TIR domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30021281 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 24Note: Hover over icons to view figure legend
Homology
BLAST of TIR domain-containing protein vs. TrEMBL
Match: A0A210QF19 (Vacuolar protein 8 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT22612 PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.089e-58 Identity = 153/585 (26.15%), Postives = 299/585 (51.11%), Query Frame = 3 Query: 168 FEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLE--FQLDDERLDA--LLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDETKE----FVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNE-DKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRK-GNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSI------------NEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNL 1856 +E +++ E++K+L + + + L+ + Y+ + H KI E E LK + F+ D A L +L NF+DAS+ A + S+ ++F C + +T+ + V+ + +I N+AR+ +K N+ + +++F++ E + L + +ML LS+I+++ E + L++ + ++ G + I K +R+ ++ ELM GL +++ N+ K+KI + G +P+ + +L + E +T I+ L F++E+ QK+++ ++ S++ + ++K +G ++ ++G+N++ ++ KK++ VF+SY+ K V++I LK + +WID E+M GS L AMA +EN+ ++ +S Y++SPNCR EAEY +Q +K IP+++ +++P+GWLG I G K+Y++ S + E+ L L+ G+G S PG + + S + +T + +WL KL L DGKLL + ++ ++P+++ +L+K+ M +E+L F AL+ L Sbjct: 131 LKESEVLVRTKEIVKVLA-GLDTYENGLGMKLVKSLGDTYWGYRPHRKKIGDSMAEAGFGEVAMKMLKSLNAKGIFKTDSIWFPAYYTLNTLWNFTDASLRLAKTVAESDGVRFFTVNCSHEPFLTNLDNKNVYYIVKSSMSIIHNIARNPDVIHFFKENKTTDVMLKFVRSYEEHEMLKIMAMLTLSHIVEEEENDKLMDDTGSIEGTIKYIDKAIEDERRRYRGFTPQELMDGLGKLAVNDNNKKKIVEAGALPVFMKMLKSDSAEEQTVTARAIWTLSFDKEVSQKIVEHPDMMTSLEKLRESSDSDVRKNVNGALFVLKGENDVSRRPRSGKKNKGHVFISYSWNEKEIVLKIRERLKAEGVEVWIDIERMGGSTLTAMAEAVENAAVVLLCMSEKYKQSPNCRLEAEYTFQLRKDYIPLMMQKKYRPDGWLGAILGAKLYFDFSGKYPFEKPWNGLQKELR-GIGR-----LSTPSATPGKDVTDGPIMATSACTAASSPGSLSTSSHAHKMTTEDVGNWLCQVKLDGCVPSLAQFDGKLLVQLQRMKVEAPEFYYASLEKKLNMNLVEILTFTEALDKL 708
BLAST of TIR domain-containing protein vs. TrEMBL
Match: W4XMC6 (TIR domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.539e-52 Identity = 125/453 (27.59%), Postives = 246/453 (54.30%), Query Frame = 3 Query: 570 VISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVE-GSNTVNGILMLIKKTA-SFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEI----------RGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIK-----------NWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGM-KFMEVLKFHNALNNL 1856 ++ N+A+ GN+ Y+ ++ ES+ F++ + L SM+ L+YI+++ + +L E G+NT+ ++ ++K S +KR S+ E+ L R++ ++ K KI + GG+P++I +LH + E + ++NL F+ ++ +KL + +++ + + K +G +W I + + + + + +SY + V+++ + L K IW+D + M GS L+AMA IEN+ ++ +S Y++SPNCR+EAEYA+Q +K IIP+++ ++P+GWLG I G K Y + S R ++EE M L+ ++ + K + TD+ + SI+ ++ +WS ++ WL +++L HL+ + + +GKLL + +R ++PD+F ++K++FG+ K +++L+F AL++L Sbjct: 41 ILHNLAKAPGNKHVYREEKVVESMEPFLE--GDPYLKAVSMMTLAYIVEEGQEEILAEKGTNTIEYLVEILKDAQNSKDKRCQGLSVEEVTAALGRLAVHDNNKYKIVEAGGLPLMISMLHDESVETQEASAHAVWNLAFSDDVSEKLRSNTDCMMALQDLSTSSSSEVAKAANGALWVINKEGEKKDLVKENEDDTGLGHSLSRKQPHIMLSYQWGCQPLVLKMRDVLAKAGYNIWVDVDCMYGSTLQAMAEAIENACAIVMCMSERYKESPNCRTEAEYAFQLRKRIIPVMMEEYYQPDGWLGIILGAKFYMDFSGRLDIEEEMNKLLKEVQMHSAEAKIIYKDD--------TDDGVLVGASISFPLESAGISIKMESLDWSASQVQDWLIENELEHLRPLMAEYNGKLLNQLYKMRQEAPDFFYLSIKEDFGLKKLIDILRFTEALDSL 483
BLAST of TIR domain-containing protein vs. TrEMBL
Match: W4XJB9 (TIR domain-containing protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.197e-50 Identity = 148/581 (25.47%), Postives = 296/581 (50.95%), Query Frame = 3 Query: 174 EPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHF----LLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIE--KKVITDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEG-SNTVNGILMLIKKTA-SFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFE----IENSIKLYENHVNPVIKKYHDGIMWEI-RGXXXXXXXXXXXXXXXFD------VFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGM-KFMEVLKFHNALNNL 1856 E I+ + +++ +L+ + A L ++ AY+ + + K CQ F + + E L L F L + + E + L N S+AS+ + ++ ++K ++ K+ + +R + ++ N++ GN+ ++ + E + ++K + L M+ L+YII++ + + L+E ++T+ ++ +++ S NKR E+ L L R++ ++ K KI + GG+P+++ +L K + E TI+NL F+++ +QK+ + + +E+ + E+HV K G +W I +G+ + +KE +++ + + + +SY ++ V+ I + LK ++W+D + M GS L+AMA +E S ++ IS Y++SPNCR+EAEY ++ K IIP+++ ++P+GWLG I G K+Y + S + + E M+ L+ ++T D G+ K KE T + N ++ +WS + WL +S L + L + DG L+ + +R ++P++F +++ + G+ K E+ KF AL + Sbjct: 2 ESNQIDKMRDILDVLKKTDTSWASSEAALLCEQMDAAYWKSPDKI-KFCQEFCDYDGAELLVSALIKFEEDGLFKVKGAWETAFVIYNHLCNLSEASLVLSIQMGEKGMVKLCSSNIVKYRGKMSIRDILSLIRVSLGILCNMSTTPGNRHLFREEGVAEKMQPYLK--GDPFLKTICMITLAYIIEEGQEDSLIEKETDTIEYLVGILRDAVKSPNKRFQGLCDREIALALGRLAVHDSSKCKILKAGGLPLLVKMLEDKSADTQEAAANTIWNLAFSEDGRQKIAENKDCLKLLESLTQCSESHVADAAK----GALWVITQGQAKQVEKEVEAEGMQGEEKSYSHIMISYQWGSQPVVLTIRDALKAAGYQVWLDVDHMHGSTLQAMAEAVEKSYVVLMCISEGYKESPNCRTEAEYTFKLGKCIIPVMMEEYYQPDGWLGIILGSKLYMDFSGKLDQTEEMKKLLREVQTNHADAGDTVKRAEVKEVKLLTQLSTQPNTP--SQVLSWSNEQVQDWLKNSGLDKWRPSLQEYDGTFLFNLHKLRLEAPEFFYSSIQDDQGLQKLREIFKFTAALETV 573
BLAST of TIR domain-containing protein vs. TrEMBL
Match: A0A2B4RLI9 (U-box domain-containing protein 4 OS=Stylophora pistillata OX=50429 GN=PUB4 PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.564e-49 Identity = 144/510 (28.24%), Postives = 272/510 (53.33%), Query Frame = 3 Query: 417 LLKSLMNFSDASVEFAHKIYCSEI--------------------LKFLIDQCIEKKVITDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFN-KRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILH-AKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXX--XXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLND-----LDGKLLYVMLDIRSKSPDYFNKTLKKEFGM-KFMEVLKFHNALNNL 1856 L +L+N+SD EF + C+E+ +K++ + K T K R I + N+++ + + ++ + + SL+ + + +S+L+L+Y+I + +L++ + +N ++ L++K + R +S E+ GL +I+ N+ K+ I + G IPI++++L AK + E T++ L F++E K+ + ++ ++ N +KK G +WEI GK + K++S K V +SY + V++I N+L+ ++W+D ++M GS LE+MAR +EN+ ++ +S Y++SPNCRSEAEY YQ K IIP+++ +++P+GWLGFI G K + + SE+ ++ ++ LV L G +GK E +E V + S I++W++++ +WL D +G LK RL+ L+G++L + D+R +SP++F +++ +F + +VL+F +AL+ L Sbjct: 238 FLGTLLNYSDLHDEFC--LECNEVGMVQLFVEMSKKLQDSIPHNVKYVEPKTQRLKKFTVRGKMLSRSLGI-LHNLSKRVPTRTNFASAQAVNSLLLPLLKAEITFYSAKSLLVLAYLIDEQNNHLIMADAEPINFLIRLLRKAIGTDYHRYLGFSAREIAEGLTQIAVNDNNKKTIVKCGAIPILVNMLQNAKDDEERVNACNTLWTLAFDEENKKNIKEDEHACAELRKLLTSNNREVKKAAAGALWEIEGKEKHAEDKQQSVKKSDAKHVMISYQWDVQKLVIQIKNKLQSDGFKVWMDIDEMGGSTLESMARAVENASVVLVCVSQKYKESPNCRSEAEYTYQLHKDIIPLMMDGKYRPDGWLGFIVGSKFWIDFSEKHKLDSNVDKLVKEL-------GTRGKIE-LQENAMKATVMDVVDASPQSTIRSWTSSDVKAWLMD--VG-LKDRLDSNTLKRLNGQILLRLQDLRKESPEFFYSSVRTDFKLGTVFDVLEFVDALDKL 733
BLAST of TIR domain-containing protein vs. TrEMBL
Match: A0A0L8HV44 (TIR domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22006151mg PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.029e-48 Identity = 128/504 (25.40%), Postives = 261/504 (51.79%), Query Frame = 3 Query: 426 SLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVI----TDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGNYSIP-ELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLI-DEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXX--XXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKT----GMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIK---------------NWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNL 1856 ++ NFSDAS + A + S+ ++ L C K + + ++ + ++ N+AR+ + +K + E + FI +E V SM+ ++YI+++ + L+E + ++ +L + K NKR+ P E++ GL +++ + K KI G + ++ +L E ++ L F++ ++++LI DE + ++ +++ + ++ G++W + G ++ + KE+ +++ VF+SY+ +K V I + LK+ ++WID + M S L+AMA GIEN+ +I +S Y++SP+CR+EAEY ++ +K IPM++ ++ P+GWLG + G K++++ S + E+ L+ L+ GD G + + G T+ + +S ++KI + E ASWL KL + + DGK+L+ + +++ ++P+YF + ++K+ M ++ L+F AL ++ Sbjct: 122 TMWNFSDASAQLALSLAESDAVRLLTCNCGHKPYLNAIHSKNVHYIIKASLSILHNIARNPSIKHYFKEQKTSEVIQTFISSKDE-MFKVLSMMTMAYIVEEEDNQTLIEETGSILCMLQWLDKALDCNKRRYKGFTPYEIVQGLEKLAVTDSNKLKIVDGGILSMLSRMLQFDDVREQCSAARILWTLMFDENVRERLINDEQALVTLLESLKDNKDKLVSANVKGVLWLLNGATQVTEVDKETVRARAKTHVFISYSVVDKESVWRIRDRLKEEGYQLWIDVDCMGPSNLQAMASGIENAAVVLICMSEKYKQSPSCRTEAEYTFRLRKDYIPMMMQKKYNPDGWLGTMLGAKLFFDFSGKYPFEKSFGGLIKELRGRGQYSPGDAQVDGAEDQTNKAGTSTENSGNEQQSPSKKISIDHLVNDIGALSPIVEMTNDEIASWLHYHKLAEYSEAFSQFDGKMLFQLSEMKKEAPEYFYQCMEKKMNMSLVDTLRFTAALASI 624
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO45030 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RU69]) HSP 1 Score: 186.422 bits (472), Expect = 6.456e-50 Identity = 120/401 (29.93%), Postives = 229/401 (57.11%), Query Frame = 3 Query: 672 KLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNK-RKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDIL-HAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFD-VFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLD--DSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFM-EVLKFHNALNNL 1856 + A +++L+L+Y+ +S +L++ + ++ ++ K+ S N R ++ EL GL +I+ N+ K+ I Q+G IPI++D+L +AK + + ++ L F+ E K+ ++ +K ++ + +KK G++WEI GK KES + + + V +SY + ++++ ++L+ R+W+D EQM GS L+AMA +EN+ ++ +S Y++SPNCRSEAEYA+Q +K I+P+++ ++P+GWLG I G K++ + S+++ + ++D L+ +G G +G+ + E ++ V + I WS + +W++ +LG+ + L GKLL + +RS+SP++F ++K++FG + EVL F + LN L Sbjct: 432 QFAAKALLILAYLTDESNNSLIMASEEPIQFLIHILSKSCSSNSNRYLGFTNSELAEGLSQIAVNDSNKKLIGQHGAIPILVDMLANAKNDEQRRCGAEALWVLAFDNENKEAILTTPNAVELLKELQHSEDDSVKKAAAGVLWEIEGKESHTVKESTADEPLRNHVMISYQWDVQPTMIQVKSKLQAAGYRVWMDLEQMGGSTLQAMANAVENAEVVLMCVSQKYKESPNCRSEAEYAFQLRKDIVPLMMEKSYRPDGWLGMIMGAKLWIDFSDKQTLR--VDDSFEKLQKEIGMRG-RGRG-NVVESKLVAVQHDVVDVFPKIDISKWSKDDVMNWMNGFGLRLGNDSTIASHLSGKLLQRLAKLRSESPEFFYSSVKQDFGFAHLQEVLLFVDELNKL 828
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO41008 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5P1]) HSP 1 Score: 178.718 bits (452), Expect = 5.992e-47 Identity = 117/419 (27.92%), Postives = 217/419 (51.79%), Query Frame = 3 Query: 639 LIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKG-NYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDIL-HAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISER--RNVEEVMEDLVHTLKTGMG--------DNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMK-FMEVLKFHNALNNL 1856 L+ F+K G + ++L L+Y++ + +L++ + +L ++ S ++R+ ++ E+ G+ R+++N++ K I ++ G+ I+ ++ AK + E L +Y L F+ E K+ L + N ++ + + ++K GI+WEI GK + E + + +SY N+ ++ + LK+ ++W+D EQM GS LEAMAR +EN+ +I +S Y+ SPNCRSEAEYA+QR+K I+P+++ ++P+GWLG I G K++ + E + +M++L + + D S KE GP + V +++ W + A WL D L K LDG +L ++ ++ +SP+++ ++KK+ +EVL+F L L Sbjct: 843 LLLFMKCG-VTYFVMNALLCLAYLVDERNNDLIMADEEPITFLLRMLSSAISDSRRQHLGFAAWEIACGIGRVASNDKNKRLIGRHDGVSILSTLVKEAKNDAERVYGLQALYMLSFDGENKKILCKDKATVNLLRNLKQSGHKEVQKAAVGILWEIEGKVGRDRNEDSQQH----IMISYQWDNQKAMLAVNKRLKEAGHKVWMDVEQMGGSTLEAMARAVENASVILIAMSQRYQDSPNCRSEAEYAFQRRKKIVPLMMEQDYRPDGWLGMILGAKLWMDFRESVDTGIVHLMKELQYNQTAALQQPHDPVTVDTTTVISSPPDKEDGPPGPTDVVDRPDVSK----WKKEDVAKWLSDIGLSSSNKVRKKLDGSMLILLYRLKQESPEFYYASVKKDMDFPTVIEVLQFTEELRKL 1252 HSP 2 Score: 113.62 bits (283), Expect = 5.350e-26 Identity = 52/136 (38.24%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 1161 VFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGK 1568 V +SY + V+++ +EL+ ++WID EQM GS LEAMA +EN+ ++ +S Y++SPNCRSEAEY++Q +K IIP+++ ++KP+GWLG I G K++ + + ++ L+ L G G K Sbjct: 555 VMLSYQWGYQDVVLKVRDELRAAGYKVWIDVEQMEGSTLEAMASAVENAAAVLMCVSRAYKESPNCRSEAEYSFQLRKDIIPLMMEPQYKPDGWLGIIVGAKLWMDFRSKDATSSAVQGLIKEL----GQRGRPAK 686
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO33720 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRG5]) HSP 1 Score: 78.5666 bits (192), Expect = 4.026e-18 Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 1260 MTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEIS 1484 M GS LEAMA +ENS ++ S Y+ S N RSEAEYAY ++K I+P+++ +KP+GWLG I G K+Y+ + Sbjct: 1 MGGSTLEAMANAVENSAVVLMCASRKYKDSVNYRSEAEYAYTQKKPIVPLMMENGYKPDGWLGMIMGSKLYFNFA 75
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO39316 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAI7]) HSP 1 Score: 67.0106 bits (162), Expect = 4.788e-12 Identity = 35/138 (25.36%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 1161 VFVSYAHQNKSKVMEIFNELKKWNIRIWID-KEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKT----IIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGE 1559 V +SY + V ++++ L+ + IR+W+D + G + +MA+G++ + +S Y +S NC+ E YA + I+P++ FK +GWLG I ++ + + N E ++ L + +GD+ + Sbjct: 4 VMLSYQWDIQDLVKKVYDGLRAYGIRVWMDIHGGIRGDINGSMAKGVDGAAILCCFMSTKYSESKNCKKELSYADGKTGCEEVIIVPVMCEKGFKAKGWLGIITAGLLWIDFRDEANFENSVKSLAQEIMHAVGDSSD 141
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Match: EDO33105 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7ST59]) HSP 1 Score: 54.6842 bits (130), Expect = 9.336e-8 Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 1155 FDVFVSYAHQNKSKVMEIFNELKKWNIRIWID-KEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTII 1403 FD+ +SY +S V E++ EL + + W+D M G++ EAMA +ENS + ++ Y++S NC E +YA ++K II Sbjct: 411 FDIMLSYNWGIQSFVREVYMELSQQTFQTWMDIWGGMQGNINEAMATAVENSTMLVAFLTEKYQQSVNCNLELKYATMKEKPII 494
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000079659.1 (SMESG000079659.1) HSP 1 Score: 1131.32 bits (2925), Expect = 0.000e+0 Identity = 572/578 (98.96%), Postives = 573/578 (99.13%), Query Frame = 3 Query: 132 MEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI 1865 MEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVN ILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIE SIKLYENHVNPVIKKYHDGIMWEIRGKNEIKKK SDSKKSEFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKE GPHTDENAVANKSINEKIKNWSTAETASWLDDSKLG+LKKRLNDLDGKLLYVM DIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI Sbjct: 1 MEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNSILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIEKSIKLYENHVNPVIKKYHDGIMWEIRGKNEIKKKGSDSKKSEFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEAGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGYLKKRLNDLDGKLLYVMFDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI 578
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000079651.1 (SMESG000079651.1) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 481/582 (82.65%), Postives = 522/582 (89.69%), Query Frame = 3 Query: 132 MEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITD----ETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI 1865 M LP+ S C +F E +II+YL VI IL++N+ +D+ D+L RI +YF+W+NH++KICQLFIEK+LL+T+Y+YL +F + + D+ ++ L L NFSDASVEFA + S++L F+IDQC +K+ I D KE + CV+VISNVARDLGNQI+YK ELKESLIEFIK+GNEDKLA+QSML LSYII DSEVNLLVEGSNTVNGILMLIK+T S R+GNYSIPELMLGLFRISANNEIKEKI +NGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIE SIKLYENHVNP IKKYHDGIMWEIRGKNEIKKK SDSKKSEFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEV+EDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLG+LKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI Sbjct: 1 MNNLPERSICLKFSEAEIIDYLTTVITILDNNRENVDV--INDMLIRICNSYFDWENHINKICQLFIEKHLLDTVYIYLDYFHRKLNIKDKLVNYLYTLLTNFSDASVEFAQNLNSSKVLPFIIDQCTKKEFINDIHDENIKEHLENCVLVISNVARDLGNQIEYKEKELKESLIEFIKLGNEDKLAIQSMLTLSYIINDSEVNLLVEGSNTVNGILMLIKETCSIEGREGNYSIPELMLGLFRISANNEIKEKIYKNGGIPIIIDILHAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIEKSIKLYENHVNPEIKKYHDGIMWEIRGKNEIKKKGSDSKKSEFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVIEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGYLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLAYI 580
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000035587.1 (SMESG000035587.1) HSP 1 Score: 338.961 bits (868), Expect = 8.160e-108 Identity = 210/583 (36.02%), Postives = 337/583 (57.80%), Query Frame = 3 Query: 129 KMEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNH-VDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVIT----DETKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDILHAKV-ENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXX-XXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINEKIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNL 1856 K++ LPDE+ C I+YL++VI LE K + NI +L+ RI A++++ N +DK+C F ++NL+ ++ +L++ + + + L NFS+ EFA + S + ++ID+ ++ E K F + + +I N A ++I+Y+ +E+K++ + + + +D + S++ LSY+I ++E+NL N V ++ IK R ++I EL+ GL R+SAN+EIK I+ GI ++IDIL++ EN IE TL I LCFN +IK KLI+ ++I ++ + NH N I ++++GI+W + K E K ++ FD F+SY+ NK KV+EI + LK +N+ +WID+E+M S LEAMA GIENS+ +I S Y+ S NCR EAEYA + +K IIP+++ ++KP WLG + G K+Y E S+RRN E ++ L+ +K + + + G N+ + +++KNWS WLD +G+LK++ +DG ++ VMLDIR S DYFN LK EF M F+EV+KFH ALN+L Sbjct: 9 KLKILPDETMCKILNLENAIKYLSDVIDFLEKIKIADEYNIY-NLILRISNAFYDYYNKFIDKVCYEFKKRNLVNLIHFFLQNQNKISSQKENTIYLMYIILANFSEHDYEFAGMLESSNTINYIIDKYLQFDSSNIKNCKENKNF-KSLITIIHNFASHKLDKINYRVDEIKKTFLNIVNLNCDDYYGLISLVTLSYLIDENEINLFDGHENIVKELIKKIKLINENKLRSEGFTIKELIHGLRRLSANDEIKTIIDTENGIQVLIDILNSTNNENVIEPTLDVIKQLCFNNDIKIKLINHYKIGETLTKFSNHSNAKICQHYNGILWILDNKLESLPKGNTEKTAIVFDAFMSYSWANKDKVLEICSILKSYNVNVWIDQEEMISSTLEAMATGIENSKVVVIAASTAYKNSSNCRLEAEYAQKIKKPIIPLVMEHKYKPSNWLGILFGTKVYIEFSDRRNANEQVQQLIKNIKFHLNRPVKLAEKIDL-NAGEKNRSNSRTRIVLVDEVKNWSCENVGDWLDKFGIGYLKEKFIGVDGSMIEVMLDIRINSGDYFNNCLKNEFKMNFIEVVKFHKALNDL 588
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000015387.1 (SMESG000015387.1) HSP 1 Score: 329.331 bits (843), Expect = 4.025e-104 Identity = 201/599 (33.56%), Postives = 337/599 (56.26%), Query Frame = 3 Query: 126 IKMEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICAYFNWDNHVDKICQLFIEKNLLETLYLYLKHFLLE--FQLDDERLDAL--LKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDETKE----FVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGN-YSIPELMLGLFRISANNEIKEKINQNGGIPIIIDIL-HAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRG---------XXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMGDNGEQGKSEHFKEPGPHTDENAVANKSINE--KIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLA 1859 + + ++PD F EPQ ++Y+ + ++ L++ ++ ++ NI + I +YF+ +H++ + + + + Y+ F E F DD L SL N+ D E A++I +++ ++LI + + + + ++ + +I N+ R GN+ ++ ELK L+ IK + D + + SML LS ++ +SE++LL EG N++ ++M I+ + +K N ++I EL+ GL +SAN+ +K+ I GI +I DIL + +N+IE LG ++NLCF+++IK L+++F+++ I ++NH IK+ ++GI+W I + K ++ +FDVF+SY NK V+ I + L + NI+IWID +QM GS LEAMA GIENS FI+ IS Y SPNCR+EAEYA+ K IIP+I+ ++KP WLG I G KMYYE S+RRN EE + L+ + T + N E+ P + ++ + + +WS WL + LGH+K R + DGKLL+ ++D+++KS Y LK E+GMKF+++LK H+A+N + Sbjct: 1 MSLHEVPDYE--KSFTEPQAVDYMKKALEKLKELQDSLNFNIIYKIFKGISQSYFDLKSHLNALSNVLLNLKYVSITSNYVGKFSKEGYFVNDDVWFATYYALNSLWNYCDGFQEIANEIVVTDLPQYLIANLLHRPYLDNMKNTNIFYLIKASISIIHNIVRCPGNEEKFQIIELKNVLVGLIKRNDSDFIVLISMLTLSCLVNESELHLLDEGKNSIKALIMKIRTAFENDSKKVNGFAIWELVNGLKCVSANDNVKKTIVTENGIKLIFDILKNPTCDNDIEKCLGVLWNLCFDKDIKAILVNDFDLKLFINRFKNHKLSTIKRCYNGILWLIDEKIQSKERILSAHLSKVKASKTHWKFDVFISYCWANKQMVLSIRDFLVQSNIKIWIDLDQMKGSTLEAMADGIENSNIFIMAISEAYRTSPNCRTEAEYAFSLNKPIIPLIVEMKYKPTSWLGIIMGSKMYYEFSKRRNFEESIHSLLANVNT-IIQNVERKIVTEIIVPVAQNESYQSSDGGTPKILSVHSWSNKIVEKWLVKNGLGHVKSRFMNFDGKLLFSLIDVKNKSRKYLIDALKVEYGMKFIDLLKLHSAINEIC 596
BLAST of TIR domain-containing protein vs. Planmine SMEST
Match: SMESG000035607.1 (SMESG000035607.1) HSP 1 Score: 327.405 bits (838), Expect = 6.694e-104 Identity = 210/559 (37.57%), Postives = 323/559 (57.78%), Query Frame = 3 Query: 270 RIICAYFNWDNH-VDKICQLFIEKNLLETLYLYLKHFLLEFQLDDERLDALLKSLMNFSDASVEFAHKIYCSEILKFLIDQCIEKKVITDE---TKEFVRCCVIVISNVARDLGNQIDYKANELKESLIEFIKIGNEDKLAVQSMLMLSYIIKDSEVNLLVEGSNTVNGILMLIKKTASFNKRKGNYSIPELMLGLFRISANNEIKEKINQNGGIPIIIDIL--HAKVENEIELTLGTIYNLCFNQEIKQKLIDEFEIENSIKLYENHVNPVIKKYHDGIMWEIRGXXXXXXXXXXXXXXXFDVFVSYAHQNKSKVMEIFNELKKWNIRIWIDKEQMTGSVLEAMARGIENSRFFIIGISPYYEKSPNCRSEAEYAYQRQKTIIPMILACRFKPEGWLGFIRGMKMYYEISERRNVEEVMEDLVHTLKTGMG--DNGEQGKSEHFKEPGPHTD--------ENAVANKSINE-------------KIKNWSTAETASWLDDSKLGHLKKRLNDLDGKLLYVMLDIRSKSPDYFNKTLKKEFGMKFMEVLKFHNALNNLA 1859 R+ +YF++ N +DK+C+ +I K ++ LY LL+ ++ +D +L L+NFS+ S A +I SEILK++ID+ + E + + V +I N R N+ +YK +++K+S + I++ ++D + SML+LSY+I EV++L++G N ++ +L IK T++ KR +++ ELM GL I+AN+ +K++I + GI I+I+++ H ++ IE TLG I +LCF+ EIK KLI+ +I+N IK Y + IK+ +DGI+WE+ + ++ S +FDVF+SY NK ++ EI LK IR WIDKEQM+GS +EAMA+GIENS FIIG+S Y+KS NCR EAEYA++ +K IIP+I+ ++KP WLGF+ G K+Y+E S+RRN E ++ L+ + + DN Q KS K D +N NK I++ KIK W+ + WLD ++ K DL G L M +I K P LKK F M +E++KF AL NL+ Sbjct: 2 RLSNSYFDYYNKFIDKVCEHYISKCIITNLY----RLLLKLT-NESTIDYILTFLVNFSEHSEIMACEIGSSEILKYVIDKYFGMNLSDPEECKSSRIFKLYVTIIHNFFRYPHNRSEYKIDDIKQSFFKMIQLDSDDYFGIISMLILSYVIDGKEVDMLIKGQNILHNLLQKIKFTSTSTKRIEGFNLQELMHGLRFIAANDTMKKRI-YDEGIEILINVIKFHKDDKDVIESTLGVIEHLCFDNEIKLKLINSCKIKNLIKPYAKCKSVKIKEIYDGILWEL--DKKSVDLKTKSDNMKFDVFISYCWANKEQIEEILESLKIHKIRAWIDKEQMSGSSIEAMAKGIENSAVFIIGVSSSYKKSCNCRHEAEYAFRIKKPIIPLIMEMKYKPTEWLGFLLGNKIYFEFSDRRNPNEEVKGLIVEINRNLHPIDNEVQSKSNSVKNTQKSHDLPNSNSETKNEDCNKVISKSNFPVPSDSDTLGKIKMWTNEDVLKWLDKIQMSGFKTHFKDLSGSHLLTMQEICLKDPSLIRDDLKKTFNMNIIEIVKFETALKNLS 552 The following BLAST results are available for this feature:
BLAST of TIR domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of TIR domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TIR domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TIR domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TIR domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of TIR domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30021281 ID=SMED30021281|Name=TIR domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1995bpback to top protein sequence of SMED30021281-orf-1 >SMED30021281-orf-1 ID=SMED30021281-orf-1|Name=SMED30021281-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=579bp MEKLPDESDCAEFEEPQIIEYLNEVIKILEDNKNEIDINIAGDLLNRIICback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|