Subcommissural organ spondin

Overview
NameSubcommissural organ spondin
Smed IDSMED30021305
Length (bp)2135
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Subcommissural organ spondin (SMED30021305) t-SNE clustered cells

Violin plots show distribution of expression levels for Subcommissural organ spondin (SMED30021305) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Subcommissural organ spondin (SMED30021305) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Subcommissural organ spondin (SMED30021305) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30021305

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 41

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_015921SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_015920SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_015919SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_074463SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_019902SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 SmedASXL_025596SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig46457uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig46457newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig45454newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig45454uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018854 Contig14068uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018854 Contig14068newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018855 Contig10526newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018855 Contig10526uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig10526newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig10526uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018853 Contig14068uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018853 Contig14068newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018855 Contig14068uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018855 Contig14068newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig14068uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30021305h1SMcG0018856 Contig14068newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
gutSMED30021305h1SMcG0018856 dd_Smed_v4_651_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30021305h1SMcG0018856 dd_Smed_v4_651_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30021305h1SMcG0018856 dd_Smed_v4_651_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30021305h1SMcG0018856 dd_Smed_v4_1647_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30021305h1SMcG0018856 dd_Smed_v4_10746_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30021305h1SMcG0018856 dd_Smed_v4_10746_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30021305h1SMcG0018855 dd_Smed_v4_10746_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30021305h1SMcG0018855 dd_Smed_v4_10746_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 dd_Smed_v6_651_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 dd_Smed_v6_1647_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 dd_Smed_v6_10746_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018855 dd_Smed_v6_10746_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30021305h1SMcG0018856 dd_Smed_v6_12625_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
head regionSMED30021305h1SMcG0018856 OX_Smed_1.0.05555ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
reproductive organSMED30021305h1SMcG0018856 Contig46551newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30021305h1SMcG0018856 Contig46551uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Category 2 cellSMED30021305h1SMcG0018856 dd_Smed_v4_651_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
epidermisSMED30021305h1SMcG0018856 dd_Smed_v4_1647_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
gutSMED30021305h1SMcG0018856 dd_Smed_v4_651_0_1dd_Smed_v4PMID:30962434
Cote et al., 2019		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Human
Match: MUC6 (mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517])

HSP 1 Score: 69.707 bits (169), Expect = 1.705e-11
Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNN-NGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTC 1194
            +C  TC +LA   G++  P+KC PGC C EG+  N +G+C+   ECPC F+G +Y  G ++ T+  C+   C++        ++CPSTC
Sbjct:  784 ACAPTCQMLA--TGVACVPTKCEPGCVCAEGLYENADGQCVPPEECPCEFSGVSYPGGAELHTD--CRTCSCSRGRWACQQGTHCPSTC 868

HSP 2 Score: 67.781 bits (164), Expect = 7.414e-11
Identity = 51/204 (25.00%), Postives = 88/204 (43.14%), Query Frame = 1 
Query:  913 FVHVNCSCQQTCDLLAENNGISKCPSKCIP--GCQCPEGM-VNNNGKCIKVSECPCYFNGKTYAFGDK--IQTNDPCKV----LVCTKDSLQELTVSNCPST---CKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCP 1482
            F + + +C++TC  L+ ++  ++C    +P  GC CP+G  +N  G+C++ ++CPC   G  +   ++  +     C      L C +     L     P T   C ++        C  TC        C    C+ GC C EG ++     +CV  + CPC +   +Y  G     +C  C C   +G +  ++G H   CP
Sbjct:  670 FSYNSQACERTC--LSLSDRATECHHSAVPVDGCNCPDGTYLNQKGECVRKAQCPCILEGYKFILAEQSTVINGITCHCINGRLSCPQRPQMFLASCQAPKTFKSCSQSSENKFGAACAPTCQMLATGVACVPTKCEPGCVCAEG-LYENADGQCVPPEECPCEFSGVSYPGGAELHTDCRTCSCS--RGRWACQQGTH---CP 865
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Human
Match: MUC6 (mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517])

HSP 1 Score: 68.5514 bits (166), Expect = 4.599e-11
Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNN-NGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTC 1194
            +C  TC +LA   G++  P+KC PGC C EG+  N +G+C+   ECPC F+G +Y  G ++ T+  C+   C++        ++CPSTC
Sbjct:  784 ACAPTCQMLA--TGVACVPTKCEPGCVCAEGLYENADGQCVPPEECPCEFSGVSYPGGAELHTD--CRTCSCSRGRWACQQGTHCPSTC 868

HSP 2 Score: 65.855 bits (159), Expect = 3.058e-10
Identity = 51/204 (25.00%), Postives = 88/204 (43.14%), Query Frame = 1 
Query:  913 FVHVNCSCQQTCDLLAENNGISKCPSKCIP--GCQCPEGM-VNNNGKCIKVSECPCYFNGKTYAFGDK--IQTNDPCKV----LVCTKDSLQELTVSNCPST---CKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCP 1482
            F + + +C++TC  L+ ++  ++C    +P  GC CP+G  +N  G+C++ ++CPC   G  +   ++  +     C      L C +     L     P T   C ++        C  TC        C    C+ GC C EG ++     +CV  + CPC +   +Y  G     +C  C C   +G +  ++G H   CP
Sbjct:  670 FSYNSQACERTC--LSLSDRATECHHSAVPVDGCNCPDGTYLNQKGECVRKAQCPCILEGYKFILAEQSTVINGITCHCINGRLSCPQRPQMFLASCQAPKTFKSCSQSSENKFGAACAPTCQMLATGVACVPTKCEPGCVCAEG-LYENADGQCVPPEECPCEFSGVSYPGGAELHTDCRTCSCS--RGRWACQQGTH---CP 865
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Human
Match: MUC5B (mucin 5B, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7516])

HSP 1 Score: 66.6254 bits (161), Expect = 1.504e-10
Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1 
Query:  913 FVHVNCSCQQTCDLLAENN---GISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST-CKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            + +V  +CQ TC  L+E +    +S  P   + GC CP G  +N+ G C+   ECPCY +G   A G+ +  +D   V  CT   L  L  S   ST C   M+   C N         C R+C  + ++  C    C SGC CP G V S+    C+  + CPC +   TY+ G+    +C  C C
Sbjct:  701 YAYVVDACQPTCRGLSEADVTCSVSFVP---VDGCTCPAGTFLNDAGACVPAQECPCYAHGTVLAPGEVV--HDEGAVCSCTGGKLSCLGASLQKSTGCAAPMVYLDCSNSSAGTPGAECLRSC--HTLDVGCFSTHCVSGCVCPPGLV-SDGSGGCIAEEDCPCVHNEATYKPGETIRVDCNTCTC 879
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Human
Match: MUC5AC (mucin 5AC, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7515])

HSP 1 Score: 63.1586 bits (152), Expect = 1.762e-9
Identity = 56/184 (30.43%), Postives = 83/184 (45.11%), Query Frame = 1 
Query:  919 HVNCSCQQTCDLLAENNGISKCPSKCIP--GCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCD 1428
            HV+ +CQ TC  L+E  G   C    IP  GC CP+G  +++ GKC++ S CPCY  G     G+ +  +D   +  CT   L  +        C   M+   C N         C ++C  + ++  C    C  GC CP+G V ++    C+  + CPC +   +Y  GQ     C  C CD
Sbjct:  713 HVS-TCQPTCRSLSE--GDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNCPCYHRGSMIPNGESV--HDSGAICTCTHGKLSCIGGQAPAPVCAAPMVFFDCRNATPGDTGAGCQKSC--HTLDMTCYSPQCVPGCVCPDGLV-ADGEGGCITAEDCPCVHNEASYRAGQTIRVGCNTCTCD 888
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Human
Match: MUC5AC (mucin 5AC, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7515])

HSP 1 Score: 63.1586 bits (152), Expect = 1.762e-9
Identity = 56/184 (30.43%), Postives = 83/184 (45.11%), Query Frame = 1 
Query:  919 HVNCSCQQTCDLLAENNGISKCPSKCIP--GCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCD 1428
            HV+ +CQ TC  L+E  G   C    IP  GC CP+G  +++ GKC++ S CPCY  G     G+ +  +D   +  CT   L  +        C   M+   C N         C ++C  + ++  C    C  GC CP+G V ++    C+  + CPC +   +Y  GQ     C  C CD
Sbjct:  713 HVS-TCQPTCRSLSE--GDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNCPCYHRGSMIPNGESV--HDSGAICTCTHGKLSCIGGQAPAPVCAAPMVFFDCRNATPGDTGAGCQKSC--HTLDMTCYSPQCVPGCVCPDGLV-ADGEGGCITAEDCPCVHNEASYRAGQTIRVGCNTCTCD 888
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Match: vwf (von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1])

HSP 1 Score: 59.6918 bits (143), Expect = 1.514e-8
Identity = 64/224 (28.57%), Postives = 102/224 (45.54%), Query Frame = 1 
Query:  850 TSRQISLNLVVYG-CGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSKCIPGCQCPEGM-VNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKV-----LVCTKDSLQELTVSNC------PS------TCKETMIPCTCEN-------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDE 1431
             +R + +N   +G C   C    V+  C   C QTC  L+  +  + C   C  GC CP G+ +++ G+C+    C C+ NG+ +   D I  +    V     + CT +     T+S+       PS      +C   +    CE+       C +TC   N+E +C  +GC SGC CP G V       C+  + CPC + ++ YE GQ+ T +C  C C++
Sbjct:  613 AARGVLVNWRSHGYCELTCPDAQVYEMCGSVCNQTCRSLSLPD--TGCDGVCEEGCFCPRGLFLSDAGECVPPQHCSCHHNGEIFEPNDMIGDHHSICVCESGSMHCTSNEATGSTLSDLFFDEQSPSRGRRSLSCPPPLQRFECESARDAGIECAKTCQ--NLELDCVSLGCVSGCMCPPGTV--RYRKDCIPQEQCPCYHNSRPYESGQSITVDCNTCVCEQ 830
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Match: vwf (von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1])

HSP 1 Score: 59.6918 bits (143), Expect = 1.539e-8
Identity = 64/224 (28.57%), Postives = 102/224 (45.54%), Query Frame = 1 
Query:  850 TSRQISLNLVVYG-CGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSKCIPGCQCPEGM-VNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKV-----LVCTKDSLQELTVSNC------PS------TCKETMIPCTCEN-------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDE 1431
             +R + +N   +G C   C    V+  C   C QTC  L+  +  + C   C  GC CP G+ +++ G+C+    C C+ NG+ +   D I  +    V     + CT +     T+S+       PS      +C   +    CE+       C +TC   N+E +C  +GC SGC CP G V       C+  + CPC + ++ YE GQ+ T +C  C C++
Sbjct:  627 AARGVLVNWRSHGYCELTCPDAQVYEMCGSVCNQTCRSLSLPD--TGCDGVCEEGCFCPRGLFLSDAGECVPPQHCSCHHNGEIFEPNDMIGDHHSICVCESGSMHCTSNEATGSTLSDLFFDEQSPSRGRRSLSCPPPLQRFECESARDAGIECAKTCQ--NLELDCVSLGCVSGCMCPPGTV--RYRKDCIPQEQCPCYHNSRPYESGQSITVDCNTCVCEQ 844
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Match: muc5.3 (mucin 5.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1562])

HSP 1 Score: 58.9214 bits (141), Expect = 2.609e-8
Identity = 56/177 (31.64%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            SC +TC  L++ +G        + GC C EG  +N NG C++ + C CY +GK  A G+ I  +      +C +  L    VSN    C E M    C +         C ++C  N ++  C   GC SGC CP G V S+    C+    CPC +   TY+ G++   +C  C C
Sbjct:  700 SCGRTCRSLSQADGSCTHDHVLVDGCGCAEGKYMNENGDCVEAAACSCYDSGKVVALGETISKDG--GSCICQQGKLSCSGVSNG-EECTEPMRFFNCSSASPGSEGAECQKSC--NTLDMACISTGCVSGCVCPSGLV-SDGNGGCIDKDQCPCIHNGHTYQSGESIKIDCNTCSC 870
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Match: scospondin (subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1])

HSP 1 Score: 56.9954 bits (136), Expect = 1.074e-7
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 1 
Query:  994 CIPGCQCPEGMVNN-NGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCP--STCKETMIPCTCENCHRTCNKNN--IEANCQLMGCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRCDEIK 1437
            C+ GCQCP+G+  +  G+C+ V  CPC      +  G  I  N  C   VC +  +   T  +CP  + C  ++I  +  +C RTC+  N  ++A  + +    GC CPEG V   + D+CVK   CPC +  + Y      + +C  C C E +
Sbjct:  854 CVSGCQCPDGLAQDAQGQCVPVHMCPCKSGDTLHPAGSSINNN--CNTCVCAR-GVWNCTDLSCPELNQCPGSLI-FSPRSCLRTCSSPNSPLDACTEPI---HGCICPEGTVL--LGDQCVKPDECPCHHNGRLYFTNDTISKDCNTCVCREQR 999
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Match: otogl (otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93])

HSP 1 Score: 56.6102 bits (135), Expect = 1.111e-7
Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 1 
Query:  889 CGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTC 1194
            C   C   FVH +C   C  TC    E  G +     C+ GC CP+G++  NG CI VS+CPC ++G  Y  G  ++    C V VC    L   T +NC + C
Sbjct:  297 CADRCEDSFVHRDCISCCPPTCTFDKECLGTNL---HCLDGCYCPDGLILQNGTCIAVSQCPCVYHGTAYPLGHVLEQG--CTVCVCMG-GLWNCTENNCTAEC 394
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Match: ENSXETT00000018702.1 (mucin-2-like [Source:NCBI gene;Acc:100495470])

HSP 1 Score: 67.3958 bits (163), Expect = 7.324e-11
Identity = 58/193 (30.05%), Postives = 84/193 (43.52%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSN--CPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCH 1467
            SCQ TC  L+E +         + GC CP G  ++ +G C+    CPCY+ G     G+ I  N             Q +  SN  C + C E M+   C N         C +TC  + ++ +C  + C SGC CP+G V +     CV  + CPC +  + Y  G+    +C  C C + K   C  K CH
Sbjct:  634 SCQPTCRSLSEPDPTCSVSFPPVDGCGCPNGTYLDESGSCVPDHNCPCYYKGTPMPAGEVIYDN-----------GAQAIETSNIFCLTECPENMVYFDCANASMGARGAECQKTC--HTLDMDCISIQCASGCICPDGLVLNNN-GSCVPEEQCPCMHNGEMYHSGETIQQDCNTCVCKDRKWN-CTNKACH 811

HSP 2 Score: 51.2174 bits (121), Expect = 7.554e-6
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  871 NLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPS-KCIPGCQCPEGMV-NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTC 1242
            N+V + C    +         CQ+TC  L  +     C S +C  GC CP+G+V NNNG C+   +CPC  NG+ Y  G+ IQ +  C   V                 CK+    CT + CHR+C
Sbjct:  716 NMVYFDCANASMGA---RGAECQKTCHTLDMD-----CISIQCASGCICPDGLVLNNNGSCVPEEQCPCMHNGEMYHSGETIQQD--CNTCV-----------------CKDRKWNCTNKACHRSC 814
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Match: ENSXETT00000006505.1 (SCO-spondin [Source:NCBI gene;Acc:100497129])

HSP 1 Score: 64.3142 bits (155), Expect = 7.209e-10
Identity = 60/181 (33.15%), Postives = 88/181 (48.62%), Query Frame = 1 
Query:  901 CLPPFVHVNCSCQQTC-DLLAENNGISKCPSKCIPGCQCPEGMV-NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCP--STCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            C PP       C++TC DL     G  +    C+ GC CPEG+V + +G+C+  + C C+   +T+  G KIQ N  CK  VC ++ +   T S+CP  + C   M+  +  +C  TC  +++E N        GC CPEG     +LD CV  + CPC +  K Y        +C  C C
Sbjct:  815 CTPP-------CRKTCADLRMAGTGSCQELEGCVAGCNCPEGLVLDESGQCVPPNMCQCHHGAETHQPGSKIQQN--CKSCVC-ENGVWNCTGSSCPEAAYCPGNMV-YSPGSCLLTC--DSLERNGTCSDTLDGCVCPEGTA---LLDSCVLPEDCPCHHHGKLYHPNDTIVKDCNTCVC 979
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Match: ENSXETT00000033057.1 (mucin-2-like [Source:NCBI gene;Acc:100495470])

HSP 1 Score: 63.1586 bits (152), Expect = 1.761e-9
Identity = 57/191 (29.84%), Postives = 84/191 (43.98%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCH 1467
            SCQ TC  L+E +         + GC CP G  ++ +G C+    CPCY+ G     G+ I  N    +  C    LQ +  +     C E M+   C N         C +TC  + ++ +C  + C SGC CP+G V +     CV  + CPC +  + Y  G+    +C  C C + K   C  K CH
Sbjct:  676 SCQPTCRSLSEPDPTCSVSFPPVDGCGCPNGTYLDESGSCVPDHNCPCYYKGTPMPAGEVIYDNG--AMCTCQSGRLQCVGKT---LKCPENMVYFDCANASMGARGAECQKTC--HTLDMDCISIQCASGCICPDGLVLNN-NGSCVPEEQCPCMHNGEMYHSGETIQQDCNTCVCKDRKWN-CTNKACH 857

HSP 2 Score: 51.2174 bits (121), Expect = 7.177e-6
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  871 NLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPS-KCIPGCQCPEGMV-NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTC 1242
            N+V + C    +         CQ+TC  L  +     C S +C  GC CP+G+V NNNG C+   +CPC  NG+ Y  G+ IQ +  C   V                 CK+    CT + CHR+C
Sbjct:  762 NMVYFDCANASMGA---RGAECQKTCHTLDMD-----CISIQCASGCICPDGLVLNNNGSCVPEEQCPCMHNGEMYHSGETIQQD--CNTCV-----------------CKDRKWNCTNKACHRSC 860
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Match: ENSXETT00000033131.1 (mucin-2-like [Source:NCBI gene;Acc:100495470])

HSP 1 Score: 62.7734 bits (151), Expect = 2.207e-9
Identity = 55/190 (28.95%), Postives = 82/190 (43.16%), Query Frame = 1 
Query:  934 CQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCH 1467
            CQ TC  L+E +         + GC CP G  ++ +G C+    CPCY+ G     G+ I             D+  E +   C + C E M+   C N         C +TC  + ++ +C  + C SGC CP+G V +     CV  + CPC +  + Y  G+    +C  C C + K   C  K CH
Sbjct:  626 CQPTCRSLSEPDPTCSVSFPPVDGCGCPNGTYLDESGSCVPDHNCPCYYKGTPMPAGEVIY------------DNAIETSNIFCLTECPENMVYFDCANASMGARGAECQKTC--HTLDMDCISIQCASGCICPDGLVLNN-NGSCVPEEQCPCMHNGEMYHSGETIQQDCNTCVCKDRKWN-CTNKACH 799

HSP 2 Score: 53.1434 bits (126), Expect = 1.851e-6
Identity = 46/156 (29.49%), Postives = 70/156 (44.87%), Query Frame = 1 
Query:  796 FEKTSILSFKLLFMKRFETSRQISL-----NLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPS-KCIPGCQCPEGMV-NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTC 1242
            ++ T + + ++++    ETS    L     N+V + C    +         CQ+TC  L  +     C S +C  GC CP+G+V NNNG C+   +CPC  NG+ Y  G+ IQ +  C   V                 CK+    CT + CHR+C
Sbjct:  674 YKGTPMPAGEVIYDNAIETSNIFCLTECPENMVYFDCANASMGA---RGAECQKTCHTLDMD-----CISIQCASGCICPDGLVLNNNGSCVPEEQCPCMHNGEMYHSGETIQQD--CNTCV-----------------CKDRKWNCTNKACHRSC 802
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Match: ENSXETT00000018772.1 (mucin-2-like [Source:NCBI gene;Acc:100495470])

HSP 1 Score: 62.7734 bits (151), Expect = 2.230e-9
Identity = 57/196 (29.08%), Postives = 83/196 (42.35%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDP-----CKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCH 1467
            SCQ TC  L+E +         + GC CP G  ++ +G C+    CPCY+ G     G+ I  N          L C   +L+          C E M+   C N         C +TC  + ++ +C  + C SGC CP+G V +     CV  + CPC +  + Y  G+    +C  C C + K   C  K CH
Sbjct:  676 SCQPTCRSLSEPDPTCSVSFPPVDGCGCPNGTYLDESGSCVPDHNCPCYYKGTPMPAGEVIYDNGAMCTCQSGRLQCVGKTLK----------CPENMVYFDCANASMGARGAECQKTC--HTLDMDCISIQCASGCICPDGLVLNN-NGSCVPEEQCPCMHNGEMYHSGETIQQDCNTCVCKDRKWN-CTNKACH 857

HSP 2 Score: 51.6026 bits (122), Expect = 5.787e-6
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 1 
Query:  871 NLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPS-KCIPGCQCPEGMV-NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTC 1242
            N+V + C    +         CQ+TC  L  +     C S +C  GC CP+G+V NNNG C+   +CPC  NG+ Y  G+ IQ +  C   V                 CK+    CT + CHR+C
Sbjct:  762 NMVYFDCANASMGA---RGAECQKTCHTLDMD-----CISIQCASGCICPDGLVLNNNGSCVPEEQCPCMHNGEMYHSGETIQQD--CNTCV-----------------CKDRKWNCTNKACHRSC 860
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Match: Muc5ac (mucin 5, subtypes A and C, tracheobronchial/gastric [Source:MGI Symbol;Acc:MGI:104697])

HSP 1 Score: 65.855 bits (159), Expect = 1.685e-10
Identity = 57/190 (30.00%), Postives = 86/190 (45.26%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKT--CPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGC 1464
            +CQ TC  L E +         + GC CP+G  +++ GKC++ + CPCY+ G T   G+ +Q  D   +  CT+ +L  +        C   MI   C N         C ++C  + ++  C    C  GC CP G V ++    CV T  CPC +   TY  G+     C +C C E +   C +K C
Sbjct:  714 TCQPTCRALNEKDVTCHVSFIPVDGCTCPKGTFLDDLGKCVQATSCPCYYKGSTVPNGESVQ--DSGAICTCTQGALTCIGGPAPTPVCDAPMIYFDCHNATPGDTGAGCQKSC--HTLDMTCYSSECVPGCVCPNGLV-ADGNGGCVVTEDCPCVHNEATYRPGETIQVGCNNCTC-ENRMWQCTDKPC 897
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Match: Muc5ac (mucin 5, subtypes A and C, tracheobronchial/gastric [Source:MGI Symbol;Acc:MGI:104697])

HSP 1 Score: 65.855 bits (159), Expect = 1.685e-10
Identity = 57/190 (30.00%), Postives = 86/190 (45.26%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKT--CPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGC 1464
            +CQ TC  L E +         + GC CP+G  +++ GKC++ + CPCY+ G T   G+ +Q  D   +  CT+ +L  +        C   MI   C N         C ++C  + ++  C    C  GC CP G V ++    CV T  CPC +   TY  G+     C +C C E +   C +K C
Sbjct:  714 TCQPTCRALNEKDVTCHVSFIPVDGCTCPKGTFLDDLGKCVQATSCPCYYKGSTVPNGESVQ--DSGAICTCTQGALTCIGGPAPTPVCDAPMIYFDCHNATPGDTGAGCQKSC--HTLDMTCYSSECVPGCVCPNGLV-ADGNGGCVVTEDCPCVHNEATYRPGETIQVGCNNCTC-ENRMWQCTDKPC 897
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Match: Muc5ac (mucin 5, subtypes A and C, tracheobronchial/gastric [Source:MGI Symbol;Acc:MGI:104697])

HSP 1 Score: 65.855 bits (159), Expect = 2.093e-10
Identity = 57/190 (30.00%), Postives = 86/190 (45.26%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKT--CPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGC 1464
            +CQ TC  L E +         + GC CP+G  +++ GKC++ + CPCY+ G T   G+ +Q  D   +  CT+ +L  +        C   MI   C N         C ++C  + ++  C    C  GC CP G V ++    CV T  CPC +   TY  G+     C +C C E +   C +K C
Sbjct:  715 TCQPTCRALNEKDVTCHVSFIPVDGCTCPKGTFLDDLGKCVQATSCPCYYKGSTVPNGESVQ--DSGAICTCTQGALTCIGGPAPTPVCDAPMIYFDCHNATPGDTGAGCQKSC--HTLDMTCYSSECVPGCVCPNGLV-ADGNGGCVVTEDCPCVHNEATYRPGETIQVGCNNCTC-ENRMWQCTDKPC 898
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Match: Muc5b (mucin 5, subtype B, tracheobronchial [Source:MGI Symbol;Acc:MGI:1921430])

HSP 1 Score: 64.6994 bits (156), Expect = 4.332e-10
Identity = 59/184 (32.07%), Postives = 85/184 (46.20%), Query Frame = 1 
Query:  913 FVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST-CKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            + +   SCQ TC  L+E +     P   + GC CPEG  +N+   C+ V ECPCYF+G   A  + +  N    V  CT   L  L      ST C+  M+   C N         C ++C+  ++E  C    C SGC CP G V ++    C+  + CPC +   TY  G+    +C +C C
Sbjct:  705 YFYSVSSCQPTCRSLSEADVTCSVPFVTVDGCTCPEGTFLNDKDHCVPVEECPCYFHGTVVAPREVVTDNG--VVCSCTNGKLTCLGALMQKSTECQAPMVYLDCNNASVGHHGAECLKSCHTLDVE--CFSTQCVSGCVCPSGLV-ADGNGGCIAEEDCPCIHNEVTYRPGEIIRVDCNNCTC 883
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Match: Muc19 (mucin 19 [Source:MGI Symbol;Acc:MGI:2676278])

HSP 1 Score: 61.2326 bits (147), Expect = 3.863e-9
Identity = 53/158 (33.54%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:  997 IPGCQCPEGMVNNN-GKCIKVSECPCYFNGKTYAFGDKIQTND---PCKVLVCTKDSLQELTVSNCPSTCK--ETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAF 1446
            + GC CP+GM  NN G C++ SEC CY N +    G  I  +D    C+  V    +  +LT+ NC    +  +   P       RTC   NI      + CK GC CP G V +     C+    CPCS+ ++ YE G   +  C +C C  IKG++
Sbjct:  128 VDGCTCPDGMYQNNEGNCVQKSECDCYVNDEIVQPGKSILIDDNKCVCQDGVLHCQTPLDLTLQNCSRGAEYIDCKDPKAQRRTERTCATRNIPDFEGDLPCKRGCYCPVGMVRNS-KGICIHPDDCPCSFGDREYEQGSVTSVGCNECTC--IKGSW 282
[Close]
BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Match: sp|Q7Z5P9|MUC19_HUMAN (Mucin-19 OS=Homo sapiens OX=9606 GN=MUC19 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 2.485e-15
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNN-GKCIKVSECPCYFNGKTYAFGDKIQTNDP---CK--VLVCTKDSLQELTVSNCPSTCK--ETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAF-CVEKGCH 1467
            +C  +C  L+E +         + GC CP+ M  NN G C+  S+C CY N +    G  I  +D    C+  +L+C      +LT+ NC    +  +   P      +RTC+  NI    + + CK GC CPEG V +     CV    CPCS+  + Y+ G   +  C +C C  IKG++ C +  C 
Sbjct: 1089 ACNSSCRSLSERDRSCDVEDVPVDGCTCPDAMYQNNEGNCVLKSQCDCYINDEVMQPGKLIHIDDNKCVCRDGILLCQIPI--DLTLQNCSGGAEYVDCSDPKAQRRTNRTCSTRNIPVFDENLPCKRGCFCPEGMVRNS-KGICVFPNDCPCSFGGREYDEGSVTSVGCNECTC--IKGSWSCTQNECQ 1273
[Close]
BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Match: sp|Q6PZE0|MUC19_MOUSE (Mucin-19 OS=Mus musculus OX=10090 GN=Muc19 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.551e-12
Identity = 60/191 (31.41%), Postives = 86/191 (45.03%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNN-GKCIKVSECPCYFNGKTYAFGDKIQTNDP---CKVLVCTKDSLQELTVSNCPS-----TCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAF-CVEKGCH 1467
            +C  +C  L+  +         + GC CP+GM  NN G C++ SEC CY N +    G  I  +D    C+  V    +  +LT+ NC        CK+   P       RTC   NI      + CK GC CP G V +     C+    CPCS+ ++ YE G   +  C +C C  IKG++ C +  C 
Sbjct:  666 TCNSSCRSLSARDRSCDIEDIPVDGCTCPDGMYQNNEGNCVQKSECDCYVNDEIVQPGKSILIDDNKCVCQDGVLHCQTPLDLTLQNCSRGAEYIDCKD---PKAQRRTERTCATRNIPDFEGDLPCKRGCYCPVGMVRNS-KGICIHPDDCPCSFGDREYEQGSVTSVGCNECTC--IKGSWNCTQNECQ 850
[Close]
BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Match: sp|Q9HC84|MUC5B_HUMAN (Mucin-5B OS=Homo sapiens OX=9606 GN=MUC5B PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 7.223e-10
Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1 
Query:  913 FVHVNCSCQQTCDLLAENN---GISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST-CKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            + +V  +CQ TC  L+E +    +S  P   + GC CP G  +N+ G C+   ECPCY +G   A G+ +  +D   V  CT   L  L  S   ST C   M+   C N         C R+C  + ++  C    C SGC CP G V S+    C+  + CPC +   TY+ G+    +C  C C
Sbjct:  701 YAYVVDACQPTCRGLSEADVTCSVSFVP---VDGCTCPAGTFLNDAGACVPAQECPCYAHGTVLAPGEVV--HDEGAVCSCTGGKLSCLGASLQKSTGCAAPMVYLDCSNSSAGTPGAECLRSC--HTLDVGCFSTHCVSGCVCPPGLV-SDGSGGCIAEEDCPCVHNEATYKPGETIRVDCNTCTC 879
[Close]
BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Match: sp|Q2PC93|SSPO_CHICK (SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 6.481e-9
Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = 1 
Query:  889 CGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSK---CIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST--CKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDE 1431
            CG  C    V+  CS  C +TC  L   +G S CPS    C+ GC CPEG ++++ G+C+    CPC  + + Y  G KI+    C   +CT  +    T + CP    C   ++     +C RTC+  + E N    G   GC CP G VF +  ++CV  + CPC +  + Y        +C  C C +
Sbjct:  805 CGTQCRGGQVYQECSSPCGRTCADL-RLDGASSCPSLDNICVSGCNCPEGPVLDDGGQCVPPGVCPCQHSSQLYPAGSKIRQG--CNACMCTAGTWS-CTDAPCPDAAFCPGDLV-YVFGSCLRTCD--SAEPNGTCTGIADGCVCPPGTVFLD--ERCVPPEECPCQHNGRLYHPNDTIVRDCNTCVCRQ 986
[Close]
BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Match: sp|P98088|MUC5A_HUMAN (Mucin-5AC OS=Homo sapiens OX=9606 GN=MUC5AC PE=1 SV=4)

HSP 1 Score: 63.1586 bits (152), Expect = 8.462e-9
Identity = 56/184 (30.43%), Postives = 83/184 (45.11%), Query Frame = 1 
Query:  919 HVNCSCQQTCDLLAENNGISKCPSKCIP--GCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN---------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCD 1428
            HV+ +CQ TC  L+E  G   C    IP  GC CP+G  +++ GKC++ S CPCY  G     G+ +  +D   +  CT   L  +        C   M+   C N         C ++C  + ++  C    C  GC CP+G V ++    C+  + CPC +   +Y  GQ     C  C CD
Sbjct:  713 HVS-TCQPTCRSLSE--GDITCSVGFIPVDGCICPKGTFLDDTGKCVQASNCPCYHRGSMIPNGESV--HDSGAICTCTHGKLSCIGGQAPAPVCAAPMVFFDCRNATPGDTGAGCQKSC--HTLDMTCYSPQCVPGCVCPDGLV-ADGEGGCITAEDCPCVHNEASYRAGQTIRVGCNTCTCD 888
[Close]
BLAST of Subcommissural organ spondin vs. TrEMBL
Match: A0A267EXG4 (VWFC domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig007621g1 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.173e-45
Identity = 112/320 (35.00%), Postives = 167/320 (52.19%), Query Frame = 1 
Query:  742 MIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCP--SKCIPGCQCPEGMVNNNGKCIKVSECPCYFN--GKTYAFGDKIQTNDPCKVLVCTKDSL-QEL-TVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKC-TMKDGESMIISSSTECPS 1680
            M   F  YQ+   ++ +K +    L+ ++  ++R  +     LN+ VYGC   C  P V  NC+C +TCD        ++CP  S C+PGC CPEGMV N GKCI  +ECPCY++   +    G+KI +   C  ++CT   L +E+ T  +    C   M    C++CH+TC    + A C L  CK GC CP+G    E   KCV +CPC      Y +G+ WT++C  C C   KGA C E GCH   CP  + M  ++   +  C        C+Y G ++ +  +W+DGPC++ +C     GE+ ++   TECP+
Sbjct:    1 MNDKFGEYQRIRLAM-LKADLIDTLAVRI-NIQRIRSDLAAGLNIRVYGCPPECKSPMVPTNCTCVKTCDK-------TECPTGSACLPGCTCPEGMVMNGGKCIARTECPCYYSVQSRVLKIGEKIPSAKNCTDVLCTASGLVREVNTERDGCHNCTGGMEWTPCKDCHKTCKHRKMSAAC-LATCKPGCACPKGTYMDEASGKCVPSCPCEMEGVKYPVGKKWTDKCRSCECTMEKGAVCKESGCHLSTCPSGYVM-KNDDPADGKCCECVPIKYCEYKGVKHPLDTVWSDGPCKSLECRRTSSGETRLVEKITECPA 309
[Close]
BLAST of Subcommissural organ spondin vs. TrEMBL
Match: A0A1I8FZV2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.697e-44
Identity = 123/363 (33.88%), Postives = 182/363 (50.14%), Query Frame = 1 
Query:  613 IQEYKINSIFTISISNDFYK*FESFLNVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCP--SKCIPGCQCPEGMVNNNGKCIKVSECPCYFN--GKTYAFGDKIQTNDPCKVLVCTKDSL-QEL-TVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKC-TMKDGESMIISSSTECPS 1680
            I  Y I S+ +I +S D          VF      S   + + M   F  YQ+   ++ +K +    L+ ++  ++R  +     LN+ VYGC   C  P V  NC+C +TCD        ++CP  S C+PGC CPEGMV N GKCI  +ECPCY+N   +    G+KI +   C  ++CT   L +E+ T  +    C   M    C++CH+TC    + A C L  CK GC CP+G    E   KCV +CPC      Y +G+ WT++C  C C   KGA C E GCH   CP  + M  ++   +  C        C+Y G ++ +  +W+DGPC++ +C     GE+ ++   TECP+
Sbjct:  565 ISPYNIRSV-SIDVSTDN--------RVFTPVKDASGAIRLWNMNDKFGEYQRIRLAM-LKADLIDTLAVRI-NIQRIRSDLATGLNIRVYGCPPECKSPMVPTNCTCVKTCDK-------TECPTGSACLPGCTCPEGMVMNGGKCIARTECPCYYNVQSRVLKIGEKIPSAKNCTDVLCTASGLVREVNTERDGCHNCTGGMEWTPCKDCHKTCKHRKMSAAC-LATCKPGCACPKGTYMDEASGKCVPSCPCEMEGVKYPVGKKWTDKCRSCECTMEKGAVCKESGCHLSTCPSGYVM-KNDDPADGKCCECVPIKYCEYKGVKHPLDTVWSDGPCKSLECRRTSSGETRLVEKITECPA 907
[Close]
BLAST of Subcommissural organ spondin vs. TrEMBL
Match: A0A267GUZ7 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig026350g1 PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.463e-43
Identity = 123/363 (33.88%), Postives = 182/363 (50.14%), Query Frame = 1 
Query:  613 IQEYKINSIFTISISNDFYK*FESFLNVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCP--SKCIPGCQCPEGMVNNNGKCIKVSECPCYFN--GKTYAFGDKIQTNDPCKVLVCTKDSL-QEL-TVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKC-TMKDGESMIISSSTECPS 1680
            I  Y I S+ +I +S D          VF      S   + + M   F  YQ+   ++ +K +    L+ ++  ++R  +     LN+ VYGC   C  P V  NC+C +TCD        ++CP  S C+PGC CPEGMV N GKCI  +ECPCY+N   +    G+KI +   C  ++CT   L +E+ T  +    C   M    C++CH+TC    + A C L  CK GC CP+G    E   KCV +CPC      Y +G+ WT++C  C C   KGA C E GCH   CP  + M  ++   +  C        C+Y G ++ +  +W+DGPC++ +C     GE+ ++   TECP+
Sbjct: 7408 ISPYNIRSV-SIDVSTDN--------RVFTPVKDASGAIRLWNMNDKFGEYQRIRLAM-LKADLIDTLAVRI-NIQRIRSDLATGLNIRVYGCPPECKSPMVPTNCTCVKTCDK-------TECPTGSACLPGCTCPEGMVMNGGKCIARTECPCYYNVQSRVLKIGEKIPSAKNCTDVLCTASGLVREVNTERDGCHNCTGGMEWTPCKDCHKTCKHRKMSAAC-LATCKPGCACPKGTYMDEASGKCVPSCPCEMEGVKYPVGKKWTDKCRSCECTMEKGAVCKESGCHLSTCPSGYVM-KNDDPADGKCCECVPIKYCEYKGVKHPLDTVWSDGPCKSLECRRTSSGETRLVEKITECPA 7750

HSP 2 Score: 65.0846 bits (157), Expect = 6.940e-7
Identity = 51/142 (35.92%), Postives = 70/142 (49.30%), Query Frame = 1 
Query:  976 SKCPSKCIPGCQCPEGMV--NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQ--ELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKS-GCCCPEGKVFSEILDKCVK--TCPCSYLNKTY 1380
            S C  +C+ GCQCP G       G C+  ++C C +NG +Y  G      D C    CT  + +   LT ++  +TC   M+   C +C R+C   NIE  C    CKS GC CP+G+V  +   KCV    CPC+   K Y
Sbjct:  927 SPCIEECVEGCQCPSGQALDEEKGTCVPRNQCKCVYNGVSYTNGQ--VRKDKCNNCTCTDGNWECTNLTCTDS-NTCPAGMVWSECSDCQRSCENINIE--CPKSSCKSGGCVCPKGQVLHQ--GKCVDKGNCPCAMAGKVY 1061
[Close]
BLAST of Subcommissural organ spondin vs. TrEMBL
Match: A0A267EXH0 (TIL domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig031569g1 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.228e-19
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 1 
Query: 1024 MVNNNGKCIKVSECPCYFN--GKTYAFGDKIQTNDPCKVLVCTKDSL-QEL-TVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVE 1455
            MV N GKCI  +ECPCY+N   +    G+KI +   C  ++CT   L +E+ T  +    C   M    C++CH+TC    + A C L  CK GC CP+G    E   KCV +CPC      Y +G+ WT++C  C C   KGA C E
Sbjct:    1 MVMNGGKCIARTECPCYYNVQSRVLKIGEKIPSAKNCTDVLCTASGLVREVNTERDGCHNCTGGMEWTPCKDCHKTCKHRKMSAAC-LATCKPGCACPKGTYMDEASGKCVPSCPCEMEGVKYPVGKKWTDKCRSCECTMEKGAVCKE 147
[Close]
BLAST of Subcommissural organ spondin vs. TrEMBL
Match: A0A0L8FMS3 (VWFC domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22013879mg PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.385e-16
Identity = 86/269 (31.97%), Postives = 120/269 (44.61%), Query Frame = 1 
Query:  901 CLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGD--KIQTNDPCKVL--VCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTN----ECLD--CRCDEI-----KGAFCVEKGCHFD----QCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESM 1650
            C  P     C   QTC+ LA NN  +    +C  GC CP  +V   G+CIK ++CPCY NGK Y   +   ++  D C ++  +CT D +       C +TC E  I   C  C+RTC  +N   +C +  C  GC CPE  +F +   KCV TC C+   K        T     +CLD   +C E+      G + +E     D    +C PR+K                     K +G  Y +GE+WNDGPC+  +C      SM
Sbjct:  827 CTLPKQFTTCVILQTCETLAYNNFTNTDEIECEEGCMCPPHLVQEKGECIKPTDCPCYHNGKFYKPNEIFVVERKDNCDLIQGICTSDGIHTWVNERCNTTCLEPFIWKKCA-CNRTCISHN--HSCNVETCSPGCACPENTLFQD--GKCVSTCNCTIDGKPVTDPVKPTLCTLCKCLDDVLKCGEVCDITCTGDYELENENLNDDICCRCIPRNK-----------------CEYPKRSGNFYEIGEVWNDGPCKTIECLSGRSLSM 1073
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Match: ENSAMXT00000019204.2 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001825.1:10421:34530:-1 gene:ENSAMXG00000018303.2 transcript:ENSAMXT00000019204.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 66.2402 bits (160), Expect = 1.077e-10
Identity = 63/193 (32.64%), Postives = 89/193 (46.11%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIP--GCQCPEGMVNN-NGKCIKVSECPCYFNGKTYAFGDKIQT-NDPCKVLVCTKDSLQ----ELTVSNCPS-----TCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGC 1464
             CQ+TCD L+       C +  +P  GC CP+G+  N NG C+ + +C CY NG+    G  I   N+ C   VCT   L     + +V +CP+      C E         C +TC +  ++  C L GC SGC CP G +  +    CV    CPC +    Y  G   T++C  C C + K   C E+ C
Sbjct:  613 GCQRTCDSLSLER--PACINTYLPVDGCACPDGLYENENGVCVALDKCSCYHNGERIKPGKSITIKNEHC---VCTNGKLHCHSWKPSVMDCPAPKVFFNCSEAGPEEHGLECAKTCAQKTVD--CFLTGCTSGCQCPSG-LLDDGRGHCVPQHNCPCKHNGHYYPPGSQITDQCNTCTCKQGKWK-CTEEKC 796
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Match: scospondin (subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1])

HSP 1 Score: 60.077 bits (144), Expect = 1.007e-8
Identity = 61/199 (30.65%), Postives = 91/199 (45.73%), Query Frame = 1 
Query:  859 QISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST--CKETMIPCTCENCHRTCNK-NNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIK 1437
            Q S   V   CG+ C       +C+  Q   +  EN G       C+PGCQCPEG M ++ G+C+ V  CPC   G  +  G  +Q N  C   VC K  +   +   CP    C  ++I  +  +C RTC+  ++ +A C       GC CPEG V   + D+CV    CPC +  + +      + +C  C C + +
Sbjct:  817 QCSGGQVYQECGRAC-----GGSCADLQQSWVCEENAG----SRTCVPGCQCPEGLMQDDQGQCVPVDMCPCVHGGAVHQPGSSVQIN--CNTCVCGK-GVWNCSDDPCPEVRECPGSLI-FSPGSCLRTCSSLDSPQALCTEP--IYGCVCPEGTVL--LGDQCVTPDECPCHHNGRLFFTNDTISKDCNTCVCKQRR 998
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Match: vwf (von Willebrand factor [Source:NCBI gene;Acc:103041546])

HSP 1 Score: 54.6842 bits (130), Expect = 4.273e-7
Identity = 54/191 (28.27%), Postives = 77/191 (40.31%), Query Frame = 1 
Query:  934 CQQTCDLLAENNGISKCPSKCIPGCQCPEGM-VNNNGKCIKVSECPCYFNGKTYAFGDKIQTND-----------------PCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCEN-------CHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRC 1425
            C QTC   +  +  S C S C  GC CP G+ + + G+C+   +C C+++G+ Y   D    +                  P  VL         L+      +C   +    CE+       C RTC   N++  C   GC SGC CP G V      +CV    CPC + N  Y  GQ+   +C  C C
Sbjct:  657 CNQTCRSRSLPD--SACRSMCEEGCFCPRGLYLTDTGECVPPDQCSCHYDGEIYQPNDMFADHHSICYCENGSMRCSSSELPASVLSDLFFDEPPLSRERRSVSCPAPLQQLRCESVRDVGIECARTCQ--NLDLECVSQGCISGCVCPPGTVRHR--RECVPPDQCPCFHNNHAYSPGQSIKIDCNTCVC 841
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Match: otog (otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1])

HSP 1 Score: 52.7582 bits (125), Expect = 1.533e-6
Identity = 34/102 (33.33%), Postives = 50/102 (49.02%), Query Frame = 1 
Query:  889 CGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTC 1194
            CG +   P V    +C +TC+    N   S     C+PGC CP G++ +  +C +   CPC + GK Y  GDK+ +   C + VC + + Q      CPS C
Sbjct:  770 CGNMVDGPSVSKGLACDRTCESYLLNLTCST-HEPCVPGCVCPTGLLKHGDECFEPVACPCLWKGKEYYPGDKVSST--CHLCVCQQGTFQ-CEFRPCPSMC 867

HSP 2 Score: 52.373 bits (124), Expect = 2.028e-6
Identity = 57/196 (29.08%), Postives = 80/196 (40.82%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMV--NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVL-----VCTKDSLQEL--TVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLM-GCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCP 1482
            SCQ+ C   +       C  +C  GC CP+G     +   C+K +ECPC F G  Y+ GD I T+    +      +C    + E    + + PS  K          C RTC    +   C     C  GC CP G +  +  D+C +   CPC +  K Y  G   ++ C  C C +  G F     C F  CP
Sbjct:  687 SCQRRCLSFSMPQ---SCGDECEEGCVCPQGTYYSTHTHSCVKRNECPCSFLGTDYSPGDVIMTSSGVHMFFLSDKLCPPGQIYEDCGNMVDGPSVSKGLA-------CDRTCESYLLNLTCSTHEPCVPGCVCPTGLL--KHGDECFEPVACPCLWKGKEYYPGDKVSSTCHLCVCQQ--GTF----QCEFRPCP 864
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Match: otogl (otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93])

HSP 1 Score: 52.373 bits (124), Expect = 1.989e-6
Identity = 57/214 (26.64%), Postives = 83/214 (38.79%), Query Frame = 1 
Query:  862 ISLNLVVYGCGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGK--CIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCP--STCKETMIPCTCEN------------CHRTCNKNNIEANCQLMG-CKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAF 1446
            I+    V  CG VCL   +++ C+  C +TC  ++       C   C  GC C EGM+ ++ +  C+ +S+C CYF G  +          P +V    K SL  +   + P    C    +   C              C  TC    +   C  M  C  GC CP G V         + CPC++L   Y  G+     C  C C   +G F
Sbjct:  623 INFRAHVSECGMVCLGGMMYLPCTSTCGKTCHSVSLGE---VCDGDCAEGCGCMEGMLYDHARQRCVPLSQCHCYFMGSVF---------QPGEVSFIHKHSLSPVLFPSEPERGDCPNGKVYYNCRGQLGAGPTGVGVACELTCRNLMLNLTCPPMTPCVPGCGCPAGLVGHNGDCYYPENCPCAWLGLEYLPGETVDTPCYRCVCH--RGFF 822

HSP 2 Score: 51.9878 bits (123), Expect = 2.298e-6
Identity = 28/77 (36.36%), Postives = 40/77 (51.95%), Query Frame = 1 
Query:  889 CGKVCLPPFVHVNCS--CQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQ 1113
            C   C   FVH +C   C  TC    E  G +     C+ GC CP+G++  NG CI V++CPC ++G  Y  G  ++
Sbjct:  286 CADECEDSFVHRDCISCCPPTCTFEKECLGTNL---HCLDGCYCPDGLILQNGTCIPVAQCPCVYHGTAYPLGHVLE 359
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003779.1 (pep scaffold:Pmarinus_7.0:GL476420:804041:810987:1 gene:ENSPMAG00000003452.1 transcript:ENSPMAT00000003779.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.299 bits (129), Expect = 2.336e-8
Identity = 68/253 (26.88%), Postives = 102/253 (40.32%), Query Frame = 1 
Query: 1330 LDKCVKTCPCSYLNKTYEIGQNWTNE-CLDCRC--DEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIW--NDGPCRNFKCTMKDGESMIISSSTECPSI--KCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVS--NLT-IVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTIS-TVEVEYKCPGNLSKSISTQVISACNC 2055
            +  CV    C+Y    Y+ G  W +  C DC C      G    E  C    CP      +  P +  CC           +G  Y VG+IW  +   C   +C +  G + +  + T+CP +   C L        G CC+ C                  P S  ++VS  N T  +  + C+SR+ V+V  CEG C SR+ +          + C CC  T + TVEVE  CP   ++    ++++AC C
Sbjct:   10 IRTCVSDEFCTYDGIQYQFGDTWKDGLCTDCSCVMASEGGPSKYEVLCQHTSCPNCLPGESYIPVEGQCCGTCVRTSCVADDGTTYEVGQIWSLDTKGCSRCECVLAGGYAYVQCAVTQCPPVDPSCPLDLISYSANG-CCQFC--------------NRGSPRSGGRRVSRCNATPWMSADGCLSRDSVNVTGCEGACSSRSVLDAATNVYT--KQCSCCSATETVTVEVEMVCPDGSARIDRFEMVAACKC 245
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008652.1 (pep scaffold:Pmarinus_7.0:GL477625:577100:586386:1 gene:ENSPMAG00000007836.1 transcript:ENSPMAT00000008652.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.6842 bits (130), Expect = 5.784e-8
Identity = 58/196 (29.59%), Postives = 90/196 (45.92%), Query Frame = 1 
Query:  877 VVYGCGKVCLPPFVHVNC--SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMV--NNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNC---PSTCKETMIPCTCEN-CHRTC-NKNNIE-ANCQLMGCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRCD 1428
            ++  C   C    V+  C  SC+ TC  L+    I  C  +C  GC CP+G++   +   C+  S+C C ++   YA G  +Q    CK   C        +   C      C E M    C++ C  TC N NN   ++C    C +GC C  G V+     KCV+   CPC +  ++++ GQ+ T +C +C C+
Sbjct:  160 LLLDCTVTCPGDMVYQQCASSCRSTCASLSN---IEDCHEECAEGCNCPDGLLLDFDGLSCVDQSQCKCSYSSTNYAPGSILQMG--CKNCTCEYGGWSCWSSEGCVDDSGLCPENMQWSPCKSSCPVTCGNMNNPSLSSCITETCDAGCECSTGLVWDG--SKCVQPANCPCYHGGQSFQTGQSITLDCNNCVCN 348
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008773.1 (pep scaffold:Pmarinus_7.0:GL476328:703641:749596:1 gene:ENSPMAG00000007891.1 transcript:ENSPMAT00000008773.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 53.5286 bits (127), Expect = 1.726e-7
Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 1 
Query:  934 CQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGK-CIKVSECPCYFNGKTYAFGDKIQTND---PCKVLVCTKDSLQELTVSNCPS-----TCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRC 1425
            C  TC +L E           + GC CP+G  ++ G  C+   ECPCY+ G     G+ +Q       C+       + Q  T   CP       C ++        CH+TC+       C    C SGC CP+G V+S+    C++   CPC +  +    G++   +C  C C
Sbjct:  634 CVNTCRVLQETGSQCFSSGVAVDGCTCPKGTYDSGGGFCMAPEECPCYYRGNVLPLGNSVQQGKYICECRAGTMLCMNPQGPTPQPCPHPMVYFNCNQSTANGNSFPCHQTCSLQ----ECYNPECNSGCVCPKGLVYSDD-GTCIQPEACPCEHNGQKTAPGESIEVDCNTCTC 803
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Sea Lamprey
Match: tecta (tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120])

HSP 1 Score: 50.0618 bits (118), Expect = 2.099e-6
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCK 1131
            +CQ++C  LA+    S+ P  C  GC+C  G V  +G+C+ ++EC C+  G+ YA G+     + C+
Sbjct:  991 TCQRSCSDLAQPTICSRGP--CAEGCRCNPGTVWRSGRCVPLAECGCFHGGRNYASGEAFWPEELCR 1055
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Nematostella
Match: EDO41876 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S312])

HSP 1 Score: 58.5362 bits (140), Expect = 4.752e-9
Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:  826 LLFMKRFETSRQISLNLVV-YGCGKVCLPPFVHVNC--SCQQTCDLLAENNGIS-KCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTN 1119
            L    R   SR+I L+    + C K C+ P V+  C  +C +TCD     +G+   C   CI GC CPEG V  + +C+ V++CPC  NG TY  G  I+  
Sbjct:  255 LTEYSRACASREIMLDWRSQHLCPKQCIQPKVYSECGPACVKTCDA----DGLQPTCHETCIDGCHCPEGTVQTDNRCLPVNQCPCQHNGITYVTGTTIRVG 352
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Nematostella
Match: EDO44199 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWN6])

HSP 1 Score: 56.225 bits (134), Expect = 4.542e-8
Identity = 58/177 (32.77%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:  934 CQQTCDLLAENNGISKCPSK-CIPGCQCP-EG-MVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMI-----PCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKT--CPCSYLNKTYEIGQNWTNEC-LDCRCDE 1431
            C  TCD LA  N    CPS+ C+ GC C  EG ++NN  KC+  ++CPCY+    Y +G+  +  D C    C K  + + T  +C + C    +       TCEN H          N     C SGC CP+G +  +    CV++  C C + NK Y+ G     +C   CR D 
Sbjct: 1140 CPSTCDDLA--NVTDTCPSRRCVEGCYCEKEGELMNNEHKCVDKTQCPCYYGDTMYKYGEIRK--DRCNNCTC-KGGVFDCTNVDCEAMCLTRGLVYSDCGITCENLH--------PINGGERPCVSGCYCPDGLIMHDN-GTCVQSMQCQCKHNNKYYDAGAISPTDCSRKCRGDR 1302
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Medaka
Match: scospondin (SCO-spondin [Source:NCBI gene;Acc:101172449])

HSP 1 Score: 60.8474 bits (146), Expect = 5.046e-9
Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 1 
Query:  994 CIPGCQCPEGMVNNN-GKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSL---QEL--TVSNCPSTC----KETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCV--KTCPCSYLNKTYEIGQNWTNECLDCRCDEIK 1437
            C+PGCQCP G+V ++ G+C+ VS CPC  + K Y+ G  +Q N  C   VC   +    QE   +V  CP +     +  M+ C+  + H+   +++           SGC CP+G  F    D+CV    CPC +  + Y   +  T +C  C C + +
Sbjct:  690 CVPGCQCPTGLVQDHLGQCVPVSLCPCVQDDKIYSPGTILQNN--CNTCVCKHGAFNCTQEHCKSVQQCPGSLVYSPRSCMLTCSSLD-HQGQQQSSSVTKPSCREPLSGCVCPQGTFFHG--DRCVLPDECPCHHNGQVYYTNETITKDCNTCVCQKRR 844

HSP 2 Score: 50.447 bits (119), Expect = 7.165e-6
Identity = 32/96 (33.33%), Postives = 46/96 (47.92%), Query Frame = 1 
Query:  889 CGKVCLPPFVHVNC--SCQQTC---DLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQ 1161
            CG+VC    V  +C  SC  +C           +++C  +C+ GC+CP G+  + G C+K  +CPC+    TY  GD IQ    C   VC     Q
Sbjct:  330 CGRVCPRGQVFSDCVSSCPPSCASPHPPGPAATMAQCREECVGGCECPPGLFLHQGTCLKAEDCPCFHRRLTYQPGDSIQQR--CNTCVCRSGQWQ 423
[Close]
BLAST of Subcommissural organ spondin vs. Ensembl Medaka
Match: otog (otogelin [Source:NCBI gene;Acc:101158818])

HSP 1 Score: 58.151 bits (139), Expect = 3.727e-8
Identity = 60/199 (30.15%), Postives = 82/199 (41.21%), Query Frame = 1 
Query:  931 SCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNN--GKCIKVSECPCYFNGKTYAFGD--KIQTNDPCKVLVCTKDSLQELTVSNCP--------STCKETMIPCTCENCHRTCNKNNIEANCQLM-GCKSGCCCPEGKVFSEILDKCVK--TCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCP 1482
            SCQ+ C  LA    + +C  +C  GC CP+G   N+    C+  S+CPC   G  Y  GD     +      L C+  S   L    CP        S   +  +P     C RTC  + +   C     C SGC CP G +  +  D+C +   CPC +  K Y  G   ++ C  C C +  G F     C F  CP
Sbjct:  784 SCQRRCSSLA---ALQRCGEECEEGCACPQGSFYNHRTHTCVHRSQCPCSLFGADYEPGDLPAQLSWSLTGFLKCSGFSF-FLPERLCPAGQLYQNCSDGDDAFLPGRGVACERTCESHLLNIPCSSHDSCVSGCVCPHGLL--KHGDECFEPAACPCLWKGKEYFPGDRVSSPCYQCACQD--GTF----QCAFRPCP 970
[Close]
BLAST of Subcommissural organ spondin vs. Planmine SMEST
Match: SMESG000025545.1 (SMESG000025545.1)

HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0
Identity = 455/459 (99.13%), Postives = 456/459 (99.35%), Query Frame = 1 
Query:  691 NVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 2067
            NV   +IFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS
Sbjct: 6862 NVLEMNIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 7320
[Close]
BLAST of Subcommissural organ spondin vs. Planmine SMEST
Match: SMESG000025545.1 (SMESG000025545.1)

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 455/459 (99.13%), Postives = 456/459 (99.35%), Query Frame = 1 
Query:  691 NVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 2067
            NV   +IFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS
Sbjct: 6883 NVLEMNIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 7341
[Close]
BLAST of Subcommissural organ spondin vs. Planmine SMEST
Match: SMESG000025545.1 (SMESG000025545.1)

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 455/459 (99.13%), Postives = 456/459 (99.35%), Query Frame = 1 
Query:  691 NVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 2067
            NV   +IFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS
Sbjct: 6883 NVLEMNIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 7341
[Close]
BLAST of Subcommissural organ spondin vs. Planmine SMEST
Match: SMESG000025545.1 (SMESG000025545.1)

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 455/459 (99.13%), Postives = 456/459 (99.35%), Query Frame = 1 
Query:  691 NVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 2067
            NV   +IFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS
Sbjct: 6881 NVLEMNIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 7339
[Close]
BLAST of Subcommissural organ spondin vs. Planmine SMEST
Match: SMESG000025545.1 (SMESG000025545.1)

HSP 1 Score: 869.766 bits (2246), Expect = 0.000e+0
Identity = 455/459 (99.13%), Postives = 456/459 (99.35%), Query Frame = 1 
Query:  691 NVFNFSIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMXXXXXXXXXXXXXXXXXXXXXYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNXXXXXXXXXXXSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 2067
            NV   +IFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS
Sbjct: 6903 NVLEMNIFTSDDGKTYRMIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGCGKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNGKCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPSTCKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKCVKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRHKMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDGESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSPQPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQIRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS 7361
The following BLAST results are available for this feature:
BLAST of Subcommissural organ spondin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
MUC61.705e-1138.20mucin 6, oligomeric mucus/gel-forming [Source:HGNC... [more]
MUC64.599e-1138.20mucin 6, oligomeric mucus/gel-forming [Source:HGNC... [more]
MUC5B1.504e-1032.62mucin 5B, oligomeric mucus/gel-forming [Source:HGN... [more]
MUC5AC1.762e-930.43mucin 5AC, oligomeric mucus/gel-forming [Source:HG... [more]
MUC5AC1.762e-930.43mucin 5AC, oligomeric mucus/gel-forming [Source:HG... [more]
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BLAST of Subcommissural organ spondin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Subcommissural organ spondin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Subcommissural organ spondin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
vwf1.514e-828.57von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-07... [more]
vwf1.539e-828.57von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-07... [more]
muc5.32.609e-831.64mucin 5.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1562][more]
scospondin1.074e-731.61subcommissural organ spondin [Source:ZFIN;Acc:ZDB-... [more]
otogl1.111e-736.54otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93][more]
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BLAST of Subcommissural organ spondin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000018702.17.324e-1130.05mucin-2-like [Source:NCBI gene;Acc:100495470][more]
ENSXETT00000006505.17.209e-1033.15SCO-spondin [Source:NCBI gene;Acc:100497129][more]
ENSXETT00000033057.11.761e-929.84mucin-2-like [Source:NCBI gene;Acc:100495470][more]
ENSXETT00000033131.12.207e-928.95mucin-2-like [Source:NCBI gene;Acc:100495470][more]
ENSXETT00000018772.12.230e-929.08mucin-2-like [Source:NCBI gene;Acc:100495470][more]
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BLAST of Subcommissural organ spondin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Muc5ac1.685e-1030.00mucin 5, subtypes A and C, tracheobronchial/gastri... [more]
Muc5ac1.685e-1030.00mucin 5, subtypes A and C, tracheobronchial/gastri... [more]
Muc5ac2.093e-1030.00mucin 5, subtypes A and C, tracheobronchial/gastri... [more]
Muc5b4.332e-1032.07mucin 5, subtype B, tracheobronchial [Source:MGI S... [more]
Muc193.863e-933.54mucin 19 [Source:MGI Symbol;Acc:MGI:2676278][more]
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BLAST of Subcommissural organ spondin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q7Z5P9|MUC19_HUMAN2.485e-1531.05Mucin-19 OS=Homo sapiens OX=9606 GN=MUC19 PE=1 SV=... [more]
sp|Q6PZE0|MUC19_MOUSE3.551e-1231.41Mucin-19 OS=Mus musculus OX=10090 GN=Muc19 PE=2 SV... [more]
sp|Q9HC84|MUC5B_HUMAN7.223e-1032.62Mucin-5B OS=Homo sapiens OX=9606 GN=MUC5B PE=1 SV=... [more]
sp|Q2PC93|SSPO_CHICK6.481e-931.94SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 ... [more]
sp|P98088|MUC5A_HUMAN8.462e-930.43Mucin-5AC OS=Homo sapiens OX=9606 GN=MUC5AC PE=1 S... [more]
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BLAST of Subcommissural organ spondin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A267EXG45.173e-4535.00VWFC domain-containing protein OS=Macrostomum lign... [more]
A0A1I8FZV26.697e-4433.88Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267GUZ74.463e-4333.88Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267EXH02.228e-1939.19TIL domain-containing protein OS=Macrostomum ligna... [more]
A0A0L8FMS32.385e-1631.97VWFC domain-containing protein OS=Octopus bimaculo... [more]
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BLAST of Subcommissural organ spondin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000019204.21.077e-1032.64pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
scospondin1.007e-830.65subcommissural organ spondin [Source:ZFIN;Acc:ZDB-... [more]
vwf4.273e-728.27von Willebrand factor [Source:NCBI gene;Acc:103041... [more]
otog1.533e-633.33otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1][more]
otogl1.989e-626.64otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93][more]
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BLAST of Subcommissural organ spondin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ENSPMAT00000003779.12.336e-826.88pep scaffold:Pmarinus_7.0:GL476420:804041:810987:1... [more]
ENSPMAT00000008652.15.784e-829.59pep scaffold:Pmarinus_7.0:GL477625:577100:586386:1... [more]
ENSPMAT00000008773.11.726e-727.43pep scaffold:Pmarinus_7.0:GL476328:703641:749596:1... [more]
tecta2.099e-634.33tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-12... [more]
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BLAST of Subcommissural organ spondin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Subcommissural organ spondin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO418764.752e-937.25Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO441994.542e-832.77Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Subcommissural organ spondin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
scospondin5.046e-931.25SCO-spondin [Source:NCBI gene;Acc:101172449][more]
otog3.727e-830.15otogelin [Source:NCBI gene;Acc:101158818][more]
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BLAST of Subcommissural organ spondin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000025545.10.000e+099.13SMESG000025545.1[more]
SMESG000025545.10.000e+099.13SMESG000025545.1[more]
SMESG000025545.10.000e+099.13SMESG000025545.1[more]
SMESG000025545.10.000e+099.13SMESG000025545.1[more]
SMESG000025545.10.000e+099.13SMESG000025545.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30021305 ID=SMED30021305|Name=Subcommissural organ spondin|organism=Schmidtea mediterranea sexual|type=transcript|length=2135bp
CATTTTTTATCAAAAATCTAGGATAAATTTATTTATTAATGAATCCTTTG
CAATACTTAGAATTTCAAAAATTGTTGAAAGTAGATGATTTTTTATTAAA
TTCAATTTACTAAAGGAAAGTTCCGCACTCACAAAGTACAATAACCGTAT
CAATTACAACATTGAAGACGTTATATCTGAATTCTTCGACGGGATTTGTT
GTTATTTCATCTTTTGGCAATTTAAAATATCATCTTTCCTTTCTTTTGAT
TTGTCTCCTAGGGAAACTCTCTGAATACTCAATTCAAATTTATTGTTGTA
TCCTTATTAAAACAATTGTTGTTGACTCAATGCACCAATCACGTATCTCT
AATATTTACTAGACTTTCCTTGATCCACCTGATTCCAATGATGGAACGGT
ACTGTCTTGATATATATAATACATAAATGGAGATACAACCAGATTAATTT
TGACATTTCCAATGATGCCAATTGATGCTAGCAGATTCCATGGTAAATGA
ATCGCTTTGGACTGTGTACTTAACCAAAATTGCACAATACCAATTCTTAT
GATAAATTAGAGATATTTTTTATTTTTAACCTTGACAGCAATCTCTAGGT
CCCTGCGCTCACATTCAGGAATATAAAATAAATAGCATTTTCACTATTTC
TATATCTAATGACTTTTACAAATAATTTGAATCATTTCTCAATGTTTTCA
ATTTTAGTATTTTCACGAGTGACGATGGAAAAACCTACAGAATGATCAAA
ACGTTTGACGGTTATCAAAAGAATAATGCTTCTGTTTCAATAAAATTCGA
GAAAACATCTATTTTAAGTTTTAAATTACTTTTTATGAAGAGATTCGAAA
CTTCTAGACAGATTTCTTTGAACTTGGTAGTATATGGTTGTGGCAAAGTT
TGTCTTCCACCGTTTGTCCATGTCAATTGCTCATGTCAACAGACTTGTGA
TCTGTTAGCCGAAAACAACGGTATTTCGAAGTGCCCTTCAAAATGTATTC
CTGGCTGTCAGTGTCCTGAAGGAATGGTAAATAACAATGGAAAATGCATC
AAAGTATCGGAATGTCCGTGCTATTTCAATGGGAAAACTTATGCCTTTGG
AGACAAAATTCAGACTAATGATCCATGCAAAGTTCTAGTATGCACTAAGG
ATAGTCTTCAGGAATTAACTGTTAGCAATTGTCCATCAACATGCAAGGAA
ACTATGATCCCATGCACTTGTGAAAATTGCCATAGAACGTGCAATAAGAA
CAATATTGAAGCCAACTGTCAACTTATGGGTTGCAAATCTGGTTGTTGCT
GTCCAGAGGGAAAGGTGTTCTCAGAAATACTCGACAAATGTGTCAAAACA
TGCCCATGTAGTTACCTGAATAAAACATATGAAATTGGACAGAACTGGAC
GAATGAATGTCTTGATTGTCGATGTGATGAAATTAAAGGAGCATTTTGTG
TAGAGAAAGGATGTCATTTCGATCAGTGTCCTCCGCGTCATAAAATGGTC
AATGATAATCCGAATGATAACGTCTGCTGTAAATGTGTCAAAGTCGATCC
TGTTTGTAAGTATAACGGAAAGGAATATTCAGTGGGAGAAATCTGGAATG
ATGGTCCTTGCAGAAATTTTAAATGCACTATGAAAGACGGTGAATCAATG
ATCATTTCAAGCAGCACTGAATGTCCATCTATTAAATGTCTATTAACGCA
TACGCTTATGAGAGTACCTGGTGAATGTTGCGAAAAATGCGTACCGAACA
ACGTTACTACTACAACTGTACGGATAACAACTACCTCGCCTCAACCCCCT
AGTAAGTGTCAGAAGGTCAGCAACTTAACCATTGTAGAACAAGAGACTTG
CGTGTCTAGAAATCCAGTGGATGTCGGATCATGTGAAGGGATGTGTAAAA
GCCGCACTGAAATCAGTTATGTTAATGGGAAATTGAATCAAATCCGAGAT
TGCAAATGCTGCTTCCCAACCATTTCTACTGTTGAGGTCGAGTACAAATG
CCCAGGCAATCTCTCAAAATCCATTTCTACCCAAGTAATATCTGCATGCA
ATTGTGCACAATGTTCCTGATTCAGATCAGATTTTAATATGAAATTTTAA
CTATTTTATTAAATACATATGATGGCTTAAAAAAA
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protein sequence of SMED30021305-orf-1

>SMED30021305-orf-1 ID=SMED30021305-orf-1|Name=SMED30021305-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=443bp
MIKTFDGYQKNNASVSIKFEKTSILSFKLLFMKRFETSRQISLNLVVYGC
GKVCLPPFVHVNCSCQQTCDLLAENNGISKCPSKCIPGCQCPEGMVNNNG
KCIKVSECPCYFNGKTYAFGDKIQTNDPCKVLVCTKDSLQELTVSNCPST
CKETMIPCTCENCHRTCNKNNIEANCQLMGCKSGCCCPEGKVFSEILDKC
VKTCPCSYLNKTYEIGQNWTNECLDCRCDEIKGAFCVEKGCHFDQCPPRH
KMVNDNPNDNVCCKCVKVDPVCKYNGKEYSVGEIWNDGPCRNFKCTMKDG
ESMIISSSTECPSIKCLLTHTLMRVPGECCEKCVPNNVTTTTVRITTTSP
QPPSKCQKVSNLTIVEQETCVSRNPVDVGSCEGMCKSRTEISYVNGKLNQ
IRDCKCCFPTISTVEVEYKCPGNLSKSISTQVISACNCAQCS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0007399nervous system development
GO:0030154cell differentiation
GO:0010466negative regulation of peptidase activity
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000418head
PLANA:0000420parapharyngeal region
Vocabulary: INTERPRO
TermDefinition
IPR036084Ser_inhib-like_sf
IPR001007VWF_dom
IPR006207Cys_knot_C
IPR002919TIL_dom
IPR008979Galactose-bd-like_sf
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0030414peptidase inhibitor activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006207Cystine knot, C-terminalSMARTSM00041CT_3coord: 358..442
e-value: 5.7E-4
score: 24.0
IPR006207Cystine knot, C-terminalPROSITEPS01225CTCK_2coord: 356..442
score: 10.022
IPR001007VWFC domainSMARTSM00214vwccoord: 272..333
e-value: 2.6E-8
score: 43.6
coord: 206..265
e-value: 5.2
score: 0.8
IPR001007VWFC domainPROSITEPS50184VWFC_2coord: 270..334
score: 9.989
IPR002919Trypsin Inhibitor-like, cysteine rich domainPFAMPF01826TILcoord: 59..108
e-value: 1.5E-6
score: 28.3
NoneNo IPR availableGENE3DG3DSA:2.10.25.10coord: 47..140
e-value: 1.8E-13
score: 52.7
coord: 141..242
e-value: 4.4E-8
score: 35.4
NoneNo IPR availablePANTHERPTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDcoord: 64..229
NoneNo IPR availableSUPERFAMILYSSF57603FnI-like domaincoord: 264..335
IPR036084Serine protease inhibitor-like superfamilySUPERFAMILYSSF57567Serine protease inhibitorscoord: 50..110