KH domain-containing protein

Overview


Name	KH domain-containing protein
Smed ID	SMED30020829
Length (bp)	953

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of KH domain-containing protein (SMED30020829) t-SNE clustered cells

Violin plots show distribution of expression levels for KH domain-containing protein (SMED30020829) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of KH domain-containing protein (SMED30020829) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for KH domain-containing protein (SMED30020829) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30020829

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30020829	SMESG000069949.1	dd_Smed_v4_11601_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30020829	SMESG000069949.1	dd_Smed_v4_11601_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30020829	SMESG000069949.1	dd_Smed_v4_11601_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30020829	SMESG000069949.1	dd_Smed_v4_11601_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 124.02 bits (310), Expect = 1.816e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 124.02 bits (310), Expect = 1.883e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 124.02 bits (310), Expect = 2.089e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 124.02 bits (310), Expect = 2.089e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Human
Match: QKI (QKI, KH domain containing RNA binding [Source:HGNC Symbol;Acc:HGNC:21100])

HSP 1 Score: 123.25 bits (308), Expect = 3.901e-32
Identity = 74/201 (36.82%), Postives = 116/201 (57.71%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: gld-1 (Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339])

HSP 1 Score: 137.887 bits (346), Expect = 5.263e-37
Identity = 81/224 (36.16%), Postives = 125/224 (55.80%), Query Frame = 1

Query:   73 SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKR 744
            S+F     + I++        E T+EYL +L+++ K +     + SN ++RLL+ EI   R  LF  ++     R  LP   A + + IT+K+ VP +  P YNF+GRILGP G+T KQ+E++  CKI +RG+GS+R+  KE   + K N  + +DDLH+++     E+    + ++A   +K L   A   +   DE K+ QLME AI+ GTYR M   N  R
Sbjct:  131 SLFSPTATEPIEV--------EATVEYLADLVKEKKHLTLFPHMFSN-VERLLDDEIGRVRVALFQTEF----PRVELPE-PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGT---DELKRKQLMELAIINGTYRPMKSPNPAR 337

[Close]

Query:   73 SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKR 744
            S+F     + I++        E T+EYL +L+++ K +     + SN ++RLL+ EI   R  LF  ++     R  LP   A + + IT+K+ VP +  P YNF+GRILGP G+T KQ+E++  CKI +RG+GS+R+  KE   + K N  + +DDLH+++     E+    + ++A   +K L   A   +   DE K+ QLME AI+ GTYR M   N  R
Sbjct:  131 SLFSPTATEPIEV--------EATVEYLADLVKEKKHLTLFPHMFSN-VERLLDDEIGRVRVALFQTEF----PRVELPE-PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGT---DELKRKQLMELAIINGTYRPMKSPNPAR 337

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 129.413 bits (324), Expect = 7.989e-35
Identity = 73/196 (37.24%), Postives = 118/196 (60.20%), Query Frame = 1

Query:  133 EEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSA-TENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR 717
            ++ + EYL +LL+D K +     +  ++++RL + EI   R +LF  ++    S+ES P   A  ++ + T+K+ VP   +P YNF+GRILGP G+T KQ+E+E  CKI +RGRGS+R+ +KE+  + K N  +  ++LH++I     E+ A+ +   A   ++ L    V     ED+ K+ QLME AI+ GTYR
Sbjct:   24 QQYSAEYLSQLLKDKKQLAAFPNVF-HHLERLADEEINKVRVVLFQCEF----SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 129.413 bits (324), Expect = 2.852e-34
Identity = 73/196 (37.24%), Postives = 118/196 (60.20%), Query Frame = 1

Query:  133 EEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSA-TENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR 717
            ++ + EYL +LL+D K +     +  ++++RL + EI   R +LF  ++    S+ES P   A  ++ + T+K+ VP   +P YNF+GRILGP G+T KQ+E+E  CKI +RGRGS+R+ +KE+  + K N  +  ++LH++I     E+ A+ +   A   ++ L    V     ED+ K+ QLME AI+ GTYR
Sbjct:   24 QQYSAEYLSQLLKDKKQLAAFPNVF-HHLERLADEEINKVRVVLFQCEF----SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Match: asd-2 (RNA-binding protein asd-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF1])

HSP 1 Score: 129.413 bits (324), Expect = 5.466e-34
Identity = 73/196 (37.24%), Postives = 118/196 (60.20%), Query Frame = 1

Query:  133 EEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSA-TENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR 717
            ++ + EYL +LL+D K +     +  ++++RL + EI   R +LF  ++    S+ES P   A  ++ + T+K+ VP   +P YNF+GRILGP G+T KQ+E+E  CKI +RGRGS+R+ +KE+  + K N  +  ++LH++I     E+ A+ +   A   ++ L    V     ED+ K+ QLME AI+ GTYR
Sbjct:   66 QQYSAEYLSQLLKDKKQLAAFPNVF-HHLERLADEEINKVRVVLFQCEF----SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 253

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0084178)

HSP 1 Score: 137.502 bits (345), Expect = 2.372e-37
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0100514)

HSP 1 Score: 137.117 bits (344), Expect = 3.176e-37
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0301402)

HSP 1 Score: 137.502 bits (345), Expect = 4.061e-37
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0084177)

HSP 1 Score: 137.502 bits (345), Expect = 4.442e-37
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. Ensembl Fly
Match: how (gene:FBgn0264491 transcript:FBtr0301401)

HSP 1 Score: 137.502 bits (345), Expect = 4.442e-37
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qki2 (QKI, KH domain containing, RNA binding 2 [Source:NCBI gene;Acc:393815])

HSP 1 Score: 121.324 bits (303), Expect = 1.062e-31
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T +    LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPD-AVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qki2 (QKI, KH domain containing, RNA binding 2 [Source:NCBI gene;Acc:393815])

HSP 1 Score: 121.324 bits (303), Expect = 1.092e-31
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T +    LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPD-AVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54])

HSP 1 Score: 120.168 bits (300), Expect = 4.340e-31
Identity = 75/202 (37.13%), Postives = 115/202 (56.93%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T++    LP  +    V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV             A+N  +     AV ++  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSSELPD-AVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITV-----------EDAQNRAEIKLKRAVEEAEGEDSLKKMQLMELAILNGTYRDANIKS 203

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qkia (QKI, KH domain containing, RNA binding a [Source:NCBI gene;Acc:30471])

HSP 1 Score: 119.783 bits (299), Expect = 5.988e-31
Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQK---YVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            +YL +LL + K + +L  +     +++RLL+ EI   R  +++      V K   E LP       V + +KL VPV   P YNF+GRILGP GLT KQ+E E  CKI +RGR S+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + R A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K
Sbjct:   17 DYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSVNGLVDKHPLE-LPE-PVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDTNIK 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Match: qkia (QKI, KH domain containing, RNA binding a [Source:NCBI gene;Acc:30471])

HSP 1 Score: 119.783 bits (299), Expect = 6.119e-31
Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQK---YVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            +YL +LL + K + +L  +     +++RLL+ EI   R  +++      V K   E LP       V + +KL VPV   P YNF+GRILGP GLT KQ+E E  CKI +RGR S+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + R A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K
Sbjct:   17 DYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSVNGLVDKHPLE-LPE-PVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDTNIK 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 117.472 bits (293), Expect = 5.234e-30
Identity = 76/203 (37.44%), Postives = 116/203 (57.14%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRES-LPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L        +++RLL+ EI   R  +++        + R S LP       V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSELPD-GIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANLKS 212

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 108.997 bits (271), Expect = 1.649e-26
Identity = 85/274 (31.02%), Postives = 137/274 (50.00%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRES-LPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRN---------------VQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK-----RQMIQSSYFTTPVISG-SISPMLFYSQLSAQIP 885
            T +YL +L+ D K + +L        +++RLL+ EI   R  +++        + R S LP       V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+               + KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +   +       ++  +   TP  +G ++ P++   Q +A +P
Sbjct:   38 TPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSELPD-GIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKAVTNILECSILALNKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANLKSPALAFSLAATAQAPRIITGPAPVLPPAALRTPTPAGPTLMPLIRQIQTAAVMP 304

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 108.997 bits (271), Expect = 1.792e-26
Identity = 85/274 (31.02%), Postives = 137/274 (50.00%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRES-LPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRN---------------VQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK-----RQMIQSSYFTTPVISG-SISPMLFYSQLSAQIP 885
            T +YL +L+ D K + +L        +++RLL+ EI   R  +++        + R S LP       V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+               + KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +   +       ++  +   TP  +G ++ P++   Q +A +P
Sbjct:   38 TPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSELPD-GIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKAVTNILECSILALNKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANLKSPALAFSLAATAQAPRIITGPAPVLPPAALRTPTPAGPTLMPLIRQIQTAAVMP 304

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: spsb3 (splA/ryanodine receptor domain and SOCS box containing 3 [Source:Xenbase;Acc:XB-GENE-971062])

HSP 1 Score: 97.0561 bits (240), Expect = 1.080e-22
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRES-LPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVS 645
            T +YL +L+ D K + +L        +++RLL+ EI   R  +++        + R S LP       V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L   AVS
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTSELPD-GIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAVS 185

[Close]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Match: pdc (phosducin [Source:Xenbase;Acc:XB-GENE-983832])

HSP 1 Score: 75.0998 bits (183), Expect = 9.866e-15
Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 1

Query:  328 NVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNT--NNQQDDLHLIITVTGD--ESYAR--NQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMS 726
            N+ + +++L+PV L P +NF+G+ILGP G T+K+++ E   KI + G+GS+R+  KE+  +   +   ++   DLH+ I V G   ESY R  +     + ++  L  E+ S     D+  Q Q ME + + G   E S
Sbjct:   58 NMKLKERILIPVKLYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYSHLNMDLHVFIEVFGPPCESYTRMAHAMEEVKKFLVPLTPESFSYQDMMDDICQEQFMELSYLNGAPPEQS 196

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 124.02 bits (310), Expect = 1.247e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 124.02 bits (310), Expect = 1.434e-32
Identity = 82/248 (33.06%), Postives = 133/248 (53.63%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRD---ANIKSPALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Qk (quaking [Source:MGI Symbol;Acc:MGI:97837])

HSP 1 Score: 123.635 bits (309), Expect = 2.817e-32
Identity = 81/248 (32.66%), Postives = 134/248 (54.03%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+    +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS---PALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Match: Khdrbs3 (KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312])

HSP 1 Score: 67.0106 bits (162), Expect = 1.964e-13
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1

Query:  337 ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTN--NQQDDLHLIITVTGD--ESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKG 708
            + QK+L+PV   P +NF+G++LGP G +LK+++ E   K+ I G+GS+R+  KE+  +        +  DDLH++I V     E+YAR    + E   K L  +        DE +Q QL E   + G
Sbjct:    3 LGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYAR-MGHALEEIKKFLIPDY------NDEIRQAQLQELTYLNG 123

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|O01367|HOW_DROME (Protein held out wings OS=Drosophila melanogaster OX=7227 GN=how PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.453e-36
Identity = 80/214 (37.38%), Postives = 127/214 (59.35%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSK 789
            +YL +LL+D K +     + ++ ++RLL+ EI   R  LF    V K+   +LP    +  V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  +   A   ++ L    V ++  EDE K+ QLME AI+ GTYR+ + K+     +++     +SDS+
Sbjct:   77 DYLAQLLKDRKQLAAFPNVFTH-VERLLDEEIARVRASLFQINGVKKEPL-TLPEPEGS-VVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSR 284

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q17339|GLD1_CAEEL (Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans OX=6239 GN=gld-1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.695e-36
Identity = 81/224 (36.16%), Postives = 125/224 (55.80%), Query Frame = 1

Query:   73 SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKR 744
            S+F     + I++        E T+EYL +L+++ K +     + SN ++RLL+ EI   R  LF  ++     R  LP   A + + IT+K+ VP +  P YNF+GRILGP G+T KQ+E++  CKI +RG+GS+R+  KE   + K N  + +DDLH+++     E+    + ++A   +K L   A   +   DE K+ QLME AI+ GTYR M   N  R
Sbjct:  131 SLFSPTATEPIEV--------EATVEYLADLVKEKKHLTLFPHMFSN-VERLLDDEIGRVRVALFQTEF----PRVELPE-PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGT---DELKRKQLMELAIINGTYRPMKSPNPAR 337

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|G5EFF1|ASD2_CAEEL (RNA-binding protein asd-2 OS=Caenorhabditis elegans OX=6239 GN=asd-2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.953e-33
Identity = 73/196 (37.24%), Postives = 118/196 (60.20%), Query Frame = 1

Query:  133 EEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSA-TENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR 717
            ++ + EYL +LL+D K +     +  ++++RL + EI   R +LF  ++    S+ES P   A  ++ + T+K+ VP   +P YNF+GRILGP G+T KQ+E+E  CKI +RGRGS+R+ +KE+  + K N  +  ++LH++I     E+ A+ +   A   ++ L    V     ED+ K+ QLME AI+ GTYR
Sbjct:   66 QQYSAEYLSQLLKDKKQLAAFPNVF-HHLERLADEEINKVRVVLFQCEF----SKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL---VPAPEGEDDLKRKQLMELAIINGTYR 253

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5W9D5|QKI_PIG (Protein quaking OS=Sus scrofa OX=9823 GN=QKI PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.970e-31
Identity = 81/248 (32.66%), Postives = 134/248 (54.03%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+    +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS---PALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9QYS9|QKI_MOUSE (Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.970e-31
Identity = 81/248 (32.66%), Postives = 134/248 (54.03%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVI-ITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKR------QMIQSSYFTTPVISG-SISPML 855
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++        + S     A   ++ + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+    +  F+    +  + R       ++  +   TP  +G +I P++
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS---PALAFSLAATAQAAPRIITGPAPVLPPAALRTPTPAGPTIMPLI 255

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A1I8HVJ9 (KH domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.312e-39
Identity = 82/204 (40.20%), Postives = 128/204 (62.75%), Query Frame = 1

Query:  127 NVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIIT--QKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            ++ +IT EYL ELL+D K + +L  +  N++ ++LE EI   R  LFH     K++ + LP     E  I+T  +K+ +PV  NP+YNF+GR+LGP G+T KQ+E + DCKI +RG+GS+R+ +KE   + K N  +  ++LH++I V   ++ A  + + A   IK+  ++AV     ED+ K+ QLME AI+ GTYR+ S K
Sbjct:   57 SLPKITPEYLQELLKDKKNLQSLPNLF-NHLDKILETEITRVRSQLFHFNGA-KRASDDLPE---GEGPIVTVQEKVFIPVKDNPSYNFVGRLLGPRGMTAKQLETDLDCKIMVRGKGSMRDKKKEDQNRGKPNWEHLAEELHVLICVEDHQNRAEMKAKRAAEEIKAFLEQAVKMPDGEDDLKKKQLMELAIINGTYRDTSKK 255

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A1I8GFL6 (KH domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.216e-39
Identity = 82/204 (40.20%), Postives = 128/204 (62.75%), Query Frame = 1

Query:  127 NVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIIT--QKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            ++ +IT EYL ELL+D K + +L  +  N++ ++LE EI   R  LFH     K++ + LP     E  I+T  +K+ +PV  NP+YNF+GR+LGP G+T KQ+E + DCKI +RG+GS+R+ +KE   + K N  +  ++LH++I V   ++ A  + + A   IK+  ++AV     ED+ K+ QLME AI+ GTYR+ S K
Sbjct:   57 SLPKITPEYLQELLKDKKNLQSLPNLF-NHLDKILETEITRVRSQLFHFNGA-KRASDDLPE---GEGPIVTVQEKVFIPVKDNPSYNFVGRLLGPRGMTAKQLETDLDCKIMVRGKGSMRDKKKEDQNRGKPNWEHLAEELHVLICVEDHQNRAEMKAKRAAEEIKAFLEQAVKMPDGEDDLKKKQLMELAIINGTYRDTSKK 255

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A5J4NVX1 (Protein quaking OS=Paragonimus westermani OX=34504 GN=DEA37_0007604 PE=4 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.006e-36
Identity = 87/228 (38.16%), Postives = 135/228 (59.21%), Query Frame = 1

Query:  130 VEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR-EMSFKNHKRNSKD-FNTDFNSSDSKRQMIQS 807
            V + T EYL +LL+D K + N   I  + ++ +LE+EI   R  LFH     ++S   LP   A     + +K+ VPV  NP YNF+GR+LGP GLT KQ+E++ +CKI +RGRGS+R+ +KE   + K+N  +  +DLH++++V   E+ A  + R A   I++  ++ V     ED  K++QLME AI+ GTYR EM  +N   N+    + + N  DS+ ++  S
Sbjct:   15 VHKATPEYLQDLLKDKKQLQNFPNIFLH-LEIILEKEITRVRERLFHLNESFRKSENELPE-PAGNITTLQEKVFVPVKENPNYNFVGRLLGPRGLTAKQLEQDLECKIMVRGRGSLRDKKKEDMNRGKSNWEHLDEDLHVLVSVEDFENRAAIKLRRATETIRTFLEQGVRTPNGEDVLKRHQLMELAIINGTYRSEMHHENLISNAASPLSDEINLKDSEHEIAGS 240

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A182WGB8 (KH domain-containing protein OS=Anopheles minimus OX=112268 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.941e-36
Identity = 86/217 (39.63%), Postives = 130/217 (59.91%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQM 798
            +YL +LL+D K +     +  + ++RLL+ EI   R  LFH   VTK+  + LP     E++ + +K+ VPV   P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  + + A + +K L    V  +  EDE K+ QLME AI+ GTYR+ + K    ++  FN D   SD + +M
Sbjct:   23 DYLAQLLKDRKQLAAFPNVFLH-MERLLDEEIAKVRASLFHINGVTKEPLQ-LPEPEG-ESITMNEKVYVPVKEYPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRASIKLKRALDEVKKLL---VPHAEGEDELKKRQLMELAIINGTYRDSTTKVAPADNT-FNFDQQFSDERWKM 232

[Close]

BLAST of KH domain-containing protein vs. TrEMBL
Match: A0A2M3Z8P1 (Putative rna-binding protein sam68 OS=Anopheles braziliensis OX=58242 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.470e-36
Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            +YL +LL+D K +     +   +++RLL+ EI   R  LFH   VTK+  + LP     E V + +K+ VPV  +P +NF+GRILGP G+T KQ+E+E  CKI +RG+GS+R+ +KE   + K N  +  DDLH++ITV   E+ A  + + A   +K L    V  +  EDE K+ QLME AI+ GTYR+ + K
Sbjct:   22 DYLAQLLKDRKQLAAFPNVF-QHVERLLDEEISKVRASLFHINGVTKEPLQ-LPDPDG-ETVTLNEKVYVPVKEHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRASIKLKRALEEVKKLL---VPHAEGEDELKKRQLMELAIINGTYRDSTAK 210

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 121.324 bits (303), Expect = 1.070e-31
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T +    LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPD-AVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 121.324 bits (303), Expect = 1.084e-31
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T +    LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPD-AVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qki2 (protein quaking-B [Source:NCBI gene;Acc:103029551])

HSP 1 Score: 120.939 bits (302), Expect = 2.211e-31
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            T +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T +    LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + + A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   14 TPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEIGRVRKDMYNDTLNGSTDKRTSELPD-AVGPIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qkib (QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54])

HSP 1 Score: 118.627 bits (296), Expect = 1.105e-30
Identity = 73/200 (36.50%), Postives = 115/200 (57.50%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFHQKY--VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKN 735
            +YL +L+ D K + +L       N+++RLL+ EI   R  +++      T++    LP  +    V + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +K +  + K N  +  +DLH++ITV   ++ A  + + A   +  L    V  +  ED  K+ QLME AI+ GTYR+ + K+
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSSELPD-AVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKVRANRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLL---VPAAEGEDSLKKMQLMELAILNGTYRDANIKS 211

[Close]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Match: qkia (QKI, KH domain containing, RNA binding a [Source:NCBI gene;Acc:30471])

HSP 1 Score: 111.694 bits (278), Expect = 6.113e-28
Identity = 75/200 (37.50%), Postives = 112/200 (56.00%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQIVS--NNIKRLLEREIMISRHILFH---QKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFK 732
            +YL +LL + K + +L  +     +++RLL+ EI   R  +++      V K   E LP       V + +KL VP      YNF+GRILGP GLT KQ+E E  CKI +RG+ S+R+ +KE+  + K N  +  +DLH++ITV   ++ A  + R A   +K L    V  +  ED  K+ QLME AI+ GTYR+ + K
Sbjct:   17 DYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYNDSVSGLVDKHPME-LPDAHGP-IVHLQEKLFVP------YNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQARAEIKMRRAVEEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRDTNIK 205

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: sf1 (splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492])

HSP 1 Score: 75.0998 bits (183), Expect = 2.450e-15
Identity = 54/179 (30.17%), Postives = 91/179 (50.84%), Query Frame = 1

Query:  202 IVSNNIKRLLERE------IMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYRE 720
            I +N  KRL  RE      I   RH+L  + Y      +  P         I++++++P   +P  NFIG I+GP G TLK+IE+E + KI IRG+GSV+  + +   K       + + LH ++T +      ++  R A + IK++  + +     ++E ++ QL E A + GT R+
Sbjct:  156 IYNNEGKRLNTREYRTRKKIEDDRHVLIQEMYRLNPDYKP-PADYKPPAQKISERIMIPQDEHPDINFIGLIIGPRGNTLKKIEKECNAKIMIRGKGSVK--EGKIGHKPGQPLPGEDEPLHALVTAS-----TQDNVRKAVDQIKNILKQGIEVPEGQNELRRMQLRELARLNGTLRD 326

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: KHDRBS3 (KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117])

HSP 1 Score: 71.2478 bits (173), Expect = 1.108e-14
Identity = 42/134 (31.34%), Postives = 74/134 (55.22%), Query Frame = 1

Query:  313 VSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTN--NQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKG 708
            V +  NV + +++++PV  +P +NFIG++LGP G +LK+++ E   K+ I G+GS+R+  KE+  +        +  +DLH++I V    S A  +   A + +K       +     DE +Q QL E + +KG
Sbjct:   29 VVSNRNVKLIERVIIPVRQHPKFNFIGKLLGPRGNSLKRLKEETGTKLSILGKGSMRDRDKEEDLRKSGEAKYAHLNEDLHVLIEVFAPPSQAYRRMGHALDEVKKYLVPDYN-----DEIRQQQLRELSFLKG 157

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs2 (KH domain containing, RNA binding, signal transduction associated 2 [Source:NCBI gene;Acc:768147])

HSP 1 Score: 64.3142 bits (155), Expect = 5.712e-12
Identity = 37/129 (28.68%), Postives = 74/129 (57.36%), Query Frame = 1

Query:  328 NVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRN--VQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKG 708
            N+ + +++++P   +P +NF+G++LGP G +LK+++ E   K+ I G+GS+R+  +++E     +N   +  ++LH++I V    S A ++   A + +K       +     DE +Q QL E + +KG
Sbjct:   34 NMKLAERVIIPAKQHPKFNFVGKLLGPRGNSLKRMQEETGTKMSILGKGSMRDKALEEEMRKSGENKYAHLSEELHVLIEVFAPPSEAYSRMGHALDEVKKYLVPDYN-----DEIRQEQLRELSFLKG 157

[Close]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Match: khdrbs1a (KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25])

HSP 1 Score: 62.3882 bits (150), Expect = 2.564e-11
Identity = 37/132 (28.03%), Postives = 69/132 (52.27%), Query Frame = 1

Query:  319 ATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTN--NQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKG 708
              +N  + +K+L+P   +P +NF+G++LGP G TLK+++ E   ++ I G+G +++  KE+  +        +  ++LH++I V      A ++   A   +K  F+   +     DE  Q QLME   + G
Sbjct:   55 GEQNFKLAEKVLIPAKQHPKFNFVGKLLGPQGNTLKRLQVETGTRMAIMGKGCMKDRAKEEELRNSGEAKYVHLNEELHVLIEVYAPLPEAYSRMGHALEEVKKFFNPDYN-----DEICQEQLMEMTYLNG 181

[Close]

BLAST of KH domain-containing protein vs. Ensembl Yeast
Match: MSL5 (Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000004106])

HSP 1 Score: 68.5514 bits (166), Expect = 2.085e-13
Identity = 43/140 (30.71%), Postives = 72/140 (51.43%), Query Frame = 1

Query:  346 KLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYRE-------MSFKNHKR 744
            K  +PV   P  NF+G +LGP G TL++++ + +CKI IRGRGSV+  + +          N +D LH +I    ++     + +      +++  +AV+    +++ K+ QL E A + GT RE          K+HKR
Sbjct:  151 KYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVK--EGKNASDLPPGAMNFEDPLHCLIIADSED-----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLREDNRPCPICGLKDHKR 283

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO30297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T170])

HSP 1 Score: 91.6633 bits (226), Expect = 2.762e-22
Identity = 58/173 (33.53%), Postives = 96/173 (55.49%), Query Frame = 1

Query:  220 KRLLEREIMISRHILFHQKY------VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYRE 720
            +RLL++EI   R+ LFH          T  +  SLP  S    V + +K+  PV   P +NF+GR++GP G+TL++IE    CK+ +RG+GS+++ + E+  + + N  +  +DLH++I+    E     +   A   ++SL    V +   EDE K+ QL + A++ GT RE
Sbjct:    9 ERLLDQEINKVRNELFHGATNGVDNGTTSIADLSLPAPSGP-RVKLVEKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKDKKLEEEKRGQPNYEHLDEDLHVLISCEDTEERCHTRLEKAVERVQSLL-RPVEEG--EDEIKKKQLKDLALLNGTLRE 177

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO28641 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T5W9])

HSP 1 Score: 68.1662 bits (165), Expect = 4.288e-14
Identity = 46/138 (33.33%), Postives = 72/138 (52.17%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVSNNIKRLLER-----------------EIMISRHILFHQKY------VTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRN 486
            T EYL+ELL D  T+  + +I  +  +RLL++                 EI   R+ LFH          T  +  SLP  S    V + +K+  PV   P +NF+GR++GP G+TL++IE    CK+ +RG+GS+++
Sbjct:    6 TSEYLNELLNDKTTVSKMPKIFLH-AERLLDQGHSWDKDVFLRINFPFTEINKVRNELFHGATNGVDNGTTSIADLSLPAPSGPR-VKLVEKVYAPVKEFPKFNFVGRVIGPRGMTLREIESTTGCKLLVRGKGSMKD 141

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO44127 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWI4])

HSP 1 Score: 63.5438 bits (153), Expect = 3.081e-12
Identity = 37/126 (29.37%), Postives = 67/126 (53.17%), Query Frame = 1

Query:  331 VIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQ--DDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIV 702
            V +++K+ +PV  +P +NF+G++LGP G T K+++     K+ I G+GS+R+ +KE+  +   +       ++LH++I V      A  +   A   IK      ++     DE  Q Q+ E AI+
Sbjct:   47 VKLSEKVFIPVKDHPKFNFVGKLLGPRGNTFKRLQNSTGTKMSILGKGSMRDKEKEEELRATEDPKYAHLGEELHVLIEVEAPPGQAHARLGIAIEEIKKYLIPEMN-----DEIHQEQMREMAIL 167

[Close]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Match: EDO45484 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSV9])

HSP 1 Score: 60.077 bits (144), Expect = 1.376e-10
Identity = 29/83 (34.94%), Postives = 51/83 (61.45%), Query Frame = 1

Query:  331 VIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDES 579
            + I  K+++P   NP  NFIG ++GP G TLK +E+E + KI IRG+GS+++ ++ +    +   + + + LH ++T    ES
Sbjct:  178 IKIQDKVMIPQDENPEVNFIGLLIGPRGNTLKNMEKETNAKIMIRGKGSIKDGKQGRGRDMQLMNSGEDEPLHALVTGPTAES 260

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000044982.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 121.324 bits (303), Expect = 1.262e-31
Identity = 85/261 (32.57%), Postives = 135/261 (51.72%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQI--VSNNIKRLLEREIMISRHILFHQ----KYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYF-------TTPVISGSISPMLFYSQLSAQIPQS 891
            +YL +L+ D K + +L     +  +++RLL+ EI   R  +++          +  E LP         + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV    + A+ + + A N +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F     +  + R +   +           PV + +I P++   Q SA +P +
Sbjct:   16 DYLMQLMNDRKVMSSLPNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEELPEAIGPV-AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRD---ANVKTPTATF--PLGTPQAPRIITGPTPVLPPSLRNPAPVTTPTIMPLIRQIQSSALVPGA 267

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000031315.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 120.939 bits (302), Expect = 1.501e-31
Identity = 85/261 (32.57%), Postives = 135/261 (51.72%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQI--VSNNIKRLLEREIMISRHILFHQ----KYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYF-------TTPVISGSISPMLFYSQLSAQIPQS 891
            +YL +L+ D K + +L     +  +++RLL+ EI   R  +++          +  E LP         + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV    + A+ + + A N +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F     +  + R +   +           PV + +I P++   Q SA +P +
Sbjct:   16 DYLMQLMNDRKVMSSLPNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEELPEAIGPV-AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRD---ANVKTPTATF--PLGTPQAPRIITGPTPVLPPSLRNPAPVTTPTIMPLIRQIQSSALVPGA 267

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000045137.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 120.553 bits (301), Expect = 1.534e-31
Identity = 87/262 (33.21%), Postives = 137/262 (52.29%), Query Frame = 1

Query:  148 EYLHELLRDYK---TIINLSQIVSNNIKRLLEREIMISRHILFHQ----KYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYF-------TTPVISGSISPMLFYSQLSAQIPQS 891
            +YL +L+ D K   ++ N S I ++ ++RLL+ EI   R  +++          +  E LP         + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV    + A+ + + A N +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F     +  + R +   +           PV + +I P++   Q SA +P +
Sbjct:   16 DYLMQLMNDRKVMSSLPNFSGIFTH-LERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEELPEAIGPV-AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRD---ANVKTPTATF--PLGTPQAPRIITGPTPVLPPSLRNPAPVTTPTIMPLIRQIQSSALVPGA 267

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000033069.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 120.553 bits (301), Expect = 2.785e-31
Identity = 87/262 (33.21%), Postives = 137/262 (52.29%), Query Frame = 1

Query:  148 EYLHELLRDYK---TIINLSQIVSNNIKRLLEREIMISRHILFHQ----KYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYF-------TTPVISGSISPMLFYSQLSAQIPQS 891
            +YL +L+ D K   ++ N S I ++ ++RLL+ EI   R  +++          +  E LP         + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV    + A+ + + A N +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F     +  + R +   +           PV + +I P++   Q SA +P +
Sbjct:   16 DYLMQLMNDRKVMSSLPNFSGIFTH-LERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEELPEAIGPV-AQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRD---ANVKTPTATF--PLGTPQAPRIITGPTPVLPPSLRNPAPVTTPTIMPLIRQIQSSALVPGA 267

[Close]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000027064.1 (protein quaking-B-like [Source:NCBI gene;Acc:101161529])

HSP 1 Score: 120.553 bits (301), Expect = 3.052e-31
Identity = 85/261 (32.57%), Postives = 136/261 (52.11%), Query Frame = 1

Query:  148 EYLHELLRDYKTIINLSQI--VSNNIKRLLEREIMISRHILFHQ----KYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYF-------TTPVISGSISPMLFYSQLSAQIPQS 891
            +YL +L+ D K + +L     +  +++RLL+ EI   R  +++          +  E LP  +      + +KL VPV   P +NF+GRILGP GLT KQ+E E  CKI +RG+GS+R+ +KE+  + K N  +  +DLH++ITV    + A+ + + A N +K L    V  +  ED  K+ QLME AI+ GTYR+    N K  +  F     +  + R +   +           PV + +I P++   Q SA +P +
Sbjct:   16 DYLMQLMNDRKVMSSLPNFSGIFTHLERLLDEEIGRVRKDMYNDTLNGGMFNGRDMEELPE-AIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEMNRGKPNWEHLNEDLHVLITVEDTHNRAKIKLQRAINEVKKLL---VPAAEGEDNLKKMQLMELAILNGTYRD---ANVKTPTATF--PLGTPQAPRIITGPTPVLPPSLRNPAPVTTPTIMPLIRQIQSSALVPGA 267

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000069949.1 (SMESG000069949.1)

HSP 1 Score: 593.578 bits (1529), Expect = 0.000e+0
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 1

Query:   73 SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYFTTPVISGSISPMLFYSQLSAQIPQSILPAIGYSCKLGVFDIK 942
            SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLP VSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYFTTPVISGSISPMLFYSQLSAQIPQSILPAIGYSCKLGVFDIK
Sbjct:    6 SIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPQVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYFTTPVISGSISPMLFYSQLSAQIPQSILPAIGYSCKLGVFDIK 295

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000068399.1 (SMESG000068399.1)

HSP 1 Score: 142.51 bits (358), Expect = 2.460e-39
Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 1

Query:  142 TIEYLHELLRD------YKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRE---SLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQSSYFTTPVISGSIS 846
            T EYL ELL+D      ++   N   +++     +LE+EI   R  LFH    + Q++    +LP     E V + +K+ VPV  NP YNFIGRILGP GLT KQ+E+E  CK+ IRG+GS+RN +KE   + K N  +  D LH+ ITV   E+ A  + + A + I+   ++ +     ED+ K+ QLME AI+ GTYR+ S K+   NSK   T  NS+    +    SY  + ++   +S
Sbjct:   24 TPEYLQELLQDKQKLQCFQPNFNFRHLLN-----ILEKEINRVREKLFHINGTSGQTKSIENALP-CPKGEYVTLQEKVYVPVDENPNYNFIGRILGPRGLTAKQLEQELQCKLMIRGKGSLRNKEKEDELRGKPNWEHLNDKLHINITVEDYENRAVIKLKWALDAIEKFIEQGIKMPDGEDDIKKRQLMELAIINGTYRDTSKKSQTPNSKS-ETKTNSTTVDGKPANFSYSNSSILPNYVS 260

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000080790.1 (SMESG000080790.1)

HSP 1 Score: 110.538 bits (275), Expect = 7.470e-28
Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 1

Query:  142 TIEYLHELLRDYKTIINLSQIVSNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIIT--QKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYR 717
            T +YL EL +D K+I  LS I   +   LL++EI + +                  + S  E  I++  +K+ +PV  NP YNF+GRILGP G T KQ+E++ DCKI IRGRGS+R+  KE+  + K N  +  +DLH++I ++  E+    +  + +  I S   E ++     D  KQ QLME +I+  + R
Sbjct:   14 TSDYLQELFKDKKSI-QLSGINFKHATNLLDKEIALVKE-----------------NFSIREGRIVSKQEKIFLPVKENPNYNFVGRILGPRGYTAKQLEQKLDCKIMIRGRGSMRDQNKEEQNRNKPNWEHLNEDLHVLINISDCENRVDEKMNTIKEAISSFIQEGLNTPESLDTLKQMQLMELSILNESDR 189

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000031862.1 (SMESG000031862.1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.319e-14
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 1

Query:  343 QKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNN-----QQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYRE 720
            +K+ +P    P  N IG I+GP GLTLK +E+E++ KI IRG+GS+ N         K N NN     + + LH  IT     S+++     A + I  +  E +     E++ ++NQ+ + AI+ GTYRE
Sbjct:  144 EKVFIPQDDYPDINLIGLIIGPRGLTLKDLEKEYNVKIIIRGKGSIHN--------GKVNVNNVPLPGEDECLHAYIT-----SFSKECVEKATDRINKIIQEGIDFPELENDLRKNQMKQLAILNGTYRE 261

[Close]

BLAST of KH domain-containing protein vs. Planmine SMEST
Match: SMESG000060577.1 (SMESG000060577.1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.559e-12
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 1

Query:  298 ESLPHVSATENVIITQKLLVPVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCFKTKNNTNNQQDD-LHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSIDEDEAKQNQLMEYAIVKGTYRE 720
            E +PH        I +++ +P    P  NF G I+GP G+T K++E+E   KI IRG+GS +  Q    F         +D+ LH  +T     S +R     A   I+ +  + +     +++ ++NQ+ + AI  GTYRE
Sbjct:  247 ELVPHADKMIGARIEERIFIPQEDYPDINFAGLIIGPRGMTQKELEKETGTKILIRGKGSAKPGQ----FNGDGAPLPGEDEPLHAYVT-----SMSRESVDKAAEKIRKIIQDGIEFPELQNDLRKNQMKQLAIFNGTYRE 379

The following BLAST results are available for this feature:

BLAST of KH domain-containing protein vs. Ensembl Human
BLAST of KH domain-containing protein vs. Ensembl Celegans
BLAST of KH domain-containing protein vs. Ensembl Fly
BLAST of KH domain-containing protein vs. Ensembl Zebrafish
BLAST of KH domain-containing protein vs. Ensembl Xenopus
BLAST of KH domain-containing protein vs. Ensembl Mouse
BLAST of KH domain-containing protein vs. UniProt/SwissProt
BLAST of KH domain-containing protein vs. TrEMBL
BLAST of KH domain-containing protein vs. Ensembl Cavefish
BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
BLAST of KH domain-containing protein vs. Ensembl Yeast
BLAST of KH domain-containing protein vs. Ensembl Nematostella
BLAST of KH domain-containing protein vs. Ensembl Medaka
BLAST of KH domain-containing protein vs. Planmine SMEST

BLAST of KH domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
QKI	1.816e-32	33.06	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	1.883e-32	33.06	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	2.089e-32	33.06	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	2.089e-32	33.06	QKI, KH domain containing RNA binding [Source:HGNC...	[more]
QKI	3.901e-32	36.82	QKI, KH domain containing RNA binding [Source:HGNC...	[more]

BLAST of KH domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
gld-1	5.263e-37	36.16	Female germline-specific tumor suppressor gld-1 [...	[more]
gld-1	5.263e-37	36.16	Female germline-specific tumor suppressor gld-1 [...	[more]
asd-2	7.989e-35	37.24	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
asd-2	2.852e-34	37.24	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]
asd-2	5.466e-34	37.24	RNA-binding protein asd-2 [Source:UniProtKB/Swiss...	[more]

BLAST of KH domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
how	2.372e-37	37.38	gene:FBgn0264491 transcript:FBtr0084178	[more]
how	3.176e-37	37.38	gene:FBgn0264491 transcript:FBtr0100514	[more]
how	4.061e-37	37.38	gene:FBgn0264491 transcript:FBtr0301402	[more]
how	4.442e-37	37.38	gene:FBgn0264491 transcript:FBtr0084177	[more]
how	4.442e-37	37.38	gene:FBgn0264491 transcript:FBtr0301401	[more]

BLAST of KH domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
qki2	1.062e-31	37.13	QKI, KH domain containing, RNA binding 2 [Source:N...	[more]
qki2	1.092e-31	37.13	QKI, KH domain containing, RNA binding 2 [Source:N...	[more]
qkib	4.340e-31	37.13	QKI, KH domain containing, RNA binding b [Source:Z...	[more]
qkia	5.988e-31	39.00	QKI, KH domain containing, RNA binding a [Source:N...	[more]
qkia	6.119e-31	39.00	QKI, KH domain containing, RNA binding a [Source:N...	[more]

BLAST of KH domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
spsb3	5.234e-30	37.44	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	1.649e-26	31.02	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	1.792e-26	31.02	splA/ryanodine receptor domain and SOCS box contai...	[more]
spsb3	1.080e-22	36.99	splA/ryanodine receptor domain and SOCS box contai...	[more]
pdc	9.866e-15	33.09	phosducin [Source:Xenbase;Acc:XB-GENE-983832]	[more]

BLAST of KH domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Qk	1.247e-32	33.06	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	1.434e-32	33.06	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	1.434e-32	33.06	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Qk	2.817e-32	32.66	quaking [Source:MGI Symbol;Acc:MGI:97837]	[more]
Khdrbs3	1.964e-13	34.38	KH domain containing, RNA binding, signal transduc...	[more]

BLAST of KH domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|O01367\|HOW_DROME	4.453e-36	37.38	Protein held out wings OS=Drosophila melanogaster ...	[more]
sp\|Q17339\|GLD1_CAEEL	6.695e-36	36.16	Female germline-specific tumor suppressor gld-1 OS...	[more]
sp\|G5EFF1\|ASD2_CAEEL	6.953e-33	37.24	RNA-binding protein asd-2 OS=Caenorhabditis elegan...	[more]
sp\|Q5W9D5\|QKI_PIG	1.970e-31	32.66	Protein quaking OS=Sus scrofa OX=9823 GN=QKI PE=2 ...	[more]
sp\|Q9QYS9\|QKI_MOUSE	1.970e-31	32.66	Protein quaking OS=Mus musculus OX=10090 GN=Qki PE...	[more]

BLAST of KH domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8HVJ9	3.312e-39	40.20	KH domain-containing protein OS=Macrostomum lignan...	[more]
A0A1I8GFL6	6.216e-39	40.20	KH domain-containing protein OS=Macrostomum lignan...	[more]
A0A5J4NVX1	1.006e-36	38.16	Protein quaking OS=Paragonimus westermani OX=34504...	[more]
A0A182WGB8	1.941e-36	39.63	KH domain-containing protein OS=Anopheles minimus ...	[more]
A0A2M3Z8P1	2.470e-36	41.54	Putative rna-binding protein sam68 OS=Anopheles br...	[more]

BLAST of KH domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
qki2	1.070e-31	37.13	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qki2	1.084e-31	37.13	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qki2	2.211e-31	37.13	protein quaking-B [Source:NCBI gene;Acc:103029551]	[more]
qkib	1.105e-30	36.50	QKI, KH domain containing, RNA binding b [Source:Z...	[more]
qkia	6.113e-28	37.50	QKI, KH domain containing, RNA binding a [Source:N...	[more]

BLAST of KH domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
sf1	2.450e-15	30.17	splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131...	[more]
KHDRBS3	1.108e-14	31.34	KH RNA binding domain containing, signal transduct...	[more]
khdrbs2	5.712e-12	28.68	KH domain containing, RNA binding, signal transduc...	[more]
khdrbs1a	2.564e-11	28.03	KH domain containing, RNA binding, signal transduc...	[more]

BLAST of KH domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
MSL5	2.085e-13	30.71	Component of commitment complex; which defines fir...	[more]

BLAST of KH domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4


Match Name	E-value	Identity	Description
EDO30297	2.762e-22	33.53	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO28641	4.288e-14	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO44127	3.081e-12	29.37	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45484	1.376e-10	34.94	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of KH domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000044982.1	1.262e-31	32.57	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000031315.1	1.501e-31	32.57	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000045137.1	1.534e-31	33.21	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000033069.1	2.785e-31	33.21	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]
ENSORLT00000027064.1	3.052e-31	32.57	protein quaking-B-like [Source:NCBI gene;Acc:10116...	[more]

BLAST of KH domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000069949.1	0.000e+0	99.66	SMESG000069949.1	[more]
SMESG000068399.1	2.460e-39	37.70	SMESG000068399.1	[more]
SMESG000080790.1	7.470e-28	35.57	SMESG000080790.1	[more]
SMESG000031862.1	1.319e-14	35.11	SMESG000031862.1	[more]
SMESG000060577.1	1.559e-12	30.28	SMESG000060577.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30020829 ID=SMED30020829|Name=KH domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=953bp
GTTTAACGTAATTAATTAAATTAATTGTCAAATCGTGTAAATGTCAAGAC
GAATAATATGAATGATAATAATTCAATATTTTGTGACTTCTGTAATAAAA
AGATCGACATTTCCATATTTCTAACAAATGTAGAAGAAATAACTATTGAA
TATCTTCACGAGCTTTTACGGGATTATAAAACAATCATCAATCTTTCACA
AATCGTGTCCAACAATATTAAACGACTTTTAGAAAGAGAAATAATGATAA
GTAGGCACATTTTGTTTCACCAAAAATATGTAACAAAGCAATCCCGTGAA
TCATTGCCCCATGTATCAGCCACAGAAAATGTAATTATAACACAGAAACT
CCTAGTTCCAGTTCACCTCAATCCTACATATAATTTTATTGGTCGGATTC
TCGGACCAGGCGGATTAACACTGAAACAAATTGAGCGAGAATTTGACTGT
AAGATAAAAATTCGAGGCCGAGGATCTGTGAGAAATGTTCAAAAGGAAAA
ATGTTTCAAAACGAAAAATAACACTAACAATCAACAAGATGATTTGCATT
TAATAATTACGGTCACAGGCGACGAATCGTACGCTCGAAACCAGACCAGG
TCCGCTGAAAATTATATCAAATCATTATTTGATGAAGCTGTTTCAAAATC
CATCGATGAAGATGAGGCAAAACAAAATCAGTTAATGGAATACGCAATCG
TTAAAGGGACATATAGAGAAATGTCTTTTAAGAATCACAAAAGAAACAGT
AAAGATTTCAATACCGACTTTAATTCGAGTGATTCTAAAAGGCAAATGAT
CCAGTCTTCATATTTTACAACCCCTGTTATTTCTGGTTCGATTTCTCCAA
TGCTTTTCTATAGTCAGTTATCAGCTCAAATACCCCAAAGCATTTTGCCA
GCCATTGGATATTCTTGTAAATTGGGAGTATTTGATATCAAATAAAATTG
AAT

protein sequence of SMED30020829-orf-1

>SMED30020829-orf-1 ID=SMED30020829-orf-1|Name=SMED30020829-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=296bp
MNDNNSIFCDFCNKKIDISIFLTNVEEITIEYLHELLRDYKTIINLSQIV
SNNIKRLLEREIMISRHILFHQKYVTKQSRESLPHVSATENVIITQKLLV
PVHLNPTYNFIGRILGPGGLTLKQIEREFDCKIKIRGRGSVRNVQKEKCF
KTKNNTNNQQDDLHLIITVTGDESYARNQTRSAENYIKSLFDEAVSKSID
EDEAKQNQLMEYAIVKGTYREMSFKNHKRNSKDFNTDFNSSDSKRQMIQS
SYFTTPVISGSISPMLFYSQLSAQIPQSILPAIGYSCKLGVFDIK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000101	muscle cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036612	KH_dom_type_1_sf
IPR004087	KH_dom
IPR004088	KH_dom_type_1
IPR032377	STAR_dimer

Vocabulary: **molecular function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003727	single-stranded RNA binding

Vocabulary: **biological process**
Term	Definition
GO:0006417	regulation of translation

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 92..192 e-value: 3.2E-8 score: 43.3
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 29..76 e-value: 2.5E-6 score: 27.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	G3DSA:3.30.1370.10		coord: 26..229 e-value: 3.1E-44 score: 153.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 95..220
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 96..145 e-value: 2.3E-7 score: 30.6
None	No IPR available	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 23..267
None	No IPR available	PANTHER	PTHR11208:SF90	PROTEIN QUAKING	coord: 23..267
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 99..187 score: 9.708