Corepressor interacting with RBPJ 1

Overview
NameCorepressor interacting with RBPJ 1
Smed IDSMED30021151
Length (bp)952
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Corepressor interacting with RBPJ 1 (SMED30021151) t-SNE clustered cells

Violin plots show distribution of expression levels for Corepressor interacting with RBPJ 1 (SMED30021151) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Corepressor interacting with RBPJ 1 (SMED30021151) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Corepressor interacting with RBPJ 1 (SMED30021151) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30021151

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30021151h1SMcG0017213 dd_Smed_v4_1892_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30021151h1SMcG0017213 dd_Smed_v4_1892_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30021151h1SMcG0017213 dd_Smed_v4_1892_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30021151h1SMcG0017213 dd_Smed_v4_1892_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30021151h1SMcG0017213 dd_Smed_v4_1892_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217])

HSP 1 Score: 139.428 bits (350), Expect = 3.075e-37
Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P   +K+ +  E+         EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 146          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217])

HSP 1 Score: 80.1073 bits (196), Expect = 2.733e-18
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2
Query:  365 WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN 520
            WQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F 
Sbjct:    3 WQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFG 52          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Match: cir-1 (CIR (Transcription factor CBF1 Interacting coRepressor) homolog; CIR-1 [Source:UniProtKB/TrEMBL;Acc:G5EBE3])

HSP 1 Score: 162.54 bits (410), Expect = 1.973e-45
Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPT-IVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT 526
            MGKG+ NFMSKK FHP++  N+K  W A QK   E K++ +L  A E EQ IL  K  +GD+ A MGLS+MY+ P  + +++E   E KFEWQR Y APRE++ KG+ +I DQPFGI+VRNVRC +CH+WGH+N+D+ CP+F ++
Sbjct:    1 MGKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLSFMYDAPAGMTKREEPKEEPKFEWQRKYQAPREDWAKGNEEIQDQPFGIQVRNVRCCKCHKWGHINTDRECPLFGKS 145          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Match: cir-1 (CIR (Transcription factor CBF1 Interacting coRepressor) homolog; CIR-1 [Source:UniProtKB/TrEMBL;Acc:G5EBE3])

HSP 1 Score: 162.54 bits (410), Expect = 1.973e-45
Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPT-IVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT 526
            MGKG+ NFMSKK FHP++  N+K  W A QK   E K++ +L  A E EQ IL  K  +GD+ A MGLS+MY+ P  + +++E   E KFEWQR Y APRE++ KG+ +I DQPFGI+VRNVRC +CH+WGH+N+D+ CP+F ++
Sbjct:    1 MGKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLSFMYDAPAGMTKREEPKEEPKFEWQRKYQAPREDWAKGNEEIQDQPFGIQVRNVRCCKCHKWGHINTDRECPLFGKS 145          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Fly
Match: CG6843 (gene:FBgn0036827 transcript:FBtr0075067)

HSP 1 Score: 164.081 bits (414), Expect = 1.476e-47
Identity = 88/196 (44.90%), Postives = 126/196 (64.29%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMG-DKHAIMGLSWMYEQPTIVXXXXXXXXXXXX----WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSK------EPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVV 649
            MGKG++N+M KKFFHP S +N+KR WMAEQ+ +  KKK+ +L    E EQN+   K  +  D    + +++MYE P  V K+ E  + + E    WQR YNAPRE YCKG ++I DQPFGI+VRNVRCL+CH+WGH+N+DK C M++ +MS+      E    D    ++ +  M  +GL + K++A  + SIR +
Sbjct:    1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRNQYEKEQNLHENKAMLSKDSKDKLSVNFMYEPPPGVRKEREKDDNEPEYKFEWQRKYNAPRESYCKGDTEIRDQPFGIQVRNVRCLKCHKWGHINTDKECTMYSISMSEARKLHAETEASDIMAKNVLEEQMKEDGLMM-KRSAQELQSIRAI 195          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Zebrafish
Match: CIR1 (si:ch73-167c12.2 [Source:ZFIN;Acc:ZDB-GENE-100922-268])

HSP 1 Score: 123.635 bits (309), Expect = 2.715e-32
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + NFM KK FHP S  NIK+ W+AEQK  FEKK++ +L+ A   EQ     ++ MGD     GL++MYE P                      P ++      +I DQPFGI+VRNVRC++CH WGHVN+D+ CP+F
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKQQEELMQAYVKEQETYNNRLLMGDDRVKNGLNFMYEAP----------------------PGDDM-----NIRDQPFGIQVRNVRCIKCHNWGHVNTDRECPLF 114          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Xenopus
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:100495464])

HSP 1 Score: 144.436 bits (363), Expect = 1.514e-38
Identity = 76/146 (52.05%), Postives = 100/146 (68.49%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQP-----TIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ DL+     EQ+    ++ +GD+    GL++MYE P      I E + ET E KFEWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKITYDKKKQDDLMQQYLKEQDSYNNRLLLGDERVKNGLNFMYEAPPGAEKEIKENEGETTEYKFEWQKT--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 144          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Mouse
Match: Cir1 (corepressor interacting with RBPJ, 1 [Source:MGI Symbol;Acc:MGI:1914185])

HSP 1 Score: 141.739 bits (356), Expect = 2.706e-38
Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEI--IDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P  V+K+ +  E+         EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F  +    S  PT      +   +L   M ++G  L +    +  ++   DPS+        E   ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDCEEDPEVEFLKSLTTKQKQKLLRKL 228          
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q5U2T8|CIR1_RAT (Corepressor interacting with RBPJ 1 OS=Rattus norvegicus OX=10116 GN=Cir1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.274e-37
Identity = 88/232 (37.93%), Postives = 133/232 (57.33%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P  V+K+ +  E+         EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F  +    S  PT      +   +L   M ++G  L +    +  ++   DPS+   + +      ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDGEEDPEVEFLKSLTTKQKQKLLRKL 228          
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q5ZI03|CIR1_CHICK (Corepressor interacting with RBPJ 1 OS=Gallus gallus OX=9031 GN=CIR1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.604e-37
Identity = 87/235 (37.02%), Postives = 136/235 (57.87%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXX-----WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN------QTMSKE---PTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER---SENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P   +K+E   ++        WQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F        ++S +   P++   ++++     M ++G  L +    +  ++   DPS+    SE     E ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKEEAKEQEGETEYKFEWQKV--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVSSDGSGPSMHPSELIAE----MRNSGFALKQNV--LGRNLTANDPSQEFVASEGDDDPE-VEFLKSLSTKQKQKLLRKL 226          
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q9DA19|CIR1_MOUSE (Corepressor interacting with RBPJ 1 OS=Mus musculus OX=10090 GN=Cir1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.893e-37
Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEI--IDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P  V+K+ +  E+         EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F  +    S  PT      +   +L   M ++G  L +    +  ++   DPS+        E   ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDCEEDPEVEFLKSLTTKQKQKLLRKL 228          
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q86X95|CIR1_HUMAN (Corepressor interacting with RBPJ 1 OS=Homo sapiens OX=9606 GN=CIR1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.477e-36
Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + NFM KK FHP S  NIK+ WMAEQK  ++KKK+ +L+     EQ     ++ MGD+    GL++MYE P   +K+ +  E+         EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 146          
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A0R3WHJ9 (Cir_N domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS17 PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 5.106e-68
Identity = 110/232 (47.41%), Postives = 152/232 (65.52%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L     EQ IL  ++ +GD+ A +GL+WMY+QP ++E  K+ +  + KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT    + L   K  +   GL   K A S             + S R +DP    E   +   ++F+ +L EK+R + + KL
Sbjct:    1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKEADRNDAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKCAISSSRGLDP----EAVEHELTVEFLRSLSEKQRERLLKKL 228          
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A0R3W8A2 (Cir_N domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6573 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 2.283e-67
Identity = 110/232 (47.41%), Postives = 151/232 (65.09%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L     EQ IL  ++ +GD+ A +GL+WMY+QP ++E  K+ +  + KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT    + L   K  +   GL   K A S             V S   +DP    E   +   ++F+ +L EK+R + + KL
Sbjct:    1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKEADRNDAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQRERLLKKL 228          
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A5J4NVE3 (CBF1 interacting corepressor OS=Paragonimus westermani OX=34504 GN=DEA37_0011227 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.602e-66
Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKIL-----SMQKLG-MLSNGLQLSKQAASVVPSIRVVDPSERSE-NKGYSEIIDFINNLPEKKRNKFVTKLKE 754
            MGKGY+N+M KKFFHPT+ ENIKRKWMAEQ  +++ KKE + L     EQ  L  ++ +GD+ A +GL+WMY+QP ++EK+++  E KFEWQR YNAPRE YCK SSDI DQPF IEVRNVRC+RC QWGH+N+D+ICP+F Q+ + EP+I D   +      +QK G ML  G +L +    +  + + V  + +++  +  S  ++F+ NL E++R K + KL +
Sbjct:    1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQAHEYDTKKEDEKLNQYRREQETLENRVLLGDEKAKLGLAWMYDQPVLMEKEKDDKEVKFEWQRKYNAPRESYCKNSSDIVDQPFAIEVRNVRCMRCRQWGHLNTDRICPLFGQSFTNEPSITDSITVDHVQKGLQKEGLMLKRGTELDRYTNILSKAKQAVKGASKTDIEEEDSLAMEFLQNLSERQREKLLRKLSD 227          
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: W6UNH9 (Corepressor interacting with RBPJ OS=Echinococcus granulosus OX=6210 GN=EGR_05298 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.048e-65
Identity = 109/225 (48.44%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKR 727
            MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L     EQ IL  ++ +GD+ A +GL+WMY+QP ++E  K+ +  E KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT    + L   K  +   GL   K A S             V S   +DP    E   +   ++F+ +L EK+R
Sbjct:    1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKETDRNEAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQR 221          
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A068WRV0 (Corepressor interacting with RBPJ 1 OS=Echinococcus granulosus OX=6210 GN=EgrG_000257500 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.619e-65
Identity = 109/225 (48.44%), Postives = 147/225 (65.33%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKR 727
            MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L     EQ IL  ++ +GD+ A +GL+WMY+QP ++E  K+ +  E KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT    + L   K  +   GL   K A S             V S   +DP    E   +   ++F+ +L EK+R
Sbjct:    8 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKETDRNEAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQR 228          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182])

HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39
Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ W+AEQK  FEKKK+ DL+ A   EQ     ++ MGD     GL++MYE P    K+E   +   E +  +     APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F           T    P++   ++++     M ++G  L K    +  +  V DP++   +  +     ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182])

HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39
Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ W+AEQK  FEKKK+ DL+ A   EQ     ++ MGD     GL++MYE P    K+E   +   E +  +     APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F           T    P++   ++++     M ++G  L K    +  +  V DP++   +  +     ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182])

HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39
Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S  NIK+ W+AEQK  FEKKK+ DL+ A   EQ     ++ MGD     GL++MYE P    K+E   +   E +  +     APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F           T    P++   ++++     M ++G  L K    +  +  V DP++   +  +     ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Sea Lamprey
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217])

HSP 1 Score: 159.844 bits (403), Expect = 1.079e-45
Identity = 89/234 (38.03%), Postives = 133/234 (56.84%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNY------NAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKIL-SMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748
            MGK + NFM KK FHP S ENIKR WMAEQK  FEKKK+ +LL     EQ I   ++ MGD+    GL++MYE P    K+ +  +K+   ++ Y       APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++           T   EP +    ++  M+  G       L ++  +  PS ++++  E  + +     ++F+ +L  K++ K + KL
Sbjct:    1 MGKSFANFMCKKDFHPASKENIKRVWMAEQKVAFEKKKQDELLTQYTKEQEIYNNRLLMGDERVKNGLNFMYEAPPGTYKEIKKKQKETGGEKEYKFEWQKGAPREKYAKDDDNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLYGLSGINATSATTDEPEPAMHPSDLMVEMRSSGFALKQCVLGRKGDAADPSQQLIESEEDEDPE-----VEFLKSLTTKQKRKLLRKL 229          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Nematostella
Match: EDO37265 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SG80])

HSP 1 Score: 114.775 bits (286), Expect = 2.060e-30
Identity = 84/226 (37.17%), Postives = 122/226 (53.98%), Query Frame = 2
Query:  104 GYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQN-ILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXX----WQRNYNAPREEYCKGSS-DINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQ--TMSKEP-TIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER---SENKGYSEIIDFINNLPEKKRNKFVTK 745
             +  FM+KK FHP S  NIK+ WMAEQK   EK KE D+    + EQ     + +   D+    GL +MYE P   EK +   EK+ E    WQ+   APRE Y K  +  I DQPFGI VRNV+C+RC +WGHVN+D+ CPM N+    + +P T  D    +     M S+GL L +       +    DP+++   S+N+      +F+ +L +K++ K + +
Sbjct:    2 AFAKFMNKKDFHPGSKWNIKKVWMAEQKALSEKTKEQDMAYQYKKEQERYQNRTMITKDEKLKAGLGFMYEAPPGYEKDKLPKEKEEEPRFEWQKG--APREAYAKDLNLAIRDQPFGIPVRNVKCIRCGKWGHVNTDRECPMLNKVSVANYDPTTFADVADPAQLMEDMRSDGLALKQSVLGR--TFNPKDPNQQILASDNEEEDPEAEFLASLTDKQKRKLLRR 223          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351])

HSP 1 Score: 143.665 bits (361), Expect = 4.952e-39
Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + N+M KK FHP S  NIK+ WMAEQK  F+K+K+ DL+ A   EQ     ++ MGD     GL++MYE P      E   E KFEWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++
Sbjct:    1 MGKSFANYMCKKDFHPASKSNIKKVWMAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPP----GEGQEECKFEWQK--TAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 135          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351])

HSP 1 Score: 142.895 bits (359), Expect = 8.154e-39
Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX----XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MGK + N+M KK FHP S  NIK+ WMAEQK  F+K+K+ DL+ A   EQ     ++ MGD     GL++MYE P    K+E   E +     EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++
Sbjct:    1 MGKSFANYMCKKDFHPASKSNIKKVWMAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEEGQEECKFEWQK--TAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 143          
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351])

HSP 1 Score: 110.923 bits (276), Expect = 3.043e-27
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 2
Query:  173 MAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX----XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517
            MAEQK  F+K+K+ DL+ A   EQ     ++ MGD     GL++MYE P    K+E   E +     EWQ+   APRE+Y K   +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++
Sbjct:    1 MAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEEGQEECKFEWQKT--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 117          
BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Match: SMESG000027503.1 (SMESG000027503.1)

HSP 1 Score: 468.003 bits (1203), Expect = 3.391e-168
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILXXXXXXXXXXXXXXXXXXXXXXCSRDRSQRRHS 883
            MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKCSRDRSQRRHS
Sbjct:    1 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKCSRDRSQRRHS 263          
BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Match: SMESG000027499.1 (SMESG000027499.1)

HSP 1 Score: 456.062 bits (1172), Expect = 1.744e-163
Identity = 258/263 (98.10%), Postives = 260/263 (98.86%), Query Frame = 2
Query:   95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILXXXXXXXXXXXXXXXXXXXXXXCSRDRSQRRHS 883
            MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEK KESDLLAAREAEQN+LTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSK AASVVPSIRVVDPSERSEN+GYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRK SRDRSQRRHS
Sbjct:    1 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKNKESDLLAAREAEQNMLTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKPAASVVPSIRVVDPSERSENQGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKRSRDRSQRRHS 263          
The following BLAST results are available for this feature:
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
CIR13.075e-3747.97corepressor interacting with RBPJ, 1 [Source:HGNC ... [more]
CIR12.733e-1861.54corepressor interacting with RBPJ, 1 [Source:HGNC ... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
cir-11.973e-4553.10CIR (Transcription factor CBF1 Interacting coRepre... [more]
cir-11.973e-4553.10CIR (Transcription factor CBF1 Interacting coRepre... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG68431.476e-4744.90gene:FBgn0036827 transcript:FBtr0075067[more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CIR12.715e-3243.97si:ch73-167c12.2 [Source:ZFIN;Acc:ZDB-GENE-100922-... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CIR11.514e-3852.05corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Cir12.706e-3838.36corepressor interacting with RBPJ, 1 [Source:MGI S... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q5U2T8|CIR1_RAT1.274e-3737.93Corepressor interacting with RBPJ 1 OS=Rattus norv... [more]
sp|Q5ZI03|CIR1_CHICK1.604e-3737.02Corepressor interacting with RBPJ 1 OS=Gallus gall... [more]
sp|Q9DA19|CIR1_MOUSE1.893e-3738.36Corepressor interacting with RBPJ 1 OS=Mus musculu... [more]
sp|Q86X95|CIR1_HUMAN1.477e-3647.97Corepressor interacting with RBPJ 1 OS=Homo sapien... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0R3WHJ95.106e-6847.41Cir_N domain-containing protein OS=Hydatigena taen... [more]
A0A0R3W8A22.283e-6747.41Cir_N domain-containing protein OS=Taenia asiatica... [more]
A0A5J4NVE32.602e-6648.46CBF1 interacting corepressor OS=Paragonimus wester... [more]
W6UNH91.048e-6548.44Corepressor interacting with RBPJ OS=Echinococcus ... [more]
A0A068WRV01.619e-6548.44Corepressor interacting with RBPJ 1 OS=Echinococcu... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
si:ch73-167c12.23.327e-3937.34corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
si:ch73-167c12.23.327e-3937.34corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
si:ch73-167c12.23.327e-3937.34corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
si:ch73-167c12.21.079e-4538.03corepressor interacting with RBPJ, 1 [Source:HGNC ... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO372652.060e-3037.17Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
si:ch73-167c12.24.952e-3951.77corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
si:ch73-167c12.28.154e-3949.66corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
si:ch73-167c12.23.043e-2747.90corepressor interacting with RBPJ, 1 [Source:NCBI ... [more]
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BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000027503.13.391e-168100.00SMESG000027503.1[more]
SMESG000027499.11.744e-16398.10SMESG000027499.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30021151 ID=SMED30021151|Name=Corepressor interacting with RBPJ 1|organism=Schmidtea mediterranea sexual|type=transcript|length=952bp
GTTTAAAAGATGTATTCTATTAATAATCAATAAACACTTATTAAATTTAT
TAATTTTAAAAATATTTTTTTCTGAGTAAATTATAAAATTAAAAATGGGA
AAAGGCTATCATAATTTTATGTCAAAAAAGTTTTTCCATCCAACTAGTGG
AGAAAATATTAAACGAAAATGGATGGCTGAACAAAAAGATGATTTTGAAA
AGAAAAAAGAAAGTGATCTTCTTGCAGCGCGTGAAGCTGAACAAAATATA
CTTACTAAGAAAATAGCTATGGGAGATAAACATGCAATTATGGGATTAAG
TTGGATGTATGAACAACCAACTATTGTAGAGAAAAAAGAAGAAACAGGAG
AAAAGAAATTCGAATGGCAAAGAAATTATAATGCTCCTCGTGAAGAATAT
TGTAAAGGATCAAGTGATATAAACGATCAACCTTTTGGTATAGAAGTTAG
AAATGTTCGTTGTCTAAGATGTCATCAATGGGGTCATGTAAATTCTGATA
AAATATGTCCAATGTTTAATCAAACTATGTCAAAAGAGCCAACTATTGAA
GATTTTAAAATTTTGAGCATGCAAAAATTAGGAATGCTCAGCAATGGTTT
ACAATTATCAAAACAAGCCGCATCTGTTGTACCTAGTATTCGAGTTGTTG
ATCCGTCTGAAAGATCCGAGAATAAAGGATATTCAGAAATAATAGATTTC
ATTAACAATCTTCCAGAAAAGAAGCGAAACAAATTTGTCACAAAGCTTAA
AGAATGGCGCCATTTGAATAAAAAAGAAATACTAAAAAAGTTAGATAAAT
ATATGGATAAAAAGAAGCATAAGAAAAACAAAAGAGACAAGCCTCGGAAA
TGTTCGAGAGATCGTTCACAGCGAAGACATTCTTGATATTTCGATATATG
AGATTTTTAAAATTGTTTTCAATAAAAGTTGTATTCTTAAGATCGTAAGA
GC
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protein sequence of SMED30021151-orf-1

>SMED30021151-orf-1 ID=SMED30021151-orf-1|Name=SMED30021151-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=264bp
MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQ
NILTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPRE
EYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPT
IEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEII
DFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKP
RKCSRDRSQRRHS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003714transcription corepressor activity
GO:0051082unfolded protein binding
Vocabulary: biological process
TermDefinition
GO:1903507negative regulation of nucleic acid-templated transcription
GO:0006457protein folding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000099neuron
Vocabulary: INTERPRO
TermDefinition
IPR040014CIR1
IPR019339CIR_N_dom
Vocabulary: cellular component
TermDefinition
GO:0016272prefoldin complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..263
NoneNo IPR availablePANTHERPTHR13151:SF2COREPRESSOR INTERACTING WITH RBPJ 1coord: 1..256
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 13..49
e-value: 3.4E-7
score: 39.9
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 13..49
e-value: 1.3E-9
score: 38.1
IPR040014Corepressor interacting with RBPJ 1PANTHERPTHR13151CBF1 INTERACTING COREPRESSOR CIRcoord: 1..256