Tigger transposable element derived 6
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30021171 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD6 (tigger transposable element derived 6 [Source:HGNC Symbol;Acc:HGNC:18332]) HSP 1 Score: 169.474 bits (428), Expect = 6.336e-46 Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 Query: 29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369 VA+++ + +TLST K++ F+ +R+ + KRM + +D +D AV + E NI + G+++++K L D F+AS GWL+ + +GI A M+ G DK N+W+ + LI Y +DIFN DETG+F + L K + + +++ F G +K+ ++ ASPHC KN++SLP D N+ AWM +F +WLM++D + R + D+CSAH ++ L I + + P N TA+LQP++ I +K Y++ ++K+IL ++ E+ ++ + I I+ W + P+T+ C++K+G +F + D A E + ++ + + E F D++ D +++ I D DII+++ ++ N E G DE +S E VT +E I +QKLR Sbjct: 33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD6 (tigger transposable element derived 6 [Source:HGNC Symbol;Acc:HGNC:18332]) HSP 1 Score: 169.474 bits (428), Expect = 6.336e-46 Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 Query: 29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369 VA+++ + +TLST K++ F+ +R+ + KRM + +D +D AV + E NI + G+++++K L D F+AS GWL+ + +GI A M+ G DK N+W+ + LI Y +DIFN DETG+F + L K + + +++ F G +K+ ++ ASPHC KN++SLP D N+ AWM +F +WLM++D + R + D+CSAH ++ L I + + P N TA+LQP++ I +K Y++ ++K+IL ++ E+ ++ + I I+ W + P+T+ C++K+G +F + D A E + ++ + + E F D++ D +++ I D DII+++ ++ N E G DE +S E VT +E I +QKLR Sbjct: 33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD4 (tigger transposable element derived 4 [Source:HGNC Symbol;Acc:HGNC:18335]) HSP 1 Score: 139.428 bits (350), Expect = 3.089e-35 Identity = 106/353 (30.03%), Postives = 166/353 (47.03%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 K ++A +Y + N+LS+I KNK F K KR+ T + ++ A+ + A N+P+NG ML+ K + L + F+ SNGWLD K G+V A + A G + + W + +L + Y ++FN ETGL N +K + + + G +KL ++ +PHCFK + SLPV + NR AWM S +F +W+ KLD EF Q R V F +S AH + L +I L FFP L++ M I+ LK YR+ +IK+ L ++ + + +LLD + + W + P TI + ++GF Sbjct: 36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPE---VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: CENPB (centromere protein B [Source:HGNC Symbol;Acc:HGNC:1852]) HSP 1 Score: 91.2781 bits (225), Expect = 7.715e-19 Identity = 86/382 (22.51%), Postives = 158/382 (41.36%), Query Frame = 2 Query: 8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMST---GNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 P+ ++A ++ +P +TLSTI KNK+ + + + + S T +D ++ + + + +P+ G +LKEK + L D F ASNGWLD ++ +G+V + + W +P + Y D+F+ ET L+ + + LC ++A VL+C G +KL + A P + LP D N K + + AK+L LD ++R V +A D S L ++ L FFPP L+ ++ +K HYR ++ + + ++ ++ + ++ L + + ++ W + P+ I CFR++GF Sbjct: 24 PDLRKGEIARRFNIPPSTLSTILKNKRAI--LASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWRAREEQPPSVAEGYASQDVFSATETSLWYDFLPDQAAGLCGGDGRPRQATQRLS------VLLCANADGSEKLPPLVAGKSAKPRAGQ--AGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLTEALHFVAAAWQA-VEPSDIAACFREAGF 389
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333]) HSP 1 Score: 88.9669 bits (219), Expect = 3.498e-18 Identity = 90/374 (24.06%), Postives = 172/374 (45.99%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKKI---FKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKE---------NDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC----QGPKKLNCWLLAS---PHCFK--NVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQN-------REV*FFFDSCSAH-RKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRK 1036 S KK++ Y + +T+ I KNK+ + N + K K M + ++ +D + + ++ + IP++G + ++ K + AL + F AS+GWL K+ +GI + AAG K K ++T + ++E I+ D+TGLF L + ++ +++C G KLN ++ P FK ++++LPV + AW+ S+F +W K V +++ + D A ++ L S I++++ PPN+T+L+QPM + +K +YR G++++ + D K W +T+LD I +S+ W++ + +TI ++K Sbjct: 27 SFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQR---HGIPK----AAG--KGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLFWKCLPSRTLTLETDQSTSGCRSSRER---IIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGNDPKIFWKNLTVLDAIYEVSRAWNM-VKSSTITKAWKK 387 HSP 2 Score: 50.0618 bits (118), Expect = 7.377e-6 Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 1 Query: 469 FFKCLPGKSFVLQEDSCQKG-KDSKEKITIMLCANMSGTEKIKLLVIGKS 615 F+KCLP ++ L+ D G + S+E+I IM CAN +G K+ L V+GK+ Sbjct: 182 FWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKA 231
BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Match: cag (gene:FBgn0017414 transcript:FBtr0331937) HSP 1 Score: 48.521 bits (114), Expect = 4.293e-6 Identity = 30/111 (27.03%), Postives = 53/111 (47.75%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKKIFK----------NVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKK 319 S++ +A+++ + + I K+K+ K N +R NP + ++ FD + S NIPI+G M+++K KQ + L F AS+GWL+ +K Sbjct: 31 SVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNPLSQRGAQIDEMCFD--------WFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRK 133
BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Match: cag (gene:FBgn0017414 transcript:FBtr0088239) HSP 1 Score: 48.521 bits (114), Expect = 4.293e-6 Identity = 30/111 (27.03%), Postives = 53/111 (47.75%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKKIFK----------NVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKK 319 S++ +A+++ + + I K+K+ K N +R NP + ++ FD + S NIPI+G M+++K KQ + L F AS+GWL+ +K Sbjct: 31 SVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNPLSQRGAQIDEMCFD--------WFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRK 133
BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Match: ENSXETT00000046714.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460367.1:582927:585046:-1 gene:ENSXETG00000018570.1 transcript:ENSXETT00000046714.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 110.153 bits (274), Expect = 1.925e-25 Identity = 78/273 (28.57%), Postives = 125/273 (45.79%), Query Frame = 2 Query: 29 VAEKYVVPANTLSTISKNKKIFKNVL-RDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLAS---PHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFF 829 +A++ +P +TL TI K + + + P K K ++ ++ ++ + + + +N+PI+G ML+EK L D F ASNGW+D KK +V A+ + D + W L + Y+ +IFN DETGLF N C++ + + + F G +KL ++ P CFKNVN+LP + N KAWM + +F + + LD Q ++ F D C AH L+N+ L FF Sbjct: 33 LAKELGIPVSTLGTIIKQRASTEGSADKCGPQAKKRKYVTQSKYEQMEKLLQEWFAGLHASNVPISGIMLREKAVHIATRLGIDNFTASNGWIDRFKKRY---NVVYKAVCGESKSVDIDTVTNWKTNQLPCYLEGYELKNIFNTDETGLFFNVLPGKTFCFRGEDCHGGKLSKLRLTVLFTTNADGSEKLKPLVIGKSVKPRCFKNVNTLPTNYTANTKAWMTTKLFEEQMHLLDNRMRLQKHKILLFLDRCPAHPP---SLHLHNVKLVFF 299 HSP 2 Score: 53.1434 bits (126), Expect = 6.683e-7 Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 469 FFKCLPGKSFVLQEDSCQKGKDSKEKITIMLCANMSGTEKIKLLVIGKS 615 FF LPGK+F + + C GK SK ++T++ N G+EK+K LVIGKS Sbjct: 180 FFNVLPGKTFCFRGEDCHGGKLSKLRLTVLFTTNADGSEKLKPLVIGKS 228
BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042]) HSP 1 Score: 51.6026 bits (122), Expect = 2.481e-6 Identity = 72/338 (21.30%), Postives = 138/338 (40.83%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIF---------KNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHA--AGCDKNVANKWNKTILKPLIRIY-KENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGK---------QNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDK 931 S+K + +KY + +T+ + K K +++ D L ++K +S VD + ++ + N P++ +++ + K++ + LN T S+GW KK NG+ L+++ A + NVA+ + K + K + + ++N + LF + + K+ VL C G K ++ +P FK V PV N++A + IF W V + Q+ +V D C H K +N+ PP+ T+ +QP+D +R K +Y++ ++ +L +K Sbjct: 202 GASVKSLCDKYGIGTSTIYDLKKQKDKLLTFYSNSDAPDLMADRKTLHQAKNVS------VDKVLMEWIRQRRRENFPLSRSLIMAQAKKFHVLLNISTPCEYSSGWYGKFKKR---NGLSILSINGEKASEEYNVADNFVKKLNKLVSDEHLSAEQVYNAAKASLFWRHLPQKLVATAQKPPSSGLEDPKER--LTVLACSNAAGTHKARLLVIGKSRNPRAFKGVRVFPVTYTANKQAGITREIFQDWFENHFVPEARAHCMSVGLSQDAKVMLILDHCPTHPSAEFLVK-DNVFAVCLPPDCTSFIQPLDQGILRLFKSNYKSEFLQRMLTECNK 527
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Tigd4 (tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]) HSP 1 Score: 146.362 bits (368), Expect = 8.248e-38 Identity = 106/353 (30.03%), Postives = 168/353 (47.59%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 K ++A +Y + N+LS+I KNK F K KR+ T + ++ A+ + A N+P+NG ML+ K + L + F+ SNGWLD K G+V A + A G + + W + +L + Y ++FN ETGL N +K + + + G +KL ++ +P CFK + SLPV + NR AWM ++IF +W+ KLD +F Q R V F DSC AH + L +I L FFP L++ M+ I+ LK YR+ +IK+ L ++ + + +LLD + + W + P TI + ++GF Sbjct: 36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGISIDPSTVWYQNVLPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLALGTNMDGSEKLPLLIIGKNRAPRCFKGIKSLPVYYEANRTAWMTAAIFEQWMQKLDEKFQAQKRRVVIFVDSCPAHPE---VKNLKSIELAFFPSCLSSGFAAMNQGVIKSLKIKYRHCLIKKFLSSVESSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Cenpb (centromere protein B [Source:MGI Symbol;Acc:MGI:88376]) HSP 1 Score: 93.2041 bits (230), Expect = 1.282e-19 Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 2 Query: 8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLI---KSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA-----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 P+ ++A ++ +P +TLSTI KNK+ R K+ ++S +D ++ + + + +P+ G +LKEK + L D F ASNGWLD ++ +G+V + + + G + W+ +P + Y D+F+ ET L+ + F + AR ++ VL+C G +KL + S LP D N K + + AK+L LD ++R V +A D S L ++ L FFPP L+ ++ +K HYR ++ + + ++ ++ + ++ L++ + ++ W + P+ I TCFR++GF Sbjct: 24 PDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSP--YDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVACSGVTRSRARSSAPRAPAAPAGPATVPSEGSGGSTPG-WHTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGPARQATQR---LSVLLCANADGSEKLPPLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPSDIATCFREAGF 389
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390]) HSP 1 Score: 90.5077 bits (223), Expect = 7.696e-19 Identity = 93/375 (24.80%), Postives = 168/375 (44.80%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKKI---FKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKE---------NDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC----QGPKKLNCWLLAS---PHCFK--NVNSLPVD*DYNRKAWMNSSIFAKWLMKLDV--------EFGKQNREV*FFFDSCSAHRKDHL-KSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRK 1036 S KK++ Y + +T+ I KNK+ + N + K K M + ++ +D + + ++ + IP++G + ++ + + AL + F AS+GWL K+ +GI + AAG K K ++T ++E I+ D+TGLF L + ++ +++C G KLN ++ P FK ++++LPV + AW+ S+ +W K V G + + V D +AH + L S I++++ PPN+T+L+QPM + +K +YR G+I++ + D K W +T+LD I S+ W+ I TI ++K Sbjct: 27 SFKKLSVLYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQARFFFDALGMEGDFNASSGWLTRFKQR---HGIPK----AAG--KGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQSTCEYRTSRER---IIIMCCANATGSHKLNLCVVGKAKRPRAFKGTDLSNLPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAV-LLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYYRAGLIQKYMDEGNDPKTFWKNLTVLDAIYEASRAWN-QIRSNTITRAWKK 387
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782]) HSP 1 Score: 82.4185 bits (202), Expect = 3.060e-16 Identity = 117/501 (23.35%), Postives = 208/501 (41.52%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKK---IFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWN-------KTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLAS---PHCFKNVNSL--PVD*DYNRKAWMNSSIFAKWLMKLDV----EF----GKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFR-EEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFLIRSMK 1423 S K++A Y + T+ I KNK+ + + L K K M ++ +D A+ + ++ PI+G + ++ + + AL D F S GWL K+ I G + V + N + L+P I+N DETGLF K + ++ V+ C G KL ++ P FK+ ++L PV + AWM+ SIF +W K+ V E+ G Q + V +S + ++ L+S I ++ PPN+ +L+QP+ I +K +YR G++ L D K W K+TLLD + I+ W+L + P TI +++ + + T + + N E +L+ D +++TD +II Q Q+ S E+ I + E +++ + ++D +++ + +L P R +IR ++ Sbjct: 27 SSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQP-------EQIYNADETGLFWKCLPSRTTVIKGKCTVPGHNLGEER--ITVMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNYRAGLLHNNLEEGNDLKSFWKKLTLLDALYEIAMAWNL-VKPVTISRAWKQ--ILPAIEEKEGLDFDEDISGATVATILQHTKGLENVTPENLEKWLEIDSTEPGYEVLTDSEIIRRAQGQTDESSENDEERI-ELIPEKHINHTTALQWTENLLDYLEQQGDMIL-----PDRLVIRKLR 509
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q17RP2|TIGD6_HUMAN (Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 3.043e-45 Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 Query: 29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369 VA+++ + +TLST K++ F+ +R+ + KRM + +D +D AV + E NI + G+++++K L D F+AS GWL+ + +GI A M+ G DK N+W+ + LI Y +DIFN DETG+F + L K + + +++ F G +K+ ++ ASPHC KN++SLP D N+ AWM +F +WLM++D + R + D+CSAH ++ L I + + P N TA+LQP++ I +K Y++ ++K+IL ++ E+ ++ + I I+ W + P+T+ C++K+G +F + D A E + ++ + + E F D++ D +++ I D DII+++ ++ N E G DE +S E VT +E I +QKLR Sbjct: 33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q8BUZ3|TIGD4_MOUSE (Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.769e-37 Identity = 106/353 (30.03%), Postives = 168/353 (47.59%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 K ++A +Y + N+LS+I KNK F K KR+ T + ++ A+ + A N+P+NG ML+ K + L + F+ SNGWLD K G+V A + A G + + W + +L + Y ++FN ETGL N +K + + + G +KL ++ +P CFK + SLPV + NR AWM ++IF +W+ KLD +F Q R V F DSC AH + L +I L FFP L++ M+ I+ LK YR+ +IK+ L ++ + + +LLD + + W + P TI + ++GF Sbjct: 36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGISIDPSTVWYQNVLPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLALGTNMDGSEKLPLLIIGKNRAPRCFKGIKSLPVYYEANRTAWMTAAIFEQWMQKLDEKFQAQKRRVVIFVDSCPAHPE---VKNLKSIELAFFPSCLSSGFAAMNQGVIKSLKIKYRHCLIKKFLSSVESSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q8IY51|TIGD4_HUMAN (Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.484e-34 Identity = 106/353 (30.03%), Postives = 166/353 (47.03%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 K ++A +Y + N+LS+I KNK F K KR+ T + ++ A+ + A N+P+NG ML+ K + L + F+ SNGWLD K G+V A + A G + + W + +L + Y ++FN ETGL N +K + + + G +KL ++ +PHCFK + SLPV + NR AWM S +F +W+ KLD EF Q R V F +S AH + L +I L FFP L++ M I+ LK YR+ +IK+ L ++ + + +LLD + + W + P TI + ++GF Sbjct: 36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPE---VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|P48988|CENPB_CRIGR (Major centromere autoantigen B OS=Cricetulus griseus OX=10029 GN=CENPB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.958e-19 Identity = 88/376 (23.40%), Postives = 162/376 (43.09%), Query Frame = 2 Query: 8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGN---FDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKE---ME*NGIVR-----------------LAMHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 P+ ++A ++ +P +TLSTI KNK+ + + + + S T +D ++ + + + +P+ G +LKEK + L D F ASNGWLD ++ + +G+ R A+ + G + W +P + Y D+F+ ET L+ + F + AR ++ VL+C G +KL + S + LP D N K + + AK+L LD ++R V +A D S L ++ L FFPP L+ ++ +K HYR ++ + + ++ ++ + ++ L++ + ++ W + P I TCFR++GF Sbjct: 24 PDLRKGEIARRFNIPPSTLSTILKNKRAI--LASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRHGVVACSGVTRSRARTSTPRAPAAPAGPAAVPSEGSGGSTPG-WRTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGTARQATQR---LSVLLCANRDGSEKLPPLVAGKSAKPRASQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPADIATCFREAGF 389
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|P27790|CENPB_MOUSE (Major centromere autoantigen B OS=Mus musculus OX=10090 GN=Cenpb PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 8.965e-19 Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 2 Query: 8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLI---KSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA-----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 P+ ++A ++ +P +TLSTI KNK+ R K+ ++S +D ++ + + + +P+ G +LKEK + L D F ASNGWLD ++ +G+V + + + G + W+ +P + Y D+F+ ET L+ + F + AR ++ VL+C G +KL + S LP D N K + + AK+L LD ++R V +A D S L ++ L FFPP L+ ++ +K HYR ++ + + ++ ++ + ++ L++ + ++ W + P+ I TCFR++GF Sbjct: 24 PDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSP--YDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVACSGVTRSRARSSAPRAPAAPAGPATVPSEGSGGSTPG-WHTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGPARQATQR---LSVLLCANADGSEKLPPLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPSDIATCFREAGF 389
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A1E1X420 (Putative tigger transposable element-derived (Fragment) OS=Amblyomma aureolatum OX=187763 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.651e-53 Identity = 133/465 (28.60%), Postives = 231/465 (49.68%), Query Frame = 2 Query: 29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKD---HYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXX------XXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQS 1387 VA+ + +PA++LSTI ++ KR+ G F VD AV+ ++ + + NIP++G M++EK ++ + F AS+GWL + G +++ A D A+ W + L+ +I Y +D++N DETG+F +C+K A K + + + F G K+ ++ A P CFK + SLP D +N KAWM+ +F KW++ ++ E K+NR++ D+CSAH D ++L+NI +EF PPN T++LQP+D+ +K+ HYR+ +++ IL + ++ P I + + ++ W + PTTI C++K+G ++++N E + +S RL ++ F DY CD V +T DI+ + Q E+S G E +S++ + V C++KL+ QQ+ Sbjct: 31 VAKAFGIPASSLSTIKSQRQAIAAASESAQLGPARKRLCAGYFSKVDEAVATWLKDLRSRNIPVSGPMIQEKAVEFAALFSVTGFEASSGWLHRFRARYG-IGWKQVSGEARSADTAAASTWREEKLRDVISAYSPDDVYNADETGVFYQLLPDKTMCFKDDACKGGKHSKVRITALFCCNASGTHKMKPLIIGRYARPRCFKGLASLPCDYAHNSKAWMSRDLFTKWIVGVNNEMAKKNRKILLILDNCSAHLVD---TRLSNIRVEFLPPNCTSILQPLDLGIIKNVKVHYRHRLVQRILINLRMQKREP-INVRQAAEMLTGAW-WTVKPTTIVNCWQKAGLNAANWTAVDASPEEEENDSDEGSTEPGDWKELSERLGTDSPLPFEDYACCDSQVETCATLTTEDIVASALPQEQEEEEEEEESTEGAPTEEKISAKEALV-------CLEKLKTFAAQQT 482
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A2S2QVQ0 (Tigger transposable element-derived protein 4 OS=Sipha flava OX=143950 GN=Tigd4_8 PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.476e-52 Identity = 147/479 (30.69%), Postives = 236/479 (49.27%), Query Frame = 2 Query: 11 NKSIKK--VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNV------ANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVP 1396 +K IKK +AE+Y +P ++LSTI KN++ + N L KR+ ++ VD AV +++ N N+PI+ ++K+K + L D FRAS+GWLD K M C K+V ++ W IL LI + DIFN DETGLF L +K + +++ +L+C G +K ++ +P CFK + SL + D+N+KAWM S+IF KWL+ +D + R++ F +C+AH + L KL +I L +FP N++ LQPM+ I LK +YR ++ ++ I +N ITL D I +SK W D+ IK CF ++GF D + + + N ++L+ DYL D ++ + D DI+E+V+ + S + +E DE + E +T E+++ +RNG+ QQ ++P Sbjct: 20 DKGIKKKDIAERYGIPTSSLSTILKNRENIIRQVESNNLLKNRKRIKVCVYEKVDKAVLKWIACKQNYNLPISNMLIKKKAIHFAQKLGFDDFRASSGWLDKFKSRHN-------IMFKVICGKSVDISEEDSDLWKSNILPKLIEKFDPKDIFNADETGLFFKCLPNQTLDFKHEKCFSGKRSKERIT---LLVCSNMTGTEKQKLLIIGENKNPRCFKGIKSLETNYDFNKKAWMTSNIFEKWLLDIDRKMSLDKRKIILFVRNCTAHPR-TLCLKLKSITLAYFPSNISK-LQPMNQGIINNLKVYYRKRILNKV---ISNNKNNITITLRDCISEVSKAWSNDVASEIIKKCFSRAGFKKMFIKTDVKVPDVQQEWDIDQCNDMTLQ----------DYLKIDEDITVYESPIDDDIVEDVKKKENSGEDRYE-------DENESAEELPKLTEEEILNAFSVVRNGLRQQVNIP 466
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A4D5RER3 (Putative tigger transposable element-derived (Fragment) OS=Ixodes scapularis OX=6945 PE=4 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.012e-49 Identity = 130/420 (30.95%), Postives = 208/420 (49.52%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVAN--KWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFRE-EFTDYLDCDVN-VVCGDIMTD*DIIENVQN 1240 N S + +A+K+ +P +TLST +NKK + F KR+ + ++ A+ ++ + + N+P++G+++ K + L L D F AS GW + E + +V A+ G D N+ W L+ +R Y DIFN DET LF + YK + +++ G +KL +++ A P CFKN+ SLP D N+KAWM ++F +WL KLD +F +NR+V D+CSAH D +L I L F PPN T++LQPMD I+ +K YR +++ ++ E+ ITLL + + WD + TI CFR GF D+ + + + I + ++ +FTDY+D D + +VCG +TD +II +V+ Sbjct: 57 NASKQDIAKKFGIPRSTLSTYIRNKKAIVDAYEVEAFSGDRKRLRPAKYPDLEKALVTWIKDMRSLNLPLSGSVIMAKAADFALRLEHDDFAASEGWFHRFR---ERHDLVFRAVSGEGQDTNMETCAMWKSGALQDYLRSYSPCDIFNADETALFFKLLPNKTITYKGDNCAGGKRSKERVTVMLAANMTGTEKLPIFVIGKSAKPRCFKNILSLPTDYAANKKAWMTGALFEQWLRKLDKKFELRNRQVLLLVDNCSAHNVD---IELKAIQLAFLPPNTTSVLQPMDQGVIKNMKTFYRRHLLERMI-LCSGNESPYNITLLTAMHMLVHAWD-QVTAATIANCFRHCGFDIASSEATADSTATADSGQDQDGEDIPASVRQALQDVDFTDYVDADKSAMVCG-ALTDEEIIAHVRG 467
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: T2M9D7 (Tigger transposable element-derived protein 4 (Fragment) OS=Hydra vulgaris OX=6087 GN=TIGD4 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 4.920e-48 Identity = 139/422 (32.94%), Postives = 214/422 (50.71%), Query Frame = 2 Query: 17 SIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIV--RLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGP---KKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFT--DYLDCDVNVV-CGDIMTD*DIIENV 1234 S K+VA+KY VP N LST KNK L N K K++ +GNF ++ A+ + + +PI+G +LKEK ++ AL F+AS+ W K+ NGI ++ + N+ WN+T L L+ YK +IFN DE GLF + HL +K K VR I G +KL +++ +P CFK++ LP K+WM +F +W+MKLD F Q+R+V F D+CSAH H++ L+NI L FFPPN T++LQPMD IR LK HY + ++ ++ +D E PKI++L+ +K + W+ + T+ CF+K+G + + ++ + E N + +E+ + Y+ D NVV G + TD +II + Sbjct: 28 SNKEVAKKYGVPKNALSTWVKNKTKLLTSLEKNGTKSKRKKLHSGNFKNIEKAIYTWFVAKISQQVPIDGTILKEKALKFAEALGELDFKASDCWFHNWKERS--NGISFKIISGESVAVTNNMTASWNETTLPTLLLNYKLENIFNADEFGLFYQCLPNKTYHLSREKSFKGKNSKVR------LTGIAAGSATGEKLPMFVIRKSKNPWCFKHIKQLPCTYKNQLKSWMTGGLFTEWVMKLDSFFRAQDRKVEFLVDNCSAH--PHIEG-LSNINLIFFPPNTTSVLQPMDQGVIRSLKAHYCHKIVHLCIKAVDNNEPMPKISILEAMKDLVSSWNA-VSKETVINCFKKAGISKTNKSIEEADDDHPFKFLTEELNRLRELDPRAVQEDLSAESYIGLDCNVVTTGSLATDAEIIAQI 437
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A1B6LVP4 (Uncharacterized protein OS=Graphocephala atropunctata OX=36148 GN=g.16406 PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 4.977e-48 Identity = 149/454 (32.82%), Postives = 227/454 (50.00%), Query Frame = 2 Query: 14 KSIKK---VAEKYVVPANTLSTISKNK-KIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISL-----RLISNFREEFTDYLDCDVNV-VCGDIMTD*DIIENV---QNQSMSISNMFEDSIGGEVDETNLSS 1312 K +KK +A+ + +P NTLST KNK KI + F KR+ VD+ V + +A + IP++G +++ K +Q+ L F+AS GWLDG K N I A+ + ++ AN+W K L+ +I+ +IFN DETGLF L +K + +++ G +KL ++ ASP CFKNV S PV+ + KAWM S +F+KWL+KLD FGK+ R+V F D+C+AH L + N+ + FFP N+T+++QPMD I+ LK YR+ +++ IL D K+ +L + + WD + P TIK CF+K+GF +EAT T I ++ + + D+L+ D +V VCG+I TD +II V + Q ++ G DET + S Sbjct: 29 KGVKKKSEIAKDFGIPPNTLSTFLKNKDKILSSA---QEFDKDRKRLREPENPAVDNCVLKWFKQARDKKIPLSGPLIRAKAEQFAKELGKKNFKASTGWLDGFKDR---NKITFKAVCGESGAVNQQEANQW-KQDLEEMIQDRDPKNIFNVDETGLFFKCTPDKTLAFKDEKCHGGKLSKERVTLLVGANMDGSEKLPLLMIGKSASPRCFKNVKSKPVEYVNSSKAWMTSDLFSKWLIKLDKRFGKEKRKVVLFIDNCTAHNTIPL---MENLKVVFFPANMTSVVQPMDQGIIKNLKHFYRSLLVENILT-SDGNALKIKLDILQASRMSKQAWD-KVKPETIKNCFKKAGFV----------KTDEESVEATATEGIPQVDGWEDVVPDPTISYEDFLNVDEDVAVCGEI-TDAEIIAEVLDSEKQDDDGDGSGDEIAGSSADETPVPS 459
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 51.6026 bits (122), Expect = 2.015e-7 Identity = 77/332 (23.19%), Postives = 132/332 (39.76%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIF---KNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALN-CDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLI-RIYKENDIFNGDETGLF---LNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLL---ASPHCFKN--VNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNRE-------V*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFID 928 ++ K++A ++ + T+ I K K+ VL + L K + F ++ AV + + +PI +ML E+ + + L + F AS GWL K+ I + + D A ++ +K L + ++ ETGL+ L A C +L+C G +L ++ A P F+N V+ LPV +R+AW+ + IF +W + V QN E D+ AH D +I + + PPNL L+P++ + LK YR V + + +D Sbjct: 23 GETAKQLALEFNLGHRTIYDIKKAKEKLWRLNKVLDVDTGLSYMKVIRESRFPQLEEAVYKWFRQHRAMGLPITSSMLIEQARHFHEHLGLTEPFAASAGWLRNFKRRY---CIGEVVVEKVSDDAAEALAARESFMKFLEEQGLSPQQVYAATETGLYWKSLPARTAAGNCRVGRDRIA------------LLLCASAAGTHRLPLAVVGRAAHPRVFRNLDVSLLPVHYYNHRRAWVTTDIFRRWFRERFVPEVTQNLEALGLPPKAVLLLDNSPAHPDDG-SLCCGDITVFYLPPNLAPALKPLEQGAVGHLKVLYRREVARGMALGVD 338
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003106.1 (pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 gene:ENSPMAG00000002845.1 transcript:ENSPMAT00000003106.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.9062 bits (115), Expect = 2.166e-6 Identity = 72/343 (20.99%), Postives = 129/343 (37.61%), Query Frame = 2 Query: 38 KYVVPANTLSTISKNK-KIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNC--------DTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDV----EFGKQNR---EV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKK------ENWPKITLLDFIKRISKIW 991 K +P T+ TI K+K +I + V P R G ++ + ++ + T +++P++ +++ K + L +TF+AS GW + K + + + R+ A D A +++T+ + + E G + C + P+ L + N+LPV N KA + +IF +W V E+ + N + D+ H ++ NI + F PN TALLQPMD + K +Y + + DK+ E W ++LD +K I+ W Sbjct: 39 KLELPRTTVVTILKDKARILEEVKGQAPMQAAYIRQRAGLIAEMEKHLIVWLDDQTRHHVPVSLAIIQAKARSLFEHLKARRGEGSQSETFQASKGWFNRFKSRFKFHEM-RVKGEAKSADVATAGDFSRTLAEII-------------EEGRY----------------------------C---ATENPRALKGY---------TKNTLPVIWKSNPKARVTGAIFEEWFRVYFVPAVKEYCRTNNLAFKAILVLDNAPCHPVS-VEGFDPNIKVVFLTPNTTALLQPMDQGVMSSFKAYYLRQTFAQAISATDKEGGPTLTEFWKGFSILDAVKNIAASW 326
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005921.1 (pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene:ENSPMAG00000005352.1 transcript:ENSPMAT00000005921.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.521 bits (114), Expect = 2.206e-6 Identity = 41/145 (28.28%), Postives = 65/145 (44.83%), Query Frame = 2 Query: 614 PHCFKNVN--SLPVD*DYNRKAWMNSSIFAKWLMKL---DVEFGKQNREV*F----FFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD----IRCLKDHYRNGVIKEILRFIDK------KENWPKITLLDFIKRISKIW 991 P FK ++ +LPV N AW+ +IF W + DVE ++ + F D+ +H HL NI + F PPN T++LQPMD +C K +Y + + L + +E W + ++ I+K W Sbjct: 191 PRAFKGISKATLPVYFRANPTAWVTVAIFEDWFINCFIPDVEKYCRDEGIPFKILLVIDNAPSH-PAHLDDFHPNIKVVFLPPNATSVLQPMDQGVNAKC-KAYYLRRTLAQALEATEGDTGKTVREFWEAYDVYQAVQNIAKAW 333
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006798.1 (pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 gene:ENSPMAG00000006139.1 transcript:ENSPMAT00000006798.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.1358 bits (113), Expect = 3.966e-6 Identity = 42/154 (27.27%), Postives = 66/154 (42.86%), Query Frame = 2 Query: 614 PHCFKNV--NSLPVD*DYNRKAWMNSSIFAKW-----LMKLDVEFGKQNR--EV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD----IRCLKDHYRNGVIKEILRFIDK------KENWPKITLLDFIKRISKIWDLDIFPTTI 1018 P K + N LPV N+ AWM I W L++ + K+N +V D+ + K HL + N+ + PPN +LLQP+D + K +Y I ++L D ++ W + D I I WD D+ +T+ Sbjct: 179 PRALKGLSRNMLPVHWTANKMAWMTGQIMEDWFTQHFLVESERYCRKENLAFKVLLILDNAPGYPK-HLANINPNVRVLLLPPNTASLLQPLDQGGVVSTFKAYYLRRTISQLLEGTDGPDKPTVRDCWKAYNIRDAINNIKSSWD-DVKQSTM 330
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004617.1 (pep scaffold:Pmarinus_7.0:GL477874:26927:28564:-1 gene:ENSPMAG00000004208.1 transcript:ENSPMAT00000004617.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 47.7506 bits (112), Expect = 4.615e-6 Identity = 80/362 (22.10%), Postives = 139/362 (38.40%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKN----KKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNC----------DTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLI--RIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC---QGPKKLNCWLLASPH---CFKNVNS--LPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNN---ILLEFFPPNLTA-LLQPMDIRCLKDHYRNGVIKEILRFIDKK-----ENWPKITLLDFIKRISKIW 991 +S++ +A Y + T+ I N K F + N + S N ++ F+ + + P++G ML EK K + L +TF AS GWL K E +GI RL++ G D + ++ + ++ + + I+N DETGLF + L K+ VL+C G +L L K+++ LPV RKAWM+ F W FF A R + + KL + ++++ P + + LQ D + K YR +++++L D+ +W +++ D + + W Sbjct: 24 GRSLQAIAADYNIGYTTVRDIRDNADKISKFFSELQSANATKKRKTTRSADNKELDAKLYEWFLQQRAQGH-PVSGPMLCEKAKVFSAKLRSRQEGGDEEEEETFMASQGWLRSFK---ERHGIRRLSVVGERHGSDVDAVREYIAR-FQAMVDDKGLCASQIYNADETGLFWKSLPSKTLASSSEVNAAGYKCSKEG--MTVLMCANASGTHRLKLTCLGKSKNLGALKDLSEDCLPVHYYGQRKAWMDQFTFKDW----------------FFTKFVPAVRDNLFREKLGSRAILVIDNAPAHPSGQTLQTQDGQLFKCLYRKELLRKLLDMEDEDPETLIRHWRALSIKDALFVAASAW 362
BLAST of Tigger transposable element derived 6 vs. Ensembl Yeast
Match: PDC2 (Transcription factor for thiamine-regulated genes; required for expression of the two isoforms of pyruvate decarboxylase (PDC1 and PDC5) along with thiamine biosynthetic genes; binds a DNA sequence in the PDC5 promoter; mutant fails to grow on 2% glucose and thus is scored as inviable under standard conditions [Source:SGD;Acc:S000002488]) HSP 1 Score: 36.1946 bits (82), Expect = 1.420e-7 Identity = 21/59 (35.59%), Postives = 31/59 (52.54%), Query Frame = 2 Query: 662 NRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPN 838 NRKAW+ S++F WL++ D NR++ D HR +L +L NI L + N Sbjct: 261 NRKAWLTSNLFHNWLVRWDKRLVAVNRKIWIVLDDSCCHRIINL--RLQNIKLVYTSSN 317 HSP 2 Score: 35.8094 bits (81), Expect = 1.420e-7 Identity = 21/64 (32.81%), Postives = 34/64 (53.12%), Query Frame = 1 Query: 463 RSFFKCLPGKS-FVLQE---------DSCQKGKDSKEK----ITIMLCANMSGTEKIKLLVIGK 612 +++F +P K F L E D Q S ++ T+MLC+N+ G+EK+K +V+GK Sbjct: 159 KAYFSKIPPKDLFTLDEAFLSYNLPLDYAQYEASSIQRRIEVATVMLCSNLDGSEKLKPVVVGK 222
BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Match: EDO44738 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUQ6]) HSP 1 Score: 103.219 bits (256), Expect = 4.024e-24 Identity = 99/361 (27.42%), Postives = 160/361 (44.32%), Query Frame = 2 Query: 11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAA-GCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLASPHCFKNVNS--LPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFF--PPNLTA-LLQPMD---IRCLKDHYRNGVIKEILRFID-------KKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045 KS +K+A+ Y + T+ I K K N + + + + ++ + I+G ML+EK + + L+ FRASNGWL+G ++ +GI A + NV +W + I++ + Y+ DI+N ETGL+ A +L + + R C + + K L A+P CF ++S LPV NR+AW+ +SIFA WL LD + +++R + F D+ H +L N+ L F P N T LQP+ + + YR V+ L +D K+ +IT LD I+ D +I +T+ CF +GF Sbjct: 22 TKSQRKLADIYQIGKTTVHEILKKKDDILKAYEQNVDGGRKRVCTRSAYSDINRLAWQWYERMRAQGNQISGPMLQEKARTFAAELDMKDFRASNGWLEGFRRR---HGISFGASFSGYETSVNVTTEWTEKIME-VTDGYRSTDIYNLVETGLYYRALPDKNLVPETESTSTERLTVTL---CCNMDGEFEKPLVIGPTANPPCFAKLDSECLPVIWRANRRAWITTSIFADWLRTLDRKMRQKDRRILLFLDNSPPHPPTL---QLTNVKLVFLIKPSNNTVNQLQPLTQGIVEAFRMAYRRKVLFSTLAKLDDSNSPRSAKQLMQEITELDACFWIAATLD-EISGSTMMNCFESAGF 371
BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Match: EDO40000 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8J7]) HSP 1 Score: 68.9366 bits (167), Expect = 4.322e-13 Identity = 61/247 (24.70%), Postives = 104/247 (42.11%), Query Frame = 2 Query: 125 IKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQY---VLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAW-MNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPN 838 ++ + GN D+ + A+ + +PI+G +LKE + ++++ F SNGW+D KK + ++ C + W ++ L L+ Y D+F+ DE GLF A ++ HL + K VR +KL +++ P CF V +LP +K W ++S++F +W+ + D F + R V D+ AH S I L PP Sbjct: 20 LRQRLTPCGNEDL-EKALYTWSVRMKQQGVPISGPVLKETAIHFANELISIVLSGFVGSNGWIDRWKKRQD-VAFKTVSGEILSCTLEMTASWEESTLPTLLSKYALEDMFDADEFGLFYKALPDKLMHLKLQSCVGGKQSKVRLTG---LAAASSSGEKLPMFVIGKSQKPRCFSGVRNLPCRYRAPKKGWILDSNLFEEWVREQDRSFERPGRNVALVVDNGPAH---PTVSNFKAIDLILLPPT 258
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000062480.1 (SMESG000062480.1) HSP 1 Score: 154.451 bits (389), Expect = 2.300e-42 Identity = 74/85 (87.06%), Postives = 83/85 (97.65%), Query Frame = 2 Query: 1154 EFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFL 1408 EFTDYLDCDVNVVCGDI+TD DIIENVQNQSMSISN+ ED+IGG++DETNLSS+FSF+TNSEMIDCIQKLRNGML++SSVPQRFL Sbjct: 249 EFTDYLDCDVNVVCGDIVTDEDIIENVQNQSMSISNISEDNIGGKMDETNLSSKFSFMTNSEMIDCIQKLRNGMLRRSSVPQRFL 333
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000011946.1 (SMESG000011946.1) HSP 1 Score: 131.339 bits (329), Expect = 4.832e-38 Identity = 88/105 (83.81%), Postives = 91/105 (86.67%), Query Frame = 2 Query: 992 DLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNL 1306 D DI P TIK CFR+SGFYDDDFN+D DNIPLINIIE TE NYISLRLISNFREEFTDYLDCDVNVVCGDIM D D IENVQNQSMSISN+ EDSI EVDET L Sbjct: 91 DSDISPITIKNCFRQSGFYDDDFNNDYDNIPLINIIEVTEINYISLRLISNFREEFTDYLDCDVNVVCGDIMEDEDFIENVQNQSMSISNISEDSIDREVDETKL 195 HSP 2 Score: 46.2098 bits (108), Expect = 4.832e-38 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 1342 DRLYSKIKKWNVTAIFCTTKIF 1407 DRLYSK+KKWNVTAIFCT KIF Sbjct: 197 DRLYSKVKKWNVTAIFCTIKIF 218
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000059729.1 (SMESG000059729.1) HSP 1 Score: 133.65 bits (335), Expect = 1.746e-36 Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 2 Query: 1148 REEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGML 1378 +EEFTDYL CDVNVVCGDIMTD DIIEN+Q QSMSISN+ EDSIGGEVDETNLSSEFSFVTN EMID IQKLRNG+L Sbjct: 103 KEEFTDYLHCDVNVVCGDIMTDEDIIENLQIQSMSISNISEDSIGGEVDETNLSSEFSFVTNLEMIDFIQKLRNGIL 179 HSP 2 Score: 124.79 bits (312), Expect = 3.308e-33 Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 14 KSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVK-QYVLALNCD 277 +SIKKVAEKYVV ANT+STI KNK+ KNVLRDNP LIK KRM DMVDSAVSCFVSEA NNNIPINGNMLKEK K ++ L+CD Sbjct: 26 QSIKKVAEKYVVSANTVSTIRKNKEKLKNVLRDNPLLIK-KRMKAEKLDMVDSAVSCFVSEARNNNIPINGNMLKEKAKEEFTDYLHCD 113
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000062480.1 (SMESG000062480.1) HSP 1 Score: 101.679 bits (252), Expect = 1.076e-23 Identity = 48/57 (84.21%), Postives = 56/57 (98.25%), Query Frame = 2 Query: 1238 NQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFL 1408 NQSMSISN+ ED+IGG++DETNLSS+FSF+TNSEMIDCIQKLRNGML++SSVPQRFL Sbjct: 249 NQSMSISNISEDNIGGKMDETNLSSKFSFMTNSEMIDCIQKLRNGMLRRSSVPQRFL 305
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000036624.1 (SMESG000036624.1) HSP 1 Score: 83.5741 bits (205), Expect = 4.471e-18 Identity = 68/215 (31.63%), Postives = 110/215 (51.16%), Query Frame = 2 Query: 677 MNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRIS---------KIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQ--NQSMSISNMFEDSI 1279 M + +A L+K D+E G NR + F D+ + H+ +K +L NI LEF PPN T+L+QP+D IR +K H R +++++L+ I++ +++DF K I + W L + P TI+ CFRK+GF P N + + +++ L +E ++DCD V C D TD +I E V+ Q+ N ED++ Sbjct: 1 MTNRFWADSLLKFDLELG--NRNIILFADNVACHK---VKRQLKNIKLEFIPPNTTSLIQPLDQGTIRTVKVHCRMQLMRQMLQAIEE-----GCSIIDFAKSIDVLVALYMLKQAW-LLVSPATIQYCFRKAGF--------PTVHPDDNEDDLLQIPAVTVELGEAATQET--FVDCDNKVSCHDTSTDAEICEQVRRNRQNWDDDNDTEDAV 194 The following BLAST results are available for this feature:
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Tigger transposable element derived 6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Tigger transposable element derived 6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Tigger transposable element derived 6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Tigger transposable element derived 6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Tigger transposable element derived 6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30021171 ID=SMED30021171|Name=Tigger transposable element derived 6|organism=Schmidtea mediterranea sexual|type=transcript|length=1511bpback to top protein sequence of SMED30021171-orf-1 >SMED30021171-orf-1 ID=SMED30021171-orf-1|Name=SMED30021171-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=119bp MDIRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|