Succinyl-CoA:3-ketoacid-coenzyme A transferase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020710 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Human
Match: OXCT1 (3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]) HSP 1 Score: 81.2629 bits (199), Expect = 1.928e-18 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ E++KDIP+G+T+LVGG FG+CGIPENLI L ++ +K LT VSNNAG+ ++GL +L +Q+K + Y +N Sbjct: 43 YTDPVEAVKDIPDGATVLVGG-------FGLCGIPENLIDALLKTGVKGLTAVSNNAGVDNFGLGLLLRSKQIKRMVSSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Human
Match: OXCT2 (3-oxoacid CoA-transferase 2 [Source:HGNC Symbol;Acc:HGNC:18606]) HSP 1 Score: 79.7221 bits (195), Expect = 7.085e-18 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNNI 360 Y + E +KDI +G+T+++GG FG+CGIPENLI L ++++KDL +VS+N G+ D+GL +L RQV+ + Y +N + Sbjct: 43 YADPVEMVKDISDGATVMIGG-------FGLCGIPENLIAALLRTRVKDLQVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTL 121
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Celegans
Match: C05C10.3 (Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09450]) HSP 1 Score: 85.5001 bits (210), Expect = 2.338e-20 Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 73 VSVVNSFKP-VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 +S+ +S K V+ +AEE++KDIP+ + LLVGG FG+CGIPENLI + ++ K LT VSNNAG+ +WGL +L + RQ+K + Y +N Sbjct: 29 ISMTSSMKAKVFNSAEEAVKDIPDNAKLLVGG-------FGLCGIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGEN 116
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Fly
Match: SCOT (gene:FBgn0035298 transcript:FBtr0072844) HSP 1 Score: 65.0846 bits (157), Expect = 3.924e-13 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 100 VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNN 357 +Y +A +++ D+ +G+ +L GG FGICGIPE +I L Q +K++T VSNN G+ D GL +L + +QV + Y +N Sbjct: 36 IYESAIDAVADVQDGAQILFGG-------FGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYVGENT 114
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Fly
Match: SCOT (gene:FBgn0035298 transcript:FBtr0072843) HSP 1 Score: 64.6994 bits (156), Expect = 4.742e-13 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 100 VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNN 357 +Y +A +++ D+ +G+ +L GG FGICGIPE +I L Q +K++T VSNN G+ D GL +L + +QV + Y +N Sbjct: 22 IYESAIDAVADVQDGAQILFGG-------FGICGIPEKMINALKQKGVKNITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYVGENT 100
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Zebrafish
Match: oxct1b (3-oxoacid CoA transferase 1b [Source:ZFIN;Acc:ZDB-GENE-060929-212]) HSP 1 Score: 82.4185 bits (202), Expect = 4.608e-19 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E+++DIPNGS LLVGG FG+CGIPENLI L ++ +KD+T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 51 YSDPVETVQDIPNGSKLLVGG-------FGLCGIPENLISSLLKTGVKDITAVSNNAGVDNFGLGMLLKSKQIKRMISSYVGEN 127
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Zebrafish
Match: oxct1a (3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]) HSP 1 Score: 82.0333 bits (201), Expect = 5.989e-19 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ +++KDIPNG+T+LVGG FG+CGIPENLI L ++ +K LT VSNNAG+ D+GL +L +Q+K + Y +N Sbjct: 50 YSDPLDAVKDIPNGATVLVGG-------FGLCGIPENLINSLLKTGVKSLTAVSNNAGVDDFGLGLLLRTKQIKRMISSYVGEN 126
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Zebrafish
Match: oxct1a (3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]) HSP 1 Score: 80.8777 bits (198), Expect = 1.813e-18 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ +++KDIPNG+T+LVGG FG+CGIPENLI L ++ +K LT VSNNAG+ D+GL +L +Q+K + Y +N Sbjct: 50 YSDPLDAVKDIPNGATVLVGG-------FGLCGIPENLINSLLKTGVKSLTAVSNNAGVDDFGLGLLLRTKQIKRMISSYVGEN 126
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Match: mettl18 (methyltransferase like 18 [Source:Xenbase;Acc:XB-GENE-5811219]) HSP 1 Score: 84.7297 bits (208), Expect = 8.897e-20 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 53 YSDPVEAVKDIPDGSTLLVGG-------FGLCGIPENLIAGLLKTGVKGITAVSNNAGVDNFGLGLLLQTKQIKRMVSSYVGEN 129
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Match: mettl18 (methyltransferase like 18 [Source:Xenbase;Acc:XB-GENE-5811219]) HSP 1 Score: 84.7297 bits (208), Expect = 9.043e-20 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 38 YSDPVEAVKDIPDGSTLLVGG-------FGLCGIPENLIAGLLKTGVKGITAVSNNAGVDNFGLGLLLQTKQIKRMVSSYVGEN 114
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Match: mettl18 (methyltransferase like 18 [Source:Xenbase;Acc:XB-GENE-5811219]) HSP 1 Score: 84.7297 bits (208), Expect = 9.225e-20 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 53 YSDPVEAVKDIPDGSTLLVGG-------FGLCGIPENLIAGLLKTGVKGITAVSNNAGVDNFGLGLLLQTKQIKRMVSSYVGEN 129
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Match: mettl18 (methyltransferase like 18 [Source:Xenbase;Acc:XB-GENE-5811219]) HSP 1 Score: 83.1889 bits (204), Expect = 3.555e-19 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 32 YSDPVEAVKDIPDGSTLLVGG-------FGLCGIPENLIAGLLKTGVKGITAVSNNAGVDNFGLGLLLQTKQIKRMVSSYVGEN 108
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Match: mettl18 (methyltransferase like 18 [Source:Xenbase;Acc:XB-GENE-5811219]) HSP 1 Score: 83.1889 bits (204), Expect = 3.565e-19 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 35 YSDPVEAVKDIPDGSTLLVGG-------FGLCGIPENLIAGLLKTGVKGITAVSNNAGVDNFGLGLLLQTKQIKRMVSSYVGEN 111
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Mouse
Match: Oxct1 (3-oxoacid CoA transferase 1 [Source:MGI Symbol;Acc:MGI:1914291]) HSP 1 Score: 88.5817 bits (218), Expect = 2.670e-21 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ E++KDIPNG+TLLVGG FG+CGIPENLIG L ++ +KDLT VSNNAG+ ++GL +L +Q+K + Y +N Sbjct: 43 YTDPVEAVKDIPNGATLLVGG-------FGLCGIPENLIGALLKTGVKDLTAVSNNAGVDNFGLGLLLRSKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Mouse
Match: Oxct1 (3-oxoacid CoA transferase 1 [Source:MGI Symbol;Acc:MGI:1914291]) HSP 1 Score: 88.5817 bits (218), Expect = 3.224e-21 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ E++KDIPNG+TLLVGG FG+CGIPENLIG L ++ +KDLT VSNNAG+ ++GL +L +Q+K + Y +N Sbjct: 43 YTDPVEAVKDIPNGATLLVGG-------FGLCGIPENLIGALLKTGVKDLTAVSNNAGVDNFGLGLLLRSKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Mouse
Match: Oxct2b (3-oxoacid CoA transferase 2B [Source:MGI Symbol;Acc:MGI:2664115]) HSP 1 Score: 73.9442 bits (180), Expect = 5.115e-16 Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ ++++ + +GST+++GG FG+CGIPENLIG L +KDL IVS+N G+ D+GL IL +QV+ + Y +N Sbjct: 43 YTDPVKAVEGVKDGSTVMLGG-------FGLCGIPENLIGALKTKGVKDLKIVSSNVGVDDFGLGILLASKQVRRVVCSYLGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Mouse
Match: Oxct2a (3-oxoacid CoA transferase 2A [Source:MGI Symbol;Acc:MGI:1891061]) HSP 1 Score: 73.9442 bits (180), Expect = 5.115e-16 Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ ++++ + +GST+++GG FG+CGIPENLIG L +KDL IVS+N G+ D+GL IL +QV+ + Y +N Sbjct: 43 YTDPVKAVEGVKDGSTVMLGG-------FGLCGIPENLIGALKTKGVKDLKIVSSNVGVDDFGLGILLASKQVRRVVCSYLGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Match: sp|Q54JD9|SCOT_DICDI (Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=oxct1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.069e-22 Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 100 VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 +Y NA+E++KDIPNGS LLVGG FG+CGIPENLI + + +KDLT+VSNNAG+ D+GL +L + RQ+K + Y +N Sbjct: 28 IYENAKEAVKDIPNGSKLLVGG-------FGLCGIPENLISAVRDTGVKDLTVVSNNAGVDDFGLGVLLKSRQIKRMISSYVGEN 105
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Match: sp|B2GV06|SCOT1_RAT (Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.766e-20 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ E++KDIPNG+TLLVGG FG+CGIPENLIG L ++ +KDLT VSNNAG+ ++GL +L +Q+K + Y +N Sbjct: 43 YTDPVEAVKDIPNGATLLVGG-------FGLCGIPENLIGALLKTGVKDLTAVSNNAGVDNFGLGLLLRSKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Match: sp|Q29551|SCOT1_PIG (Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Sus scrofa OX=9823 GN=OXCT1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.966e-20 Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+A E++KDIPNG+T+LVGG FG+CGIPENLIG L ++ +K+LT VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 43 YTDAVEAVKDIPNGATVLVGG-------FGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Match: sp|Q9D0K2|SCOT1_MOUSE (Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.255e-20 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 YT+ E++KDIPNG+TLLVGG FG+CGIPENLIG L ++ +KDLT VSNNAG+ ++GL +L +Q+K + Y +N Sbjct: 43 YTDPVEAVKDIPNGATLLVGG-------FGLCGIPENLIGALLKTGVKDLTAVSNNAGVDNFGLGLLLRSKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Match: sp|Q09450|SCOT_CAEEL (Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=C05C10.3 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.974e-19 Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 73 VSVVNSFKP-VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 +S+ +S K V+ +AEE++KDIP+ + LLVGG FG+CGIPENLI + ++ K LT VSNNAG+ +WGL +L + RQ+K + Y +N Sbjct: 29 ISMTSSMKAKVFNSAEEAVKDIPDNAKLLVGG-------FGLCGIPENLIQAITKTGQKGLTCVSNNAGVDNWGLGLLLQTRQIKKMISSYVGEN 116
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Match: A0A2T7NR33 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_16904 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.370e-20 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 112 AEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 A+E+IKDIPNG+ LLVGG FG+CGIPENLIG L ++K+KDLT+VSNNAG+ D+GL +L + RQ+K + Y +N Sbjct: 162 AQEAIKDIPNGAKLLVGG-------FGLCGIPENLIGALLETKVKDLTVVSNNAGVDDFGLGMLLKQRQIKRMISSYVGEN 235
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Match: A0A2B4SF60 (Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Stylophora pistillata OX=50429 GN=OXCT1 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.296e-20 Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 64 KLSVSVVNSFKPVYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 K S S S Y NAEE++KDIP+G+ LLVGG FG+CGIPENLI GL ++ IKDLT VSNNAG+ D+GL +L + +QVK + Y +N Sbjct: 31 KFSTSSSRSLH-FYNNAEEAVKDIPHGAKLLVGG-------FGLCGIPENLIDGLLKTGIKDLTCVSNNAGVDDFGLGLLLKTKQVKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Match: A0A2V8VDS7 (Succinyl-CoA--3-ketoacid-CoA transferase OS=Acidobacteria bacterium OX=1978231 GN=DMF52_14435 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.076e-19 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 100 VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNNIMN 366 V +A+E+I+DIP+G+TL+VGG FG+CGIPENLI L + KDLT++SNNAG D+GL +L RQ++ + Y +N++ Sbjct: 4 VVRDADEAIRDIPDGATLMVGG-------FGLCGIPENLIKALQRKGTKDLTVMSNNAGTSDYGLGLLLRTRQIRKMISTYVGENDLFE 85
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Match: A0A1Q7RQ26 (Succinyl-CoA--3-ketoacid-CoA transferase OS=Acidobacteria bacterium 13_1_40CM_2_68_10 OX=1803445 GN=AUI52_05240 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.076e-19 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 100 VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNNIMN 366 V +A+E+I+DIP+G+TL+VGG FG+CGIPENLI L + KDLT++SNNAG D+GL +L RQ++ + Y +N++ Sbjct: 4 VVRDADEAIRDIPDGATLMVGG-------FGLCGIPENLIKALQRKGTKDLTVMSNNAGTSDYGLGLLLRTRQIRKMISTYVGENDLFE 85
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Match: A0A2G5UUV4 (Uncharacterized protein OS=Caenorhabditis nigoni OX=1611254 GN=Cni-C05C10.3 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.348e-19 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 22 LIPNGSTLKISIIRKLSVSVVNSFKP-VYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 L+P +T I + S S K +Y + EE++KDIPNG+ LLVGG FG+CGIPENLI L ++ LT VSNNAG+ WGL +L + RQ+K + Y +N Sbjct: 15 LLPRAATRHIRFL-----STTFSLKAKIYESPEEAVKDIPNGAKLLVGG-------FGLCGIPENLIQALTKTGQTGLTCVSNNAGVDKWGLGLLLQTRQIKKMISSYVGEN 114
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Cavefish
Match: oxct1a (succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial [Source:NCBI gene;Acc:103039388]) HSP 1 Score: 83.9593 bits (206), Expect = 9.820e-20 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y N+ +++KDIP+G+T+LVGG FG+CGIPENLI L ++ +K LT VSNNAG+ D+GL +L + +Q+K + Y +N Sbjct: 38 YPNSTDAVKDIPDGATILVGG-------FGLCGIPENLINSLLKTGVKSLTAVSNNAGVDDFGLGLLLKTKQIKRMISSYVGEN 114
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Cavefish
Match: oxct1a (succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial [Source:NCBI gene;Acc:103039388]) HSP 1 Score: 83.9593 bits (206), Expect = 1.132e-19 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y N+ +++KDIP+G+T+LVGG FG+CGIPENLI L ++ +K LT VSNNAG+ D+GL +L + +Q+K + Y +N Sbjct: 38 YPNSTDAVKDIPDGATILVGG-------FGLCGIPENLINSLLKTGVKSLTAVSNNAGVDDFGLGLLLKTKQIKRMISSYVGEN 114
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Cavefish
Match: oxct1b (succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial-like [Source:NCBI gene;Acc:103028178]) HSP 1 Score: 83.5741 bits (205), Expect = 1.350e-19 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y + E+++DIP+GSTLLVGG FG+CGIPENLI GL ++ +K +T VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 51 YGSPTEAVRDIPDGSTLLVGG-------FGLCGIPENLISGLLKTGVKQITAVSNNAGVDNFGLGLLLKTKQIKRMISSYVGEN 127
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Sea Lamprey
Match: oxct1b (3-oxoacid CoA transferase 1b [Source:ZFIN;Acc:ZDB-GENE-060929-212]) HSP 1 Score: 60.077 bits (144), Expect = 2.574e-12 Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 184 GFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 GFG+CGIPENL+ L QS +K++T VSNNAG+ +GL L RQ+K + Y +N Sbjct: 1 GFGLCGIPENLLEALVQSGVKNITAVSNNAGVDGFGLGKLLNTRQIKRMVSSYVGEN 57
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Nematostella
Match: EDO27730 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T8F7]) HSP 1 Score: 77.7962 bits (190), Expect = 8.299e-20 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y +E+IKDIP+ LLVGG FG+CGIPENLI LN S +K LT VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 12 YNTPDEAIKDIPDNCKLLVGG-------FGLCGIPENLIIALNASGVKGLTCVSNNAGVDNFGLGLLLQTKQIKRMISSYVGEN 88
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Nematostella
Match: EDO46906 (Succinyl-CoA:3-ketoacid-coenzyme A transferase [Source:UniProtKB/TrEMBL;Acc:A7RNT1]) HSP 1 Score: 80.8777 bits (198), Expect = 5.191e-19 Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 7 KGIKYLIPNGSTLKISIIRKLSVSVVNSFKPVYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 +G + N ++ R LS S + Y +E+IKDIP+ LLVGG FG+CGIPENLI LN S +K LT VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 12 RGAGFRTFNNRIFFSNVSRSLSTSQ-SKLAKFYNTPDEAIKDIPDNCKLLVGG-------FGLCGIPENLIIALNTSGVKGLTCVSNNAGVDNFGLGLLLQTKQIKRMISSYVGEN 119
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Medaka
Match: oxct1a (3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:101163581]) HSP 1 Score: 78.1814 bits (191), Expect = 1.287e-17 Identity = 38/84 (45.24%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 103 YTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDN 354 Y++ E++KDIP+G+ +LVGG FG+CGIPENLI L +S + LT VSNNAG+ ++GL +L + +Q+K + Y +N Sbjct: 52 YSDPSEAVKDIPDGAVILVGG-------FGLCGIPENLINSLLKSGVTGLTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGEN 128
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Planmine SMEST
Match: SMESG000080424.1 (SMESG000080424.1) HSP 1 Score: 184.111 bits (466), Expect = 1.108e-56 Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 1 Query: 1 MIKGIKYLIPNGSTLKISIIRKLSVSVVNSFKPVYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNN 357 MIKGIKYLIPN STLKISIIRKLSVSVVNSFKP+YTNAEESIKDIPNGSTLLVG GFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGL IL RQ+K + + +NN Sbjct: 15 MIKGIKYLIPNRSTLKISIIRKLSVSVVNSFKPIYTNAEESIKDIPNGSTLLVG-------GFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLGILLNSRQIKRMISSFVGENN 126
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Planmine SMEST
Match: SMESG000080432.1 (SMESG000080432.1) HSP 1 Score: 171.014 bits (432), Expect = 8.550e-52 Identity = 90/119 (75.63%), Postives = 98/119 (82.35%), Query Frame = 1 Query: 1 MIKGIKYLIPNGSTLKISIIRKLSVSVVNSFKPVYTNAEESIKDIPNGSTLLVGGNICESKGFGICGIPENLIGGLNQSKIKDLTIVSNNAGLYDWGLSILFELRQVKVLNLLYANDNN 357 MIKGIKYLIP+GS LKISIIR LSVSVVNSFKPVYTNAEE+IKDIPNGSTLLVG GFGICGIPENLIGGLNQS+I+DLTIVSNNAGL D GL +L RQ+K + Y +NN Sbjct: 1 MIKGIKYLIPSGSNLKISIIRNLSVSVVNSFKPVYTNAEEAIKDIPNGSTLLVG-------GFGICGIPENLIGGLNQSRIRDLTIVSNNAGLIDCGLGLLLNSRQIKRMISSYVGENN 112 The following BLAST results are available for this feature:
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 2
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 3
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 3
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Succinyl-CoA:3-ketoacid-coenzyme A transferase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020710 ID=SMED30020710|Name=Succinyl-CoA:3-ketoacid-coenzyme A transferase|organism=Schmidtea mediterranea sexual|type=transcript|length=375bpback to top protein sequence of SMED30020710-orf-1 >SMED30020710-orf-1 ID=SMED30020710-orf-1|Name=SMED30020710-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=125bp MIKGIKYLIPNGSTLKISIIRKLSVSVVNSFKPVYTNAEESIKDIPNGSTback to top Annotated Terms
The following terms have been associated with this transcript:
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