNI---EALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVVDICSKNVMARNFFGIVQKLICFIECSTKRHGVFQDIIDP---KSVWMSNYK 1529
            F +    + D+S   QLS  VR+V+L++  +   E  L      +A  A  +  ++     K+  +I  + GQGYDGCSTM     G+ A +KE    A +VHC SH+LNLVV+  +     RN  G V+ +I F   S KR  +  ++  P   ++ W + YK
Sbjct:  150 FSVIADESADISGHEQLSLGVRFVDLTITPVKIREEFLGFA-TLKAFDATSIANVIMEQCIKFGLNIDKLYGQGYDGCSTMAGKEGGVQAKIKEKYPRAIFVHCASHKLNLVVNNLNAVPEIRNAIGSVKAIIKFFRESPKRRSLIPNV--PLLCETRWTAKYK 310
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Xenopus
Match: slc10a6 (solute carrier family 10 (sodium/bile acid cotransporter), member 6 [Source:Xenbase;Acc:XB-GENE-988401])

HSP 1 Score: 72.4034 bits (176), Expect = 2.444e-12
Identity = 53/188 (28.19%), Postives = 94/188 (50.00%), Query Frame = 3 
Query:  987 PLNIR*SKLSLPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVVDICSKNVMARNFFGIVQKLICFIECSTKRHGVFQDI-IDPKSVWMSNYK 1529
            P+N R + +    +  ++ ++  F +    + D+S   QLS  VR+V+L++  ++          ++ V   +IA  ++E       K+  ++  + GQGYDGCSTM     G+ A +KE    A +V+C SH+LNLVV+        RN  G  + +I F   S KR  +  ++ +  ++ W + YK
Sbjct:  180 PVNARYTSVR---VENELIVLSGFSVIADESADISGHEQLSLGVRFVDLTITPVKIREEFLGFATLKAVDATSIANVIMEQCI----KFGLNMDKLYGQGYDGCSTMAGKEGGVQAKIKEKYPRAIFVYCASHKLNLVVNDLKAVPDIRNAIGSGKAIIKFFRESPKRRSLIPNVPLLCETRWTAKYK 360
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000043220.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:7:36411169:36451375:1 gene:ENSXETG00000018966.1 transcript:ENSXETT00000043220.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 72.0182 bits (175), Expect = 3.932e-12
Identity = 49/151 (32.45%), Postives = 79/151 (52.32%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTE-ANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVVDICSKNVM-ARNFFGIVQKLICFIECSTKR 1472
            I  + +  K++ I + +  D+S  +QL+F++ YV    D I     I+ +    + A+ L   +    K+Y   I + RGQ YD  S M   YSGL A +K+V+  A Y+ C +H LNLV    +++   A +FF I+Q+L  F   S+ R
Sbjct:  238 IINEAKQAKYYSISVDSTPDVSHTDQLAFIICYVKN--DGIPKERFIKFIPNVGHKAENLFSAVMDTLKEYHIDILDCRGQSYDNASNMSGPYSGLQARIKQVNPLAVYIPCSAHSLNLVGTSAAESCREAVSFFCILQQLYHFFSASSTR 386
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Mouse
Match: Zmym1 (zinc finger, MYM domain containing 1 [Source:MGI Symbol;Acc:MGI:1915560])

HSP 1 Score: 45.0542 bits (105), Expect = 3.600e-8
Identity = 34/127 (26.77%), Postives = 60/127 (47.24%), Query Frame = 2 
Query:  539 VFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
             FC+ C +  Q K+      F T+G  +W + L     F KH +SD H+K+++ W  +     I    +    +Q+E     ++  + I+  I  L +  L  + N++S    N+G FL++  L AR
Sbjct:  317 AFCYSCYLFFQKKFSCRREAFATQGTADWEKML---GNFRKHEESDVHLKSLQFWRQYQFLDAIPCDNSSVYSKQIE---GNKKYLRLIIENILFLGKQCLLLKGNDQSVSPMNKGSFLELLELRAR 437

HSP 2 Score: 33.8834 bits (76), Expect = 3.600e-8
Identity = 33/129 (25.58%), Postives = 49/129 (37.98%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVN------LSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I        + + QLS  VRY        L  +     +  E VT  ++   +   L  +   ++     I GQ YD  +      + + A  K+    A YVHC +H L L V
Sbjct:  471 LQDIVSEINASSAFSIICEEIAGSAAERQLSVCVRYPQKTPSAVLVKERFLGFVTAEEVTGVHVHGRIKAYLQQVGVDFN----KICGQAYDSATNFTVKLNEVVAEFKKEEPRALYVHCHAHFLELAV 595
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Mouse
Match: Zmym1 (zinc finger, MYM domain containing 1 [Source:MGI Symbol;Acc:MGI:1915560])

HSP 1 Score: 45.0542 bits (105), Expect = 3.600e-8
Identity = 34/127 (26.77%), Postives = 60/127 (47.24%), Query Frame = 2 
Query:  539 VFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
             FC+ C +  Q K+      F T+G  +W + L     F KH +SD H+K+++ W  +     I    +    +Q+E     ++  + I+  I  L +  L  + N++S    N+G FL++  L AR
Sbjct:  317 AFCYSCYLFFQKKFSCRREAFATQGTADWEKML---GNFRKHEESDVHLKSLQFWRQYQFLDAIPCDNSSVYSKQIE---GNKKYLRLIIENILFLGKQCLLLKGNDQSVSPMNKGSFLELLELRAR 437

HSP 2 Score: 33.8834 bits (76), Expect = 3.600e-8
Identity = 33/129 (25.58%), Postives = 49/129 (37.98%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVN------LSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I        + + QLS  VRY        L  +     +  E VT  ++   +   L  +   ++     I GQ YD  +      + + A  K+    A YVHC +H L L V
Sbjct:  471 LQDIVSEINASSAFSIICEEIAGSAAERQLSVCVRYPQKTPSAVLVKERFLGFVTAEEVTGVHVHGRIKAYLQQVGVDFN----KICGQAYDSATNFTVKLNEVVAEFKKEEPRALYVHCHAHFLELAV 595
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Mouse
Match: Zmym1 (zinc finger, MYM domain containing 1 [Source:MGI Symbol;Acc:MGI:1915560])

HSP 1 Score: 39.6614 bits (91), Expect = 1.260e-6
Identity = 29/107 (27.10%), Postives = 52/107 (48.60%), Query Frame = 2 
Query:  590 FQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            F T+G  +W + L     F KH +SD H+K+++ W  +     I    +    +Q+E     ++  + I+  I  L +  L  + N++S    N+G FL++  L AR
Sbjct:  239 FATQGTADWEKML---GNFRKHEESDVHLKSLQFWRQYQFLDAIPCDNSSVYSKQIE---GNKKYLRLIIENILFLGKQCLLLKGNDQSVSPMNKGSFLELLELRAR 339

HSP 2 Score: 33.8834 bits (76), Expect = 1.260e-6
Identity = 33/129 (25.58%), Postives = 49/129 (37.98%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVN------LSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I        + + QLS  VRY        L  +     +  E VT  ++   +   L  +   ++     I GQ YD  +      + + A  K+    A YVHC +H L L V
Sbjct:  373 LQDIVSEINASSAFSIICEEIAGSAAERQLSVCVRYPQKTPSAVLVKERFLGFVTAEEVTGVHVHGRIKAYLQQVGVDFN----KICGQAYDSATNFTVKLNEVVAEFKKEEPRALYVHCHAHFLELAV 497
[Close]
BLAST of TTF-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5SVZ6|ZMYM1_HUMAN (Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.481e-12
Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFV-----KERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDT---TFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDT----LARPNLRFRVNEKSTDSSNRGLFLDINNLIAR 910
            K  ++  +P  T  V     K RS +     D   LE + +KD  FC+ C +  Q  +     +F T G  NW + L+K   F KH KS+ H+K+++ W  +      D  ++      L I  K+ +  ++ L LI      L +  L  R N++S  S N+G FL++  + A+
Sbjct:  432 KISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLE-NSKKDVAFCYSCQLFCQKYFSCGRESFATHGTSNWKKTLEK---FRKHEKSEMHLKSLEFWREYQ---FCDGAVS----DDLSIHSKQIEGNKKYLKLIIENILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK 595

HSP 2 Score: 42.743 bits (99), Expect = 1.481e-12
Identity = 34/129 (26.36%), Postives = 56/129 (43.41%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIE------ALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV 1385
            L DI  +I     F I      + + + QLS  VRY   S   I         +D E +T  ++ + +   L  I    D     I GQ YD  + ++  ++ + A  K+    A Y+HC++H L+L +
Sbjct:  630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMD----KIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSI 754
[Close]
BLAST of TTF-type domain-containing protein vs. TrEMBL
Match: A0A2S2PK68 (Zinc finger MYM-type protein 1 OS=Schizaphis graminum OX=13262 GN=ZMYM1_118 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-35
Identity = 62/202 (30.69%), Postives = 100/202 (49.50%), Query Frame = 2 
Query:  416 FRKGP--EKFAYPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIG------QVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLA---LEC-KRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSP 985
             +KGP      +P     V  RSF   WYKD  WLEY    D+ FCF C          +   D  F + G+R W+ A +K   F  H  S  HI +++  S + + + ID QL    +EC  +Q E     R   ++++ +I T+A+     R + +++ S  +GLFL+I  LI+R++P +  HL+ + + +    +Y SP
Sbjct:   78 IKKGPFQPVITFPRRQIGVSNRSFHALWYKDFNWLEYSSALDAAFCFACRCFSMDITSHRGHSDPAFISTGFRGWNMATKK---FKLHQMSAIHISSVQTLSAYLKDIPIDVQLEKKRIECLSKQEEKRINNRIIMKKLIDIIITIAKGGRALRGHNENSKSLEKGLFLEIVELISRYDPVMKDHLENAPKNS----TYISP 272

HSP 2 Score: 72.7886 bits (177), Expect = 1.192e-35
Identity = 49/145 (33.79%), Postives = 78/145 (53.79%), Query Frame = 3 
Query: 1083 DLSKQNQLSFVVRYVN----LSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLV-VDICS---KNVMARNFFGIVQKLICFIECSTKRHGVFQDI 1493
            DL    QLS V+RY +    + ++    L  +E V   +I   L ++LSS+  +++    +I    +DG +TM     G+    KE++ +  YVHC++H LNLV VD C+   +N +   FFG+VQ    FIE S  RH + ++I
Sbjct:  308 DLGHNEQLSLVIRYFDEETYMPVERFIGLHRVEKVDSQSIFDELSKMLSSLTIEWN----DITSVCFDGAATMSGSIGGVQKKFKEMNSSIMYVHCYAHCLNLVLVDACTSSKENRIVFEFFGVVQLTYTFIEGSAVRHAILENI 448

HSP 3 Score: 33.113 bits (74), Expect = 1.192e-35
Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 1 
Query: 1519 RTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQIT 1626
            RT+KSLS+TRW  R    S I +  L ++  LE IT
Sbjct:  457 RTMKSLSTTRWACRAEAVSAIKHNYLALIKALENIT 492
[Close]
BLAST of TTF-type domain-containing protein vs. TrEMBL
Match: A0A444UHZ3 (Zinc finger MYM-type protein 1 OS=Acipenser ruthenus OX=7906 GN=EOD39_4508 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.489e-34
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNL-VVDICSKNVMARNFFGIVQKLICFIECSTKRHGVFQDIIDPKS 1508
            I  +++  + F I      DLS+  Q++ +VRYVN S +  E  +      + + A  L  ++ S        I+ +RGQ YDG + MR  Y G+   +   +  AYYVHC++H LNL VVD+ S   + RN FGI+Q L  FIE S+KRH VF+ I   K+
Sbjct:  280 IVNEVKKAEVFSIIADETMDLSRHEQVALIVRYVNQSFEIQERFIGFYRTLQTDGA-SLATLIKSTLSALGLDISALRGQCYDGAANMRGPYKGVATRILSENPLAYYVHCYAHILNLCVVDMVSCIPVVRNAFGILQALRNFIEVSSKRHAVFEKITSQKT 440

HSP 2 Score: 65.855 bits (159), Expect = 2.489e-34
Identity = 50/185 (27.03%), Postives = 85/185 (45.95%), Query Frame = 2 
Query:  413 YFRKGPEK--FAYPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQ-VKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGR-----TVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDI-------NNLIARWNPN 922
            Y  +GP +    +P +   +K R F+  WY +  WLEY    D  FCF C   G     D  F+  G++ W +A ++   F +HSK + H++ +  W   GR     T  + +QL  + K+++      R   + ++      AR  +  R +E+  DS+N+G   ++       N LI R+  N
Sbjct:   76 YVEEGPYQPVIDFPASACGIKTRKFRQVWYNEYKWLEYSVRDDRAFCFCCRAFGNGPNSDLAFRVTGFKTWKKANER---FREHSKCEAHLEAVAKWK--GRLQSCKTGSVASQLDSQKKKRV---ADNRAYLETVIESTLFCARQGIPLRGHEEGMDSTNQGNLRELMKLRSTDNELIQRFMVN 252

HSP 3 Score: 31.187 bits (69), Expect = 2.489e-34
Identity = 16/43 (37.21%), Postives = 22/43 (51.16%), Query Frame = 1 
Query: 1510 SGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSS 1638
            +G  T+KSLS TRWN RV     +L     ++  L +I    S
Sbjct:  443 AGPATLKSLSDTRWNCRVEAIRAVLENFDEMVQALNEIAHGGS 485
[Close]
BLAST of TTF-type domain-containing protein vs. TrEMBL
Match: A0A1X7SXE6 (TTF-type domain-containing protein OS=Amphimedon queenslandica OX=400682 GN=100637611 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.815e-33
Identity = 59/194 (30.41%), Postives = 96/194 (49.48%), Query Frame = 2 
Query:  428 PEKFAYPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQV--KYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLA--LECKRQLEIGCKERQQRQEILSLIDTL---ARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSPS 988
            P  + +P T    K RSF  +WY+   W+EY   KD+VFC+ C +      K +  F T G+R+W  A  K   F KH  S  H + +  W+ F  TV   + +A  L+  R+ +I    ++ R  ++++I +L   A   +  R + ++   SN+G FL++  L+A ++P +   L    Q A     YTS S
Sbjct:   80 PINYPFPFTMISNKARSFNAKWYQQYEWIEYSIAKDAVFCYPCRLFCHASNKAEDRFVTLGFRDWKHASGKGGAFAKHDTSKSHQEALMNWNQFKVTVATGSSIATRLDSARKEQI----KKNRHYLIAIIHSLMYCASQEIALRGHRETPSVSNQGNFLELVKLLAMYDPIINDRLTSGPQNAL----YTSHS 265

HSP 2 Score: 85.5001 bits (210), Expect = 1.815e-33
Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLV-VDICSKNVMARNFFGIVQKLICFIECSTKRHGVFQDI 1493
            I  +++    F I     +D SKQ Q+ FVVRYV+++   I          +A  A  L   +  +  K+D   + I  QGYDG S M    +G+ A V+E +  A Y+HC++H LNLV VD C     A  FF +++ L  F+  S+K H VF ++
Sbjct:  282 ICHQVQSAGVFSILADETKDFSKQEQMCFVVRYVDMAQGEIHEHFLTYVEAKALDATSLSTYIKDLLLKFDLDCSKIVSQGYDGASVMSGRCAGVQAKVREFAPNAVYIHCYAHILNLVLVDSCRSVSSASEFFALLEALYVFM-ASSKAHTVFIEV 437
[Close]
BLAST of TTF-type domain-containing protein vs. TrEMBL
Match: A0A0G2L848 (TTF-type domain-containing protein OS=Danio rerio OX=7955 PE=4 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.179e-32
Identity = 57/154 (37.01%), Postives = 84/154 (54.55%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLV-VDICSKNVMARNFFGIVQKLICFIECSTKRHGVF 1484
            I  +I+  + F I L    D+S + Q+SFVVRYV   ++  E  L +    E+   K L  ++ S+ +     + NIRGQGYDG + M   Y GL + ++  ++ A YVHC +H LNLV V+    ++    FF +V+KL  F   STKRH  F
Sbjct:  395 IQNEIKEAQIFSILLDETTDVSHKEQVSFVVRYVR-DMEVKERFLQV-CTLESTTGKELENVVISLLQDNGLDLKNIRGQGYDGAANMSGMYKGLQSRIRAHNEKALYVHCQAHCLNLVLVESAKSSIHFVTFFSLVEKLYVFCTGSTKRHTAF 546

HSP 2 Score: 79.337 bits (194), Expect = 3.179e-32
Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 2 
Query:  473 RSFQVQWYKDRPWLEYHDEKDSVFCFDC*VI---GQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECK--RQLEIGCKERQQRQEILS-LIDT---LARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQK 955
            RSFQ  WY DRPWLEY  + D+++CF C +     + K  T ++T G   W  A  K K   +H+ ++ H+ +M  W+ + +  L   Q A +    +   I  +ERQ+ +EIL+ LID    LAR    FR +++S+ S+N+G F+++   +A+++  +  HL    +K
Sbjct:  200 RSFQRSWYTDRPWLEYSPKNDAIYCFSCRIFLREEKFKNKTAWKTLGINTWRSATGKMK---EHASTEAHMMSMVRWNIYSKKAL---QTAFDTSDIQGKAIRERERQRNREILTRLIDISLYLARQGQAFRGDDESSSSANQGNFIELVKTLAQYDSVMKLHLDAIQEK 363
[Close]
BLAST of TTF-type domain-containing protein vs. TrEMBL
Match: J9M422 (TTF-type domain-containing protein OS=Acyrthosiphon pisum OX=7029 PE=4 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.246e-32
Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNL-VVDICSKNVMARNFFGIVQKLICFIECSTKRHGVFQDI 1493
            I + I+   F+ I +   QDLS   Q+S  +RYV+      E  L   + T       L  ++ ++       + N+RGQ YDG ++MR  YSG+ + +KE + +A YVHC++H LNL +VD+     M RN FG +  L  FI+ S+KR+ +F+ +
Sbjct:  222 IIKDIQSNGFYSILVDETQDLSYHEQVSIYIRYVDQHFVPHEVFLGF-YKTNTTDGLALTNLIKNVLNSCGIDLNNVRGQCYDGAASMRGSYSGVQSRIKEENPSALYVHCYAHILNLCLVDLAKSVPMVRNTFGTLSTLHNFIKTSSKRYAIFKKV 377

HSP 2 Score: 65.0846 bits (157), Expect = 3.246e-32
Identity = 44/157 (28.03%), Postives = 78/157 (49.68%), Query Frame = 2 
Query:  464 VKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFG---RTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTL---ARPNLRFRVNEKSTDSSNRGLFLDINNLIARWN 916
            +  RSF+ +WY   PW+E+ +   + FCF+C V      + TF   G++NW + ++K   F +H K + H ++    S++    +   + ++L L  K  +       Q R+ I  L+ TL   AR  +  R + ++  S+N G FL++  L A  N
Sbjct:   38 INGRSFRTEWYSQFPWIEFSEHLQAAFCFNCRVFPSKNAEKTFTNVGFKNWKKGIEK---FTQHQKCNAHKESTCKLSSYTFSKKNGSVISELNLAHKNSV------TQNREYIRCLLKTLLFCARQGIAMRGHNETEMSTNCGNFLELLKLRAHDN 185

HSP 3 Score: 31.187 bits (69), Expect = 3.246e-32
Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 1 
Query: 1519 RTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITT 1629
            +T+KSLS TRWN R+     +L     I  TL +I +
Sbjct:  408 KTLKSLSDTRWNCRIEAIKSVLENLETIFQTLLEIES 444
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000056429.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000470.1:7274:9337:1 gene:ENSAMXG00000039382.1 transcript:ENSAMXT00000056429.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 99.3673 bits (246), Expect = 1.085e-31
Identity = 66/201 (32.84%), Postives = 102/201 (50.75%), Query Frame = 2 
Query:  443 YPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKY-DTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLA-LECKRQLEIGCKERQQRQEILSLIDT---LARPNLRFRVNEKSTD---SSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSPSA*H*MIQTVTS 1021
            YP   F  K R+F   WY +R WLEY    D+ FC+ C   G  +  D+TF  +GYR+W  A +++KGF KHS S  HI  M +W   GR +  +++++ L    QL      R+ R  + +LID    LA   L  R N  + D       GLFL + +   + +  LA  ++ + + A    +YTSP   + +I T+++
Sbjct:   86 YPVRLFQGKNRAFVASWYHNREWLEYSVHADAAFCYPCRKFGGARATDSTFTHKGYRDWKHATEREKGFHKHSTSKEHISCMTLWLEHGRRIKNNSEISTLLNAEQL------RKNRYYVSALIDVVGFLAENQLPLRGNADAFDDMAEGGSGLFLSLLDYTIKKDSELAEIVKTTPRNA----TYTSPDIQNELISTLSN 276

HSP 2 Score: 49.2914 bits (116), Expect = 1.085e-31
Identity = 35/112 (31.25%), Postives = 60/112 (53.57%), Query Frame = 3 
Query: 1053 FFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKE-VSQTAYYVHCFSHRLNLVV 1385
            ++ I +   +D +    +S V+R+V+   +  E LL +  V+ A  AK L + + +   K   S + I  Q YDG S M   + G+  L++E + +   YVHC +H+L+LVV
Sbjct:  290 WYTIKVDGTRDPTGCENISVVLRFVSELYEATERLLTVATVS-AGDAKTLTDTIITELTKAGLSTSKILSQVYDGASLMSGKHGGVQKLLQEKLGREIPYVHCLNHQLHLVV 400

HSP 3 Score: 29.6462 bits (65), Expect = 1.085e-31
Identity = 16/54 (29.63%), Postives = 24/54 (44.44%), Query Frame = 1 
Query: 1480 YFRTLSIRNQSGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSSY 1641
            +FR  S+  Q     +K L   RW       S I+ +   I S L +I +D +Y
Sbjct:  423 FFRKPSVAAQYKGERLKRLLDQRWTGHFATVSAIIASYQDITSFLSEIESDRAY 476
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000042613.1 (pep primary_assembly:Astyanax_mexicanus-2.0:15:33033943:33037804:1 gene:ENSAMXG00000040043.1 transcript:ENSAMXT00000042613.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 97.8265 bits (242), Expect = 2.550e-31
Identity = 66/201 (32.84%), Postives = 101/201 (50.25%), Query Frame = 2 
Query:  443 YPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKY-DTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLA-LECKRQLEIGCKERQQRQEILSLIDT---LARPNLRFRVNEKSTD---SSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSPSA*H*MIQTVTS 1021
            YP   F  K R+F   WY +R WLEY    D+ FC+ C   G  +  D+TF  +GYR+W  A +++KGF KHS S  HI  M +W   GR +  +++++ L    QL      R+ R  + +LID    LA   L  R N  + D       GLFL + +   + +  LA  ++   + A    +YTSP   + +I T+++
Sbjct:   86 YPVRLFQGKNRAFVASWYHNREWLEYSVHADAAFCYPCRKFGGARATDSTFTHKGYRDWKHATEREKGFHKHSTSKEHISCMTLWLEHGRRIKNNSEISTLLNAEQL------RKNRYYVSALIDVVGFLAENQLPLRGNADAFDDMAEGGSGLFLSLLDYTIKKDSELAEIVKTIPRNA----TYTSPDIQNELISTLSN 276

HSP 2 Score: 49.2914 bits (116), Expect = 2.550e-31
Identity = 35/112 (31.25%), Postives = 60/112 (53.57%), Query Frame = 3 
Query: 1053 FFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKE-VSQTAYYVHCFSHRLNLVV 1385
            ++ I +   +D +    +S V+R+V+   +  E LL +  V+ A  AK L + + +   K   S + I  Q YDG S M   + G+  L++E + +   YVHC +H+L+LVV
Sbjct:  290 WYTIKVDGTRDPTGCENISVVLRFVSELYEATERLLTVATVS-AGDAKTLTDTIITELTKAGLSTSKILSQVYDGASLMSGKHGGVQKLLQEKLGREIPYVHCLNHQLHLVV 400

HSP 3 Score: 29.6462 bits (65), Expect = 2.550e-31
Identity = 16/54 (29.63%), Postives = 24/54 (44.44%), Query Frame = 1 
Query: 1480 YFRTLSIRNQSGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSSY 1641
            +FR  S+  Q     +K L   RW       S I+ +   I S L +I +D +Y
Sbjct:  423 FFRKPSVAAQYKGERLKRLLDQRWTGHFATVSAIIASYQDITSFLSEIESDRAY 476
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000025204.2 (pep primary_assembly:Astyanax_mexicanus-2.0:12:7364240:7371214:-1 gene:ENSAMXG00000024490.2 transcript:ENSAMXT00000025204.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 77.7962 bits (190), Expect = 4.002e-26
Identity = 49/160 (30.63%), Postives = 85/160 (53.12%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLS-----LDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            + E+I   + + + +    D+S + QLS V+R VN        ++    +D+E  +     KGL E+L    +K++ SI++ RGQ YD  S M     G+ A + +++  A  + C SH+LNLVV D    +V++ +FFG++Q+L      S +R  V +
Sbjct:  243 VLEEIITQRDYSVIMDCTPDISHKEQLSVVLRLVNCDPSVSIAEHFFGFIDVEDTS----GKGLTEVLLDHLQKHNLSISDCRGQSYDNGSNMMGQKQGVRARILQLNNKALCIPCSSHKLNLVVADAAKSSVLSTSFFGVLQRLYNLFSSSVQRWAVLR 398

HSP 2 Score: 51.6026 bits (122), Expect = 4.002e-26
Identity = 42/155 (27.10%), Postives = 68/155 (43.87%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKE-RQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHL-QRSSQKAK 961
            R WL Y    DSVFCF C V+G  K D      G+  W       K   +H  S  H  NM+ W    R +     +    +  ++I  +  +   + ++++I  LA  N   R         + G FL    L+A+++P +  H+ +R +Q+AK
Sbjct:   74 RSWLVYSMSTDSVFCFPCTVLG--KRDNALSNCGFHKWKNLTYHLK---EHEYSKGHCDNMRNWHELQRRLQNKTTIDQRQQTLMQIEIEHWKAVIRRVIAIICHLAERNQALRGTTSVLYDPHNGNFLAQVELMAKFDPVMNEHIRRRQNQEAK 223

HSP 3 Score: 30.0314 bits (66), Expect = 4.002e-26
Identity = 16/56 (28.57%), Postives = 30/56 (53.57%), Query Frame = 1 
Query: 1498 IRNQSGCRTIKSLSSTRWNSRVNNCSVI-LNTPLIIMSTLEQITTDSSYKCKTGDA 1662
            +R      T+K LS+TRW +R+++  V+    P I    LE ++   ++  + GD+
Sbjct:  397 LRKHVKQLTLKPLSATRWEARIDSVKVVRYQLPEI----LEALSALQTFGIEKGDS 448
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000042715.1 (pep primary_assembly:Astyanax_mexicanus-2.0:16:11855083:11857132:-1 gene:ENSAMXG00000035113.1 transcript:ENSAMXT00000042715.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 76.6406 bits (187), Expect = 1.194e-25
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLV-VDICSKNVMARNFFGIVQKLICFIECSTKRHG 1478
            I  +I+  K+F + + +  DL+  +QL+F+ R+VN     +E  L  E + E +    L E + ++ +     ++N RGQ YD  S M   Y+G+ A +K+ +    YV C +H LNLV V+    +  A  FF  VQ +  F   ST R G
Sbjct:  209 IVNEIKESKYFSVIVDSTPDLAHVDQLTFIFRFVNNDGHVVERFLAFEPI-ENHSGDSLAECVVAMVENLGLDLSNCRGQSYDNASNMSGKYNGIQAHLKQRNPLICYVPCAAHSLNLVGVNAVDSSPEAGRFFDFVQAMYTFCASSTHRWG 359

HSP 2 Score: 61.2326 bits (147), Expect = 1.194e-25
Identity = 52/168 (30.95%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGR-TVLIDAQLALECKRQLEIGCKERQQRQEIL----SLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSPSA 991
            R WL Y      V+CF C +    K++T     G+ +W  +    +   +H  S  H   M    N  R T  ID+ +     +Q++    ERQ  +E+L    ++I  L    L FR +++   S++ G FL I  L+A+++P LA HLQR   K KG  SY S + 
Sbjct:   40 RQWLLYSPSTGCVYCFACKLFSS-KHNTF--VHGFSDWKHS----ERIGEHEGSVEHRACMLALYNRSRGTATIDSDIV----KQID---AERQYWREVLKRVVAVIQFLGERGLAFRGDDELLGSAHNGNFLGIIELLAKFDPFLAEHLQRFGGKGKGSVSYLSSTV 193
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000044961.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000032.1:419978:423709:1 gene:ENSAMXG00000036481.1 transcript:ENSAMXT00000044961.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 82.4185 bits (202), Expect = 3.699e-25
Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLS-----LDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            L +I  + +  K++ + +    D+S + QLS V+R VN        ++    +D+E  +     KGL E+L    +K++ SI++ RGQ YD  S M     G+ A + +++  A  + C SH LNLVV D    +V++ +FFG++Q+L      S +R  V +
Sbjct:  294 LEEIVRRAQRAKYYSVIMDCTPDISHKEQLSVVLRLVNCDPSVSIAEHFFGFIDVEDTS----GKGLTEVLLDHLQKHNLSISDCRGQSYDNGSNMMGQKQGVQARILQLNNKALCIPCSSHTLNLVVADAAKSSVLSTSFFGVLQRLYNLFSSSVQRWAVLR 452

HSP 2 Score: 48.521 bits (114), Expect = 3.699e-25
Identity = 48/159 (30.19%), Postives = 69/159 (43.40%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGR-----TVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQR-SSQKAK 961
            R WL Y    DSVFCF C V G  K D       +  W       K   +H  S  H  NM+ W    R     T +   Q AL    Q+EI   +   R+ ++++I  LA  N   R         + G FL    L+A+++P +  H++R  +Q+AK
Sbjct:  124 RSWLVYSMSTDSVFCFPCTVFG--KRDNALSKLWFHKWKNLTYHLK---EHEYSKGHCDNMRNWHELQRRLQNKTTIDQRQQAL---MQIEIEHWKAVIRR-VIAIICHLAERNQALRGTTSELYDPHNGNFLAQVELMAKFDPVMNEHIRRIQNQEAK 273

HSP 3 Score: 25.409 bits (54), Expect = 3.699e-25
Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 1 
Query: 1498 IRNQSGCRTIKSLSSTRWNSRVNNCS 1575
            +R      T+K LS+TRW +R+++  
Sbjct:  451 LRKHVKQLTLKPLSATRWEARIDSVE 476
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000027735.1 (pep primary_assembly:ASM223467v1:9:30712608:30715295:1 gene:ENSORLG00000030268.1 transcript:ENSORLT00000027735.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 75.0998 bits (183), Expect = 3.181e-27
Identity = 52/171 (30.41%), Postives = 78/171 (45.61%), Query Frame = 2 
Query:  422 KGPEKFAYPNTTFFVKERSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQT--EGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTL---ARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNP 919
            K P    +P T    + R F   WY    WLEY   KDS FC+ C   G      +  T  EG++NW +A  K  G   H++S+ H   M  W+ + ++    A L+     +     KE   R+ I  + +TL   A  N+  R   K ++  ++G FL I  L+A+ NP
Sbjct:  101 KQPHLKCFPRTYQGDRRRCFSKDWYNAHKWLEYSQSKDSAFCYACRHFGLPASGESVLTSEEGFKNWKKATFKDGGLLGHARSEAHTTAMLAWAEYEKSTSGTASLSASLDAEYSKLVKE--NREYIKVVGETLLLTATQNIAQR-GHKESEVDSKGNFLAIMELLAKNNP 268

HSP 2 Score: 68.1662 bits (165), Expect = 3.181e-27
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYV-NLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITN-IRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVVDICSKNVMARN-FFGIVQKLICFIECS 1463
            I  ++   + F I +   +D+SK+ Q+SFV+RY  N S+   E  L  E     N A  L + +  I +K+     N + GQ YDG S M    +G+ A +K  +  A+YVHC +H LNLV+    K +   N FF ++QKL  F+  S
Sbjct:  303 ITGEVAESEAFSILVDETKDMSKKEQMSFVIRYYYNGSV--CECFLAFEAAQRLNAA-ALSQKIIEILQKHGLDYKNHLVGQAYDGASVMSGKNTGVQARIKSEAPLAFYVHCNAHCLNLVLVDSVKFIPEANCFFSLLQKLYVFVSGS 448
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000028133.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948955])

HSP 1 Score: 71.2478 bits (173), Expect = 3.386e-24
Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLS-----LDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            L  I + I+  K+F I L    D+S   QLS ++R V+L       ++    L+ E  T  ++A  +L  L  +   ++    + RGQ YD  + M+    G+ A + E +  A ++ C +H LNLVV D   ++V A ++FG++QKL      S +R  + +
Sbjct:  352 LSAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLMEKPQIREHFMGFLEAEESTGQHLASMILNRLEELGISFE----DCRGQSYDNGANMKGKNKGVQARLLEKNPRALFLPCGAHTLNLVVCDAAKRSVDAMSYFGVLQKLYTLFSASAQRWAILK 510

HSP 2 Score: 60.4622 bits (145), Expect = 3.386e-24
Identity = 47/164 (28.66%), Postives = 73/164 (44.51%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNF------GRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSY 976
            R WL Y   K+S+FCF C +      + T  T G  NW  A         H KS  H+  MK W         G+T+       LE +R      + R     +++++ +LA  NL  R + ++  +S+ G FL    L+AR++P +  HL R  +    + SY
Sbjct:  181 RTWLMYSKVKNSLFCFCCKLFSNKNINLT--TSGTANWKHA---STYLTAHEKSPEHLNCMKAWKELSGRIRSGKTIDKQEMALLEEER-----VRWRAVLTRLIAIVQSLAVRNLALRGHTETLFTSSNGNFLKEVELMARFDPIMKDHLNRVLRGTASHNSY 334

HSP 3 Score: 21.1718 bits (43), Expect = 3.386e-24
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1 
Query: 1522 TIKSLSSTRWNSRVNN 1569
            T+KS + TRW S++ +
Sbjct:  516 TLKSWTETRWESKIKS 531
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000042294.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:110016639])

HSP 1 Score: 71.2478 bits (173), Expect = 3.386e-24
Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLS-----LDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            L  I + I+  K+F I L    D+S   QLS ++R V+L       ++    L+ E  T  ++A  +L  L  +   ++    + RGQ YD  + M+    G+ A + E +  A ++ C +H LNLVV D   ++V A ++FG++QKL      S +R  + +
Sbjct:  352 LSAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLMEKPQIREHFMGFLEAEESTGQHLASMILNRLEELGISFE----DCRGQSYDNGANMKGKNKGVQARLLEKNPRALFLPCGAHTLNLVVCDAAKRSVDAMSYFGVLQKLYTLFSASAQRWAILK 510

HSP 2 Score: 60.4622 bits (145), Expect = 3.386e-24
Identity = 47/164 (28.66%), Postives = 73/164 (44.51%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNF------GRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSY 976
            R WL Y   K+S+FCF C +      + T  T G  NW  A         H KS  H+  MK W         G+T+       LE +R      + R     +++++ +LA  NL  R + ++  +S+ G FL    L+AR++P +  HL R  +    + SY
Sbjct:  181 RTWLMYSKVKNSLFCFCCKLFSNKNINLT--TSGTANWKHA---STYLTAHEKSPEHLNCMKAWKELSGRIRSGKTIDKQEMALLEEER-----VRWRAVLTRLIAIVQSLAVRNLALRGHTETLFTSSNGNFLKEVELMARFDPIMKDHLNRVLRGTASHNSY 334

HSP 3 Score: 21.1718 bits (43), Expect = 3.386e-24
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1 
Query: 1522 TIKSLSSTRWNSRVNN 1569
            T+KS + TRW S++ +
Sbjct:  516 TLKSWTETRWESKIKS 531
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000045044.1 (zinc finger MYM-type protein 1-like [Source:NCBI gene;Acc:111948193])

HSP 1 Score: 71.2478 bits (173), Expect = 3.386e-24
Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 3 
Query: 1017 LPDIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLS-----LDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            L  I + I+  K+F I L    D+S   QLS ++R V+L       ++    L+ E  T  ++A  +L  L  +   ++    + RGQ YD  + M+    G+ A + E +  A ++ C +H LNLVV D   ++V A ++FG++QKL      S +R  + +
Sbjct:  352 LSAIVDDIKKAKYFSIILDCTLDISHTEQLSVIIRVVSLMEKPQIREHFMGFLEAEESTGQHLASMILNRLEELGISFE----DCRGQSYDNGANMKGKNKGVQARLLEKNPRALFLPCGAHTLNLVVCDAAKRSVDAMSYFGVLQKLYTLFSASAQRWAILK 510

HSP 2 Score: 60.4622 bits (145), Expect = 3.386e-24
Identity = 47/164 (28.66%), Postives = 73/164 (44.51%), Query Frame = 2 
Query:  503 RPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNF------GRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSY 976
            R WL Y   K+S+FCF C +      + T  T G  NW  A         H KS  H+  MK W         G+T+       LE +R      + R     +++++ +LA  NL  R + ++  +S+ G FL    L+AR++P +  HL R  +    + SY
Sbjct:  181 RTWLMYSKVKNSLFCFCCKLFSNKNINLT--TSGTANWKHA---STYLTAHEKSPEHLNCMKAWKELSGRIRSGKTIDKQEMALLEEER-----VRWRAVLTRLIAIVQSLAVRNLALRGHTETLFTSSNGNFLKEVELMARFDPIMKDHLNRVLRGTASHNSY 334

HSP 3 Score: 21.1718 bits (43), Expect = 3.386e-24
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1 
Query: 1522 TIKSLSSTRWNSRVNN 1569
            T+KS + TRW S++ +
Sbjct:  516 TLKSWTETRWESKIKS 531
[Close]
BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000041223.1 (zinc finger MYM-type protein 1 [Source:NCBI gene;Acc:101155882])

HSP 1 Score: 59.6918 bits (143), Expect = 4.137e-17
Identity = 45/159 (28.30%), Postives = 83/159 (52.20%), Query Frame = 2 
Query:  473 RSFQVQWYKDRPWLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILS-LIDT---LARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHL 937
            R FQV  Y+  PWL   +    ++C++C +    ++     T G+ N +   +  K   KH  +  H++++ +   FG +  ++ QL    +R+ E+  ++ ++ +EIL  LID    L +  L FR  ++S  SSNRG + ++ ++IA  N +L  HL
Sbjct:   52 RHFQVTNYERYPWLTGSEVHCKLYCWECLLFALDRHGVWSHT-GFGNLTCLTKAAK---KHQNTAGHLQSIVLSKTFGES-RVELQLNEHARRETELHNEKVKKNREILKRLIDCVLFLGKQELSFRGRDESGGSSNRGNYCELLSVIAESNTDLHYHL 205

HSP 2 Score: 49.2914 bits (116), Expect = 4.137e-17
Identity = 40/177 (22.60%), Postives = 78/177 (44.07%), Query Frame = 3 
Query: 1023 DIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVVDI-CSKNVMARNFFGIVQKLICFIECSTKRHGVFQDIIDPK------SVWMSNYKI 1532
            +I  +++   F  + +    D S   QL+  +RYV  S    E  +  E VT    A  +  ++     + +  +  +  Q ++G +      +G+ A VKE +  A ++HC++H+L+LV+    SK    + FF  +  L+ F   S  R  +  +I   +      + W S  ++
Sbjct:  233 EIRREVKNAPFVSVMVEETTDASNAAQLALALRYVTRS-GVKERFVRFEDVTSGKRADDIAGLVIKFLLENE-CLDKVVAQCFEGATVTSSGLNGVQAKVKESAPLALFIHCYAHQLSLVLSQGASKLKECKIFFAHLNGLVAFFSRSPWRTQLLDEICQRRLPGVTPTPWQSTSRV 407
[Close]
BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Match: SMESG000052596.1 (SMESG000052596.1)

HSP 1 Score: 128.257 bits (321), Expect = 2.104e-41
Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 2 
Query:  752 QLEIGCKERQQRQEILSLI----DTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTSPSA*H*MIQTVTS 1021
            +LEIGCKER Q QEIL LI    +TLAR NL FR +++STDSSNRGLFL+I NLIARWNP+LAAHLQRSSQ A GYP YT+PS+ +  IQTV S
Sbjct:    6 RLEIGCKERYQSQEILPLIVDIINTLARLNLSFRGHKESTDSSNRGLFLEITNLIARWNPDLAAHLQRSSQNALGYPRYTTPSSQNKKIQTVAS 99

HSP 2 Score: 62.003 bits (149), Expect = 2.104e-41
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 3 
Query: 1023 DIAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEH 1172
            DIAEK +M KFF I L    DLSKQ QLSFVVR+ N S D IEALL++E 
Sbjct:  104 DIAEKAKMAKFFAICLDNTSDLSKQGQLSFVVRFFNQSGDVIEALLNMEQ 153
[Close]
BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Match: SMESG000061124.1 (SMESG000061124.1)

HSP 1 Score: 51.9878 bits (123), Expect = 2.917e-16
Identity = 49/190 (25.79%), Postives = 80/190 (42.11%), Query Frame = 2 
Query:  416 FRKGPEK---FAYPNTTFFVKERSF-QVQWYKDRP--------WLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKER--QQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQR 943
              KGP +     YP   F    RSF +V +Y+  P        WL Y  + D+ FCF C + G  K +     EG+ +W           +H K+  HI+N   W      +     +    +R  +   K+R  Q  + ++S++  LA   L FR +       N G FL    +I +++  +A H++R
Sbjct:  124 IEKGPVQNIQSTYPLNEF---GRSFSKVYFYRKLPNGEKFNREWLIYSPKNDATFCFCCKLFG--KQEIKLVNEGFNDWQHI---SDNLSRHEKTTLHIENCTCWKKLKLNLKRKTTIDKNMQRYYD-AEKKRWCQIVKRMISVVQFLAGQCLAFRGSSGKLYEKNNGNFLKAIEMIGKFDDTMADHIKR 304

HSP 2 Score: 46.2098 bits (108), Expect = 2.917e-16
Identity = 38/155 (24.52%), Postives = 64/155 (41.29%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            I   I+  K+F + L    D     Q++ V+RYV              ++    +    LE+          +I+++RGQGYD  S M   + GL   + +    A ++ C +H LNL + D  + +    +FF  V  +  F   S  R  V +
Sbjct:  339 ILTSIKEAKYFSVILDCTPDTGHVEQITMVIRYV--------------YIKNYEVELNYLEL----------NISDMRGQGYDNGSNMSGKHRGLQKRILDNYPRALFMPCNAHTLNLAINDAANVSFSTVDFFSNVSAVYNFFSASPFRWQVLK 469

HSP 3 Score: 26.9498 bits (58), Expect = 2.917e-16
Identity = 15/52 (28.85%), Postives = 25/52 (48.08%), Query Frame = 1 
Query: 1483 FRTLSIRNQSGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSS 1638
            FR   ++      T+K +S TRW +R+     + N    I  +L +I  +SS
Sbjct:  463 FRWQVLKKNVKSLTLKQVSETRWEARIKAIRPLRNELGEIYDSLIEIAEESS 514
[Close]
BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Match: SMESG000061124.1 (SMESG000061124.1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.422e-16
Identity = 49/190 (25.79%), Postives = 80/190 (42.11%), Query Frame = 2 
Query:  416 FRKGPEK---FAYPNTTFFVKERSF-QVQWYKDRP--------WLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWSNFGRTVLIDAQLALECKRQLEIGCKER--QQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQR 943
              KGP +     YP   F    RSF +V +Y+  P        WL Y  + D+ FCF C + G  K +     EG+ +W           +H K+  HI+N   W      +     +    +R  +   K+R  Q  + ++S++  LA   L FR +       N G FL    +I +++  +A H++R
Sbjct:  124 IEKGPVQNIQSTYPLNEF---GRSFSKVYFYRKLPNGEKFNREWLIYSPKNDATFCFCCKLFG--KQEIKLVNEGFNDWQHI---SDNLSRHEKTTLHIENCTCWKKLKLNLKRKTTIDKNMQRYYD-AEKKRWCQIVKRMISVVQFLAGQCLAFRGSSGKLYEKNNGNFLKAIEMIGKFDDTMADHIKR 304

HSP 2 Score: 45.8246 bits (107), Expect = 4.422e-16
Identity = 41/155 (26.45%), Postives = 66/155 (42.58%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            I   I+  K+F + L    D     Q++ V+RYV   + N E  L+             LE+          +I+++RGQGYD  S M   + GL   + +    A ++ C +H LNL + D  + +    +FF  V  +  F   S  R  V +
Sbjct:  339 ILTSIKEAKYFSVILDCTPDTGHVEQITMVIRYV--YIKNYEVELN------------YLEL----------NISDMRGQGYDNGSNMSGKHRGLQKRILDNYPRALFMPCNAHTLNLAINDAANVSFSTVDFFSNVSAVYNFFSASPFRWQVLK 469

HSP 3 Score: 26.9498 bits (58), Expect = 4.422e-16
Identity = 15/52 (28.85%), Postives = 25/52 (48.08%), Query Frame = 1 
Query: 1483 FRTLSIRNQSGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSS 1638
            FR   ++      T+K +S TRW +R+     + N    I  +L +I  +SS
Sbjct:  463 FRWQVLKKNVKSLTLKQVSETRWEARIKAIRPLRNELGEIYDSLIEIAEESS 514
[Close]
BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Match: SMESG000047334.1 (SMESG000047334.1)

HSP 1 Score: 50.8322 bits (120), Expect = 1.825e-14
Identity = 50/192 (26.04%), Postives = 80/192 (41.67%), Query Frame = 2 
Query:  416 FRKGPEK---FAYPNTTFFVKERSF-QVQWYKDRP--------WLEYHDEKDSVFCFDC*VIGQVKYDTTFQTEGYRNWSQALQKQKGFDKHSKSDCHIKNMKMWS----NFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNLRFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQR 943
              KGP +     YP   F    RSF +V +Y+  P         L Y  + D++FCF C + G  K +     EG+ +W           +H K+  HI+N   W     N  R   ID  +      + +  C   Q  + ++S++  LA   L FR +       N G FL    +I +++  +A H++R
Sbjct:  253 IEKGPVQNIQSTYPLNEF---GRSFSKVYFYRKLPNGEKFNRELLIYSPKNDAIFCFCCKLFG--KQEIKLVNEGFNDWQHI---SDNLSRHEKTTLHIENYTCWKKLELNLKRKTTIDKNMQRYYDAEKKRWC---QIVKRMISVVQFLAGQCLAFRGSSGILYEKNNGNFLKAIEMIGKFDDIMADHIKR 433

HSP 2 Score: 43.1282 bits (100), Expect = 1.825e-14
Identity = 37/155 (23.87%), Postives = 62/155 (40.00%), Query Frame = 3 
Query: 1026 IAEKIEMVKFFEIYLVTAQDLSKQNQLSFVVRYVNLSLDNIEALLDIEHVTEANIAKGLLEILSSIFKKYD*SITNIRGQGYDGCSTMRCYYSGL*ALVKEVSQTAYYVHCFSHRLNLVV-DICSKNVMARNFFGIVQKLICFIECSTKRHGVFQ 1487
            I   I+  K+F + L    D     Q++ V+RYV              H+    +    LE+          +I+++RGQGYD  S M   +  L   + +    A ++ C +H LNL + D  + +    +FF  V  +      S  R  V +
Sbjct:  468 ILTSIKEAKYFSVILDCTPDTGHVEQITMVIRYV--------------HIKNYEVELNYLEL----------NISDMRGQGYDNGSNMSGKHRRLQKRILDNYPRALFMPCNAHTLNLAINDAANVSFSTVDFFSNVSAIYNIFSASPFRWQVLK 598

HSP 3 Score: 25.0238 bits (53), Expect = 1.825e-14
Identity = 14/52 (26.92%), Postives = 25/52 (48.08%), Query Frame = 1 
Query: 1483 FRTLSIRNQSGCRTIKSLSSTRWNSRVNNCSVILNTPLIIMSTLEQITTDSS 1638
            FR   ++      T+K +S T+W +R+     + N    I  +L +I  +SS
Sbjct:  592 FRWQVLKKNVKSLTLKQVSETQWEARIKAIRPLRNELGEIYDSLIEIAEESS 643
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BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Match: SMESG000037368.1 (SMESG000037368.1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.430e-14
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -2 
Query: 1981 GNPQKF*I*NNLMITNYLI*-----KIFLLTIQRQCGLKLIE-VKFKIRNE*K-NTGEK*QNQNFE*LEIMIVF*KFT*WKISEELRKKRIRESYNKVTKAVEITMSNAPDEVLTN*LIMNKQGFPRI---*LNRSN*FYRKEMT*EEI 2397
            G P++F I NNLMI N+        KIFL  +QR  GLKL E ++ K  NE + +  +      +E  +I     +FT W ISEELR+ RIR +Y+K TKAVE+ + NA +EV  N  I  + GF  I    L + + F RK+MT  EI
Sbjct:   14 GEPKRFSIENNLMIPNWFHTDDREMKIFLFIVQRNSGLKLAEEIETKTENEYRMHIIDGKIKILYERWKIWNEVQRFTSWIISEELRQMRIRAAYDKATKAVEVRIPNAINEVPKNKPITEEPGFLSINDEMLRQKHLFLRKDMTLAEI 162
The following BLAST results are available for this feature:
BLAST of TTF-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ZMYM13.348e-1328.00zinc finger MYM-type containing 1 [Source:HGNC Sym... [more]
ZMYM13.348e-1328.00zinc finger MYM-type containing 1 [Source:HGNC Sym... [more]
ZMYM13.348e-1328.00zinc finger MYM-type containing 1 [Source:HGNC Sym... [more]
ZMYM13.348e-1328.00zinc finger MYM-type containing 1 [Source:HGNC Sym... [more]
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BLAST of TTF-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TTF-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TTF-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CR762475.12.293e-3537.01pep chromosome:GRCz11:4:55494751:55498830:1 gene:E... [more]
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BLAST of TTF-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
tbx184.344e-1432.93T-box 18 [Source:Xenbase;Acc:XB-GENE-489907][more]
slc10a62.444e-1228.19solute carrier family 10 (sodium/bile acid cotrans... [more]
ENSXETT00000043220.13.932e-1232.45pep primary_assembly:Xenopus_tropicalis_v9.1:7:364... [more]
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BLAST of TTF-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Zmym13.600e-826.77zinc finger, MYM domain containing 1 [Source:MGI S... [more]
Zmym13.600e-826.77zinc finger, MYM domain containing 1 [Source:MGI S... [more]
Zmym11.260e-627.10zinc finger, MYM domain containing 1 [Source:MGI S... [more]
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BLAST of TTF-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q5SVZ6|ZMYM1_HUMAN1.481e-1228.00Zinc finger MYM-type protein 1 OS=Homo sapiens OX=... [more]
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BLAST of TTF-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2S2PK681.192e-3530.69Zinc finger MYM-type protein 1 OS=Schizaphis grami... [more]
A0A444UHZ32.489e-3437.04Zinc finger MYM-type protein 1 OS=Acipenser ruthen... [more]
A0A1X7SXE61.815e-3330.41TTF-type domain-containing protein OS=Amphimedon q... [more]
A0A0G2L8483.179e-3237.01TTF-type domain-containing protein OS=Danio rerio ... [more]
J9M4223.246e-3234.39TTF-type domain-containing protein OS=Acyrthosipho... [more]
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BLAST of TTF-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000056429.11.085e-3132.84pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000042613.12.550e-3132.84pep primary_assembly:Astyanax_mexicanus-2.0:15:330... [more]
ENSAMXT00000025204.24.002e-2630.63pep primary_assembly:Astyanax_mexicanus-2.0:12:736... [more]
ENSAMXT00000042715.11.194e-2532.24pep primary_assembly:Astyanax_mexicanus-2.0:16:118... [more]
ENSAMXT00000044961.13.699e-2530.67pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
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BLAST of TTF-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TTF-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TTF-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of TTF-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000027735.13.181e-2730.41pep primary_assembly:ASM223467v1:9:30712608:307152... [more]
ENSORLT00000028133.13.386e-2429.45zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000042294.13.386e-2429.45zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000045044.13.386e-2429.45zinc finger MYM-type protein 1-like [Source:NCBI g... [more]
ENSORLT00000041223.14.137e-1728.30zinc finger MYM-type protein 1 [Source:NCBI gene;A... [more]
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BLAST of TTF-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000052596.12.104e-4170.21SMESG000052596.1[more]
SMESG000061124.12.917e-1625.79SMESG000061124.1[more]
SMESG000061124.14.422e-1625.79SMESG000061124.1[more]
SMESG000047334.11.825e-1426.04SMESG000047334.1[more]
SMESG000037368.14.430e-1441.61SMESG000037368.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30021431 ID=SMED30021431|Name=TTF-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3364bp
GAACCGAATTCATTTTAATTCATTCAGTGTTTTTTGATGTAAATAATTCA
ACTAAATCAAGTTGATGGACAAGTTTTTAATCAAACTGAAAAATGGCAAA
AAACAAGTGTCTCGGATCAGTTGACCAAAATGGGAAAATTATTGTTGAAA
ATGAGGAACCTGATCTAATTGGACGTAAAGAAGATGTGAATTCTGATTTC
AAAATTCCAACTTATCGTTTTGCACGTGACGGATACTATTTGATGAATTG
TCTATTCGACTAGCCTGATTTGAATAAATGCTGAGAGTGGTCCTTGAACT
GGTGGACTTCAGTGCAAATGTTCGTTCAATTGACAACTTCACTATGAAGG
CCTTTGAATTATTCTAACTTGATATTTTATTTTTGCATCATCACAATTTA
ATGTGTTTCTTTTATTTCAGGAAAGGACCTGAGAAATTTGCATATCCAAA
CACTACATTCTTTGTTAAGGAAAGATCATTTCAAGTCCAGTGGTATAAAG
ATAGACCTTGGCTGGAATACCACGATGAAAAGGATTCAGTCTTTTGCTTT
GATTGCTGAGTCATAGGACAAGTGAAATATGACACAACATTTCAGACAGA
GGGTTATCGAAATTGGTCACAGGCTCTACAAAAACAAAAAGGTTTTGACA
AGCACAGTAAATCAGACTGCCATATTAAAAACATGAAAATGTGGTCAAAC
TTCGGAAGAACAGTCTTAATCGATGCTCAGCTAGCACTTGAATGTAAGAG
ACAATTGGAAATTGGTTGTAAAGAGAGGCAGCAACGCCAAGAAATATTAT
CCCTCATAGACACATTGGCAAGGCCTAATCTTCGATTTCGGGTCAATGAG
AAAAGCACTGATTCATCAAACCGCGGATTATTCTTGGATATCAACAATCT
CATTGCAAGATGGAATCCAAACCTAGCAGCCCATTTACAACGGTCTTCTC
AAAAAGCAAAAGGTTACCCTAGCTATACATCACCATCCGCTTAACATTAG
ATGATCCAAACTGTCACTTCCTGATATTGCAGAAAAAATTGAAATGGTAA
AATTCTTTGAAATTTACCTCGTCACCGCACAAGATCTGAGCAAACAAAAC
CAGCTTTCGTTTGTTGTAAGATATGTCAATCTGTCTCTAGATAATATAGA
GGCTTTACTGGATATTGAGCATGTCACTGAAGCTAATATTGCTAAAGGTC
TGCTTGAGATACTCAGCAGCATATTTAAGAAATATGACTAGTCAATTACA
AACATTCGAGGACAGGGTTATGACGGATGCTCTACTATGAGATGTTACTA
CTCTGGATTGTAAGCACTTGTTAAGGAAGTGTCCCAAACTGCTTATTACG
TGCACTGTTTCTCGCATCGCCTTAACTTAGTTGTTGATATCTGTTCGAAG
AATGTTATGGCTAGAAACTTTTTTGGTATCGTACAGAAACTAATTTGCTT
TATTGAGTGTAGCACAAAGCGACATGGCGTATTTCAGGACATTATCGATC
CGAAATCAGTCTGGATGTCGAACTATAAAATCTTTAAGTTCCACACGTTG
GAACAGTCGAGTAAACAATTGTTCAGTGATTTTGAACACACCTCTAATAA
TTATGTCAACACTTGAACAGATCACAACAGATTCGTCTTACAAATGTAAA
ACAGGCGATGCATTCTATCAGTTATAAAAATTGCAACAACAAAACATTAA
TATTTTAGCAGCTACCATCCAACTGAAATAACTAATCAAAACAATTGCAG
ATTCTCGGAAGGACGATAGTTAGACTTGCACCAAATGATCAAATTTTTTG
CGCCCAACAAGTCTTCGTTTTCCATGATTCTCAAATTTTTACTTTTCTTG
GTAGACATTCTGGATTTGCCTAACTGTTAATTTTATGCTATTCCGTCCTT
TTGTAATCTTTTCGATGCCTAAGTTATTCTTTATTTCCAAACGTACCATA
TTTAACGTCTATGAATAACAACTGACTCCATATTTCTTCCTACGTCATTT
CCTTTCGATAAAATTAATTGCTTCTGTTTAATCATATCCGTGGAAATCCT
TGTTTATTCATGATAAGTTAATTTGTGAGAACTTCATCCGGTGCATTTGA
CATTGTTATTTCAACAGCTTTTGTAACTTTATTATATGATTCTCTAATCC
TTTTCTTCCTTAACTCTTCCGAAATTTTCCATTATGTAAATTTTTAAAAT
ACAATCATAATTTCCAATCATTCAAAATTTTGATTCTGCTATTTTTCACC
TGTATTCTTTCATTCATTTCTGATTTTAAACTTGACCTCAATTAATTTTA
GTCCGCATTGTCTTTGGATAGTTAATAAAAATATCTTCTATATCAAATAA
TTCGTGATCATTAGATTATTTTATATCTAGAATTTTTGTGGATTTCCATT
ATTTCTACTTCATCCTGTACTATATCTTATCCATAGATTAGTGTCATTTG
CTGGGGCGTTTGCGTATGTCCATGATTTAGCTTTTTATGTGCCCGCCTCT
AGTGGCCTGTTTTAATTGGTGCTTAATAAATATTAAGGAGTGACTGGGCC
ATGGAGTCCCTGTACATATATTGGTTAATATAAATTTTAAATTAACTGCT
ACTAAGAATTTTTGGTAGGGACACCTACATCTTATTTAGTGAATCGAATC
GTTCACATTGTGAATGGTTGAGGGTCGAATGGGCTTATCATTCGGGTAAT
TTGAGATCTCTCAATACTTTATCGTTGGGTCTGTATCTGAGTAACATTTG
CCTTACTGATTACCCGTATAGTGTTGCTTATAGTGACGGTTTCCATCGAA
TGTCCCGTATCGAGAGTATACAAATACTTAGTCATTAAATATTATTATAA
GTGTTCAACCTGTTCGATTCGGAGGGGCGCCAATGGTAATTAGATTGTCG
TTTTATTAGGTTTTTGGTCAATTATTTTAATTATCAATCACTTTTCCAGT
AGATTAACTTGCAAACGATTTTTTGGACAAAAATGTCCATTTTGTTTTTT
TAGTGACGTTTTCTTGGAAACTGAAAAACACCCTGCTTTGTGAATCTATG
ACTTTGTCAATTTTTTTATACTTTATTCATGTAAAACTAGCAGACATTCA
TAACTACTCAAATAAAATAGTTATGACAAGTTATTCTGTTTTGAGAAAAA
ATGGACATTTTTGTCCAAAATTCATTGTAGTAGGTAGTTAGGAGTACTCT
GCTACCACACACCATTTCATAATAATATAGGGGTGGGGGTTTTCACGTGA
TTATTTTTTGTGTGTAATGATTACTTAATGATGTAATTTTTTTGTGTGCA
ATTAATATTTTTTTTGTGTATTTTTTCGAAAATTTTTAAGTTGTGTATTT
TTTTTCGAAAATTT
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protein sequence of SMED30021431-orf-1

>SMED30021431-orf-1 ID=SMED30021431-orf-1|Name=SMED30021431-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=104bp
MKMWSNFGRTVLIDAQLALECKRQLEIGCKERQQRQEILSLIDTLARPNL
RFRVNEKSTDSSNRGLFLDINNLIARWNPNLAAHLQRSSQKAKGYPSYTS
PSA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000020protonephridia
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR025398DUF4371
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0016301kinase activity
GO:0046983protein dimerization activity
Vocabulary: biological process
TermDefinition
GO:0016310phosphorylation