Corepressor interacting with RBPJ 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30021151 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]) HSP 1 Score: 139.428 bits (350), Expect = 3.075e-37 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P +K+ + E+ EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 146
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]) HSP 1 Score: 80.1073 bits (196), Expect = 2.733e-18 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2 Query: 365 WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN 520 WQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F Sbjct: 3 WQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFG 52
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Match: cir-1 (CIR (Transcription factor CBF1 Interacting coRepressor) homolog; CIR-1 [Source:UniProtKB/TrEMBL;Acc:G5EBE3]) HSP 1 Score: 162.54 bits (410), Expect = 1.973e-45 Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPT-IVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT 526 MGKG+ NFMSKK FHP++ N+K W A QK E K++ +L A E EQ IL K +GD+ A MGLS+MY+ P + +++E E KFEWQR Y APRE++ KG+ +I DQPFGI+VRNVRC +CH+WGH+N+D+ CP+F ++ Sbjct: 1 MGKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLSFMYDAPAGMTKREEPKEEPKFEWQRKYQAPREDWAKGNEEIQDQPFGIQVRNVRCCKCHKWGHINTDRECPLFGKS 145
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Match: cir-1 (CIR (Transcription factor CBF1 Interacting coRepressor) homolog; CIR-1 [Source:UniProtKB/TrEMBL;Acc:G5EBE3]) HSP 1 Score: 162.54 bits (410), Expect = 1.973e-45 Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPT-IVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT 526 MGKG+ NFMSKK FHP++ N+K W A QK E K++ +L A E EQ IL K +GD+ A MGLS+MY+ P + +++E E KFEWQR Y APRE++ KG+ +I DQPFGI+VRNVRC +CH+WGH+N+D+ CP+F ++ Sbjct: 1 MGKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLSFMYDAPAGMTKREEPKEEPKFEWQRKYQAPREDWAKGNEEIQDQPFGIQVRNVRCCKCHKWGHINTDRECPLFGKS 145
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Fly
Match: CG6843 (gene:FBgn0036827 transcript:FBtr0075067) HSP 1 Score: 164.081 bits (414), Expect = 1.476e-47 Identity = 88/196 (44.90%), Postives = 126/196 (64.29%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMG-DKHAIMGLSWMYEQPTIVXXXXXXXXXXXX----WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSK------EPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVV 649 MGKG++N+M KKFFHP S +N+KR WMAEQ+ + KKK+ +L E EQN+ K + D + +++MYE P V K+ E + + E WQR YNAPRE YCKG ++I DQPFGI+VRNVRCL+CH+WGH+N+DK C M++ +MS+ E D ++ + M +GL + K++A + SIR + Sbjct: 1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRNQYEKEQNLHENKAMLSKDSKDKLSVNFMYEPPPGVRKEREKDDNEPEYKFEWQRKYNAPRESYCKGDTEIRDQPFGIQVRNVRCLKCHKWGHINTDKECTMYSISMSEARKLHAETEASDIMAKNVLEEQMKEDGLMM-KRSAQELQSIRAI 195
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Zebrafish
Match: CIR1 (si:ch73-167c12.2 [Source:ZFIN;Acc:ZDB-GENE-100922-268]) HSP 1 Score: 123.635 bits (309), Expect = 2.715e-32 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + NFM KK FHP S NIK+ W+AEQK FEKK++ +L+ A EQ ++ MGD GL++MYE P P ++ +I DQPFGI+VRNVRC++CH WGHVN+D+ CP+F Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKQQEELMQAYVKEQETYNNRLLMGDDRVKNGLNFMYEAP----------------------PGDDM-----NIRDQPFGIQVRNVRCIKCHNWGHVNTDRECPLF 114
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Xenopus
Match: CIR1 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:100495464]) HSP 1 Score: 144.436 bits (363), Expect = 1.514e-38 Identity = 76/146 (52.05%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQP-----TIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ DL+ EQ+ ++ +GD+ GL++MYE P I E + ET E KFEWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKITYDKKKQDDLMQQYLKEQDSYNNRLLLGDERVKNGLNFMYEAPPGAEKEIKENEGETTEYKFEWQKT--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 144
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Mouse
Match: Cir1 (corepressor interacting with RBPJ, 1 [Source:MGI Symbol;Acc:MGI:1914185]) HSP 1 Score: 141.739 bits (356), Expect = 2.706e-38 Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEI--IDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P V+K+ + E+ EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F + S PT + +L M ++G L + + ++ DPS+ E ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDCEEDPEVEFLKSLTTKQKQKLLRKL 228
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q5U2T8|CIR1_RAT (Corepressor interacting with RBPJ 1 OS=Rattus norvegicus OX=10116 GN=Cir1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.274e-37 Identity = 88/232 (37.93%), Postives = 133/232 (57.33%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P V+K+ + E+ EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F + S PT + +L M ++G L + + ++ DPS+ + + ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDGEEDPEVEFLKSLTTKQKQKLLRKL 228
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q5ZI03|CIR1_CHICK (Corepressor interacting with RBPJ 1 OS=Gallus gallus OX=9031 GN=CIR1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.604e-37 Identity = 87/235 (37.02%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXX-----WQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN------QTMSKE---PTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER---SENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P +K+E ++ WQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F ++S + P++ ++++ M ++G L + + ++ DPS+ SE E ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKEEAKEQEGETEYKFEWQKV--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVSSDGSGPSMHPSELIAE----MRNSGFALKQNV--LGRNLTANDPSQEFVASEGDDDPE-VEFLKSLSTKQKQKLLRKL 226
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q9DA19|CIR1_MOUSE (Corepressor interacting with RBPJ 1 OS=Mus musculus OX=10090 GN=Cir1 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.893e-37 Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQT---MSKEPTIEDFKILSMQKL--GMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEI--IDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P V+K+ + E+ EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F + S PT + +L M ++G L + + ++ DPS+ E ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAEMRNSGFALKRNV--LGRNLTANDPSQDYVASDCEEDPEVEFLKSLTTKQKQKLLRKL 228
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Match: sp|Q86X95|CIR1_HUMAN (Corepressor interacting with RBPJ 1 OS=Homo sapiens OX=9606 GN=CIR1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.477e-36 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX-------XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + NFM KK FHP S NIK+ WMAEQK ++KKK+ +L+ EQ ++ MGD+ GL++MYE P +K+ + E+ EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKG--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLF 146
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A0R3WHJ9 (Cir_N domain-containing protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS17 PE=4 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 5.106e-68 Identity = 110/232 (47.41%), Postives = 152/232 (65.52%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L EQ IL ++ +GD+ A +GL+WMY+QP ++E K+ + + KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT + L K + GL K A S + S R +DP E + ++F+ +L EK+R + + KL Sbjct: 1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKEADRNDAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKCAISSSRGLDP----EAVEHELTVEFLRSLSEKQRERLLKKL 228
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A0R3W8A2 (Cir_N domain-containing protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS6573 PE=4 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 2.283e-67 Identity = 110/232 (47.41%), Postives = 151/232 (65.09%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L EQ IL ++ +GD+ A +GL+WMY+QP ++E K+ + + KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT + L K + GL K A S V S +DP E + ++F+ +L EK+R + + KL Sbjct: 1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKEADRNDAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQRERLLKKL 228
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A5J4NVE3 (CBF1 interacting corepressor OS=Paragonimus westermani OX=34504 GN=DEA37_0011227 PE=4 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.602e-66 Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKIL-----SMQKLG-MLSNGLQLSKQAASVVPSIRVVDPSERSE-NKGYSEIIDFINNLPEKKRNKFVTKLKE 754 MGKGY+N+M KKFFHPT+ ENIKRKWMAEQ +++ KKE + L EQ L ++ +GD+ A +GL+WMY+QP ++EK+++ E KFEWQR YNAPRE YCK SSDI DQPF IEVRNVRC+RC QWGH+N+D+ICP+F Q+ + EP+I D + +QK G ML G +L + + + + V + +++ + S ++F+ NL E++R K + KL + Sbjct: 1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQAHEYDTKKEDEKLNQYRREQETLENRVLLGDEKAKLGLAWMYDQPVLMEKEKDDKEVKFEWQRKYNAPRESYCKNSSDIVDQPFAIEVRNVRCMRCRQWGHLNTDRICPLFGQSFTNEPSITDSITVDHVQKGLQKEGLMLKRGTELDRYTNILSKAKQAVKGASKTDIEEEDSLAMEFLQNLSERQREKLLRKLSD 227
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: W6UNH9 (Corepressor interacting with RBPJ OS=Echinococcus granulosus OX=6210 GN=EGR_05298 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.048e-65 Identity = 109/225 (48.44%), Postives = 147/225 (65.33%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKR 727 MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L EQ IL ++ +GD+ A +GL+WMY+QP ++E K+ + E KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT + L K + GL K A S V S +DP E + ++F+ +L EK+R Sbjct: 1 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKETDRNEAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQR 221
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Match: A0A068WRV0 (Corepressor interacting with RBPJ 1 OS=Echinococcus granulosus OX=6210 GN=EgrG_000257500 PE=4 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.619e-65 Identity = 109/225 (48.44%), Postives = 147/225 (65.33%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVX--XXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASV------------VPSIRVVDPSERSENKGYSEIIDFINNLPEKKR 727 MGKGY+N+M KKFFHPT+ ENIKRKWMAEQK++F+ K+E + L EQ IL ++ +GD+ A +GL+WMY+QP ++E K+ + E KFEWQR YNAPRE YCK SSD+ DQPFGIEVRNVRC+RC QWGH+N+D+ CP++ Q+ ++EPT + L K + GL K A S V S +DP E + ++F+ +L EK+R Sbjct: 8 MGKGYNNYMCKKFFHPTNFENIKRKWMAEQKEEFDSKREQERLTQYRREQEILENRVLLGDEKARLGLAWMYDQPAVMEPEKETDRNEAKFEWQRKYNAPRESYCKNSSDVTDQPFGIEVRNVRCMRCKQWGHLNTDRTCPLYGQSFTQEPTAGTLRSLDRAKSNLRKEGLAFKKSAESTGLNAIVYKAKRAVSSSHGLDP----EAVEHELTVEFLRSLSEKQR 228
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182]) HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39 Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ W+AEQK FEKKK+ DL+ A EQ ++ MGD GL++MYE P K+E + E + + APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F T P++ ++++ M ++G L K + + V DP++ + + ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182]) HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39 Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ W+AEQK FEKKK+ DL+ A EQ ++ MGD GL++MYE P K+E + E + + APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F T P++ ++++ M ++G L K + + V DP++ + + ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:103030182]) HSP 1 Score: 145.206 bits (365), Expect = 3.327e-39 Identity = 87/233 (37.34%), Postives = 130/233 (55.79%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYN----APREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER--SENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S NIK+ W+AEQK FEKKK+ DL+ A EQ ++ MGD GL++MYE P K+E + E + + APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP+F T P++ ++++ M ++G L K + + V DP++ + + ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEQDGDESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSMATDEAGPSMHPSELMAE----MRNSGFALKK--CVLGRNATVCDPAQEFVASEEEEDPEVEFLRSLTTKQKQKLLRKL 227
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Sea Lamprey
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]) HSP 1 Score: 159.844 bits (403), Expect = 1.079e-45 Identity = 89/234 (38.03%), Postives = 133/234 (56.84%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNY------NAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFN---------QTMSKEPTIEDFKIL-SMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKL 748 MGK + NFM KK FHP S ENIKR WMAEQK FEKKK+ +LL EQ I ++ MGD+ GL++MYE P K+ + +K+ ++ Y APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++ T EP + ++ M+ G L ++ + PS ++++ E + + ++F+ +L K++ K + KL Sbjct: 1 MGKSFANFMCKKDFHPASKENIKRVWMAEQKVAFEKKKQDELLTQYTKEQEIYNNRLLMGDERVKNGLNFMYEAPPGTYKEIKKKQKETGGEKEYKFEWQKGAPREKYAKDDDNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLYGLSGINATSATTDEPEPAMHPSDLMVEMRSSGFALKQCVLGRKGDAADPSQQLIESEEDEDPE-----VEFLKSLTTKQKRKLLRKL 229
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Nematostella
Match: EDO37265 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SG80]) HSP 1 Score: 114.775 bits (286), Expect = 2.060e-30 Identity = 84/226 (37.17%), Postives = 122/226 (53.98%), Query Frame = 2 Query: 104 GYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQN-ILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXX----WQRNYNAPREEYCKGSS-DINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQ--TMSKEP-TIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSER---SENKGYSEIIDFINNLPEKKRNKFVTK 745 + FM+KK FHP S NIK+ WMAEQK EK KE D+ + EQ + + D+ GL +MYE P EK + EK+ E WQ+ APRE Y K + I DQPFGI VRNV+C+RC +WGHVN+D+ CPM N+ + +P T D + M S+GL L + + DP+++ S+N+ +F+ +L +K++ K + + Sbjct: 2 AFAKFMNKKDFHPGSKWNIKKVWMAEQKALSEKTKEQDMAYQYKKEQERYQNRTMITKDEKLKAGLGFMYEAPPGYEKDKLPKEKEEEPRFEWQKG--APREAYAKDLNLAIRDQPFGIPVRNVKCIRCGKWGHVNTDRECPMLNKVSVANYDPTTFADVADPAQLMEDMRSDGLALKQSVLGR--TFNPKDPNQQILASDNEEEDPEAEFLASLTDKQKRKLLRR 223
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351]) HSP 1 Score: 143.665 bits (361), Expect = 4.952e-39 Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + N+M KK FHP S NIK+ WMAEQK F+K+K+ DL+ A EQ ++ MGD GL++MYE P E E KFEWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++ Sbjct: 1 MGKSFANYMCKKDFHPASKSNIKKVWMAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPP----GEGQEECKFEWQK--TAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 135
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351]) HSP 1 Score: 142.895 bits (359), Expect = 8.154e-39 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX----XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MGK + N+M KK FHP S NIK+ WMAEQK F+K+K+ DL+ A EQ ++ MGD GL++MYE P K+E E + EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++ Sbjct: 1 MGKSFANYMCKKDFHPASKSNIKKVWMAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEEGQEECKFEWQK--TAPREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 143
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Match: si:ch73-167c12.2 (corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:101161351]) HSP 1 Score: 110.923 bits (276), Expect = 3.043e-27 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 2 Query: 173 MAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXX----XWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMF 517 MAEQK F+K+K+ DL+ A EQ ++ MGD GL++MYE P K+E E + EWQ+ APRE+Y K +I DQPFGI+VRNVRC++CH+WGHVN+D+ CP++ Sbjct: 1 MAEQKLTFDKRKQEDLMQAYLKEQETYNNRLLMGDDRVKNGLNFMYEAPPGASKEETKEEGQEECKFEWQKT--APREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLY 117
BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Match: SMESG000027503.1 (SMESG000027503.1) HSP 1 Score: 468.003 bits (1203), Expect = 3.391e-168 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILXXXXXXXXXXXXXXXXXXXXXXCSRDRSQRRHS 883 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKCSRDRSQRRHS Sbjct: 1 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKCSRDRSQRRHS 263
BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Match: SMESG000027499.1 (SMESG000027499.1) HSP 1 Score: 456.062 bits (1172), Expect = 1.744e-163 Identity = 258/263 (98.10%), Postives = 260/263 (98.86%), Query Frame = 2 Query: 95 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQNILTKKIAMGDKHAIMGLSWMYEQPTIVXXXXXXXXXXXXWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKQAASVVPSIRVVDPSERSENKGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILXXXXXXXXXXXXXXXXXXXXXXCSRDRSQRRHS 883 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEK KESDLLAAREAEQN+LTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSK AASVVPSIRVVDPSERSEN+GYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRK SRDRSQRRHS Sbjct: 1 MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKNKESDLLAAREAEQNMLTKKIAMGDKHAIMGLSWMYEQPTIVEKKEETGEKKFEWQRNYNAPREEYCKGSSDINDQPFGIEVRNVRCLRCHQWGHVNSDKICPMFNQTMSKEPTIEDFKILSMQKLGMLSNGLQLSKPAASVVPSIRVVDPSERSENQGYSEIIDFINNLPEKKRNKFVTKLKEWRHLNKKEILKKLDKYMDKKKHKKNKRDKPRKRSRDRSQRRHS 263 The following BLAST results are available for this feature:
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 4
BLAST of Corepressor interacting with RBPJ 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Corepressor interacting with RBPJ 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of Corepressor interacting with RBPJ 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30021151 ID=SMED30021151|Name=Corepressor interacting with RBPJ 1|organism=Schmidtea mediterranea sexual|type=transcript|length=952bpback to top protein sequence of SMED30021151-orf-1 >SMED30021151-orf-1 ID=SMED30021151-orf-1|Name=SMED30021151-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=264bp MGKGYHNFMSKKFFHPTSGENIKRKWMAEQKDDFEKKKESDLLAAREAEQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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