Y box protein-1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30021386 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 19
Homology
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 87.0409 bits (214), Expect = 1.947e-17 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR 405 A QV G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Y P+ R + R Sbjct: 91 AIQVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSR-YAPNRRKSRR 182
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX2 (Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]) HSP 1 Score: 87.0409 bits (214), Expect = 1.947e-17 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR 405 A QV G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Y P+ R + R Sbjct: 91 AIQVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSR-YAPNRRKSRR 182
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX1 (Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]) HSP 1 Score: 83.1889 bits (204), Expect = 1.953e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 56 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 137
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 81.2629 bits (199), Expect = 7.411e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP+G V G + Sbjct: 88 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSR 169
BLAST of Y box protein-1 vs. Ensembl Human
Match: YBX3 (Y-box binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2428]) HSP 1 Score: 82.0333 bits (201), Expect = 9.295e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP+G V G + Sbjct: 88 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSR 169
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-1 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:O62213]) HSP 1 Score: 92.4337 bits (228), Expect = 6.498e-21 Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ KNGYGFI+ D N +DIFVH ++I NN SL D EEV+FDIV+G+KGLEA +VTGP+GG V G K Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTN--EDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSK 99
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-2 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91306]) HSP 1 Score: 80.1073 bits (196), Expect = 3.831e-16 Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 142 VTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT------SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 + G VKW+S YGFIS +D KDIFVH ++I A +AT +L D EEVLFD+V+G G EA NVTGPNG +VIG + Sbjct: 66 LQGKVKWYSVLRRYGFISRND--GEKDIFVHQTAI-AKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSR 145
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 75.485 bits (184), Expect = 2.055e-14 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 142 VTGHVKWFSSKNGYGFISVDDDNNS-KDIFVHHSSITANNAT-----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 V GHVKWFS + YGF++ D + +D FVH ++IT ++ +L D E V+FDIV+G KG EA NVTGP+G +V G + Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSR 171
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-4 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:G5EDV3]) HSP 1 Score: 75.485 bits (184), Expect = 2.055e-14 Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 142 VTGHVKWFSSKNGYGFISVDDDNNS-KDIFVHHSSITANNAT-----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 V GHVKWFS + YGF++ D + +D FVH ++IT ++ +L D E V+FDIV+G KG EA NVTGP+G +V G + Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSR 171
BLAST of Y box protein-1 vs. Ensembl Celegans
Match: cey-3 (C. Elegans Y-box [Source:UniProtKB/TrEMBL;Acc:P91398]) HSP 1 Score: 72.7886 bits (177), Expect = 8.834e-14 Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 142 VTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT-----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 + G VKW+S YGFIS D KD+FVH ++I+ ++ +LAD EEVLFD+V G G EA NVTGP G +V G K Sbjct: 64 LQGKVKWYSVLRRYGFISRSD--GEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFDLVDGKNGPEAANVTGPAGVNVSGSK 143
BLAST of Y box protein-1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0305992) HSP 1 Score: 80.1073 bits (196), Expect = 1.299e-15 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 A++VTG VKWF+ K+GYGFI+ +D +D+FVH S+I NN S+ DGE V FD+V G KG EA NVTGP+G V G Sbjct: 59 ATKVTGTVKWFNVKSGYGFINRND--TREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRG 138
BLAST of Y box protein-1 vs. Ensembl Fly
Match: yps (gene:FBgn0022959 transcript:FBtr0076027) HSP 1 Score: 80.1073 bits (196), Expect = 1.350e-15 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 A++VTG VKWF+ K+GYGFI+ +D +D+FVH S+I NN S+ DGE V FD+V G KG EA NVTGP+G V G Sbjct: 59 ATKVTGTVKWFNVKSGYGFINRND--TREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRG 138
BLAST of Y box protein-1 vs. Ensembl Fly
Match: lin-28 (gene:FBgn0035626 transcript:FBtr0077090) HSP 1 Score: 56.225 bits (134), Expect = 1.551e-8 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 148 GHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 G KWF+ G+GF++ +D +++FVH S I + SL + EEV F+ + ++GLEA V+ +GG G Sbjct: 41 GKCKWFNVAKGWGFLTPND--GGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQG 111
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 83.9593 bits (206), Expect = 5.993e-17 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 36 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 117
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 83.9593 bits (206), Expect = 5.993e-17 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 36 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 117
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: ybx1 (Y box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-000629-3]) HSP 1 Score: 83.5741 bits (205), Expect = 7.805e-17 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 36 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 117
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: lin28a (lin-28 homolog A (C. elegans) [Source:NCBI gene;Acc:394066]) HSP 1 Score: 63.1586 bits (152), Expect = 8.063e-11 Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDD-----NNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGG-KPYEPSDRSNNRGDR 414 +G KWF+ + G+GF+S+ ++ D+FVH S + SL +GE V F + +KGLE+ VTGP G +G K + + + ++GDR Sbjct: 29 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRSSKGLESLQVTGPGGAPCVGSEKKPKGTQKRRSKGDR 124
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Match: lin28a (lin-28 homolog A (C. elegans) [Source:NCBI gene;Acc:394066]) HSP 1 Score: 62.7734 bits (151), Expect = 1.393e-10 Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDD-----NNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGG-KPYEPSDRSNNRGDR 414 +G KWF+ + G+GF+S+ ++ D+FVH S + SL +GE V F + +KGLE+ VTGP G +G K + + + ++GDR Sbjct: 27 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRSSKGLESLQVTGPGGAPCVGSEKKPKGTQKRRSKGDR 122
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: ybx3 (Y-box binding protein 3 [Source:NCBI gene;Acc:548572]) HSP 1 Score: 82.4185 bits (202), Expect = 9.357e-17 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V G KG EA NVTGP G V G + Sbjct: 33 ATKVQGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEAANVTGPKGAPVQGSR 114
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 83.1889 bits (204), Expect = 1.461e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 34 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 115
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: hmgcs1 (3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:Xenbase;Acc:XB-GENE-942074]) HSP 1 Score: 80.8777 bits (198), Expect = 1.003e-15 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 ++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 43 TKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 123
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 66.6254 bits (161), Expect = 2.705e-11 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDN-----NSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 +GH KWF+ + G+GFIS+ N D+FVH S + SL +GE V F + +KG E+ VTGP G +G Sbjct: 34 SGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVTGPGGNPCLG 112
BLAST of Y box protein-1 vs. Ensembl Xenopus
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:100216028]) HSP 1 Score: 66.6254 bits (161), Expect = 2.912e-11 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDN-----NSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 +GH KWF+ + G+GFIS+ N D+FVH S + SL +GE V F + +KG E+ VTGP G +G Sbjct: 58 SGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVTGPGGNPCLG 136
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 82.4185 bits (202), Expect = 1.246e-16 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A QV G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Y P Sbjct: 15 AIQVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSR-YAP 99
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx1 (Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]) HSP 1 Score: 83.1889 bits (204), Expect = 1.247e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 54 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 135
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 82.4185 bits (202), Expect = 1.789e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP+G V G + Sbjct: 80 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSR 161
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx2 (Y box protein 2 [Source:MGI Symbol;Acc:MGI:1096372]) HSP 1 Score: 82.8037 bits (203), Expect = 2.510e-16 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A QV G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Y P Sbjct: 92 AIQVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSR-YAP 176
BLAST of Y box protein-1 vs. Ensembl Mouse
Match: Ybx3 (Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]) HSP 1 Score: 82.8037 bits (203), Expect = 3.134e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP+G V G + Sbjct: 80 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSR 161
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P41824|YBOXH_APLCA (Y-box factor homolog OS=Aplysia californica OX=6500 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.059e-18 Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRG 408 ASQV+G VKWF+ K+GYGFI+ DD +D+FVH ++I NN S+ DGE+V FD+V+G KG EA NVTGP G +V G K Y R RG Sbjct: 30 ASQVSGTVKWFNVKSGYGFINRDD--TKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSK-YAADRRRFRRG 122
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|Q9Y2T7|YBOX2_HUMAN (Y-box-binding protein 2 OS=Homo sapiens OX=9606 GN=YBX2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.351e-17 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR 405 A QV G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Y P+ R + R Sbjct: 91 AIQVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSR-YAPNRRKSRR 182
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P21573|YBOX1_XENLA (Y-box-binding protein 1 OS=Xenopus laevis OX=8355 GN=ybx1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.424e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 34 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPEGVPVQGSK 115
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|P45441|YBX2B_XENLA (Y-box-binding protein 2-B OS=Xenopus laevis OX=8355 GN=ybx2-b PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.689e-16 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A+QV G VKWF+ +NGYGFI+ +D + +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G + Sbjct: 39 ATQVQGTVKWFNVRNGYGFINRND--SKEDVFVHQTAIKKNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSR 120
BLAST of Y box protein-1 vs. UniProt/SwissProt
Match: sp|B5DE31|YBOX1_DANRE (Y-box-binding protein 1 OS=Danio rerio OX=7955 GN=ybx1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.524e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 36 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 117
BLAST of Y box protein-1 vs. TrEMBL
Match: I1ZIB0 (Y box protein-1 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.092e-53 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD 417 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD Sbjct: 20 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD 114
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A565DLG5 (Cold shock protein (Fragment) OS=Echiniscoides sigismundi OX=500494 GN=CSP PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.261e-19 Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITA----NNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 +QV G VKWF+++ G+GFI D +N DIFVHHS+I A +LADGE+V FD+VQG KGLEA NVTGPNG +V G + Y+P Sbjct: 13 TQVNGSVKWFNAQKGFGFIVRDGSDNGDDIFVHHSAIKAVDPNTTYRTLADGEQVTFDVVQGNKGLEAANVTGPNGNNVQGSR-YQP 98
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A3M7PA90 (Y-box factor-like protein OS=Brachionus plicatilis OX=10195 GN=BpHYR1_037785 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 8.285e-19 Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 +VTG VKWF+ KNGYGFIS+DD +DIF+HHS I NN S+ +GE+V FDIVQG KGLEA N+TGPNG V G K Sbjct: 35 QKVTGTVKWFNVKNGYGFISLDD--REEDIFIHHSGIARNNPKKQQKSVGEGEKVEFDIVQGEKGLEAANLTGPNGDPVQGSK 115
BLAST of Y box protein-1 vs. TrEMBL
Match: A7S475 (Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g104083 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.124e-18 Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR 405 A++VTG VKWF+ KNGYGFI+ DD N +DIFVH ++I NN S+ DGE V F++V G KGLEA NVTGP+G V G K R NNR Sbjct: 5 ATKVTGTVKWFNVKNGYGFINRDD--NKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVTGPDGEPVQGSKYAPDRRRRNNR 97
BLAST of Y box protein-1 vs. TrEMBL
Match: A0A261AUY1 (CSD_1 domain-containing protein (Fragment) OS=Caenorhabditis latens OX=1503980 GN=FL83_17696 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.460e-18 Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ KNGYGFI+ D N +DIFVH ++I NN SL D EEVLFDIV+G+KGLEA NVTGP+GG V G K Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTN--EDIFVHQTAIINNNPNKYLRSLGDNEEVLFDIVEGSKGLEASNVTGPDGGPVQGSK 99
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:103040011]) HSP 1 Score: 82.4185 bits (202), Expect = 1.476e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 37 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK 118
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 77.411 bits (189), Expect = 6.769e-15 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A+ V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+ KG EA NVTGP G V G + Y P Sbjct: 28 ATLVQGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSR-YAP 112
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: YBX2 (Y-box-binding protein 2-A-like [Source:NCBI gene;Acc:103036193]) HSP 1 Score: 77.0258 bits (188), Expect = 1.127e-14 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A+ V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+ KG EA NVTGP G V G + Y P Sbjct: 21 ATLVQGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKFLRSVGDGEIVEFDVVEATKGSEAANVTGPGGVPVKGSR-YAP 105
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: LIN28B (protein lin-28 homolog A [Source:NCBI gene;Acc:103022253]) HSP 1 Score: 65.4698 bits (158), Expect = 2.477e-11 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDNNSK-----DIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 +GH KWF+ + G+GFIS+ + D+FVH S + SL +GE V F + +KGLE VTGP G +G Sbjct: 30 SGHCKWFNVRMGFGFISMTSRGGNPIDPPLDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLECVRVTGPGGAHCVG 108
BLAST of Y box protein-1 vs. Ensembl Cavefish
Match: LIN28B (protein lin-28 homolog A [Source:NCBI gene;Acc:103022253]) HSP 1 Score: 65.4698 bits (158), Expect = 2.591e-11 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDNNSK-----DIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIG 366 +GH KWF+ + G+GFIS+ + D+FVH S + SL +GE V F + +KGLE VTGP G +G Sbjct: 38 SGHCKWFNVRMGFGFISMTSRGGNPIDPPLDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLECVRVTGPGGAHCVG 116
BLAST of Y box protein-1 vs. Ensembl Nematostella
Match: EDO41469 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S475]) HSP 1 Score: 92.4337 bits (228), Expect = 1.554e-22 Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNR 405 A++VTG VKWF+ KNGYGFI+ DD N +DIFVH ++I NN S+ DGE V F++V G KGLEA NVTGP+G V G K R NNR Sbjct: 5 ATKVTGTVKWFNVKNGYGFINRDD--NKEDIFVHQTAIAKNNPKKYLRSVGDGEVVEFNVVSGTKGLEASNVTGPDGEPVQGSKYAPDRRRRNNR 97
BLAST of Y box protein-1 vs. Ensembl Nematostella
Match: EDO44703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV03]) HSP 1 Score: 62.3882 bits (150), Expect = 7.640e-10 Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 142 VTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGG 369 TG VKWF+ G+GFI+ DD +D+FVH S+I A+ SL +GE V I KG A VT P GG+V G Sbjct: 483 CTGSVKWFNLIKGFGFITRDD--GGEDVFVHQSAIKASGYRSLEEGEHVQLTISNSDKGKVAICVTSPGGGNVKGA 556
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ybx1 (Y-box binding protein 1 [Source:NCBI gene;Acc:100049221]) HSP 1 Score: 81.6481 bits (200), Expect = 2.374e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGK 372 A++V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+V+G KG EA NVTGP G V G K Sbjct: 38 ATKVLGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSK 119
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ENSORLT00000007880.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 80.4925 bits (197), Expect = 1.966e-15 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A+ V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+++ AKG EA NVTGP G V G + Y P Sbjct: 109 ATAVQGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSR-YAP 193
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: ENSORLT00000007875.2 (Y-box binding protein 2 [Source:NCBI gene;Acc:100049372]) HSP 1 Score: 80.1073 bits (196), Expect = 2.227e-15 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNAT----SLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP 384 A+ V G VKWF+ +NGYGFI+ +D +D+FVH ++I NN S+ DGE V FD+++ AKG EA NVTGP G V G + Y P Sbjct: 109 ATAVQGTVKWFNVRNGYGFINRND--TKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSR-YAP 193
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:101160951]) HSP 1 Score: 69.707 bits (169), Expect = 8.480e-13 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDNNSK-----DIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGG----KPYEPSDRSNNRGDR 414 +G KWF+ + G+GFIS+ + S D+FVH S + SL +GE+V F + +KGLE+ VTGP GG +G K P + +GDR Sbjct: 34 SGFCKWFNVRMGFGFISMTNSEGSPVEPPLDVFVHQSKLVMEGFRSLKEGEQVEFTYKKSSKGLESLRVTGPGGGPCVGSERRPKGKVPLQKRKPKGDR 132
BLAST of Y box protein-1 vs. Ensembl Medaka
Match: lin28b (lin-28 homolog B [Source:NCBI gene;Acc:101160951]) HSP 1 Score: 69.707 bits (169), Expect = 1.179e-12 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 145 TGHVKWFSSKNGYGFISVDDDNNSK-----DIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGG----KPYEPSDRSNNRGDR 414 +G KWF+ + G+GFIS+ + S D+FVH S + SL +GE+V F + +KGLE+ VTGP GG +G K P + +GDR Sbjct: 41 SGFCKWFNVRMGFGFISMTNSEGSPVEPPLDVFVHQSKLVMEGFRSLKEGEQVEFTYKKSSKGLESLRVTGPGGGPCVGSERRPKGKVPLQKRKPKGDR 139
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058066.1 (SMESG000058066.1) HSP 1 Score: 195.667 bits (496), Expect = 1.956e-57 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1 Query: 133 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD 417 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD Sbjct: 3 ASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDRD 97
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058043.1 (SMESG000058043.1) HSP 1 Score: 153.68 bits (387), Expect = 2.588e-43 Identity = 79/96 (82.29%), Postives = 85/96 (88.54%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP-SDRSNNR-GDRD 417 SQV GHVKWF+SKNGYGFISVD+DN+ KDIFVH SI A NATSLADGEEVLFDIV+GAKGLEARNVTGPNGGDV+GG PYE +DR NNR GDRD Sbjct: 4 SQVVGHVKWFNSKNGYGFISVDNDNSDKDIFVHFKSIAAGNATSLADGEEVLFDIVEGAKGLEARNVTGPNGGDVVGGAPYEQNNDRFNNRGGDRD 99
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000058039.1 (SMESG000058039.1) HSP 1 Score: 148.288 bits (373), Expect = 2.036e-41 Identity = 76/96 (79.17%), Postives = 83/96 (86.46%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEP-SDRSNNR-GDRD 417 SQVTGHVKWF+SKNGYGFISVD++ KD+FVH SI A NATSLADGEEVLFDIV+GAKGLEARNVTGPNGGDV+GG YE +DR NNR GDRD Sbjct: 4 SQVTGHVKWFNSKNGYGFISVDNERCDKDVFVHFKSIAATNATSLADGEEVLFDIVEGAKGLEARNVTGPNGGDVVGGAQYEQNNDRFNNRGGDRD 99
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000073546.1 (SMESG000073546.1) HSP 1 Score: 132.109 bits (331), Expect = 1.162e-34 Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSD-RSNNR 405 S+VTGHVKWF++K+GYGFI D D D+FVHHSSITA N+ SLADGEEVLFD+++G KGLEARNV GP+GG+V+GGKPY+P+D RSN R Sbjct: 9 SKVTGHVKWFNTKSGYGFIKKDVD--GADVFVHHSSITATNSNSLADGEEVLFDVIEGPKGLEARNVCGPDGGNVVGGKPYQPNDNRSNIR 97
BLAST of Y box protein-1 vs. Planmine SMEST
Match: SMESG000078868.1 (SMESG000078868.1) HSP 1 Score: 129.413 bits (324), Expect = 1.594e-34 Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 1 Query: 136 SQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADGEEVLFDIVQGAKGLEARNVTGPNGGDVIGGKPYEPSDRSNNRGDR 414 ++V GHVKWF+SK+GYGFI +D +S D+FVHHSSI A NA SLADGEEV FD+VQG+KGLEARNVTGPNGGDV+GGKPY + + + G+R Sbjct: 7 TKVNGHVKWFNSKSGYGFIRREDRKDS-DVFVHHSSIVATNANSLADGEEVQFDVVQGSKGLEARNVTGPNGGDVVGGKPYFQQNDNRSYGNR 98 The following BLAST results are available for this feature:
BLAST of Y box protein-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Y box protein-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Y box protein-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Y box protein-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Y box protein-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Y box protein-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Y box protein-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Y box protein-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Y box protein-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30021386 ID=SMED30021386|Name=Y box protein-1|organism=Schmidtea mediterranea sexual|type=transcript|length=2937bpback to top protein sequence of SMED30021386-orf-1 >SMED30021386-orf-1 ID=SMED30021386-orf-1|Name=SMED30021386-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=175bp MTASQVTGHVKWFSSKNGYGFISVDDDNNSKDIFVHHSSITANNATSLADback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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