Meiosis specific nuclear structural 1

Overview


Name	Meiosis specific nuclear structural 1
Smed ID	SMED30021222
Length (bp)	1600

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Meiosis specific nuclear structural 1 (SMED30021222) t-SNE clustered cells

Violin plots show distribution of expression levels for Meiosis specific nuclear structural 1 (SMED30021222) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Meiosis specific nuclear structural 1 (SMED30021222) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Meiosis specific nuclear structural 1 (SMED30021222) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30021222

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30021222	SMESG000036318.1	SmedASXL_008214	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
pharynx	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
head region	SMED30021222	SMESG000036318.1	dd_Smed_v6_4463_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
pharynx	SMED30021222	SMESG000036318.1	dd_Smed_v6_4463_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
epidermis	SMED30021222	SMESG000036318.1	dd_Smed_v6_4463_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
epidermis	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017
ciliated epithelial cell	SMED30021222	SMESG000036318.1	dd_Smed_v4_4463_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Human
Match: MNS1 (meiosis specific nuclear structural 1 [Source:HGNC Symbol;Acc:HGNC:29636])

HSP 1 Score: 129.798 bits (325), Expect = 8.446e-32
Identity = 97/193 (50.26%), Postives = 143/193 (74.09%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE LA +L +++ ES +DEKMRQQ+RENS E++ELE KL+AAY+ KER AQ+AEK AI+Y+++  +AE+A+ + EE +   KE+   E    K K  Y   LE QL E+E ++Q+AYE+ L +K+MIDEIVRKIYEEDQ E++ ++ K  + ++YIEEF+K +  W+ ++++  EEENRKI++F  MQ++RE
Sbjct:   89 QEEKLAMELAKLKHESLKDEKMRQQVRENSIELRELEKKLKAAYMNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRIIKEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQKEQALWRKKKREEMEEENRKIIEFANMQQQRE 281

HSP 2 Score: 94.3597 bits (233), Expect = 5.864e-20
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQ 1457
            EEE  +++ ++A+FAE +++E MNAQK+RMKQLEH++ VE L+E+RR +    K    EE   Q++ +     IIEEER KLLKEHA  LLGYLPKGV K E D+++LG +F+K YQ
Sbjct:  370 EEEENFRKTMLAKFAEDDRIELMNAQKQRMKQLEHRRAVEKLIEERRQQFLADKQRELEEWQLQQRRQGFINAIIEEERLKLLKEHATNLLGYLPKGVFKKEDDIDLLGEEFRKVYQ 486

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Zebrafish
Match: mns1 (meiosis-specific nuclear structural 1 [Source:NCBI gene;Acc:573382])

HSP 1 Score: 135.961 bits (341), Expect = 4.511e-34
Identity = 100/193 (51.81%), Postives = 141/193 (73.06%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE +A++L R+  E  RDEKMRQ I+ENS E++ELE KL++AY+ +ER AQMAEK A++Y+ L EEA +AR +++E E AE EK   E    +  + YQ  LE QL EKE +RQ+AYEEFL +K M+DEIVRKIY EDQ E ++Q+ K K+ Q+YIE+FKK +  W+  E+++ E ENR+I++F   Q+++E
Sbjct:   89 QEERMAKELARINNEKLRDEKMRQYIKENSVELRELELKLKSAYLNRERAAQMAEKEAMRYETLREEAMIARTMRDEHELAEMEKEKLEQKKYEEVVRYQQELERQLEEKERKRQEAYEEFLKEKHMVDEIVRKIYMEDQMELQLQLDKMKATQRYIEDFKKQQAEWRRMEREKVEAENRRIIEFAQYQQRKE 281

HSP 2 Score: 89.3521 bits (220), Expect = 2.040e-18
Identity = 65/125 (52.00%), Postives = 89/125 (71.20%), Query Frame = 3

Query: 1119 AYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            A+++ +MA+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    +   E+E   + + E  RRKIIEEERQ+LLK+HA KLLGYLPKG+ K+E DLE     F+  +++   D   +E W
Sbjct:  374 AFRQMMMAKFAEDDRIEQMNAQKRRMKQLEHKRAVEQLLEERRQQYLAEQEREEQERAVELEREAQRRKIIEEERQRLLKQHATKLLGYLPKGIFKEE-DLEHFDEDFKNNFKQRQADIFSDEGW 497

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Zebrafish
Match: mns1 (meiosis-specific nuclear structural 1 [Source:NCBI gene;Acc:573382])

HSP 1 Score: 135.961 bits (341), Expect = 5.028e-34
Identity = 100/193 (51.81%), Postives = 141/193 (73.06%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE +A++L R+  E  RDEKMRQ I+ENS E++ELE KL++AY+ +ER AQMAEK A++Y+ L EEA +AR +++E E AE EK   E    +  + YQ  LE QL EKE +RQ+AYEEFL +K M+DEIVRKIY EDQ E ++Q+ K K+ Q+YIE+FKK +  W+  E+++ E ENR+I++F   Q+++E
Sbjct:   90 QEERMAKELARINNEKLRDEKMRQYIKENSVELRELELKLKSAYLNRERAAQMAEKEAMRYETLREEAMIARTMRDEHELAEMEKEKLEQKKYEEVVRYQQELERQLEEKERKRQEAYEEFLKEKHMVDEIVRKIYMEDQMELQLQLDKMKATQRYIEDFKKQQAEWRRMEREKVEAENRRIIEFAQYQQRKE 282

HSP 2 Score: 89.3521 bits (220), Expect = 1.683e-18
Identity = 64/125 (51.20%), Postives = 89/125 (71.20%), Query Frame = 3

Query: 1119 AYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            A+++ +MA+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    +   E+E   + + E  RR+IIEEERQ+LLK+HA KLLGYLPKG+ K+E DLE     F+  +++   D   +E W
Sbjct:  375 AFRQTMMAKFAEDDRIEQMNAQKRRMKQLEHKRAVEQLLEERRQQYLAEQEREEQERAVELEREAQRRRIIEEERQRLLKQHATKLLGYLPKGIFKEE-DLEHFDEDFKNNFKQRQADIFSDEGW 498

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Xenopus
Match: c1orf74 (chromosome 1 open reading frame 74 [Source:Xenbase;Acc:XB-GENE-951025])

HSP 1 Score: 211.075 bits (536), Expect = 2.481e-61
Identity = 217/456 (47.59%), Postives = 319/456 (69.96%), Query Frame = 3

Query:  126 EAVNREEKVDKKRMXXXXXXXXXXXXMLNHXXXXXXXXXXXXNQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            E++  EE+V+KKR ++ +Q +  E+ M   ++  EE RR+KE Q  QEE +A ++ R++ E  +DEK+RQQIRENS E++ELE KL+AAY+ +ER AQ+AEK  ++Y+++ E+ E  RK+Q++ E AE E+ ++E    + K++YQ  LE QL EKE  RQ+AY EFL +K++IDEIVRKIYEEDQ E ++++ K  + ++YIEEFK+ ++ W+  EQ R EEENRKIL F  MQ++RE     E + RE   + LQ+KLAE +QK++++R E+E +R+EL LEE+  +AR     +MEK+IRQRLE+Q+  EEQ   +   ++   EEE A+ + ++A+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    K    +E   +++ E  RR IIEEERQK+LK+HA +LLGYLPKG+ K E DL +    F++++QK   D    + W
Sbjct:   42 ESLKSEERVEKKRFLQRLQNEEHEKRMDEAIQLGEESRRLKERQLEQEERMALEMARIKHEKLKDEKIRQQIRENSTELRELEQKLKAAYLNRERAAQIAEKEVLKYEQMKEDLETVRKMQKDQERAEDEEIVRETKRYQEKLNYQIELERQLEEKEKTRQEAYHEFLKEKILIDEIVRKIYEEDQMETQLKLEKMNATRRYIEEFKEQQQTWRNMEQTRMEEENRKILAFANMQQRREEDRMAEVREREQQKKALQEKLAEQIQKEQQQREELEQMREELYLEEQAEEARQKAISEMEKKIRQRLEMQQTFEEQMAFKQIVQQAAKEEEEAFVQAMLAKFAEDDRIEQMNAQKRRMKQLEHKRAVEKLLEERRQQFIADKERELQERQEEERRESFRRAIIEEERQKILKQHATQLLGYLPKGIFKGEDDLNLFDEGFRQDFQKRRADISSNDGW 497

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Xenopus
Match: c1orf74 (chromosome 1 open reading frame 74 [Source:Xenbase;Acc:XB-GENE-951025])

HSP 1 Score: 211.075 bits (536), Expect = 2.762e-61
Identity = 217/456 (47.59%), Postives = 319/456 (69.96%), Query Frame = 3

Query:  126 EAVNREEKVDKKRMXXXXXXXXXXXXMLNHXXXXXXXXXXXXNQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            E++  EE+V+KKR ++ +Q +  E+ M   ++  EE RR+KE Q  QEE +A ++ R++ E  +DEK+RQQIRENS E++ELE KL+AAY+ +ER AQ+AEK  ++Y+++ E+ E  RK+Q++ E AE E+ ++E    + K++YQ  LE QL EKE  RQ+AY EFL +K++IDEIVRKIYEEDQ E ++++ K  + ++YIEEFK+ ++ W+  EQ R EEENRKIL F  MQ++RE     E + RE   + LQ+KLAE +QK++++R E+E +R+EL LEE+  +AR     +MEK+IRQRLE+Q+  EEQ   +   ++   EEE A+ + ++A+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    K    +E   +++ E  RR IIEEERQK+LK+HA +LLGYLPKG+ K E DL +    F++++QK   D    + W
Sbjct:   44 ESLKSEERVEKKRFLQRLQNEEHEKRMDEAIQLGEESRRLKERQLEQEERMALEMARIKHEKLKDEKIRQQIRENSTELRELEQKLKAAYLNRERAAQIAEKEVLKYEQMKEDLETVRKMQKDQERAEDEEIVRETKRYQEKLNYQIELERQLEEKEKTRQEAYHEFLKEKILIDEIVRKIYEEDQMETQLKLEKMNATRRYIEEFKEQQQTWRNMEQTRMEEENRKILAFANMQQRREEDRMAEVREREQQKKALQEKLAEQIQKEQQQREELEQMREELYLEEQAEEARQKAISEMEKKIRQRLEMQQTFEEQMAFKQIVQQAAKEEEEAFVQAMLAKFAEDDRIEQMNAQKRRMKQLEHKRAVEKLLEERRQQFIADKERELQERQEEERRESFRRAIIEEERQKILKQHATQLLGYLPKGIFKGEDDLNLFDEGFRQDFQKRRADISSNDGW 499

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Mouse
Match: Mns1 (meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933])

HSP 1 Score: 132.88 bits (333), Expect = 4.634e-33
Identity = 96/193 (49.74%), Postives = 145/193 (75.13%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE LA +L R++ ES +D+KMRQQ+RENS E++ELE KL+AAY+ KER AQ+ EK A++Y+++  +AE+ R + EE +   KE++ K+    K +  Y   LE QL ++E ++Q+AYE+ L +K+MIDEIVRKIYEEDQ ER+ ++ KK + QKYIEEF++ ++ W+ ++++  EEENRKI++F  +QE+RE
Sbjct:   89 QEERLANELARLKHESLKDKKMRQQVRENSIELRELEQKLKAAYMNKERAAQIVEKDAMKYEQMKRDAEIERIMMEEHDRLLKEESAKQERRNKERAQYYLDLEKQLEDQERRKQEAYEQLLKEKLMIDEIVRKIYEEDQVERQQKLEKKNAIQKYIEEFQRAQDFWRQKKREEMEEENRKIIEFANIQEQRE 281

HSP 2 Score: 104.76 bits (260), Expect = 1.732e-23
Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQK 1460
            EEE  +K+ ++A+FAE +++E MNAQK+RMKQLEHK+ VE L+E+RR +    K    EE+  Q++ +    +IIEEER +LLKEHA KLLGYLPKGV K E D++MLG +F+K YQK
Sbjct:  370 EEEETFKKAMLAKFAEDDRIELMNAQKQRMKQLEHKRAVEKLIEERRSQFLADKQRELEELQLQQRRQGCINEIIEEERLRLLKEHAAKLLGYLPKGVFKREDDVDMLGEEFRKAYQK 487

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Mouse
Match: Mns1 (meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933])

HSP 1 Score: 90.5077 bits (223), Expect = 3.067e-20
Identity = 63/131 (48.09%), Postives = 95/131 (72.52%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEI 656
            QEE LA +L R++ ES +D+KMRQQ+RENS E++ELE KL+AAY+ KER AQ+ EK A++Y+++  +AE+ R + EE +   KE++ K+    K +  Y   LE QL ++E ++Q+AYE+ L +K+MIDEI
Sbjct:   89 QEERLANELARLKHESLKDKKMRQQVRENSIELRELEQKLKAAYMNKERAAQIVEKDAMKYEQMKRDAEIERIMMEEHDRLLKEESAKQERRNKERAQYYLDLEKQLEDQERRKQEAYEQLLKEKLMIDEI 219

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Mouse
Match: Mns1 (meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933])

HSP 1 Score: 71.633 bits (174), Expect = 7.378e-14
Identity = 41/70 (58.57%), Postives = 58/70 (82.86%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEM 473
            QEE LA +L R++ ES +D+KMRQQ+RENS E++ELE KL+AAY+ KER AQ+ EK A++Y+++ EEAE+
Sbjct:   89 QEERLANELARLKHESLKDKKMRQQVRENSIELRELEQKLKAAYMNKERAAQIVEKDAMKYEQM-EEAEL 157

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Match: sp|A4IJ21|MNS1_XENTR (Meiosis-specific nuclear structural protein 1 OS=Xenopus tropicalis OX=8364 GN=mns1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.315e-60
Identity = 217/456 (47.59%), Postives = 319/456 (69.96%), Query Frame = 3

Query:  126 EAVNREEKVDKKRMXXXXXXXXXXXXMLNHXXXXXXXXXXXXNQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            E++  EE+V+KKR ++ +Q +  E+ M   ++  EE RR+KE Q  QEE +A ++ R++ E  +DEK+RQQIRENS E++ELE KL+AAY+ +ER AQ+AEK  ++Y+++ E+ E  RK+Q++ E AE E+ ++E    + K++YQ  LE QL EKE  RQ+AY EFL +K++IDEIVRKIYEEDQ E ++++ K  + ++YIEEFK+ ++ W+  EQ R EEENRKIL F  MQ++RE     E + RE   + LQ+KLAE +QK++++R E+E +R+EL LEE+  +AR     +MEK+IRQRLE+Q+  EEQ   +   ++   EEE A+ + ++A+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    K    +E   +++ E  RR IIEEERQK+LK+HA +LLGYLPKG+ K E DL +    F++++QK   D    + W
Sbjct:   42 ESLKSEERVEKKRFLQRLQNEEHEKRMDEAIQLGEESRRLKERQLEQEERMALEMARIKHEKLKDEKIRQQIRENSTELRELEQKLKAAYLNRERAAQIAEKEVLKYEQMKEDLETVRKMQKDQERAEDEEIVRETKRYQEKLNYQIELERQLEEKEKTRQEAYHEFLKEKILIDEIVRKIYEEDQMETQLKLEKMNATRRYIEEFKEQQQTWRNMEQTRMEEENRKILAFANMQQRREEDRMAEVREREQQKKALQEKLAEQIQKEQQQREELEQMREELYLEEQAEEARQKAISEMEKKIRQRLEMQQTFEEQMAFKQIVQQAAKEEEEAFVQAMLAKFAEDDRIEQMNAQKRRMKQLEHKRAVEKLLEERRQQFIADKERELQERQEEERRESFRRAIIEEERQKILKQHATQLLGYLPKGIFKGEDDLNLFDEGFRQDFQKRRADISSNDGW 497

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Match: sp|Q6PBA8|MNS1_DANRE (Meiosis-specific nuclear structural protein 1 OS=Danio rerio OX=7955 GN=mns1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.740e-33
Identity = 100/193 (51.81%), Postives = 141/193 (73.06%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE +A++L R+  E  RDEKMRQ I+ENS E++ELE KL++AY+ +ER AQMAEK A++Y+ L EEA +AR +++E E AE EK   E    +  + YQ  LE QL EKE +RQ+AYEEFL +K M+DEIVRKIY EDQ E ++Q+ K K+ Q+YIE+FKK +  W+  E+++ E ENR+I++F   Q+++E
Sbjct:   73 QEERMAKELARINNEKLRDEKMRQYIKENSVELRELELKLKSAYLNRERAAQMAEKEAMRYETLREEAMIARTMRDEHELAEMEKEKLEQKKYEEVVRYQQELERQLEEKERKRQEAYEEFLKEKHMVDEIVRKIYMEDQMELQLQLDKMKATQRYIEDFKKQQAEWRRMEREKVEAENRRIIEFAQYQQRKE 265

HSP 2 Score: 89.3521 bits (220), Expect = 1.351e-17
Identity = 65/125 (52.00%), Postives = 89/125 (71.20%), Query Frame = 3

Query: 1119 AYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            A+++ +MA+FAE +++EQMNAQKRRMKQLEHK+ VE LLE+RR +    +   E+E   + + E  RRKIIEEERQ+LLK+HA KLLGYLPKG+ K+E DLE     F+  +++   D   +E W
Sbjct:  358 AFRQMMMAKFAEDDRIEQMNAQKRRMKQLEHKRAVEQLLEERRQQYLAEQEREEQERAVELEREAQRRKIIEEERQRLLKQHATKLLGYLPKGIFKEE-DLEHFDEDFKSNFKQRQADIFSDEGW 481

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Match: sp|Q6AXQ8|MNS1_RAT (Meiosis-specific nuclear structural protein 1 OS=Rattus norvegicus OX=10116 GN=Mns1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.005e-32
Identity = 104/222 (46.85%), Postives = 160/222 (72.07%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE------IGLSEEKKA--REIMMQKLQQKL 905
            QEE LA +L R++ ES +DEKMRQQ+RENS E++ELE KL+AAY+ KER AQ+ EK  I+Y+++  +AE+ R + EE +   KE+ +K+    K +  Y   LE QL ++E ++Q+AYE+ L +K+MIDEIVRKIYEEDQ ER+ ++ K+ + QKYI+EF++ ++ W+ ++++  EEENRKIL+F  +QE+RE      +  SEEK+   + +++QKL++ L
Sbjct:   89 QEERLANELARLKHESLKDEKMRQQVRENSIELRELEQKLKAAYMNKERAAQIVEKDVIKYEQMKRDAEIERIMMEEHKRLLKEENVKQEKRDKERAQYYVDLEKQLEDQERRKQEAYEQLLKEKLMIDEIVRKIYEEDQLERQQKLEKRNAIQKYIKEFQRAQDLWRQKKREEMEEENRKILEFAKIQEQREGERMARVQESEEKRVQRQNLLIQKLEETL 310

HSP 2 Score: 106.301 bits (264), Expect = 4.031e-23
Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQK 1460
            EEE A+K+ ++A+FAE +++E MNAQK+RMKQLEHK+ VE L+E+RR +    K    EE+  Q++ +    +IIEEER +LLKEHA KLLGYLPKGV K E D++MLG +F+K YQK
Sbjct:  370 EEEEAFKKAMLAKFAEDDRIELMNAQKQRMKQLEHKRAVEKLIEERRNQFLADKQRELEELQLQQRRQGCINEIIEEERLRLLKEHASKLLGYLPKGVFKKEDDVDMLGEEFRKAYQK 487

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Match: sp|Q61884|MNS1_MOUSE (Meiosis-specific nuclear structural protein 1 OS=Mus musculus OX=10090 GN=Mns1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.241e-32
Identity = 96/193 (49.74%), Postives = 145/193 (75.13%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE LA +L R++ ES +D+KMRQQ+RENS E++ELE KL+AAY+ KER AQ+ EK A++Y+++  +AE+ R + EE +   KE++ K+    K +  Y   LE QL ++E ++Q+AYE+ L +K+MIDEIVRKIYEEDQ ER+ ++ KK + QKYIEEF++ ++ W+ ++++  EEENRKI++F  +QE+RE
Sbjct:   89 QEERLANELARLKHESLKDKKMRQQVRENSIELRELEQKLKAAYMNKERAAQIVEKDAMKYEQMKRDAEIERIMMEEHDRLLKEESAKQERRNKERAQYYLDLEKQLEDQERRKQEAYEQLLKEKLMIDEIVRKIYEEDQVERQQKLEKKNAIQKYIEEFQRAQDFWRQKKREEMEEENRKIIEFANIQEQRE 281

HSP 2 Score: 104.76 bits (260), Expect = 1.211e-22
Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQK 1460
            EEE  +K+ ++A+FAE +++E MNAQK+RMKQLEHK+ VE L+E+RR +    K    EE+  Q++ +    +IIEEER +LLKEHA KLLGYLPKGV K E D++MLG +F+K YQK
Sbjct:  370 EEEETFKKAMLAKFAEDDRIELMNAQKQRMKQLEHKRAVEKLIEERRSQFLADKQRELEELQLQQRRQGCINEIIEEERLRLLKEHAAKLLGYLPKGVFKREDDVDMLGEEFRKAYQK 487

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Match: sp|Q2KIQ2|MNS1_BOVIN (Meiosis-specific nuclear structural protein 1 OS=Bos taurus OX=9913 GN=MNS1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 2.394e-31
Identity = 96/193 (49.74%), Postives = 142/193 (73.58%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKRE 842
            QEE LA +L +++ ES +DEK+RQQ+RENS E++ELE KL+AAY+ KER AQ+AEK AI+Y ++  +AE+AR + EE E   KE++  E    + K  Y   LE QL E+  ++Q+AYE+ L +K+MIDEIVRKIYEEDQ ER+ ++ K  + ++YIEEF+K +  W+ ++++  EEENRKI++F  +Q++RE
Sbjct:   89 QEEKLATELAKLKRESLKDEKLRQQVRENSAELRELEKKLKAAYMNKERAAQIAEKDAIKYGQMKRDAEIARTMMEEHERLIKEESAAEDKRNQAKAQYSHDLEKQLEEQGKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLERQQRLEKMNTTRRYIEEFQKEQALWRKKKREEMEEENRKIIEFAKLQQQRE 281

HSP 2 Score: 104.375 bits (259), Expect = 1.494e-22
Identity = 64/118 (54.24%), Postives = 87/118 (73.73%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQK 1460
            EEE  +++ ++A+FAE +++E MNAQK RMKQLEHK+ VE L+E+RR +    K    EE  +Q++ +     I+EEER KLLKEHA KLLGYLPKGV K+E D++MLG +F+K YQK
Sbjct:  371 EEEETFRKAMLAKFAEDDRIELMNAQKPRMKQLEHKRAVEKLIEERRNQFLADKQRELEEWQWQQRRQGCINAIVEEERLKLLKEHATKLLGYLPKGVFKNEDDIDMLGEEFRKAYQK 488

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Match: K1PUJ9 (Meiosis-specific nuclear structural protein 1 OS=Crassostrea gigas OX=29159 GN=CGI_10002010 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.846e-72
Identity = 224/410 (54.63%), Postives = 299/410 (72.93%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            QEE LA +LE+ +++S RDEKMRQQIRE S E++ELE KLR+AY+ KER AQ+AEK AI++D +  ++E+AR+++ E E AE+    +E    + +I YQ  LE QL E+E Q+Q+AYEEFL +K+MIDEIVRKIYEEDQRERE+ M KKK+ QKYI EFK+ RE WK+ E++R EEENRKILQF  +QE+RE    E KK +E  M ++Q  LAED+  K+  R EME +R EL LEE+E K R  ERD ME+RIRQRLELQ    +Q   +  ++K + +EE  +++Q+MA+FAE +++EQMNA KRRMKQLEHK+ VE L++ R+ +    +    EE   ++++E  R++IIEEERQKLL+EHA +LLGYLPKGVI+D  DL MLG +F+  Y K  ID  DEE W
Sbjct:   21 QEERLAAELEKRKLDSIRDEKMRQQIRETSLELRELEAKLRSAYMNKERTAQIAEKEAIKFDVMKRDSEIAREMKIEHERAEEAARQREVEKYREQIRYQQELERQLEEREEQKQQAYEEFLKEKLMIDEIVRKIYEEDQRERELTMAKKKATQKYISEFKEAREEWKVLERERMEEENRKILQFSRLQEQRENARMESKKQKEEAMARVQNALAEDIAAKDAAREEMERIRMELYLEEQEEKERQKERDDMERRIRQRLELQSTHAQQMHFKNLRRKAEEDEEEEFRQQMMAKFAEDDRIEQMNANKRRMKQLEHKRAVEKLIDDRKSQFAADRERELEERREEERMEAFRKQIIEEERQKLLREHAMRLLGYLPKGVIRDSGDLNMLGSEFKDAYSKRQIDPFDEEAW 430

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Match: A0A210PY24 (Meiosis-specific nuclear structural protein 1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT23127 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.545e-70
Identity = 210/410 (51.22%), Postives = 300/410 (73.17%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            QEE LA+++ER +++S RDEKMRQQIRE S E++ELE KL++AY+ KER AQ+AEK A+++D++  +AE++R ++EE + AE+    ++    + +I YQ  LE QL E+EH++Q+AYEEFL +K+MIDEIVRKIYEEDQR+RE+ + K+KS QKYIEEFK  RE WK+ E+KR EEENR I  F  +QE RE G  E KKA+E  M ++Q  LAE++ +++ ER EME VR EL LEE+E + R+ E+  +E RIRQ++ELQ+   +Q   +  +K  Q EEE  +++Q++A+FAE +++EQMNA KRRMKQ EHK+ V+ L++ RR +    +     E   ++++E+ +R+I+EEERQKLL+EHA +LLGYLPKGVI+D  DL+MLGP F+  Y    +D  DE+ W
Sbjct:   88 QEERLAKEMERRKLDSMRDEKMRQQIRETSLELRELEAKLKSAYMNKERSAQIAEKEALKFDKVKRDAEISRNMKEEHDRAEEADIQRQKEQYREQIRYQQELERQLEEQEHKKQQAYEEFLKEKLMIDEIVRKIYEEDQRDRELALAKQKSTQKYIEEFKNAREEWKVLERKRMEEENRNIRAFARLQEDREKGRMESKKAKEDAMARVQGALAEEISRQDAEREEMERVRMELYLEEQEERERVKEKSDIEARIRQKIELQQTHAQQMHFKNLRKAAQEEEEEEFRKQMLAKFAEDDRIEQMNAAKRRMKQQEHKRAVDQLIDDRRFQFAADREREVMERREEERMEQFKRQIVEEERQKLLREHAMRLLGYLPKGVIRDTGDLDMLGPDFKSAYTARQVDPFDEDAW 497

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Match: A0A1S3HRT1 (meiosis-specific nuclear structural protein 1 OS=Lingula unguis OX=7574 GN=LOC106157588 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.671e-70
Identity = 215/415 (51.81%), Postives = 305/415 (73.49%), Query Frame = 3

Query:  255 QRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKT 1499
            Q +QEE +A +LER+++ES RDEKMRQQIRENS E++ELE KL+ AY+ KER AQ+AEK A++YD++  ++E+ARK++EE + A   +  +E    + ++ YQ  LE QL E+E ++Q+AYEEFL +K+MIDEIVRKIY+ED+RER++   K+++ Q YIEEF K R  WKI E++R EEEN+KI+ F  +Q++RE    EEKK RE  M K+Q KLA  + ++ER R EME VR+EL  EE+E   R  E+  +E+++R+RLELQR   EQ + +  +++ + EEE+ ++ Q++A+FAE +++EQMNAQKRRMKQLEHK+ VE L+E RR +    +    EE   ++Q+E  R++IIEEERQKLL+EHA +LLGYLPKGVI+D  DL MLG  FQ++Y+K  ID  D+E W+ 
Sbjct:   84 QLDQEERMALELERIKLESLRDEKMRQQIRENSLELRELEAKLKNAYMNKERTAQIAEKEALKYDKMARDSEIARKMKEEHQRAADAEYQREVERYQEQVRYQQELERQLEEQEIKKQQAYEEFLKEKLMIDEIVRKIYDEDERERQMHYEKQRATQAYIEEFMKARHEWKILEKERMEEENKKIMAFANLQQQREEARQEEKKQREEAMAKVQAKLANQIAEEERLRDEMERVREELYFEEQEEAERQKEKAAIERQLRERLELQRQHAEQMRYKAMRQQAEKEEEDEFRRQMLAKFAEDDRIEQMNAQKRRMKQLEHKRAVEQLIEDRRKQFSADRERELEERRLEEQMEAFRKQIIEEERQKLLREHAIRLLGYLPKGVIRDTGDLAMLGSDFQEQYKKRQIDPFDDEAWEA 498

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Match: A0A433SVE8 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_018954 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.631e-70
Identity = 228/459 (49.67%), Postives = 322/459 (70.15%), Query Frame = 3

Query:  132 VNREEKVDKKRMXXXXXXXXXXXXMLNHXXXXXXXXXXXXNQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALE---AQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKT 1499
            + REE V KKR++R  +   +E EM   + + E  R +K+ Q  QEE LA++LERV+ E  +DEKMRQQIRE S E++ELE KLRA Y+ KER AQMAE+ A++YD +  E+E+AR ++E+ E AE  +  +E    K  +  +  +     QL E+E ++Q+AYEEFL +K+MIDEIVRKIYEEDQRE E QM K+++ QKYI EFK  R+ WK+EE+K+ EEEN KIL+F    ++RE  L  +KK ++  M K+Q +LA+D+ +KE ER EME VR EL LEE+E + R  E  ++E++IRQ++E+Q    +Q   +  + + + EEE+ +++Q++A+FAE +++EQMNAQKRRMKQ EH + VE L+E RR +    + A   +   + +LEE R+KIIEEERQKLL+EHA KL+G+LP+GVI+DE DLEMLGPQFQ+ Y +  ID  DE  W+T
Sbjct:   12 IKREEVVTKKRLLRQQEVMKREMEMDEAITKGERNRIMKQQQMEQEENLARELERVKFEQLKDEKMRQQIRETSLELRELEAKLRAGYMNKERAAQMAEREAVKYDEMKRESEIARHMKEQNERAENAEQQRELERYKEMVRVRKLINKRYGQLEEQETKKQQAYEEFLKEKLMIDEIVRKIYEEDQRELERQMQKRQATQKYISEFKASRDAWKVEERKKMEEENAKILEFARRMQEREAILMSQKKEKDQAMVKVQVQLAQDIARKEAERTEMERVRMELVLEEQEERERQKEMSELERQIRQKIEMQSTHAQQMHYKALRMQAEKEEEDEFRKQMLAKFAEDDRIEQMNAQKRRMKQQEHARAVERLMEDRRAQFAREREAEASQRQEEARLEEFRKKIIEEERQKLLREHATKLIGFLPRGVIRDEDDLEMLGPQFQQAYTQRQIDPYDETTWET 470

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Match: A0A3M7QLF5 (Meiosis-specific nuclear structural 1 OS=Brachionus plicatilis OX=10195 GN=BpHYR1_016710 PE=4 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 3.691e-65
Identity = 207/409 (50.61%), Postives = 299/409 (73.11%), Query Frame = 3

Query:  267 EEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            EE LAQ+LE+ +++  R+ KMRQQ+RE S E++ELE+KL+ AY+AKER AQMAEK A ++D L+E+A++ ++++EE E AE  +   +         Y+  L  QL EKE+ +QKAYEEFL +K++IDEIVRKIYEEDQ+E E +++ +++ +++I+EFKK RE WKI+E++  E ENRKI ++  +Q++R+    E KKARE  ++K+Q +L E ++K    R EME VRQEL LEE+E   R HER +ME++IRQRL+LQ+  EEQ + ++ +++ + EEE + K+Q++ +FA  +K+EQMNAQKRRMKQLEHK+ VEALLE+RR  +   K    +E +   +L+  RR+IIEEER KLLKEHA KLLGYLPKGVI+D +DLE +G  F+K++QK  +D   +E W
Sbjct:   88 EESLAQELEKYKLDQLRENKMRQQLRETSYELRELESKLKEAYVAKERHAQMAEKEAQKFDSLLEDAQIMKRMKEESERAELHQKQIDQMKRIEMNQYKQDLHRQLEEKENNKQKAYEEFLKEKLLIDEIVRKIYEEDQKEHERKLLAQQATREFIDEFKKQREIWKIQEREIMEAENRKIAEYAKIQKERDDSQKESKKAREEAIEKVQSRLFEQIEKDREAREEMEHVRQELYLEEQEALVRNHERVEMERKIRQRLDLQKQYEEQMQYKVMRQQAEQEEEESIKKQMLDKFAADDKIEQMNAQKRRMKQLEHKRTVEALLEERRQRMNMEKQRELDERILSDKLDAYRRQIIEEERVKLLKEHATKLLGYLPKGVIRDSRDLEAMGDDFKKQFQKRQVDFFSDEGW 496

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Cavefish
Match: mns1 (meiosis-specific nuclear structural 1 [Source:NCBI gene;Acc:573382])

HSP 1 Score: 182.185 bits (461), Expect = 3.896e-51
Identity = 194/410 (47.32%), Postives = 288/410 (70.24%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            QEE +A++L R+  E  RDEKMRQ I+ENS E++ELE KL++AY+ +ER AQ+AEK A++Y+ L EEA++AR +++E E A  EK  +E    +  + YQ  LE Q+ EKE ++Q+AYEEFL +K+M+DEIVRKIYEEDQ ERE+++ K  + Q+YIEEFKK +  W+  E+++ EEENR+IL+F   Q+++E       + RE   + L + L+E ++ + ++R EME VR+EL LEE+   AR  E  +ME+RIRQRLELQ+   +Q   +  +++++ ++E A+++ ++A+FAE +++EQMNAQKRRMKQ EHK+ VE L+E+RR +    K    EE   +++ E LRR+IIEEERQKLLK+HA KLLGYLPKG+ + E DL+     F+  +++   D   E+ W
Sbjct:   49 QEERMARELSRIAYEKMRDEKMRQYIKENSPELRELEVKLKSAYLNRERSAQIAEKEAMRYEVLKEEADVARNLKKEQEQAAVEKEKEEQRRYEELVRYQQELEQQMEEKEQKKQEAYEEFLKEKLMVDEIVRKIYEEDQMERELRLEKVTATQRYIEEFKKQQAEWRRMEREKMEEENRRILEFAKYQQRKEEDRMASARKRETAKENLHKMLSEKIELERQQREEMERVREELYLEEQAEAARQKEIQEMERRIRQRLELQQTCRQQLAFKQLRQQEERKQEEAFRQMMLAKFAEDDRIEQMNAQKRRMKQQEHKRAVEKLIEERRQQYLADKEREAEEKAMEEEREALRRQIIEEERQKLLKQHATKLLGYLPKGIFR-EDDLQHFDEDFRSNFRRRQADIFSEDGW 457

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002987.1 (pep scaffold:Pmarinus_7.0:GL476525:1763:4651:1 gene:ENSPMAG00000002725.1 transcript:ENSPMAT00000002987.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 85.8853 bits (211), Expect = 4.435e-20
Identity = 54/94 (57.45%), Postives = 75/94 (79.79%), Query Frame = 3

Query:  558 YQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKR 839
            YQ  LE QL EKE ++Q+ YEEFL +K+++DEIVRKIYEEDQRE E++M K+++ Q YI+EF++ RE WK  EQ + EEENRK+++F  +QE+R
Sbjct:   35 YQQDLEQQLEEKERRKQEGYEEFLREKLLVDEIVRKIYEEDQREIELRMEKQRATQHYIQEFREKREEWKKMEQDKMEEENRKLMEFAHLQERR 128

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Nematostella
Match: EDO49952 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7REQ0])

HSP 1 Score: 145.206 bits (365), Expect = 8.378e-38
Identity = 110/218 (50.46%), Postives = 162/218 (74.31%), Query Frame = 3

Query:  255 QRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLA 908
            Q+ QE  LA++LER+++E+ +DEKMRQQIRENS E++ELE KL+A Y+ +ER AQ+AEK+ ++ DR+  + E+++K++EE E A   +  KE    +  + YQ  LE QL+EKE ++Q+AYEEFL +K+MIDEIVRKIYEED+RE   ++ K+++ Q+YI+EFK  R+ WK  EQ+  EEENR+IL+F  +Q++RE    E+KK +E  M  +QQKL+
Sbjct:   86 QQEQEIRLAKELERLKLEALKDEKMRQQIRENSVELRELEAKLKAGYMNRERAAQLAEKKVMEMDRVKRDIEISKKMEEEYERALVVEREKEMQKWQESVRYQTELEKQLIEKEKKKQQAYEEFLKEKLMIDEIVRKIYEEDEREIANRLEKQRATQRYIKEFKTKRDEWKAREQELMEEENRRILEFARLQQQREEERMEKKKEQEEAMATVQQKLS 303

HSP 2 Score: 83.1889 bits (204), Expect = 4.736e-17
Identity = 59/124 (47.58%), Postives = 95/124 (76.61%), Query Frame = 3

Query: 1122 YKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELET---SKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDE 1484
            ++++++ +FAE +++EQMNAQKRRM+QLEHK+ VE L+E RR++ +    ++LA+ +E   ++++E  RR+I+E+ERQ+LL+EHA KLLGYLPKGV++ E DL++    F+  Y+  H+D  DE
Sbjct:  375 FRQKMLQKFAEDDRIEQMNAQKRRMRQLEHKRAVEKLIEDRRMQFQQEREAELAARQE---EERMEMYRRQIVEQERQRLLREHATKLLGYLPKGVLRTEDDLDLFDDDFKTAYKSRHVDLFDE 495

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Medaka
Match: mns1 (meiosis specific nuclear structural 1 [Source:NCBI gene;Acc:101163401])

HSP 1 Score: 119.398 bits (298), Expect = 1.480e-28
Identity = 87/168 (51.79%), Postives = 123/168 (73.21%), Query Frame = 3

Query:  264 QEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWK 767
            QEE +AQ+L R+  E  R+E+MRQ+IRENS E++ELE KLR AY+ KER AQ+AEK A +++ L E+AE+  K++ E E A  E+   E    + ++ YQ  LE QLVE+E +RQ+AYEEFL +K+M+DEIVRKIYEEDQ  R++++ K K+ Q+ IEEFK+ +  W+
Sbjct:   85 QEERMAQELARINHERQREERMRQRIRENSLELRELETKLRLAYLNKERAAQIAEKEAKRFETLREDAELTHKIKSEDEQASIEQQKLEQKRYEQQLQYQKELEQQLVEQERKRQQAYEEFLKEKLMVDEIVRKIYEEDQLGRQLKLQKVKATQQDIEEFKQQQAEWR 252

HSP 2 Score: 85.5001 bits (210), Expect = 2.631e-17
Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 3

Query: 1107 EEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIW 1493
            EEE  +++ +MA+ AE +++EQMNAQKRR KQLEH++ VE LLE RR + E       +E   +++ E L RKIIEEERQKLLK HA KLLGY P+G+++ E DL +    FQK ++ H  D   E+ W
Sbjct:  366 EEEEVFRKMMMAKLAEDDRIEQMNAQKRRRKQLEHREEVEKLLEDRRRQREADMEMKAQERAREQETEALHRKIIEEERQKLLKRHAAKLLGYYPQGLLR-EDDLGLFDEDFQKNFKAHPPDAFSEDGW 493

[Close]

BLAST of Meiosis specific nuclear structural 1 vs. Planmine SMEST
Match: SMESG000036318.1 (SMESG000036318.1)

HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 3

Query:  204 MLNHXXXXXXXXXXXXNQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARXXXXXXXXXXXXXXXXXXXXXXXXXHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKXXXXXXXXXXXXXXLQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEKXXXXXXXXXXXXXXXHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKXXXXXXXXXXXXXXXXXLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKTFHNKRH 1517
            MLNHLREKEELRRIKENQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARKVQEEVENAEKEKAIKEANSAKNKIHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKIEEQKRNEEENRKILQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAEDMQKKERERREMEDVRQELALEEEERKARLHERDQMEKRIRQRLELQRDQEEQHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKQLEELRRKIIEEERQKLLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKTFHNKRH
Sbjct:   14 MLNHLREKEELRRIKENQRNQEEILAQQLERVRIESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDRLVEEAEMARKVQEEVENAEKEKAIKEANSAKNKIHYQAALEAQLVEKEHQRQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKLRENWKIEEQKRNEEENRKILQFMTMQEKREIGLSEEKKAREIMMQKLQQKLAEDMQKKERERREMEDVRQELALEEEERKARLHERDQMEKRIRQRLELQRDQEEQHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQLEHKKMVEALLEQRRIELETSKLASEEEMLYQKQLEELRRKIIEEERQKLLKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKTFHNKRH 451

The following BLAST results are available for this feature:

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Human
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Celegans
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Fly
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Zebrafish
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Xenopus
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Mouse
BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Cavefish
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Sea Lamprey
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Yeast
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Nematostella
BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Medaka
BLAST of Meiosis specific nuclear structural 1 vs. Planmine SMEST

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1


Match Name	E-value	Identity	Description
MNS1	8.446e-32	50.26	meiosis specific nuclear structural 1 [Source:HGNC...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
mns1	4.511e-34	51.81	meiosis-specific nuclear structural 1 [Source:NCBI...	[more]
mns1	5.028e-34	51.81	meiosis-specific nuclear structural 1 [Source:NCBI...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2


Match Name	E-value	Identity	Description
c1orf74	2.481e-61	47.59	chromosome 1 open reading frame 74 [Source:Xenbase...	[more]
c1orf74	2.762e-61	47.59	chromosome 1 open reading frame 74 [Source:Xenbase...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3


Match Name	E-value	Identity	Description
Mns1	4.634e-33	49.74	meiosis-specific nuclear structural protein 1 [Sou...	[more]
Mns1	3.067e-20	48.09	meiosis-specific nuclear structural protein 1 [Sou...	[more]
Mns1	7.378e-14	58.57	meiosis-specific nuclear structural protein 1 [Sou...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|A4IJ21\|MNS1_XENTR	1.315e-60	47.59	Meiosis-specific nuclear structural protein 1 OS=X...	[more]
sp\|Q6PBA8\|MNS1_DANRE	2.740e-33	51.81	Meiosis-specific nuclear structural protein 1 OS=D...	[more]
sp\|Q6AXQ8\|MNS1_RAT	1.005e-32	46.85	Meiosis-specific nuclear structural protein 1 OS=R...	[more]
sp\|Q61884\|MNS1_MOUSE	3.241e-32	49.74	Meiosis-specific nuclear structural protein 1 OS=M...	[more]
sp\|Q2KIQ2\|MNS1_BOVIN	2.394e-31	49.74	Meiosis-specific nuclear structural protein 1 OS=B...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
K1PUJ9	3.846e-72	54.63	Meiosis-specific nuclear structural protein 1 OS=C...	[more]
A0A210PY24	1.545e-70	51.22	Meiosis-specific nuclear structural protein 1 OS=M...	[more]
A0A1S3HRT1	1.671e-70	51.81	meiosis-specific nuclear structural protein 1 OS=L...	[more]
A0A433SVE8	2.631e-70	49.67	Uncharacterized protein OS=Elysia chlorotica OX=18...	[more]
A0A3M7QLF5	3.691e-65	50.61	Meiosis-specific nuclear structural 1 OS=Brachionu...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1


Match Name	E-value	Identity	Description
mns1	3.896e-51	47.32	meiosis-specific nuclear structural 1 [Source:NCBI...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000002987.1	4.435e-20	57.45	pep scaffold:Pmarinus_7.0:GL476525:1763:4651:1 gen...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO49952	8.378e-38	50.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1


Match Name	E-value	Identity	Description
mns1	1.480e-28	51.79	meiosis specific nuclear structural 1 [Source:NCBI...	[more]

BLAST of Meiosis specific nuclear structural 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1


Match Name	E-value	Identity	Description
SMESG000036318.1	0.000e+0	100.00	SMESG000036318.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30021222 ID=SMED30021222|Name=Meiosis specific nuclear structural 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1600bp
ATCTATATAAATCTTATATGGCTACTTTACGTCAAACCTGGCTTGCTAAC
CAGTCAAAAGAAGCGGAACGAATTAAATGGATAGAAGATACAGAACTTGA
AAGAAAAACCAGATTGCGGTATGAAGAGGCTGTAAATCGAGAGGAAAAAG
TTGATAAAAAGAGAATGATTCGTATAATTCAGCAACAAAATCAAGAAGAA
GAAATGTTAAATCATTTACGTGAAAAAGAAGAATTAAGACGAATTAAAGA
AAATCAAAGAAATCAAGAAGAAATTCTAGCCCAACAACTAGAAAGGGTGC
GAATTGAGTCAACAAGAGATGAGAAAATGAGACAGCAAATTAGAGAAAAT
AGTGAAGAAATTAAAGAGTTAGAGAACAAATTAAGAGCAGCTTACATTGC
CAAAGAACGTCAAGCACAAATGGCAGAAAAAAGAGCTATACAATATGATA
GATTAGTAGAAGAAGCTGAAATGGCTCGAAAAGTCCAAGAAGAAGTTGAG
AATGCTGAAAAAGAGAAAGCGATTAAAGAAGCAAATTCTGCTAAAAATAA
AATTCATTATCAAGCTGCTCTTGAAGCACAATTGGTAGAAAAAGAACATC
AAAGACAGAAAGCTTATGAAGAGTTCTTAAATGACAAAATGATGATTGAT
GAAATCGTAAGAAAGATTTATGAAGAAGATCAAAGGGAAAGAGAAATTCA
AATGATAAAAAAGAAATCCAATCAGAAATATATTGAGGAGTTCAAGAAAC
TTCGCGAAAATTGGAAAATCGAAGAACAAAAACGAAACGAAGAAGAAAAT
CGTAAAATCCTCCAATTTATGACTATGCAAGAAAAGCGTGAAATCGGATT
GTCGGAAGAAAAGAAAGCTCGAGAAATAATGATGCAAAAATTACAACAGA
AATTAGCGGAAGATATGCAAAAAAAAGAAAGAGAAAGACGGGAAATGGAA
GATGTACGACAAGAGTTGGCATTGGAAGAAGAAGAAAGAAAAGCAAGATT
GCACGAGAGAGATCAAATGGAAAAACGAATTCGCCAAAGACTTGAACTTC
AAAGAGATCAAGAAGAACAACACAAGATCCGGATTGAACAGAAGAAACAA
CAATTAGAGGAAGAAAATGCCTACAAAGAACAATTGATGGCCCAATTTGC
AGAACAGGAAAAATTAGAGCAAATGAATGCTCAAAAACGAAGAATGAAGC
AATTGGAACACAAGAAAATGGTTGAAGCACTTTTGGAGCAGAGAAGAATA
GAATTAGAAACATCGAAATTGGCGTCGGAAGAAGAAATGCTCTATCAAAA
GCAATTGGAGGAGTTACGGCGAAAAATAATCGAAGAAGAAAGACAGAAGC
TTTTGAAGGAGCACGCGTTTAAATTGCTGGGATATCTACCGAAAGGAGTT
ATCAAGGATGAAAAGGATCTGGAAATGCTGGGCCCTCAGTTTCAAAAGGA
ATATCAGAAACACCACATAGATGAGGATGATGAAGAGATATGGAAAACAT
TCCATAATAAACGCCATTGATGTACTGTTAAATGTCTTATTTAATTTTAG
AAACAAAAATGGTTCATCAACAAATAAAATTTTTATTCTTTTTAAAAAAA

protein sequence of SMED30021222-orf-1

>SMED30021222-orf-1 ID=SMED30021222-orf-1|Name=SMED30021222-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=506bp
LYKSYMATLRQTWLANQSKEAERIKWIEDTELERKTRLRYEEAVNREEKV
DKKRMIRIIQQQNQEEEMLNHLREKEELRRIKENQRNQEEILAQQLERVR
IESTRDEKMRQQIRENSEEIKELENKLRAAYIAKERQAQMAEKRAIQYDR
LVEEAEMARKVQEEVENAEKEKAIKEANSAKNKIHYQAALEAQLVEKEHQ
RQKAYEEFLNDKMMIDEIVRKIYEEDQREREIQMIKKKSNQKYIEEFKKL
RENWKIEEQKRNEEENRKILQFMTMQEKREIGLSEEKKAREIMMQKLQQK
LAEDMQKKERERREMEDVRQELALEEEERKARLHERDQMEKRIRQRLELQ
RDQEEQHKIRIEQKKQQLEEENAYKEQLMAQFAEQEKLEQMNAQKRRMKQ
LEHKKMVEALLEQRRIELETSKLASEEEMLYQKQLEELRRKIIEEERQKL
LKEHAFKLLGYLPKGVIKDEKDLEMLGPQFQKEYQKHHIDEDDEEIWKTF
HNKRH*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **cellular component**
Term	Definition
GO:0005635	nuclear envelope
GO:0005882	intermediate filament
GO:0005930	axoneme
GO:0036126	sperm flagellum
GO:0005634	nucleus
GO:0031514	motile cilium

Vocabulary: **biological process**
Term	Definition
GO:0007283	spermatogenesis
GO:0045724	positive regulation of cilium assembly
GO:0070986	left/right axis specification
GO:0044782	cilium organization
GO:0051321	meiotic cell cycle

Vocabulary: **molecular function**
Term	Definition
GO:0042802	identical protein binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000020	protonephridia
PLANA:0000034	epidermis
PLANA:0000099	neuron
PLANA:0000106	ciliated epithelial cell
PLANA:0000418	head
PLANA:0002032	epidermal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR026504	MNS1

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 142..177
None	No IPR available	COILS	Coil	Coil	coord: 338..398
None	No IPR available	COILS	Coil	Coil	coord: 415..449
None	No IPR available	COILS	Coil	Coil	coord: 181..201
None	No IPR available	COILS	Coil	Coil	coord: 241..261
None	No IPR available	COILS	Coil	Coil	coord: 53..96
None	No IPR available	COILS	Coil	Coil	coord: 288..329
None	No IPR available	COILS	Coil	Coil	coord: 100..134
None	No IPR available	PFAM	PF13868	TPH	coord: 107..458 e-value: 3.2E-66 score: 223.3
IPR026504	Meiosis-specific nuclear structural protein 1	PANTHER	PTHR19265	MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1	coord: 36..482

Main menu

Meiosis specific nuclear structural 1

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 12

Owlery

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