SMED30020811
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020811 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 33Note: Hover over icons to view figure legend
Alignments
SMED30020811 aligns in the following genomic locations:
Homology
BLAST of SMED30020811 vs. Ensembl Human
Match: LAMA2 (laminin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6482]) HSP 1 Score: 68.5514 bits (166), Expect = 8.702e-11 Identity = 108/502 (21.51%), Postives = 220/502 (43.82%), Query Frame = 3 Query: 423 EYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS------------RDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGE-KEVYFQNSK 1889 E L T + FE + L E+++ +++ + +T+ E++ + + + LKK++ ES +NEE+E++L +K A+ K K + + L + D + +L V + A+ ++E +E + KE +D ++ + +EI I + ++T+ ++ L K I +L +++K+ + S+ ESH LN + D E++ +S + N+K I+ A+ K+ K +++L + + L + LL+++ K ++ +FR +NE +K++ N VK N++ L+ ++ + +N +LLR + N+ G L I + +KL + ++ ++ N+ + + Q + + +D LKK N +D S N V + TVKN E L+++ K ++ ++LKK+ E KE+ Q K Sbjct: 1701 ETLGTRDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAA------------EALLKKVKKLFGESRGENEEMEKDLREKL---ADYKNKVDD-AWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLPPMSEELNDK---IDDLSQEIKDRKLAEKVSQAESHAAQLNDSSAVLDGILDEAK--NISFNATAAFKAYSNIKDYIDEAE-----KVAKEAKDLAHEATKL--ATGPRGLLKEDAKGCLQK--SFRILNE----------AKKLANDVKENEDHLNGLKTRIENADARNGDLLRTL--------------NDTLGKLSAIP---------NDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNNAVADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARK 2139
BLAST of SMED30020811 vs. Ensembl Human
Match: LAMA2 (laminin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6482]) HSP 1 Score: 67.781 bits (164), Expect = 1.532e-10 Identity = 107/502 (21.31%), Postives = 221/502 (44.02%), Query Frame = 3 Query: 423 EYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS------------RDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGE-KEVYFQNSK 1889 E L T + FE + L E+++ +++ + +T+ E++ + + + LKK++ ES +NEE+E++L +K A+ K K + + L + D + +L V + A+ ++E +E + KE +D ++ + +EI I + ++T+ ++ L K I +L +++K+ + S+ ESH LN + D E++ +S + N+K I+ A+ K+ K +++L + + L + LL+++ K ++ +FR +NE +K++ N VK N++ L+ ++ + +N +LLR + N+ G L I + +KL + ++ ++ N+ + + Q + + +D LKK N +D S N+ + + TVKN E L+++ K ++ ++LKK+ E KE+ Q K Sbjct: 1701 ETLGTRDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAA------------EALLKKVKKLFGESRGENEEMEKDLREKL---ADYKNKVDD-AWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLPPMSEELNDK---IDDLSQEIKDRKLAEKVSQAESHAAQLNDSSAVLDGILDEAK--NISFNATAAFKAYSNIKDYIDEAE-----KVAKEAKDLAHEATKL--ATGPRGLLKEDAKGCLQK--SFRILNE----------AKKLANDVKENEDHLNGLKTRIENADARNGDLLRTL--------------NDTLGKLSAIP---------NDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNKIIADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARK 2139
BLAST of SMED30020811 vs. Ensembl Human
Match: LAMA2 (laminin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6482]) HSP 1 Score: 63.929 bits (154), Expect = 1.957e-9 Identity = 108/502 (21.51%), Postives = 220/502 (43.82%), Query Frame = 3 Query: 423 EYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS------------RDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGE-KEVYFQNSK 1889 E L T + FE + L E+++ +++ + +T+ E++ + + + LKK++ ES +NEE+E++L +K A+ K K + + L + D + +L V + A+ ++E +E + KE +D ++ + +EI I + ++T+ ++ L K I +L +++K+ + S+ ESH LN + D E++ +S + N+K I+ A+ K+ K +++L + + L + LL+++ K + ++FR +NE +K++ N VK N++ L+ ++ + +N +LLR + N+ G L I + +KL + ++ ++ N+ + + Q + + +D LKK N +D S N V + TVKN E L+++ K ++ ++LKK+ E KE+ Q K Sbjct: 1701 ETLGTRDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAA------------EALLKKVKKLFGESRGENEEMEKDLREK---LADYKNKVDD-AWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLPPMSEELNDK---IDDLSQEIKDRKLAEKVSQAESHAAQLNDSSAVLDGILDEAK--NISFNATAAFKAYSNIKDYIDEAE-----KVAKEAKDLAHEATKL--ATGPRGLLKEDAKGCLQ--KSFRILNE----------AKKLANDVKENEDHLNGLKTRIENADARNGDLLRTL--------------NDTLGKLSAIP---------NDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKN-TVADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARK 2138
BLAST of SMED30020811 vs. Ensembl Human
Match: KTN1 (kinectin 1 [Source:HGNC Symbol;Acc:HGNC:6467]) HSP 1 Score: 48.521 bits (114), Expect = 8.199e-6 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 3 Query: 2805 NNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKI--------------CLKSSEQEQERL 3008 +E + +LE +LK+ E + L+++ + Y+ L +TE LQ +Q SV+QEEN WK+ SSEQE ERL Sbjct: 72 GSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERL 153
BLAST of SMED30020811 vs. Ensembl Celegans
Match: lam-3 (LAMinin related. See also lmb; Laminin alpha chain [Source:UniProtKB/TrEMBL;Acc:G5ECE3]) HSP 1 Score: 58.9214 bits (141), Expect = 2.617e-8 Identity = 82/389 (21.08%), Postives = 185/389 (47.56%), Query Frame = 3 Query: 600 DEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFS-QKLHKSEM-DLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQ-AKEKEITNLKKDLKNLNVQLTKSK---EESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQE-LLSQIELTKKEFTEQNTE------LLREIERLKQDYSVKVEVSNE-KSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS 1724 D L + E + ++ + E +E+ L + E+ + ++ ++ + QKL+++ DLK+ +++ ++ +D ++++K E+ S + Y++ NEIEK+R E + + NS++ A+ +E+ N+ +D + +N+ L + E+ N+TL +++ + + QT+ R +E LE +I D V + +EN +K H EN L+ + + E +++ +L S+ E + N+E L SQ+E K E + N + ++ E+++ K+D + ++ NE K+ +++ + ++K SS ++K ++H I + N + ++ + K + +K E+++ Sbjct: 1828 DGMLMEAEAHLNATVERGEYVEKRLNRAQQEHKKAEELLKMVTAQKLNETIFEDLKN---RIDVLEQWMNDYRETIYDVSKKDTADAERMSLVVGKRINRYKEVSNEIEKLRVE---AEDQIAYSRNSIEKARSEELMNMFEDKEKINMTLAELPDLVEQCQNITLLYSQLIDEYDEEYVQTAG------RHAEKLEVQAQKI----VDRFVDTRTETENPLKAS---HAYENIVEALKNATEAVDSAAEASEAVSK-----MLGSEGSESGD---ANEESLRSQLEKLKNESSLSNVDNSNAVKIVEELKKEKKDLTDRLGHLNELKTSIVKRLGVIKNEASSWDDKHDRMHSILK------NGAKTAHERSANVKKESEGIKTEVSA 2183
BLAST of SMED30020811 vs. Ensembl Zebrafish
Match: lama5 (laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]) HSP 1 Score: 53.1434 bits (126), Expect = 2.574e-6 Identity = 98/539 (18.18%), Postives = 212/539 (39.33%), Query Frame = 3 Query: 912 EIEKIRSEYKQMKTETVNLNNS------LQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTE-------INCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEK------HLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQ-EEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLK-------KEINSRDFSAN--------EKVIELSQTVKNNEIVIYELLNEKKQLETKLE------DLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENREL---KAELNHANVYYKRQTDDLNENL-------ERKINEL-NFQNEFCIEWKDKCEKL---EKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSY---RTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPES 2354 ++++I Y+ + + +LN S L I ++ + N N L KS+ + L L + D+ E + S K+ L +++ + T I D + +Q+++ + ++ + + + + E E F F K NNL++ EI N N+ + I K+F EQ +L + + + VE +N LE++ S + +E +S+L +++ + N+ L +LQD K D+ QL +++ +AN EK E+ + + NN + N+ ++ L ++ S E E + + + + +++++ EL ELN+++ K + D + +L E+ + +L + QN+ + D + + ++++ N+ + P++ ++E + + +S A+S + + + + L L L +K L N+ +I +S Sbjct: 2156 DLDRISHFYESVANQLTSLNASTFAWTQLNRLNASIADIANAITNYNSTLDKSRNRASVLEGELEIIDSDIKDLEKKASVTQKKKDALEDNINSTHTRAQELFGFIKGIMRDVKDIIQQVNRTAQNETQVMDEKDLARKIAEVESMLRDMRFRGFDYQKNKAKNELDQANNLVDRVINEIANRTWNNEAVAENIRNKLKQFNEQLMDLRDAMNEAVNNTAQTVEANNINQKHLEDLQKKVNSLHEKYKEVVSQLQMAEDDVTQVNDLLSMLQDSKEDYEHLAAQLDGARQPLAEKVQKYAPAANKIPLVEAAEKHAEMLEQLANNLSSLISGSNQDNFIQRALNASRAYTNIINSVLEAETTALKANETASMALENIRDKDLPAQAAALKNQSTELLKSAEELNNSSQSLKPRVDTIKMSLLDAEKKKEKMLQDLKDIQNKLNVSRDDIVNSISAAKSAVEQANNTVANVSGVLAPIQKQLEEWQKQYGDSNATSEDINKALNDANTSVAALSDTLPKLIKKLDRLHNTTFQPSNISDS 2694
BLAST of SMED30020811 vs. Ensembl Xenopus
Match: wdcp (WD repeat and coiled coil containing [Source:Xenbase;Acc:XB-GENE-5729803]) HSP 1 Score: 57.7658 bits (138), Expect = 1.222e-7 Identity = 97/493 (19.68%), Postives = 210/493 (42.60%), Query Frame = 3 Query: 528 ETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQ-QEKLNFVQCEKDDA---IRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAK--VSKDLSSKESQTSQ----------VSKENRRLS-----------------EDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLEN--DKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSK 1889 ETL NKT+ + ++ +L++ + N ++ A +E + A L + ++F + HK DL ++ +EKL + + DD +R + ++L + K ++ + K + E E + + + TE +NN Q ++++++ K+L L QL E+ +NLT +A+ + + + E+Q +Q + E + LS +D E+ E AK + + L + ++ K +H +N E ++ ++ EN + N+ N+L++ + L I + L +I+ K + + N +ERLK + + + L E++ + E ++ ++ ++ +E + L+ +++ + + K I Q+K+ IN AN I++S + + I Y+ +K + T + ++K T + +++ SK Sbjct: 1641 ETLGIPNKTLDKSFQELQKDIDSMMAELRRKSLRNQKNTADDE--------LKAAEALLNRVKKLFLEA-HKKNEDLNNEVKEKLGLFEEKLDDVWDLLREARGKIKAADDLSTVNQKNMTELEQGVEKGKKETESVLGDGDSIMTE---VNNLAQIINEDLSDMNKELPPLTEQLN---EKINNLTQEIARRDLPEQILQAENQAAQLIDSSAVLDGILAEAKNLSFNATVAFNAYSNIKDLIDDAEDTAKEAK-AKANEAIDLVRTKKSFTK----IHMQQNFIQARYNENDLAGIKNRLENADEKNQ----NMLQALNDTFGKLALIPNDTLVKIQTAKDKAKQANDTASDVLERLKDLNLNLLGLKQNYTALKEDVAKTNAAVKDPVENITDADGRVKQLEKEADRLLDKLKPIKELQENLGKNISQIKELINQARKQANS--IKVSVSSGGDCIRTYKPDIKKGRFNTIILNVKTDTQDNLLFYLGSK 2107
BLAST of SMED30020811 vs. Ensembl Xenopus
Match: wdcp (WD repeat and coiled coil containing [Source:Xenbase;Acc:XB-GENE-5729803]) HSP 1 Score: 57.3806 bits (137), Expect = 1.609e-7 Identity = 105/511 (20.55%), Postives = 214/511 (41.88%), Query Frame = 3 Query: 528 ETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNE------------EIERNLTQKNSE-NAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAK--VSKDLSSKESQTSQ----------VSKENRRLSED-------LENLKTEINCAK-TDNEVK----------------LQKMSENLMKKD-SMLHDLE---NDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSK 1889 ETL NKT+ + ++ +L++ + N ++ A +E ++ +KN + N E+K+K +F +KL L+ + K+ +N E+ RK + VEK KET E + + + TE NL + E +++++ K+L L QL E+ +NLT +A+ + + + E+Q +Q + E + LS + N+K I+ A+ T E K L+ ++N ++K +L D + D E ++ ++ EN + N+ N+L++ + L I + L +I+ K + + N +ERLK + + + L E++ + E ++ ++ ++ +E + L+ +++ + + K I Q+K+ IN AN I++S + + I Y+ +K + T + ++K T + +++ SK Sbjct: 1503 ETLGIPNKTLDKSFQELQKDIDSMMAELRRKSLRNQKNTADDELKAAEALLNRVKKLFLEAHKKNEDLNNEVKEKLGLFEEKLDDVWDLLREARGKIKAADDLSTVNQKNMTELERK-KQGVEKGKKET--------------ESVLGDGDSIMTEVNNLAQIINEAENDLSDMNKELPPLTEQLN---EKINNLTQEIARRDLPEQILQAENQAAQLIDSSAVLDGILAEAKNLSFNATVAFNAYSNIKDLIDDAEDTAKEAKAKANEAIDLVTGPQGSLKDEAKNAIQKSFRVLSDAKRHSGDVKDNENDLAGIKNRLENADEKNQ----NMLQALNDTFGKLALIPNDTLVKIQTAKDKAKQANDTASDVLERLKDLNLNLLGLKQNYTALKEDVAKTNAAVKDPVENITDADGRVKQLEKEADRLLDKLKPIKELQENLGKNISQIKELINQARKQANS--IKVSVSSGGDCIRTYKPDIKKGRFNTIILNVKTDTQDNLLFYLGSK 1989
BLAST of SMED30020811 vs. Ensembl Xenopus
Match: wdcp (WD repeat and coiled coil containing [Source:Xenbase;Acc:XB-GENE-5729803]) HSP 1 Score: 55.8398 bits (133), Expect = 4.960e-7 Identity = 99/495 (20.00%), Postives = 207/495 (41.82%), Query Frame = 3 Query: 528 ETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNE------------EIERNLTQKNSE-NAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETS----DHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDL--KNLNVQLTKSKEESHNLTLNLAKV------SKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDS---------MLHDLE---NDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSK 1889 ETL NKT+ + ++ +L++ + N ++ A +E ++ +KN + N E+K+K +F +KL L+ + K+ +N E+ RK + VEK KET D + + N + I + M E L L K I NL +++ ++L Q+ +++ ++ L + A + +K+LS + + L +D E+ E AK + + L + +K ++ +L D + D E ++ ++ EN + N+ N+L++ + L I + L +I+ K + + N +ERLK + + + L E++ + E ++ ++ ++ +E + L+ +++ + + K I Q+K+ IN AN I++S + + I Y+ +K + T + ++K T + +++ SK Sbjct: 1687 ETLGIPNKTLDKSFQELQKDIDSMMAELRRKSLRNQKNTADDELKAAEALLNRVKKLFLEAHKKNEDLNNEVKEKLGLFEEKLDDVWDLLREARGKIKAADDLSTVNQKNMTELERK-KQGVEKGKKETESVLGDGDSIMTEVNNLAQIINEDLSDMNKELPPLTEQLNEK---INNLTQEIARRDLPEQILQAENQAAQLIDSSAVLDGILAEAKNLSFNATVAFNAYSNIKDLIDDAEDTAKEAK-AKANEAIDLVTGPQGSLKDEAKNAIQKSFRVLSDAKRHSGDVKDNENDLAGIKNRLENADEKNQ----NMLQALNDTFGKLALIPNDTLVKIQTAKDKAKQANDTASDVLERLKDLNLNLLGLKQNYTALKEDVAKTNAAVKDPVENITDADGRVKQLEKEADRLLDKLKPIKELQENLGKNISQIKELINQARKQANS--IKVSVSSGGDCIRTYKPDIKKGRFNTIILNVKTDTQDNLLFYLGSK 2170
BLAST of SMED30020811 vs. Ensembl Xenopus
Match: wdcp (WD repeat and coiled coil containing [Source:Xenbase;Acc:XB-GENE-5729803]) HSP 1 Score: 53.5286 bits (127), Expect = 2.700e-6 Identity = 101/497 (20.32%), Postives = 208/497 (41.85%), Query Frame = 3 Query: 528 ETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNE------------EIERNLTQKNSE-NAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHV---EMYRKYENEIEKIRSEYKQMKTE--TVNLNNSLQAKEKEITNLKKDL-------KNLNVQLTKSK-------EESHNLTLNLAKVS-------KDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSK 1889 ETL NKT+ + ++ +L++ + N ++ A +E ++ +KN + N E+K+K +F +KL L+ + K+ +N E+ K + VEK KET + + N + +I +E + +K T LN + +EI ++DL +N QL S E+ NL+ N A V+ KDL T++ +K + +E ++ + K + + +QK L D++++ E ++ ++ EN + N+ N+L++ + L I + L +I+ K + + N +ERLK + + + L E++ + E ++ ++ ++ +E + L+ +++ + + K I Q+K+ IN AN I++S + + I Y+ +K + T + ++K T + +++ SK Sbjct: 1672 ETLGIPNKTLDKSFQELQKDIDSMMAELRRKSLRNQKNTADDELKAAEALLNRVKKLFLEAHKKNEDLNNEVKEKLGLFEEKLDDVWDLLREARGKIKAADDLSTVNQKNMTELEVKKKQGVEKGKKETESVLGDGDSIMTEVNNLAQIINEAENVKLPPLTEQLNEKINNLTQEIA--RRDLPEQILQAENQAAQLIDSSAVLDGILAEAKNLSFN-ATVAFNAYSNIKDLIDDAEDTAKEAKA--KANEAIDLVTGPQGSLKDEAKNAIQKSFRVLSDAKRHSGDVKDN----ENDLAGIKNRLENADEKNQ----NMLQALNDTFGKLALIPNDTLVKIQTAKDKAKQANDTASDVLERLKDLNLNLLGLKQNYTALKEDVAKTNAAVKDPVENITDADGRVKQLEKEADRLLDKLKPIKELQENLGKNISQIKELINQARKQANS--IKVSVSSGGDCIRTYKPDIKKGRFNTIILNVKTDTQDNLLFYLGSK 2153
BLAST of SMED30020811 vs. Ensembl Xenopus
Match: wdcp (WD repeat and coiled coil containing [Source:Xenbase;Acc:XB-GENE-5729803]) HSP 1 Score: 52.7582 bits (125), Expect = 4.858e-6 Identity = 91/467 (19.49%), Postives = 195/467 (41.76%), Query Frame = 3 Query: 528 ETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQ-QEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKV------SKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLEN--DKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSK 1889 ETL NKT+ + ++ +L++ + N ++ A +E + A L + ++F + HK DL ++ +EKL + + DD E K K D + +K E+E + K++ T LN + +EI ++L Q+ +++ ++ L + A + +K+LS + + L +D E+ E AK + + L + ++ K +H +N E ++ ++ EN + N+ N+L++ + L I + L +I+ K + + N +ERLK + + + L E++ + E ++ ++ ++ +E + L+ +++ + + K I Q+K+ IN AN I++S + + I Y+ +K + T + ++K T + +++ SK Sbjct: 1597 ETLGIPNKTLDKSFQELQKDIDSMMAELRRKSLRNQKNTADDE--------LKAAEALLNRVKKLFLEA-HKKNEDLNNEVKEKLGLFEEKLDDVWDLLREARGKI--------KAADDLSTVNQKNMTELEDLSDMNKELPPLTEQLNEKINNLTQEIAR-----RDLPEQILQAENQAAQLIDSSAVLDGILAEAKNLSFNATVAFNAYSNIKDLIDDAEDTAKEAK-AKANEAIDLVRTKKSFTK----IHMQQNFIQARYNENDLAGIKNRLENADEKNQ----NMLQALNDTFGKLALIPNDTLVKIQTAKDKAKQANDTASDVLERLKDLNLNLLGLKQNYTALKEDVAKTNAAVKDPVENITDADGRVKQLEKEADRLLDKLKPIKELQENLGKNISQIKELINQARKQANS--IKVSVSSGGDCIRTYKPDIKKGRFNTIILNVKTDTQDNLLFYLGSK 2030
BLAST of SMED30020811 vs. Ensembl Mouse
Match: Lama2 (laminin, alpha 2 [Source:MGI Symbol;Acc:MGI:99912]) HSP 1 Score: 53.1434 bits (126), Expect = 2.891e-6 Identity = 111/513 (21.64%), Postives = 217/513 (42.30%), Query Frame = 3 Query: 423 EYLKTEIKKFES--EKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQ--------LKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVK-RLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS------------RDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGE-KEVYFQNSK 1889 E++K ++ E+ EK E Q+K A+ R E E ++ +K +K +T+ + E LK++ E A+NE++E++L QK AE K K + + L + D +L+ + + ++E +E + KE +D ++ + EI + +KT+ ++ L K I +L +++K+ + + ESH LN + D E++ +S N+K I+ A+ K+ + ++ L + + L + + LL+++ K L+K +FR +NE +K++ N VK N L+ ++ + +N+ LL + N+ L IT + +KL + E+ +E N+ + + Q D + +D LK+ N +D S N+ + + +V+N E L+++ K ++ ++LKK+ E KE+ Q K Sbjct: 1676 EFIKGLVQDAEAINEKAVQLNETLGNQDKTAE-RNLEELQKEIDRMLKELRSKDLQTQKEVAEDELVAAEGLLKRVNKLFGEPRAQNEDMEKDLQQKL---AEYKNKLDD-AWDLLREATDKTRDANRLSAANQKNMTILETKKEAIEGSKRQIENTLKEGNDILDEANRLLGEINSVIDYVDDIKTKLPPMSEELSDK---IDDLAQEIKDRRLAEKVFQAESHAAQLNDSSAVLDGILDEAK--NISFNATAAFRAYSNIKDYIDEAE-----KVAREAKELAQGATKL--ATSPQGLLKEDAKGSLQK---SFRILNE----------AKKLANDVKGNHNDLNDLKTRLETADLRNSGLLGAL--------------NDTMDKLSAIT---------NDTAAKLQAVKEKAREANDTAKAVLAQVKDLHQNLDGLKQNYNKLADSVAKTNAVVKDPSKNKIIADAGTSVRNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARK 2135
BLAST of SMED30020811 vs. UniProt/SwissProt
Match: sp|P24043|LAMA2_HUMAN (Laminin subunit alpha-2 OS=Homo sapiens OX=9606 GN=LAMA2 PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 7.355e-10 Identity = 107/502 (21.31%), Postives = 221/502 (44.02%), Query Frame = 3 Query: 423 EYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINS------------RDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGE-KEVYFQNSK 1889 E L T + FE + L E+++ +++ + +T+ E++ + + + LKK++ ES +NEE+E++L +K A+ K K + + L + D + +L V + A+ ++E +E + KE +D ++ + +EI I + ++T+ ++ L K I +L +++K+ + S+ ESH LN + D E++ +S + N+K I+ A+ K+ K +++L + + L + LL+++ K ++ +FR +NE +K++ N VK N++ L+ ++ + +N +LLR + N+ G L I + +KL + ++ ++ N+ + + Q + + +D LKK N +D S N+ + + TVKN E L+++ K ++ ++LKK+ E KE+ Q K Sbjct: 1701 ETLGTRDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAEDELVAA------------EALLKKVKKLFGESRGENEEMEKDLREKL---ADYKNKVDD-AWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLPPMSEELNDK---IDDLSQEIKDRKLAEKVSQAESHAAQLNDSSAVLDGILDEAK--NISFNATAAFKAYSNIKDYIDEAE-----KVAKEAKDLAHEATKL--ATGPRGLLKEDAKGCLQK--SFRILNE----------AKKLANDVKENEDHLNGLKTRIENADARNGDLLRTL--------------NDTLGKLSAIP---------NDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNKIIADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELINQARK 2139
BLAST of SMED30020811 vs. UniProt/SwissProt
Match: sp|Q90631|KTN1_CHICK (Kinectin OS=Gallus gallus OX=9031 GN=KTN1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 8.156e-6 Identity = 31/109 (28.44%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 2727 HESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELR 3053 H ++ +A+E+ LR ++ +E I ++E++LK+ +E + L+++ + Y+ L +TE LQ +Q SV++EE+ WKI ++ S++E +++ + L +++E L+ Sbjct: 1097 HSEWICGFEKMAKEY--LRGAS----GSEDIKVMEQKLKEAEELHILLQLECEKYKSVLAETEGILQRLQRSVEEEESKWKIKVEESQKELKQMRSSVASLEHEVERLK 1199
BLAST of SMED30020811 vs. Ensembl Cavefish
Match: lama5 (laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]) HSP 1 Score: 58.5362 bits (140), Expect = 4.905e-8 Identity = 95/491 (19.35%), Postives = 201/491 (40.94%), Query Frame = 3 Query: 381 TIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTD---EQLKKLEIS-NSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEI----EKIRSEYKQMKTETVNLNNSLQAKEKEITNL----KKDLKNLN---VQLTKSKEESHNLTLNLAKVSKDLSSK------ESQTSQVSKENRRLSEDLENLKTEINCAKTD-NEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKE-FENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLH----EISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTV 1772 +I + +N S ++ + + E E QT+ +L E QEK + TL EN TI +K ER ++ D +K +E + N EE++R L + + ++ +F + + +++ +L + L+ V+ E D E + + K +E + + + N EK + KQ+ +N+ L+ K+KE+T+ + D+ +N L SKEE L L + L+ K S + +E + +E L+ L ++ +D N+ + + N + + + + N+ L KE + E E +N L L+ ++N +L+ ++ + EI+ K S + ++ + +L+ + +K +E+ + EI++ L E N + + D+ + +++L + + + S E ++ + + + Sbjct: 2198 SIENKSINNYNSSLDGSRDKANTLEKELQTIDSDLFELQEKASLSSRKGATL--ENNTIATK----ERAQNLLDTVKNYMKDIEAAQNGSQTMDEEELKRKLAEVAAMLRDM--RFRSTTPQGKQADYELSQANQLLDRVKSEMADRTAANEATVEEIKNKLNKFHQELTSLRDALNEAANNTALASEKNNANQKQLDENQQKVND-LKKKQKEVTDTMQMAEDDVAQVNDMLAMLQDSKEEYERLAAQLDGARQPLAEKVQNFSTSGAKSPLVEEAEKHAELLDQLAKNLSSVISDTNQDGFIQRALNASRAYNNIINSVNEADNLAKEANKSATEALEPKCVLNWTELKPQLQDIKNRLQNATTKKSDLMMDLQKVQNYLNTSQGNTSGEIQAAK---SAAEKANSTAADVLDTLDPIKKKLDEWQEQYGSSNMTNDEINKALSEANKSVGAIDDKIRTLMVKLNKLSTSVPTNNIS--ESILRIRELI 2674
BLAST of SMED30020811 vs. Ensembl Cavefish
Match: rrbp1b (ribosome-binding protein 1 [Source:NCBI gene;Acc:103030923]) HSP 1 Score: 53.9138 bits (128), Expect = 1.209e-6 Identity = 32/90 (35.56%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 2799 QDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHS 3068 Q N E L+ +L+K +E L+ Q D YR TL +TE L+++Q SV++ E WK + +E++ + K+KEL +E LR++ S Sbjct: 977 QQNTELTDSLQ-KLRKAEESQNTLQAQCDQYRATLSQTEGVLKDLQCSVEEGERAWKAKISEAEEQHQTAVSKLKELEVTVETLRAENQS 1065
BLAST of SMED30020811 vs. Ensembl Cavefish
Match: rrbp1b (ribosome-binding protein 1 [Source:NCBI gene;Acc:103030923]) HSP 1 Score: 53.9138 bits (128), Expect = 1.217e-6 Identity = 32/90 (35.56%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 2799 QDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHS 3068 Q N E L+ +L+K +E L+ Q D YR TL +TE L+++Q SV++ E WK + +E++ + K+KEL +E LR++ S Sbjct: 946 QQNTELTDSLQ-KLRKAEESQNTLQAQCDQYRATLSQTEGVLKDLQCSVEEGERAWKAKISEAEEQHQTAVSKLKELEVTVETLRAENQS 1034
BLAST of SMED30020811 vs. Ensembl Cavefish
Match: rrbp1b (ribosome-binding protein 1 [Source:NCBI gene;Acc:103030923]) HSP 1 Score: 53.5286 bits (127), Expect = 1.287e-6 Identity = 32/90 (35.56%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 2799 QDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHS 3068 Q N E L+ +L+K +E L+ Q D YR TL +TE L+++Q SV++ E WK + +E++ + K+KEL +E LR++ S Sbjct: 977 QQNTELTDSLQ-KLRKAEESQNTLQAQCDQYRATLSQTEGVLKDLQCSVEEGERAWKAKISEAEEQHQTAVSKLKELEVTVETLRAENQS 1065
BLAST of SMED30020811 vs. Planmine SMEST
Match: SMESG000005612.1 (SMESG000005612.1) HSP 1 Score: 1833.92 bits (4749), Expect = 0.000e+0 Identity = 1002/1039 (96.44%), Postives = 1008/1039 (97.02%), Query Frame = 3 Query: 78 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEASVSQPXXXXXXXXXXXGEIKATHDEVSESVNEVQADENLNPETFITPVISVSQENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCEKLEKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIDVETISDNKADQSHSASNFLNSIEKLNIEIFEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQXXXXXXXXXXNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETXXXXXXXXXXXXXXXXVTQQ 3194 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGE SVSQPKKSKKQKKLHKGE K THDEVSESVNEVQADENLNPETFITPVISVS ENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKY+NEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNL KVSKDLSSKESQ VS ENRRLSE +ENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFR+INEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT KQLETKLEDLKKS GEKEVYFQNSKPMVEFEELFKKLEKKNEEL+RVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCE LEKTLQESLNSNRQ LEMTVP+ESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTI+ ETISDNKADQSHSASN LNSIEKLNIEI EQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ Sbjct: 1 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEPSVSQPKKSKKQKKLHKGESKVTHDEVSESVNEVQADENLNPETFITPVISVSHENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYDNEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLEKVSKDLSSKESQ---VSNENRRLSEYIENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFREINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT---------------KQLETKLEDLKKSNGEKEVYFQNSKPMVEFEELFKKLEKKNEELVRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCENLEKTLQESLNSNRQHLEMTVPIESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIEAETISDNKADQSHSASNLLNSIEKLNIEISEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ 1021
BLAST of SMED30020811 vs. Planmine SMEST
Match: SMESG000005612.1 (SMESG000005612.1) HSP 1 Score: 1771.52 bits (4587), Expect = 0.000e+0 Identity = 979/1039 (94.23%), Postives = 985/1039 (94.80%), Query Frame = 3 Query: 78 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEASVSQPXXXXXXXXXXXGEIKATHDEVSESVNEVQADENLNPETFITPVISVSQENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCEKLEKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIDVETISDNKADQSHSASNFLNSIEKLNIEIFEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQXXXXXXXXXXNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETXXXXXXXXXXXXXXXXVTQQ 3194 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGE SVSQPKKSKKQKKLHKGE K THDEVSESVNEVQADENLNPETFITPVISVS ENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKY+NEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNL KVSKDLSSKE SQVS ENRRLSE +ENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFR+INEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT KQLETKLEDLKKS GEKEVYFQNSKPMVEFEELFKKLEKKNEEL+RVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCE LEKTLQESLNSNRQ LEMTVP+ESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTI+ ETISDNKADQSHSASN LNSIEKLNIEI EQRLKNQTLGKQLIDKNIE DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ Sbjct: 1 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEPSVSQPKKSKKQKKLHKGESKVTHDEVSESVNEVQADENLNPETFITPVISVSHENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYDNEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLEKVSKDLSSKE---SQVSNENRRLSEYIENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFREINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT---------------KQLETKLEDLKKSNGEKEVYFQNSKPMVEFEELFKKLEKKNEELVRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCENLEKTLQESLNSNRQHLEMTVPIESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIEAETISDNKADQSHSASNLLNSIEKLNIEISEQRLKNQTLGKQLIDKNIE-----------------------DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ 998
BLAST of SMED30020811 vs. Planmine SMEST
Match: SMESG000005612.1 (SMESG000005612.1) HSP 1 Score: 1743.4 bits (4514), Expect = 0.000e+0 Identity = 967/1039 (93.07%), Postives = 973/1039 (93.65%), Query Frame = 3 Query: 78 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEASVSQPXXXXXXXXXXXGEIKATHDEVSESVNEVQADENLNPETFITPVISVSQENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCEKLEKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIDVETISDNKADQSHSASNFLNSIEKLNIEIFEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQXXXXXXXXXXNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETXXXXXXXXXXXXXXXXVTQQ 3194 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGE SVSQPKKSKKQKKLHKGE K THDEVSESVNEVQADENLNPETFITPVISVS ENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKY+NEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNL KVSKDLSSKE SQVS ENRRLSE +ENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFR+INEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT KQLETKLEDLKKS GEKEVYFQNSKPMVEFEELFKKLEKKNEEL+RVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCE LEKTLQESLNSNRQ LEMTVP+ESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTI+ ETISDNKADQSHSASN LNSIEKLNIEI EQRLKNQ DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ Sbjct: 1 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEPSVSQPKKSKKQKKLHKGESKVTHDEVSESVNEVQADENLNPETFITPVISVSHENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYDNEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLEKVSKDLSSKE---SQVSNENRRLSEYIENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFREINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT---------------KQLETKLEDLKKSNGEKEVYFQNSKPMVEFEELFKKLEKKNEELVRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCENLEKTLQESLNSNRQHLEMTVPIESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIEAETISDNKADQSHSASNLLNSIEKLNIEISEQRLKNQ-----------------------------------DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTMISMETPPIANGSLSSETKKKRKRKNKKKKNKNRVTQQ 986
BLAST of SMED30020811 vs. Planmine SMEST
Match: SMESG000005612.1 (SMESG000005612.1) HSP 1 Score: 1702.95 bits (4409), Expect = 0.000e+0 Identity = 930/1002 (92.81%), Postives = 936/1002 (93.41%), Query Frame = 3 Query: 78 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEASVSQPXXXXXXXXXXXGEIKATHDEVSESVNEVQADENLNPETFITPVISVSQENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYENEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLAKVSKDLSSKESQTSQVSKENRRLSEDLENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFRQINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCEKLEKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIDVETISDNKADQSHSASNFLNSIEKLNIEIFEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQXXXXXXXXXXNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTM 3083 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGE SVSQPKKSKKQKKLHKGE K THDEVSESVNEVQADENLNPETFITPVISVS ENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKY+NEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNL KVSKDLSSKE SQVS ENRRLSE +ENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFR+INEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT KQLETKLEDLKKS GEKEVYFQNSKPMVEFEELFKKLEKKNEEL+RVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCE LEKTLQESLNSNRQ LEMTVP+ESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTI+ ETISDNKADQSHSASN LNSIEKLNIEI EQRLKNQ DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTM Sbjct: 1 MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEPSVSQPKKSKKQKKLHKGESKVTHDEVSESVNEVQADENLNPETFITPVISVSHENTIPDDILNKNLSEIEYLKTEIKKFESEKQTLSCELEEAQEKIAKYREDTETLTEENKTIKSKLTKFERTKSKTDEQLKKLEISNSESIAKNEEIERNLTQKNSENAELKQKFEIFSQKLHKSEMDLKSQQEKLNFVQCEKDDAIRNREEITRKYNELVEKSSKETSDHVEMYRKYDNEIEKIRSEYKQMKTETVNLNNSLQAKEKEITNLKKDLKNLNVQLTKSKEESHNLTLNLEKVSKDLSSKE---SQVSNENRRLSEYIENLKTEINCAKTDNEVKLQKMSENLMKKDSMLHDLENDKSLLEKEVKRLRKEFENFREINEKHLNNLLESKSKEIENLVKINQELLSQIELTKKEFTEQNTELLREIERLKQDYSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLSKLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQT---------------KQLETKLEDLKKSNGEKEVYFQNSKPMVEFEELFKKLEKKNEELVRVQHENRELKAELNHANVYYKRQTDDLNENLERKINELNFQNEFCIEWKDKCENLEKTLQESLNSNRQHLEMTVPIESIIQEIRVEPTESFASSYRTTEEMQSHIVKLESELLALQRKYYDLKNSAITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIEAETISDNKADQSHSASNLLNSIEKLNIEISEQRLKNQ-----------------------------------DLQKSFSESSSEKNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEELRSKQHSDSPTM 949
BLAST of SMED30020811 vs. Planmine SMEST
Match: SMESG000005613.1 (SMESG000005613.1) HSP 1 Score: 83.5741 bits (205), Expect = 5.785e-16 Identity = 157/574 (27.35%), Postives = 271/574 (47.21%), Query Frame = 3 Query: 1473 ELLREIERLKQD-YSVKVEVSNEKSGLLEEITLLKTSCSSQEEKLS-----KLHEISEELKEKNNDLRVLQDQKMDFLKAIDQLKKEINSRDFSANEKVIELSQTVKNNEIVIYELLNEKKQLETKLEDLKKSTGEKEVYFQNSKPMVXXXXXXXXXXXXXXXXXRVQHENRELK--------AELNHANVYYKRQTDDLN----ENLERKINELNFQNEFCIEWKDKCEKLEKTLQESLNSNRQQLEMTVPVESIIQEIRVEPTESFASSYR-----------TTE---EMQSHIVKLE---------SELLALQRKYYDLKNSA--ITSDDIPESHSKSPANVNIYQSDIISIPPTDMTIDVETISDNKADQSHSASNFLNSIEKLNIEIFEQRLKNQTLGKQLIDKNIEVNALKQCLYGLDGDLLSIEHLALDLQXXXXXXXXXXNKLKADYNQLIKEHESVKAKYDSLAEEFYVLRNSTEIQDNNETIGILEEQLKKCQEENFHLKVQLDHYRETLEKTENCLQNIQASVDQEENNWKICLKSSEQEQERLEEKIKELLNQIEEL-RSKQ 3062 ELL+EI++L+ + +V +++ LL+E K + + EK + L+EI +EL+ KN ++ VLQD K + IDQLK+E+ ++D K+ E KN+EI+ EL +K +L +E L K E +Y ++ + L + ++K E+ R ++E LK +EL+ V + D + E E E +F N+ +E + + KTL + + ++L + +E + E+R E E + S+ TTE E++ I+K E ELL LQ KY++LK S D++ SH +P++V + S + S S+ + + S S FL+SIEKLN+EI EQR KNQ L +++Q L K+ L+ ++QL+++ + + +KY+ + E + I +++ L E+L K +EEN L +L+ +E L++++ +NI+ +E +W LK +++ E+KIKELLNQ+ L R++Q Sbjct: 325 ELLKEIQQLRNEKLESEVTTTDQTEILLKEFMPPKQTSTVVHEKATDVSDGTLNEIFQELEGKNREISVLQDHKSSLIHEIDQLKRELLNKDSEVEMKLKE-----KNSEII--ELERQKIELGLNVEYLTKEMSECVIYRKDGDANEKLVTLLENIDKLRREMHR-KYEKFTLKLKEKETIISELHSIQVSLESNIDQMTRRVKETTEISDQESDFGNKL-VELHKEIDT--KTL-DIITLRNEKLALLTDIERLQDELR-ESRELYVDSFEQMTRTVVLKDFTTEDEIEIKEQIIKPEIAPQSMAFSRELLELQSKYFNLKISLQEKIDDNVLVSHELTPSSVETFASHLKSFCD----------SNEISSKLSSTSKFLDSIEKLNVEIAEQRNKNQELR----------TSIQQSLLS-------------------------KSPLQGTFHQLLQDQDIINSKYEEIWE-----ASKCTISEHDYENSRLREELTKFKEENEKLSNRLNISQEVLKQSDIHFENIKECYLKENESWDRRLKILQEQGIINEDKIKELLNQLSVLERNRQ 835 The following BLAST results are available for this feature:
BLAST of SMED30020811 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of SMED30020811 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of SMED30020811 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30020811 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of SMED30020811 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30020811 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of SMED30020811 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 2
BLAST of SMED30020811 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30020811 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of SMED30020811 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30020811 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30020811 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30020811 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30020811 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020811 ID=SMED30020811|Name=SMED30020811|organism=Schmidtea mediterranea sexual|type=transcript|length=3284bpback to top protein sequence of SMED30020811-orf-1 >SMED30020811-orf-1 ID=SMED30020811-orf-1|Name=SMED30020811-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1040bp MLFILSIILTFIVILLSAYFIYFYLKPKKEPVTSSKHPVTKPQGEASVSQback to top Annotated Terms
The following terms have been associated with this transcript:
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