Tigger transposable element derived 6

Overview
NameTigger transposable element derived 6
Smed IDSMED30021171
Length (bp)1511
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Tigger transposable element derived 6 (SMED30021171) t-SNE clustered cells

Violin plots show distribution of expression levels for Tigger transposable element derived 6 (SMED30021171) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Tigger transposable element derived 6 (SMED30021171) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Tigger transposable element derived 6 (SMED30021171) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30021171

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parenchymaSMED30021171 dd_Smed_v4_29071_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD6 (tigger transposable element derived 6 [Source:HGNC Symbol;Acc:HGNC:18332])

HSP 1 Score: 169.474 bits (428), Expect = 6.336e-46
Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 
Query:   29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369
            VA+++ +  +TLST  K++  F+  +R+     + KRM +  +D +D AV  +  E    NI + G+++++K       L  D F+AS GWL+  +     +GI   A         M+  G DK   N+W+   +  LI  Y  +DIFN DETG+F      + L  K    +  +  +++    F     G +K+   ++   ASPHC KN++SLP D   N+ AWM   +F +WLM++D    +  R +    D+CSAH   ++   L  I + + P N TA+LQP++   I  +K  Y++ ++K+IL  ++  E+  ++ +   I  I+  W   + P+T+  C++K+G    +F + D          A E  + ++ + +    E  F D++  D +++   I  D DII+++    ++  N  E    G  DE  +S  E   VT +E I  +QKLR 
Sbjct:   33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD6 (tigger transposable element derived 6 [Source:HGNC Symbol;Acc:HGNC:18332])

HSP 1 Score: 169.474 bits (428), Expect = 6.336e-46
Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 
Query:   29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369
            VA+++ +  +TLST  K++  F+  +R+     + KRM +  +D +D AV  +  E    NI + G+++++K       L  D F+AS GWL+  +     +GI   A         M+  G DK   N+W+   +  LI  Y  +DIFN DETG+F      + L  K    +  +  +++    F     G +K+   ++   ASPHC KN++SLP D   N+ AWM   +F +WLM++D    +  R +    D+CSAH   ++   L  I + + P N TA+LQP++   I  +K  Y++ ++K+IL  ++  E+  ++ +   I  I+  W   + P+T+  C++K+G    +F + D          A E  + ++ + +    E  F D++  D +++   I  D DII+++    ++  N  E    G  DE  +S  E   VT +E I  +QKLR 
Sbjct:   33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD4 (tigger transposable element derived 4 [Source:HGNC Symbol;Acc:HGNC:18335])

HSP 1 Score: 139.428 bits (350), Expect = 3.089e-35
Identity = 106/353 (30.03%), Postives = 166/353 (47.03%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
             K   ++A +Y +  N+LS+I KNK           F  K KR+ T  +  ++ A+  +   A   N+P+NG ML+ K   +   L  + F+ SNGWLD  K      G+V  A  + A G   + +  W + +L   +  Y   ++FN  ETGL       N   +K       +  + +          G +KL   ++    +PHCFK + SLPV  + NR AWM S +F +W+ KLD EF  Q R V  F +S  AH +      L +I L FFP  L++    M    I+ LK  YR+ +IK+ L  ++  + +   +LLD +  +   W   + P TI   + ++GF
Sbjct:   36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPE---VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: CENPB (centromere protein B [Source:HGNC Symbol;Acc:HGNC:1852])

HSP 1 Score: 91.2781 bits (225), Expect = 7.715e-19
Identity = 86/382 (22.51%), Postives = 158/382 (41.36%), Query Frame = 2 
Query:    8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMST---GNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
            P+    ++A ++ +P +TLSTI KNK+    +  +  + + S    T     +D ++  +  +  +     +P+ G +LKEK  +    L  D F ASNGWLD  ++    +G+V  +                         +         W     +P  +   Y   D+F+  ET L+ +    +   LC      ++A           VL+C    G +KL   +    A P   +    LP D   N K  + +   AK+L  LD     ++R V       +A   D   S L ++ L FFPP     L+   ++ +K HYR  ++ + +  ++ ++ +  ++ L + +  ++  W   + P+ I  CFR++GF
Sbjct:   24 PDLRKGEIARRFNIPPSTLSTILKNKRAI--LASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWRAREEQPPSVAEGYASQDVFSATETSLWYDFLPDQAAGLCGGDGRPRQATQRLS------VLLCANADGSEKLPPLVAGKSAKPRAGQ--AGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLTEALHFVAAAWQA-VEPSDIAACFREAGF 389
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Match: TIGD2 (tigger transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:18333])

HSP 1 Score: 88.9669 bits (219), Expect = 3.498e-18
Identity = 90/374 (24.06%), Postives = 172/374 (45.99%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKKI---FKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKE---------NDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC----QGPKKLNCWLLAS---PHCFK--NVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQN-------REV*FFFDSCSAH-RKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRK 1036
            S KK++  Y +  +T+  I KNK+    + N       + K K M +  ++ +D  +  + ++   + IP++G +  ++ K +  AL  +  F AS+GWL   K+    +GI +    AAG  K    K ++T  +     ++E           I+  D+TGLF        L  +           ++     +++C     G  KLN  ++     P  FK  ++++LPV     + AW+  S+F +W  K  V   +++        +     D   A   ++ L S    I++++ PPN+T+L+QPM    +  +K +YR G++++ +    D K  W  +T+LD I  +S+ W++ +  +TI   ++K
Sbjct:   27 SFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNASSGWLTRFKQR---HGIPK----AAG--KGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGADQTGLFWKCLPSRTLTLETDQSTSGCRSSRER---IIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGNDPKIFWKNLTVLDAIYEVSRAWNM-VKSSTITKAWKK 387

HSP 2 Score: 50.0618 bits (118), Expect = 7.377e-6
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 1 
Query:  469 FFKCLPGKSFVLQEDSCQKG-KDSKEKITIMLCANMSGTEKIKLLVIGKS 615
            F+KCLP ++  L+ D    G + S+E+I IM CAN +G  K+ L V+GK+
Sbjct:  182 FWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKA 231
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Match: cag (gene:FBgn0017414 transcript:FBtr0331937)

HSP 1 Score: 48.521 bits (114), Expect = 4.293e-6
Identity = 30/111 (27.03%), Postives = 53/111 (47.75%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKKIFK----------NVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKK 319
            S++ +A+++ +     + I K+K+  K          N +R NP   +  ++    FD        + S     NIPI+G M+++K KQ  + L    F AS+GWL+  +K
Sbjct:   31 SVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNPLSQRGAQIDEMCFD--------WFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRK 133
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Match: cag (gene:FBgn0017414 transcript:FBtr0088239)

HSP 1 Score: 48.521 bits (114), Expect = 4.293e-6
Identity = 30/111 (27.03%), Postives = 53/111 (47.75%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKKIFK----------NVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKK 319
            S++ +A+++ +     + I K+K+  K          N +R NP   +  ++    FD        + S     NIPI+G M+++K KQ  + L    F AS+GWL+  +K
Sbjct:   31 SVRDLAKRFNIGKTQAADILKHKQSIKEGLLSGELKLNQMRRNPLSQRGAQIDEMCFD--------WFSRVRTENIPISGEMVRKKAKQLAVELGHSNFSASSGWLEKWRK 133
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Match: ENSXETT00000046714.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460367.1:582927:585046:-1 gene:ENSXETG00000018570.1 transcript:ENSXETT00000046714.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 110.153 bits (274), Expect = 1.925e-25
Identity = 78/273 (28.57%), Postives = 125/273 (45.79%), Query Frame = 2 
Query:   29 VAEKYVVPANTLSTISKNKKIFKNVL-RDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLAS---PHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFF 829
            +A++  +P +TL TI K +   +    +  P   K K ++   ++ ++  +  + +    +N+PI+G ML+EK       L  D F ASNGW+D  KK      +V  A+   +   D +    W    L   +  Y+  +IFN DETGLF N       C++       +  + +    F     G +KL   ++     P CFKNVN+LP +   N KAWM + +F + +  LD     Q  ++  F D C AH        L+N+ L FF
Sbjct:   33 LAKELGIPVSTLGTIIKQRASTEGSADKCGPQAKKRKYVTQSKYEQMEKLLQEWFAGLHASNVPISGIMLREKAVHIATRLGIDNFTASNGWIDRFKKRY---NVVYKAVCGESKSVDIDTVTNWKTNQLPCYLEGYELKNIFNTDETGLFFNVLPGKTFCFRGEDCHGGKLSKLRLTVLFTTNADGSEKLKPLVIGKSVKPRCFKNVNTLPTNYTANTKAWMTTKLFEEQMHLLDNRMRLQKHKILLFLDRCPAHPP---SLHLHNVKLVFF 299

HSP 2 Score: 53.1434 bits (126), Expect = 6.683e-7
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 1 
Query:  469 FFKCLPGKSFVLQEDSCQKGKDSKEKITIMLCANMSGTEKIKLLVIGKS 615
            FF  LPGK+F  + + C  GK SK ++T++   N  G+EK+K LVIGKS
Sbjct:  180 FFNVLPGKTFCFRGEDCHGGKLSKLRLTVLFTTNADGSEKLKPLVIGKS 228
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042])

HSP 1 Score: 51.6026 bits (122), Expect = 2.481e-6
Identity = 72/338 (21.30%), Postives = 138/338 (40.83%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIF---------KNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHA--AGCDKNVANKWNKTILKPLIRIY-KENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGK---------QNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDK 931
              S+K + +KY +  +T+  + K K             +++ D   L ++K +S      VD  +  ++ +    N P++ +++  + K++ + LN  T    S+GW    KK    NG+  L+++   A  + NVA+ + K + K +   +     ++N  +  LF        +   +          K+     VL C    G  K    ++    +P  FK V   PV    N++A +   IF  W     V   +         Q+ +V    D C  H       K +N+     PP+ T+ +QP+D   +R  K +Y++  ++ +L   +K
Sbjct:  202 GASVKSLCDKYGIGTSTIYDLKKQKDKLLTFYSNSDAPDLMADRKTLHQAKNVS------VDKVLMEWIRQRRRENFPLSRSLIMAQAKKFHVLLNISTPCEYSSGWYGKFKKR---NGLSILSINGEKASEEYNVADNFVKKLNKLVSDEHLSAEQVYNAAKASLFWRHLPQKLVATAQKPPSSGLEDPKER--LTVLACSNAAGTHKARLLVIGKSRNPRAFKGVRVFPVTYTANKQAGITREIFQDWFENHFVPEARAHCMSVGLSQDAKVMLILDHCPTHPSAEFLVK-DNVFAVCLPPDCTSFIQPLDQGILRLFKSNYKSEFLQRMLTECNK 527
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Tigd4 (tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264])

HSP 1 Score: 146.362 bits (368), Expect = 8.248e-38
Identity = 106/353 (30.03%), Postives = 168/353 (47.59%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
             K   ++A +Y +  N+LS+I KNK           F  K KR+ T  +  ++ A+  +   A   N+P+NG ML+ K   +   L  + F+ SNGWLD  K      G+V  A  + A G   + +  W + +L   +  Y   ++FN  ETGL       N   +K       +  + +          G +KL   ++    +P CFK + SLPV  + NR AWM ++IF +W+ KLD +F  Q R V  F DSC AH +      L +I L FFP  L++    M+   I+ LK  YR+ +IK+ L  ++  + +   +LLD +  +   W   + P TI   + ++GF
Sbjct:   36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGISIDPSTVWYQNVLPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLALGTNMDGSEKLPLLIIGKNRAPRCFKGIKSLPVYYEANRTAWMTAAIFEQWMQKLDEKFQAQKRRVVIFVDSCPAHPE---VKNLKSIELAFFPSCLSSGFAAMNQGVIKSLKIKYRHCLIKKFLSSVESSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Cenpb (centromere protein B [Source:MGI Symbol;Acc:MGI:88376])

HSP 1 Score: 93.2041 bits (230), Expect = 1.282e-19
Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 2 
Query:    8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLI---KSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA-----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
            P+    ++A ++ +P +TLSTI KNK+      R         K+ ++S   +D ++  +  +  +     +P+ G +LKEK  +    L  D F ASNGWLD  ++    +G+V  +                       + + G   +    W+    +P  +   Y   D+F+  ET L+ + F  +           AR   ++     VL+C    G +KL   +   S         LP D   N K  + +   AK+L  LD     ++R V       +A   D   S L ++ L FFPP     L+   ++ +K HYR  ++ + +  ++ ++ +  ++ L++ +  ++  W   + P+ I TCFR++GF
Sbjct:   24 PDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSP--YDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVACSGVTRSRARSSAPRAPAAPAGPATVPSEGSGGSTPG-WHTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGPARQATQR---LSVLLCANADGSEKLPPLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPSDIATCFREAGF 389
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390])

HSP 1 Score: 90.5077 bits (223), Expect = 7.696e-19
Identity = 93/375 (24.80%), Postives = 168/375 (44.80%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKKI---FKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKE---------NDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC----QGPKKLNCWLLAS---PHCFK--NVNSLPVD*DYNRKAWMNSSIFAKWLMKLDV--------EFGKQNREV*FFFDSCSAHRKDHL-KSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRK 1036
            S KK++  Y +  +T+  I KNK+    + N       + K K M +  ++ +D  +  + ++   + IP++G +  ++ + +  AL  +  F AS+GWL   K+    +GI +    AAG  K    K ++T        ++E           I+  D+TGLF        L +            ++     +++C     G  KLN  ++     P  FK  ++++LPV     + AW+  S+  +W  K  V          G + + V    D  +AH  + L  S    I++++ PPN+T+L+QPM    +  +K +YR G+I++ +    D K  W  +T+LD I   S+ W+  I   TI   ++K
Sbjct:   27 SFKKLSVLYGIGESTVRDIKKNKERIINYANSSDPTSGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQARFFFDALGMEGDFNASSGWLTRFKQR---HGIPK----AAG--KGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQSTCEYRTSRER---IIIMCCANATGSHKLNLCVVGKAKRPRAFKGTDLSNLPVTYFSQKSAWIEPSVLKQWFEKCFVPQVQKHLKSKGLREKAV-LLLDFPAAHPAEELLSSDDGRIIVKYLPPNVTSLIQPMSQGVLTTVKRYYRAGLIQKYMDEGNDPKTFWKNLTVLDAIYEASRAWN-QIRSNTITRAWKK 387
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782])

HSP 1 Score: 82.4185 bits (202), Expect = 3.060e-16
Identity = 117/501 (23.35%), Postives = 208/501 (41.52%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKK---IFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDT-FRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWN-------KTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLAS---PHCFKNVNSL--PVD*DYNRKAWMNSSIFAKWLMKLDV----EF----GKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEIL-RFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFR-EEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFLIRSMK 1423
            S K++A  Y +   T+  I KNK+    + +       L K K M    ++ +D A+  + ++      PI+G +  ++ + +  AL  D  F  S GWL   K+      I        G +  V +  N       +  L+P         I+N DETGLF           K         + ++     V+ C    G  KL   ++     P  FK+ ++L  PV     + AWM+ SIF +W  K+ V    E+    G Q + V    +S +   ++ L+S    I  ++ PPN+ +L+QP+    I  +K +YR G++   L    D K  W K+TLLD +  I+  W+L + P TI   +++          +  +           T     + + N   E    +L+ D      +++TD +II   Q Q+   S   E+ I   + E +++   +      ++D +++  + +L     P R +IR ++
Sbjct:   27 SSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSLLAKRKSMKPSMYEELDKAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQP-------EQIYNADETGLFWKCLPSRTTVIKGKCTVPGHNLGEER--ITVMCCTNATGLHKLKLCVVGKARKPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPLGQGVIAAMKRNYRAGLLHNNLEEGNDLKSFWKKLTLLDALYEIAMAWNL-VKPVTISRAWKQ--ILPAIEEKEGLDFDEDISGATVATILQHTKGLENVTPENLEKWLEIDSTEPGYEVLTDSEIIRRAQGQTDESSENDEERI-ELIPEKHINHTTALQWTENLLDYLEQQGDMIL-----PDRLVIRKLR 509
[Close]
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q17RP2|TIGD6_HUMAN (Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 3.043e-45
Identity = 133/465 (28.60%), Postives = 230/465 (49.46%), Query Frame = 2 
Query:   29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA---------MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREE--FTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLS-SEFSFVTNSEMIDCIQKLRN 1369
            VA+++ +  +TLST  K++  F+  +R+     + KRM +  +D +D AV  +  E    NI + G+++++K       L  D F+AS GWL+  +     +GI   A         M+  G DK   N+W+   +  LI  Y  +DIFN DETG+F      + L  K    +  +  +++    F     G +K+   ++   ASPHC KN++SLP D   N+ AWM   +F +WLM++D    +  R +    D+CSAH   ++   L  I + + P N TA+LQP++   I  +K  Y++ ++K+IL  ++  E+  ++ +   I  I+  W   + P+T+  C++K+G    +F + D          A E  + ++ + +    E  F D++  D +++   I  D DII+++    ++  N  E    G  DE  +S  E   VT +E I  +QKLR 
Sbjct:   33 VAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRFRDR---HGIALKAVCREDSDRLMNGLGIDK--INEWHAGEIIKLIADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAH---NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW-WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLI---ISQDTDIIQDM----VAGENTSE---AGSEDEGEVSLPEQPKVTITEAISSVQKLRQ 478
[Close]
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q8BUZ3|TIGD4_MOUSE (Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.769e-37
Identity = 106/353 (30.03%), Postives = 168/353 (47.59%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
             K   ++A +Y +  N+LS+I KNK           F  K KR+ T  +  ++ A+  +   A   N+P+NG ML+ K   +   L  + F+ SNGWLD  K      G+V  A  + A G   + +  W + +L   +  Y   ++FN  ETGL       N   +K       +  + +          G +KL   ++    +P CFK + SLPV  + NR AWM ++IF +W+ KLD +F  Q R V  F DSC AH +      L +I L FFP  L++    M+   I+ LK  YR+ +IK+ L  ++  + +   +LLD +  +   W   + P TI   + ++GF
Sbjct:   36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGISIDPSTVWYQNVLPYYLNDYHPKNVFNVKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLALGTNMDGSEKLPLLIIGKNRAPRCFKGIKSLPVYYEANRTAWMTAAIFEQWMQKLDEKFQAQKRRVVIFVDSCPAHPE---VKNLKSIELAFFPSCLSSGFAAMNQGVIKSLKIKYRHCLIKKFLSSVESSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
[Close]
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|Q8IY51|TIGD4_HUMAN (Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.484e-34
Identity = 106/353 (30.03%), Postives = 166/353 (47.03%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA--MHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
             K   ++A +Y +  N+LS+I KNK           F  K KR+ T  +  ++ A+  +   A   N+P+NG ML+ K   +   L  + F+ SNGWLD  K      G+V  A  + A G   + +  W + +L   +  Y   ++FN  ETGL       N   +K       +  + +          G +KL   ++    +PHCFK + SLPV  + NR AWM S +F +W+ KLD EF  Q R V  F +S  AH +      L +I L FFP  L++    M    I+ LK  YR+ +IK+ L  ++  + +   +LLD +  +   W   + P TI   + ++GF
Sbjct:   36 GKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRY---GLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPE---VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF-TFSLLDAVDTLHLCWRA-VTPETIVKSYEEAGF 380
[Close]
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|P48988|CENPB_CRIGR (Major centromere autoantigen B OS=Cricetulus griseus OX=10029 GN=CENPB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.958e-19
Identity = 88/376 (23.40%), Postives = 162/376 (43.09%), Query Frame = 2 
Query:    8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGN---FDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKE---ME*NGIVR-----------------LAMHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
            P+    ++A ++ +P +TLSTI KNK+    +  +  + + S    T     +D ++  +  +  +     +P+ G +LKEK  +    L  D F ASNGWLD  ++    +  +G+ R                  A+ + G   +    W     +P  +   Y   D+F+  ET L+ + F  +           AR   ++     VL+C    G +KL   +   S     +   LP D   N K  + +   AK+L  LD     ++R V       +A   D   S L ++ L FFPP     L+   ++ +K HYR  ++ + +  ++ ++ +  ++ L++ +  ++  W   + P  I TCFR++GF
Sbjct:   24 PDLRKGEIARRFNIPPSTLSTILKNKRAI--LASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRHGVVACSGVTRSRARTSTPRAPAAPAGPAAVPSEGSGGSTPG-WRTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGTARQATQR---LSVLLCANRDGSEKLPPLVAGKSAKPRASQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPADIATCFREAGF 389
[Close]
BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Match: sp|P27790|CENPB_MOUSE (Major centromere autoantigen B OS=Mus musculus OX=10090 GN=Cenpb PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 8.965e-19
Identity = 88/379 (23.22%), Postives = 162/379 (42.74%), Query Frame = 2 
Query:    8 PNKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLI---KSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLA-----------------------MHAAGCDKNVANKWNKTILKP--LIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA-SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKDHYRNGVIKEILRFIDKKE-NWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
            P+    ++A ++ +P +TLSTI KNK+      R         K+ ++S   +D ++  +  +  +     +P+ G +LKEK  +    L  D F ASNGWLD  ++    +G+V  +                       + + G   +    W+    +P  +   Y   D+F+  ET L+ + F  +           AR   ++     VL+C    G +KL   +   S         LP D   N K  + +   AK+L  LD     ++R V       +A   D   S L ++ L FFPP     L+   ++ +K HYR  ++ + +  ++ ++ +  ++ L++ +  ++  W   + P+ I TCFR++GF
Sbjct:   24 PDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSP--YDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR---HGVVACSGVTRSRARSSAPRAPAAPAGPATVPSEGSGGSTPG-WHTREEQPPSVAEGYASQDVFSATETSLWYD-FLSDQASGLWGGDGPARQATQR---LSVLLCANADGSEKLPPLVAGKSAKPRAGQGGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLAAQSLD--TSGLRHVQLAFFPPGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGLQLGLVEALHFVAAAWQA-VEPSDIATCFREAGF 389
[Close]
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A1E1X420 (Putative tigger transposable element-derived (Fragment) OS=Amblyomma aureolatum OX=187763 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.651e-53
Identity = 133/465 (28.60%), Postives = 231/465 (49.68%), Query Frame = 2 
Query:   29 VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMDIRCLKD---HYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXX------XXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQS 1387
            VA+ + +PA++LSTI   ++               KR+  G F  VD AV+ ++ +  + NIP++G M++EK  ++    +   F AS+GWL   +      G  +++  A   D   A+ W +  L+ +I  Y  +D++N DETG+F        +C+K  A K  +  + +    F     G  K+   ++   A P CFK + SLP D  +N KAWM+  +F KW++ ++ E  K+NR++    D+CSAH  D   ++L+NI +EF PPN T++LQP+D+  +K+   HYR+ +++ IL  +  ++  P I +    + ++  W   + PTTI  C++K+G             ++++N       E  +   +S RL ++    F DY  CD  V     +T  DI+ +   Q        E+S  G   E  +S++ + V       C++KL+    QQ+
Sbjct:   31 VAKAFGIPASSLSTIKSQRQAIAAASESAQLGPARKRLCAGYFSKVDEAVATWLKDLRSRNIPVSGPMIQEKAVEFAALFSVTGFEASSGWLHRFRARYG-IGWKQVSGEARSADTAAASTWREEKLRDVISAYSPDDVYNADETGVFYQLLPDKTMCFKDDACKGGKHSKVRITALFCCNASGTHKMKPLIIGRYARPRCFKGLASLPCDYAHNSKAWMSRDLFTKWIVGVNNEMAKKNRKILLILDNCSAHLVD---TRLSNIRVEFLPPNCTSILQPLDLGIIKNVKVHYRHRLVQRILINLRMQKREP-INVRQAAEMLTGAW-WTVKPTTIVNCWQKAGLNAANWTAVDASPEEEENDSDEGSTEPGDWKELSERLGTDSPLPFEDYACCDSQVETCATLTTEDIVASALPQEQEEEEEEEESTEGAPTEEKISAKEALV-------CLEKLKTFAAQQT 482
[Close]
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A2S2QVQ0 (Tigger transposable element-derived protein 4 OS=Sipha flava OX=143950 GN=Tigd4_8 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.476e-52
Identity = 147/479 (30.69%), Postives = 236/479 (49.27%), Query Frame = 2 
Query:   11 NKSIKK--VAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNV------ANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVP 1396
            +K IKK  +AE+Y +P ++LSTI KN++     +  N  L   KR+    ++ VD AV  +++   N N+PI+  ++K+K   +   L  D FRAS+GWLD  K            M    C K+V      ++ W   IL  LI  +   DIFN DETGLF        L +K       +  +++     +L+C    G +K    ++    +P CFK + SL  + D+N+KAWM S+IF KWL+ +D +     R++  F  +C+AH +  L  KL +I L +FP N++  LQPM+   I  LK +YR  ++ ++   I   +N   ITL D I  +SK W  D+    IK CF ++GF       D     +    +  + N ++L+          DYL  D ++   +   D DI+E+V+ +  S  + +E       DE   + E   +T  E+++    +RNG+ QQ ++P
Sbjct:   20 DKGIKKKDIAERYGIPTSSLSTILKNRENIIRQVESNNLLKNRKRIKVCVYEKVDKAVLKWIACKQNYNLPISNMLIKKKAIHFAQKLGFDDFRASSGWLDKFKSRHN-------IMFKVICGKSVDISEEDSDLWKSNILPKLIEKFDPKDIFNADETGLFFKCLPNQTLDFKHEKCFSGKRSKERIT---LLVCSNMTGTEKQKLLIIGENKNPRCFKGIKSLETNYDFNKKAWMTSNIFEKWLLDIDRKMSLDKRKIILFVRNCTAHPR-TLCLKLKSITLAYFPSNISK-LQPMNQGIINNLKVYYRKRILNKV---ISNNKNNITITLRDCISEVSKAWSNDVASEIIKKCFSRAGFKKMFIKTDVKVPDVQQEWDIDQCNDMTLQ----------DYLKIDEDITVYESPIDDDIVEDVKKKENSGEDRYE-------DENESAEELPKLTEEEILNAFSVVRNGLRQQVNIP 466
[Close]
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A4D5RER3 (Putative tigger transposable element-derived (Fragment) OS=Ixodes scapularis OX=6945 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.012e-49
Identity = 130/420 (30.95%), Postives = 208/420 (49.52%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVAN--KWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFRE-EFTDYLDCDVN-VVCGDIMTD*DIIENVQN 1240
            N S + +A+K+ +P +TLST  +NKK   +      F    KR+    +  ++ A+  ++ +  + N+P++G+++  K   + L L  D F AS GW    +   E + +V  A+   G D N+     W    L+  +R Y   DIFN DET LF        + YK       +  +++          G +KL  +++   A P CFKN+ SLP D   N+KAWM  ++F +WL KLD +F  +NR+V    D+CSAH  D    +L  I L F PPN T++LQPMD   I+ +K  YR  +++ ++      E+   ITLL  +  +   WD  +   TI  CFR  GF         D+    +  +  +   I   +    ++ +FTDY+D D + +VCG  +TD +II +V+ 
Sbjct:   57 NASKQDIAKKFGIPRSTLSTYIRNKKAIVDAYEVEAFSGDRKRLRPAKYPDLEKALVTWIKDMRSLNLPLSGSVIMAKAADFALRLEHDDFAASEGWFHRFR---ERHDLVFRAVSGEGQDTNMETCAMWKSGALQDYLRSYSPCDIFNADETALFFKLLPNKTITYKGDNCAGGKRSKERVTVMLAANMTGTEKLPIFVIGKSAKPRCFKNILSLPTDYAANKKAWMTGALFEQWLRKLDKKFELRNRQVLLLVDNCSAHNVD---IELKAIQLAFLPPNTTSVLQPMDQGVIKNMKTFYRRHLLERMI-LCSGNESPYNITLLTAMHMLVHAWD-QVTAATIANCFRHCGFDIASSEATADSTATADSGQDQDGEDIPASVRQALQDVDFTDYVDADKSAMVCG-ALTDEEIIAHVRG 467
[Close]
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: T2M9D7 (Tigger transposable element-derived protein 4 (Fragment) OS=Hydra vulgaris OX=6087 GN=TIGD4 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.920e-48
Identity = 139/422 (32.94%), Postives = 214/422 (50.71%), Query Frame = 2 
Query:   17 SIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIV--RLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGP---KKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFT--DYLDCDVNVV-CGDIMTD*DIIENV 1234
            S K+VA+KY VP N LST  KNK      L  N    K K++ +GNF  ++ A+  +     +  +PI+G +LKEK  ++  AL    F+AS+ W    K+    NGI    ++  +     N+   WN+T L  L+  YK  +IFN DE GLF      +  HL  +K    K   VR         I  G    +KL  +++    +P CFK++  LP       K+WM   +F +W+MKLD  F  Q+R+V F  D+CSAH   H++  L+NI L FFPPN T++LQPMD   IR LK HY + ++   ++ +D  E  PKI++L+ +K +   W+  +   T+  CF+K+G    + + ++ +          E N +        +E+ +   Y+  D NVV  G + TD +II  +
Sbjct:   28 SNKEVAKKYGVPKNALSTWVKNKTKLLTSLEKNGTKSKRKKLHSGNFKNIEKAIYTWFVAKISQQVPIDGTILKEKALKFAEALGELDFKASDCWFHNWKERS--NGISFKIISGESVAVTNNMTASWNETTLPTLLLNYKLENIFNADEFGLFYQCLPNKTYHLSREKSFKGKNSKVR------LTGIAAGSATGEKLPMFVIRKSKNPWCFKHIKQLPCTYKNQLKSWMTGGLFTEWVMKLDSFFRAQDRKVEFLVDNCSAH--PHIEG-LSNINLIFFPPNTTSVLQPMDQGVIRSLKAHYCHKIVHLCIKAVDNNEPMPKISILEAMKDLVSSWNA-VSKETVINCFKKAGISKTNKSIEEADDDHPFKFLTEELNRLRELDPRAVQEDLSAESYIGLDCNVVTTGSLATDAEIIAQI 437
[Close]
BLAST of Tigger transposable element derived 6 vs. TrEMBL
Match: A0A1B6LVP4 (Uncharacterized protein OS=Graphocephala atropunctata OX=36148 GN=g.16406 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.977e-48
Identity = 149/454 (32.82%), Postives = 227/454 (50.00%), Query Frame = 2 
Query:   14 KSIKK---VAEKYVVPANTLSTISKNK-KIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLL---ASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISL-----RLISNFREEFTDYLDCDVNV-VCGDIMTD*DIIENV---QNQSMSISNMFEDSIGGEVDETNLSS 1312
            K +KK   +A+ + +P NTLST  KNK KI  +      F    KR+       VD+ V  +  +A +  IP++G +++ K +Q+   L    F+AS GWLDG K     N I   A+   +   ++  AN+W K  L+ +I+     +IFN DETGLF        L +K       +  +++          G +KL   ++   ASP CFKNV S PV+   + KAWM S +F+KWL+KLD  FGK+ R+V  F D+C+AH    L   + N+ + FFP N+T+++QPMD   I+ LK  YR+ +++ IL   D      K+ +L   +   + WD  + P TIK CF+K+GF                 +EAT T  I        ++ +    + D+L+ D +V VCG+I TD +II  V   + Q        ++  G   DET + S
Sbjct:   29 KGVKKKSEIAKDFGIPPNTLSTFLKNKDKILSSA---QEFDKDRKRLREPENPAVDNCVLKWFKQARDKKIPLSGPLIRAKAEQFAKELGKKNFKASTGWLDGFKDR---NKITFKAVCGESGAVNQQEANQW-KQDLEEMIQDRDPKNIFNVDETGLFFKCTPDKTLAFKDEKCHGGKLSKERVTLLVGANMDGSEKLPLLMIGKSASPRCFKNVKSKPVEYVNSSKAWMTSDLFSKWLIKLDKRFGKEKRKVVLFIDNCTAHNTIPL---MENLKVVFFPANMTSVVQPMDQGIIKNLKHFYRSLLVENILT-SDGNALKIKLDILQASRMSKQAWD-KVKPETIKNCFKKAGFV----------KTDEESVEATATEGIPQVDGWEDVVPDPTISYEDFLNVDEDVAVCGEI-TDAEIIAEVLDSEKQDDDGDGSGDEIAGSSADETPVPS 459
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200])

HSP 1 Score: 51.6026 bits (122), Expect = 2.015e-7
Identity = 77/332 (23.19%), Postives = 132/332 (39.76%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIF---KNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALN-CDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLI-RIYKENDIFNGDETGLF---LNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQ---GPKKLNCWLL---ASPHCFKN--VNSLPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNRE-------V*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFID 928
             ++ K++A ++ +   T+  I K K+       VL  +  L   K +    F  ++ AV  +  +     +PI  +ML E+ + +   L   + F AS GWL   K+      I  + +     D   A    ++ +K L  +      ++   ETGL+   L A      C                    +L+C    G  +L   ++   A P  F+N  V+ LPV    +R+AW+ + IF +W  +  V    QN E            D+  AH  D       +I + + PPNL   L+P++   +  LK  YR  V + +   +D
Sbjct:   23 GETAKQLALEFNLGHRTIYDIKKAKEKLWRLNKVLDVDTGLSYMKVIRESRFPQLEEAVYKWFRQHRAMGLPITSSMLIEQARHFHEHLGLTEPFAASAGWLRNFKRRY---CIGEVVVEKVSDDAAEALAARESFMKFLEEQGLSPQQVYAATETGLYWKSLPARTAAGNCRVGRDRIA------------LLLCASAAGTHRLPLAVVGRAAHPRVFRNLDVSLLPVHYYNHRRAWVTTDIFRRWFRERFVPEVTQNLEALGLPPKAVLLLDNSPAHPDDG-SLCCGDITVFYLPPNLAPALKPLEQGAVGHLKVLYRREVARGMALGVD 338
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003106.1 (pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 gene:ENSPMAG00000002845.1 transcript:ENSPMAT00000003106.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.9062 bits (115), Expect = 2.166e-6
Identity = 72/343 (20.99%), Postives = 129/343 (37.61%), Query Frame = 2 
Query:   38 KYVVPANTLSTISKNK-KIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNC--------DTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLASPHCFKNVNSLPVD*DYNRKAWMNSSIFAKWLMKLDV----EFGKQNR---EV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKK------ENWPKITLLDFIKRISKIW 991
            K  +P  T+ TI K+K +I + V    P      R   G    ++  +  ++ + T +++P++  +++ K +     L          +TF+AS GW +  K   + + + R+   A   D   A  +++T+ + +             E G +                            C     + P+ L  +           N+LPV    N KA +  +IF +W     V    E+ + N    +     D+   H    ++    NI + F  PN TALLQPMD   +   K +Y      + +   DK+      E W   ++LD +K I+  W
Sbjct:   39 KLELPRTTVVTILKDKARILEEVKGQAPMQAAYIRQRAGLIAEMEKHLIVWLDDQTRHHVPVSLAIIQAKARSLFEHLKARRGEGSQSETFQASKGWFNRFKSRFKFHEM-RVKGEAKSADVATAGDFSRTLAEII-------------EEGRY----------------------------C---ATENPRALKGY---------TKNTLPVIWKSNPKARVTGAIFEEWFRVYFVPAVKEYCRTNNLAFKAILVLDNAPCHPVS-VEGFDPNIKVVFLTPNTTALLQPMDQGVMSSFKAYYLRQTFAQAISATDKEGGPTLTEFWKGFSILDAVKNIAASW 326
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005921.1 (pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene:ENSPMAG00000005352.1 transcript:ENSPMAT00000005921.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.521 bits (114), Expect = 2.206e-6
Identity = 41/145 (28.28%), Postives = 65/145 (44.83%), Query Frame = 2 
Query:  614 PHCFKNVN--SLPVD*DYNRKAWMNSSIFAKWLMKL---DVEFGKQNREV*F----FFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD----IRCLKDHYRNGVIKEILRFIDK------KENWPKITLLDFIKRISKIW 991
            P  FK ++  +LPV    N  AW+  +IF  W +     DVE   ++  + F      D+  +H   HL     NI + F PPN T++LQPMD     +C K +Y    + + L   +       +E W    +   ++ I+K W
Sbjct:  191 PRAFKGISKATLPVYFRANPTAWVTVAIFEDWFINCFIPDVEKYCRDEGIPFKILLVIDNAPSH-PAHLDDFHPNIKVVFLPPNATSVLQPMDQGVNAKC-KAYYLRRTLAQALEATEGDTGKTVREFWEAYDVYQAVQNIAKAW 333
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006798.1 (pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 gene:ENSPMAG00000006139.1 transcript:ENSPMAT00000006798.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.1358 bits (113), Expect = 3.966e-6
Identity = 42/154 (27.27%), Postives = 66/154 (42.86%), Query Frame = 2 
Query:  614 PHCFKNV--NSLPVD*DYNRKAWMNSSIFAKW-----LMKLDVEFGKQNR--EV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD----IRCLKDHYRNGVIKEILRFIDK------KENWPKITLLDFIKRISKIWDLDIFPTTI 1018
            P   K +  N LPV    N+ AWM   I   W     L++ +    K+N   +V    D+   + K HL +   N+ +   PPN  +LLQP+D    +   K +Y    I ++L   D       ++ W    + D I  I   WD D+  +T+
Sbjct:  179 PRALKGLSRNMLPVHWTANKMAWMTGQIMEDWFTQHFLVESERYCRKENLAFKVLLILDNAPGYPK-HLANINPNVRVLLLPPNTASLLQPLDQGGVVSTFKAYYLRRTISQLLEGTDGPDKPTVRDCWKAYNIRDAINNIKSSWD-DVKQSTM 330
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004617.1 (pep scaffold:Pmarinus_7.0:GL477874:26927:28564:-1 gene:ENSPMAG00000004208.1 transcript:ENSPMAT00000004617.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 47.7506 bits (112), Expect = 4.615e-6
Identity = 80/362 (22.10%), Postives = 139/362 (38.40%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKN----KKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNC----------DTFRASNGWLDGLKKEME*NGIVRLAM--HAAGCDKNVANKWNKTILKPLI--RIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLIC---QGPKKLNCWLLASPH---CFKNVNS--LPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNN---ILLEFFPPNLTA-LLQPMDIRCLKDHYRNGVIKEILRFIDKK-----ENWPKITLLDFIKRISKIW 991
             +S++ +A  Y +   T+  I  N     K F  +   N    +    S  N ++       F+ +    + P++G ML EK K +   L            +TF AS GWL   K   E +GI RL++     G D +   ++     + ++  +    + I+N DETGLF  +     L              K+     VL+C    G  +L    L         K+++   LPV     RKAWM+   F  W                FF     A R +  + KL +   ++++  P + +   LQ  D +  K  YR  +++++L   D+       +W  +++ D +   +  W
Sbjct:   24 GRSLQAIAADYNIGYTTVRDIRDNADKISKFFSELQSANATKKRKTTRSADNKELDAKLYEWFLQQRAQGH-PVSGPMLCEKAKVFSAKLRSRQEGGDEEEEETFMASQGWLRSFK---ERHGIRRLSVVGERHGSDVDAVREYIAR-FQAMVDDKGLCASQIYNADETGLFWKSLPSKTLASSSEVNAAGYKCSKEG--MTVLMCANASGTHRLKLTCLGKSKNLGALKDLSEDCLPVHYYGQRKAWMDQFTFKDW----------------FFTKFVPAVRDNLFREKLGSRAILVIDNAPAHPSGQTLQTQDGQLFKCLYRKELLRKLLDMEDEDPETLIRHWRALSIKDALFVAASAW 362
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Yeast
Match: PDC2 (Transcription factor for thiamine-regulated genes; required for expression of the two isoforms of pyruvate decarboxylase (PDC1 and PDC5) along with thiamine biosynthetic genes; binds a DNA sequence in the PDC5 promoter; mutant fails to grow on 2% glucose and thus is scored as inviable under standard conditions [Source:SGD;Acc:S000002488])

HSP 1 Score: 36.1946 bits (82), Expect = 1.420e-7
Identity = 21/59 (35.59%), Postives = 31/59 (52.54%), Query Frame = 2 
Query:  662 NRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPN 838
            NRKAW+ S++F  WL++ D      NR++    D    HR  +L  +L NI L +   N
Sbjct:  261 NRKAWLTSNLFHNWLVRWDKRLVAVNRKIWIVLDDSCCHRIINL--RLQNIKLVYTSSN 317

HSP 2 Score: 35.8094 bits (81), Expect = 1.420e-7
Identity = 21/64 (32.81%), Postives = 34/64 (53.12%), Query Frame = 1 
Query:  463 RSFFKCLPGKS-FVLQE---------DSCQKGKDSKEK----ITIMLCANMSGTEKIKLLVIGK 612
            +++F  +P K  F L E         D  Q    S ++     T+MLC+N+ G+EK+K +V+GK
Sbjct:  159 KAYFSKIPPKDLFTLDEAFLSYNLPLDYAQYEASSIQRRIEVATVMLCSNLDGSEKLKPVVVGK 222
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Match: EDO44738 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUQ6])

HSP 1 Score: 103.219 bits (256), Expect = 4.024e-24
Identity = 99/361 (27.42%), Postives = 160/361 (44.32%), Query Frame = 2 
Query:   11 NKSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQYVLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAA-GCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAFRVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLASPHCFKNVNS--LPVD*DYNRKAWMNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFF--PPNLTA-LLQPMD---IRCLKDHYRNGVIKEILRFID-------KKENWPKITLLDFIKRISKIWDLDIFPTTIKTCFRKSGF 1045
             KS +K+A+ Y +   T+  I K K         N    + +  +   +  ++     +          I+G ML+EK + +   L+   FRASNGWL+G ++    +GI   A  +      NV  +W + I++ +   Y+  DI+N  ETGL+  A    +L  +  +    R        C  +  +  K L     A+P CF  ++S  LPV    NR+AW+ +SIFA WL  LD +  +++R +  F D+   H       +L N+ L F   P N T   LQP+    +   +  YR  V+   L  +D        K+   +IT LD    I+   D +I  +T+  CF  +GF
Sbjct:   22 TKSQRKLADIYQIGKTTVHEILKKKDDILKAYEQNVDGGRKRVCTRSAYSDINRLAWQWYERMRAQGNQISGPMLQEKARTFAAELDMKDFRASNGWLEGFRRR---HGISFGASFSGYETSVNVTTEWTEKIME-VTDGYRSTDIYNLVETGLYYRALPDKNLVPETESTSTERLTVTL---CCNMDGEFEKPLVIGPTANPPCFAKLDSECLPVIWRANRRAWITTSIFADWLRTLDRKMRQKDRRILLFLDNSPPHPPTL---QLTNVKLVFLIKPSNNTVNQLQPLTQGIVEAFRMAYRRKVLFSTLAKLDDSNSPRSAKQLMQEITELDACFWIAATLD-EISGSTMMNCFESAGF 371
[Close]
BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Match: EDO40000 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8J7])

HSP 1 Score: 68.9366 bits (167), Expect = 4.322e-13
Identity = 61/247 (24.70%), Postives = 104/247 (42.11%), Query Frame = 2 
Query:  125 IKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVKQY---VLALNCDTFRASNGWLDGLKKEME*NGIVRLAMHAAGCDKNVANKWNKTILKPLIRIYKENDIFNGDETGLFLNAF--RVNHLCYXXXXXXXXXXXXXXXP*CFVLICQGPKKLNCWLLA---SPHCFKNVNSLPVD*DYNRKAW-MNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPN 838
            ++ +    GN D+ + A+  +        +PI+G +LKE    +   ++++    F  SNGW+D  KK  +      ++     C   +   W ++ L  L+  Y   D+F+ DE GLF  A   ++ HL  +     K   VR              +KL  +++     P CF  V +LP      +K W ++S++F +W+ + D  F +  R V    D+  AH      S    I L   PP 
Sbjct:   20 LRQRLTPCGNEDL-EKALYTWSVRMKQQGVPISGPVLKETAIHFANELISIVLSGFVGSNGWIDRWKKRQD-VAFKTVSGEILSCTLEMTASWEESTLPTLLSKYALEDMFDADEFGLFYKALPDKLMHLKLQSCVGGKQSKVRLTG---LAAASSSGEKLPMFVIGKSQKPRCFSGVRNLPCRYRAPKKGWILDSNLFEEWVREQDRSFERPGRNVALVVDNGPAH---PTVSNFKAIDLILLPPT 258
[Close]
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000062480.1 (SMESG000062480.1)

HSP 1 Score: 154.451 bits (389), Expect = 2.300e-42
Identity = 74/85 (87.06%), Postives = 83/85 (97.65%), Query Frame = 2 
Query: 1154 EFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFL 1408
            EFTDYLDCDVNVVCGDI+TD DIIENVQNQSMSISN+ ED+IGG++DETNLSS+FSF+TNSEMIDCIQKLRNGML++SSVPQRFL
Sbjct:  249 EFTDYLDCDVNVVCGDIVTDEDIIENVQNQSMSISNISEDNIGGKMDETNLSSKFSFMTNSEMIDCIQKLRNGMLRRSSVPQRFL 333
[Close]
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000011946.1 (SMESG000011946.1)

HSP 1 Score: 131.339 bits (329), Expect = 4.832e-38
Identity = 88/105 (83.81%), Postives = 91/105 (86.67%), Query Frame = 2 
Query:  992 DLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNL 1306
            D DI P TIK CFR+SGFYDDDFN+D DNIPLINIIE TE NYISLRLISNFREEFTDYLDCDVNVVCGDIM D D IENVQNQSMSISN+ EDSI  EVDET L
Sbjct:   91 DSDISPITIKNCFRQSGFYDDDFNNDYDNIPLINIIEVTEINYISLRLISNFREEFTDYLDCDVNVVCGDIMEDEDFIENVQNQSMSISNISEDSIDREVDETKL 195

HSP 2 Score: 46.2098 bits (108), Expect = 4.832e-38
Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 1 
Query: 1342 DRLYSKIKKWNVTAIFCTTKIF 1407
            DRLYSK+KKWNVTAIFCT KIF
Sbjct:  197 DRLYSKVKKWNVTAIFCTIKIF 218
[Close]
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000059729.1 (SMESG000059729.1)

HSP 1 Score: 133.65 bits (335), Expect = 1.746e-36
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 2 
Query: 1148 REEFTDYLDCDVNVVCGDIMTD*DIIENVQNQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGML 1378
            +EEFTDYL CDVNVVCGDIMTD DIIEN+Q QSMSISN+ EDSIGGEVDETNLSSEFSFVTN EMID IQKLRNG+L
Sbjct:  103 KEEFTDYLHCDVNVVCGDIMTDEDIIENLQIQSMSISNISEDSIGGEVDETNLSSEFSFVTNLEMIDFIQKLRNGIL 179

HSP 2 Score: 124.79 bits (312), Expect = 3.308e-33
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 2 
Query:   14 KSIKKVAEKYVVPANTLSTISKNKKIFKNVLRDNPFLIKSKRMSTGNFDMVDSAVSCFVSEATNNNIPINGNMLKEKVK-QYVLALNCD 277
            +SIKKVAEKYVV ANT+STI KNK+  KNVLRDNP LIK KRM     DMVDSAVSCFVSEA NNNIPINGNMLKEK K ++   L+CD
Sbjct:   26 QSIKKVAEKYVVSANTVSTIRKNKEKLKNVLRDNPLLIK-KRMKAEKLDMVDSAVSCFVSEARNNNIPINGNMLKEKAKEEFTDYLHCD 113
[Close]
BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000062480.1 (SMESG000062480.1)

HSP 1 Score: 101.679 bits (252), Expect = 1.076e-23
Identity = 48/57 (84.21%), Postives = 56/57 (98.25%), Query Frame = 2 
Query: 1238 NQSMSISNMFEDSIGGEVDETNLSSEFSFVTNSEMIDCIQKLRNGMLQQSSVPQRFL 1408
            NQSMSISN+ ED+IGG++DETNLSS+FSF+TNSEMIDCIQKLRNGML++SSVPQRFL
Sbjct:  249 NQSMSISNISEDNIGGKMDETNLSSKFSFMTNSEMIDCIQKLRNGMLRRSSVPQRFL 305
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BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Match: SMESG000036624.1 (SMESG000036624.1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.471e-18
Identity = 68/215 (31.63%), Postives = 110/215 (51.16%), Query Frame = 2 
Query:  677 MNSSIFAKWLMKLDVEFGKQNREV*FFFDSCSAHRKDHLKSKLNNILLEFFPPNLTALLQPMD---IRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRIS---------KIWDLDIFPTTIKTCFRKSGFYXXXXXXXXXXXXXXXXXEATETNYISLRLISNFREEFTDYLDCDVNVVCGDIMTD*DIIENVQ--NQSMSISNMFEDSI 1279
            M +  +A  L+K D+E G  NR +  F D+ + H+   +K +L NI LEF PPN T+L+QP+D   IR +K H R  +++++L+ I++       +++DF K I          + W L + P TI+ CFRK+GF            P  N  +  +   +++ L     +E   ++DCD  V C D  TD +I E V+   Q+    N  ED++
Sbjct:    1 MTNRFWADSLLKFDLELG--NRNIILFADNVACHK---VKRQLKNIKLEFIPPNTTSLIQPLDQGTIRTVKVHCRMQLMRQMLQAIEE-----GCSIIDFAKSIDVLVALYMLKQAW-LLVSPATIQYCFRKAGF--------PTVHPDDNEDDLLQIPAVTVELGEAATQET--FVDCDNKVSCHDTSTDAEICEQVRRNRQNWDDDNDTEDAV 194
The following BLAST results are available for this feature:
BLAST of Tigger transposable element derived 6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TIGD66.336e-4628.60tigger transposable element derived 6 [Source:HGNC... [more]
TIGD66.336e-4628.60tigger transposable element derived 6 [Source:HGNC... [more]
TIGD43.089e-3530.03tigger transposable element derived 4 [Source:HGNC... [more]
CENPB7.715e-1922.51centromere protein B [Source:HGNC Symbol;Acc:HGNC:... [more]
TIGD23.498e-1824.06tigger transposable element derived 2 [Source:HGNC... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Tigger transposable element derived 6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
cag4.293e-627.03gene:FBgn0017414 transcript:FBtr0331937[more]
cag4.293e-627.03gene:FBgn0017414 transcript:FBtr0088239[more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Tigger transposable element derived 6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSXETT00000046714.11.925e-2528.57pep primary_assembly:Xenopus_tropicalis_v9.1:KV460... [more]
kif62.481e-621.30kinesin family member 6 [Source:Xenbase;Acc:XB-GEN... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Tigd48.248e-3830.03tigger transposable element derived 4 [Source:MGI ... [more]
Cenpb1.282e-1923.22centromere protein B [Source:MGI Symbol;Acc:MGI:88... [more]
Tigd27.696e-1924.80tigger transposable element derived 2 [Source:MGI ... [more]
Jrkl3.060e-1623.35Jrk-like [Source:MGI Symbol;Acc:MGI:1924782][more]
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BLAST of Tigger transposable element derived 6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q17RP2|TIGD6_HUMAN3.043e-4528.60Tigger transposable element-derived protein 6 OS=H... [more]
sp|Q8BUZ3|TIGD4_MOUSE5.769e-3730.03Tigger transposable element-derived protein 4 OS=M... [more]
sp|Q8IY51|TIGD4_HUMAN1.484e-3430.03Tigger transposable element-derived protein 4 OS=H... [more]
sp|P48988|CENPB_CRIGR4.958e-1923.40Major centromere autoantigen B OS=Cricetulus grise... [more]
sp|P27790|CENPB_MOUSE8.965e-1923.22Major centromere autoantigen B OS=Mus musculus OX=... [more]
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BLAST of Tigger transposable element derived 6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1E1X4203.651e-5328.60Putative tigger transposable element-derived (Frag... [more]
A0A2S2QVQ01.476e-5230.69Tigger transposable element-derived protein 4 OS=S... [more]
A0A4D5RER37.012e-4930.95Putative tigger transposable element-derived (Frag... [more]
T2M9D74.920e-4832.94Tigger transposable element-derived protein 4 (Fra... [more]
A0A1B6LVP44.977e-4832.82Uncharacterized protein OS=Graphocephala atropunct... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Tigger transposable element derived 6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
JRKL2.015e-723.19JRK like [Source:HGNC Symbol;Acc:HGNC:6200][more]
ENSPMAT00000003106.12.166e-620.99pep scaffold:Pmarinus_7.0:GL476998:37517:41189:1 g... [more]
ENSPMAT00000005921.12.206e-628.28pep scaffold:Pmarinus_7.0:GL487978:976:2666:1 gene... [more]
ENSPMAT00000006798.13.966e-627.27pep scaffold:Pmarinus_7.0:GL478691:31611:33359:1 g... [more]
ENSPMAT00000004617.14.615e-622.10pep scaffold:Pmarinus_7.0:GL477874:26927:28564:-1 ... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
PDC21.420e-735.59Transcription factor for thiamine-regulated genes;... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO447384.024e-2427.42Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO400004.322e-1324.70Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Tigger transposable element derived 6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Tigger transposable element derived 6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000062480.12.300e-4287.06SMESG000062480.1[more]
SMESG000011946.14.832e-3883.81SMESG000011946.1[more]
SMESG000059729.11.746e-3687.01SMESG000059729.1[more]
SMESG000062480.11.076e-2384.21SMESG000062480.1[more]
SMESG000036624.14.471e-1831.63SMESG000036624.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30021171 ID=SMED30021171|Name=Tigger transposable element derived 6|organism=Schmidtea mediterranea sexual|type=transcript|length=1511bp
CTTATAGCCCAACAAAAGCATTAAAAAGGTTGCAGAAAAGTACGTTGTTC
CAGCAAATACATTATCAACAATCAGTAAGAACAAAAAAATTTTTAAAAAT
GTGCTACGTGATAATCCATTCTTAATAAAAAGCAAAAGAATGAGCACAGG
AAATTTTGATATGGTAGATAGTGCTGTCAGTTGCTTCGTTTCAGAAGCCA
CAAATAATAATATTCCTATAAATGGAAATATGCTTAAAGAGAAAGTCAAG
CAATATGTATTAGCATTAAATTGTGATACGTTTAGAGCTAGTAATGGATG
GCTCGATGGTTTAAAAAAGGAAATGGAATAAAATGGCATTGTTAGACTGG
CGATGCATGCAGCAGGTTGCGACAAAAATGTAGCAAACAAATGGAATAAA
ACTATATTGAAACCACTTATTCGGATCTACAAAGAAAATGATATTTTTAA
TGGGGATGAAACCGGTCTTTTTTTAAATGCCTTCCGGGTAAATCATTTGT
GTTACAAGAAGATAGCTGTCAAAAAGGCAAGGACAGTAAGGAAAAAATAA
CCATAATGCTTTGTGCTAATATGTCAGGGACCGAAAAAATTAAACTGTTG
GTTATTGGCAAGTCCACATTGTTTTAAAAATGTCAATTCACTGCCAGTGG
ATTAAGATTATAACAGAAAGGCGTGGATGAATTCATCTATTTTTGCTAAA
TGGTTAATGAAATTGGACGTTGAATTTGGGAAGCAAAATCGGGAAGTTTA
GTTTTTCTTCGATAGTTGCTCAGCCCATAGAAAAGATCATCTTAAATCCA
AACTAAATAATATCCTATTGGAATTCTTTCCTCCTAATCTAACAGCGCTT
CTTCAACCAATGGACATCAGATGCTTAAAAGATCACTACAGAAATGGAGT
AATAAAAGAAATCCTTAGGTTTATTGATAAAAAAGAAAATTGGCCCAAAA
TTACATTATTAGATTTCATAAAACGAATTTCGAAAATATGGGATCTAGAC
ATCTTTCCTACAACAATCAAAACATGTTTTAGGAAGTCTGGATTCTATGA
TGACGATTTCAATGATGACGATGATAATATTCCATTAATAAATATTATTG
AAGCAACGGAAACAAATTATATTTCCCTGCGCCTAATATCCAATTTCAGA
GAGGAGTTTACGGATTATCTGGATTGTGATGTTAATGTTGTGTGTGGGGA
TATTATGACGGATTAAGATATCATTGAAAATGTACAGAATCAATCAATGT
CTATCAGTAATATGTTTGAGGATAGCATTGGTGGGGAAGTGGATGAAACG
AATTTGTCTTCTGAATTCTCATTTGTGACAAATTCAGAAATGATCGACTG
TATTCAAAAATTAAGAAATGGAATGTTACAGCAATCTTCTGTACCACAAA
GATTTTTAATACGCTCAATGAAATGGATGTTTTTTTAGAAAAAGATTGAA
TCTTTGTTATGGGGAAAATTATTTTAATTATGTACTTTTAATAAATTTGT
TTTAAAAATGT
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protein sequence of SMED30021171-orf-1

>SMED30021171-orf-1 ID=SMED30021171-orf-1|Name=SMED30021171-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=119bp
MDIRCLKDHYRNGVIKEILRFIDKKENWPKITLLDFIKRISKIWDLDIFP
TTIKTCFRKSGFYDDDFNDDDDNIPLINIIEATETNYISLRLISNFREEF
TDYLDCDVNVVCGDIMTD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom
IPR009057Homeobox-like_sf
IPR006600HTH_CenpB_DNA-bd_dom
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 1..24
e-value: 4.4E-5
score: 23.2