Poly [ADP-ribose] polymerase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020704 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14Note: Hover over icons to view figure legend
Homology
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Match: PARP2 (poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]) HSP 1 Score: 126.716 bits (317), Expect = 1.905e-45 Identity = 67/139 (48.20%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCK--KEILETNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY ++ ET K S + L+P ES+L+ ++Q+L++++ +++ M + + EMKY+ K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 178 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALMEACNEFYTRIPHDFG 314 HSP 2 Score: 77.7962 bits (190), Expect = 1.905e-45 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L NL AKE F KK Sbjct: 121 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKK 179 HSP 3 Score: 70.0922 bits (170), Expect = 9.804e-12 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+NLHC L +D+ Y+ + Y Sbjct: 311 HDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCA--LRPLDHESYEFKVISQYL 386
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Match: PARP2 (poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]) HSP 1 Score: 126.716 bits (317), Expect = 2.523e-45 Identity = 67/139 (48.20%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCK--KEILETNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY ++ ET K S + L+P ES+L+ ++Q+L++++ +++ M + + EMKY+ K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 165 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALMEACNEFYTRIPHDFG 301 HSP 2 Score: 77.411 bits (189), Expect = 2.523e-45 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L NL AKE F KK Sbjct: 108 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKK 166 HSP 3 Score: 69.707 bits (169), Expect = 1.432e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+NLHC L +D+ Y+ + Y Sbjct: 298 HDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCA--LRPLDHESYEFKVISQYL 373
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Match: PARP2 (poly(ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:HGNC:272]) HSP 1 Score: 126.716 bits (317), Expect = 2.717e-45 Identity = 67/139 (48.20%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCK--KEILETNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY ++ ET K S + L+P ES+L+ ++Q+L++++ +++ M + + EMKY+ K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 178 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALMEACNEFYTRIPHDFG 314 HSP 2 Score: 77.411 bits (189), Expect = 2.717e-45 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L NL AKE F KK Sbjct: 121 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKK 179 HSP 3 Score: 69.707 bits (169), Expect = 1.378e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+NLHC L +D+ Y+ + Y Sbjct: 311 HDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCA--LRPLDHESYEFKVISQYL 386
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Match: PARP1 (poly(ADP-ribose) polymerase 1 [Source:HGNC Symbol;Acc:HGNC:270]) HSP 1 Score: 85.8853 bits (211), Expect = 3.436e-21 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEP-IESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K + +KT N W + F K K+ ++IDY + E + ++ + P +SKL + +QDL++++FD++ M A+ E + D K+PLG+L++ QI+A Y L E++ +S+G SS+ ++ N +YT IPHDFG Sbjct: 616 KLYEEKTGNAWHSKN-FTKYPKKFYPLEIDYGQDE-----EAVKKLTVNPGTKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQG-SSDSQILDLSNRFYTLIPHDFG 745 HSP 2 Score: 37.3502 bits (85), Expect = 3.436e-21 Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 3 Query: 795 NNNKFYIIQLLKDEKEPIYYVWMRWARVGK-IGQMKLTRFYNNLAAAKECFMK 950 N +Y +QLL+D+KE Y+++ W RVG IG KL + + A E FMK Sbjct: 565 GTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAI-EHFMK 616
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Match: PARP3 (poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]) HSP 1 Score: 65.0846 bits (157), Expect = 6.603e-18 Identity = 41/143 (28.67%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQI---DYCKKEILETNKIASQVKLEPIES-KLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 + K+F +KTKN+W +R F GKY L+++ D ++ +++ ++ + + ++ L+ Q L+ +F + + ++ M D K+PLG+L++ QI G+ AL +E L +SL + + +YT IPH+FG Sbjct: 124 DFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTVIPHNFG 266 HSP 2 Score: 46.9802 bits (110), Expect = 6.603e-18 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 KFYIIQLL+D + W RW RVG++GQ K+ F L AK+ F KK Sbjct: 81 KFYIIQLLQDSNR-FFTCWNRWGRVGEVGQSKINHF-TRLEDAKKDFEKK 128
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Celegans
Match: parp-1 (Poly [ADP-ribose] polymerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]) HSP 1 Score: 79.337 bits (194), Expect = 1.161e-20 Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 1003 FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 F++KTKNDW R+ F K+ G + V+ DY + + +I K + L + +++++ +FD++ M A+ + D NK+PLGRL+ QI + L +I LL + ++ N +YT IPH+FG Sbjct: 542 FHEKTKNDWIYRKHFRKMPGMFSYVETDYSEFAQITDTEITPGSK-----TLLPKSVKEVVMSIFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEVLNDISDLLVKLPIDASRILDFSNKFYTIIPHNFG 670 HSP 2 Score: 40.817 bits (94), Expect = 1.161e-20 Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 780 TNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVG-KIGQMKLTRFYNNLAA 929 T+L N N +Y IQLLKD++ YYV+ W RVG ++G K + N+ A Sbjct: 484 TDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRVGTEVGGNKHESYSNSNEA 534
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Celegans
Match: parp-1 (Poly [ADP-ribose] polymerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]) HSP 1 Score: 53.9138 bits (128), Expect = 2.603e-7 Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 1 Query: 1192 VFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 +FD++ M A+ + D NK+PLGRL+ QI + L +I LL + ++ N +YT IPH+FG Sbjct: 3 IFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEVLNDISDLLVKLPIDASRILDFSNKFYTIIPHNFG 73
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Fly
Match: Parp (gene:FBgn0010247 transcript:FBtr0113885) HSP 1 Score: 84.3445 bits (207), Expect = 3.569e-16 Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEP--IESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N + + DKT N+++ R F K G+ ++I Y + L VK E SKLE +Q+L++++FD+ MN + E D +K+PLG+L+ QI++ Y ++EI +L G ++ K L+ A N +YT IPH+FG Sbjct: 596 NFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKL--------VKHESHFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAK-LIDATNRFYTLIPHNFG 727
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Match: parp2 (poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]) HSP 1 Score: 119.783 bits (299), Expect = 6.204e-42 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 1021 NDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI-ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N+W+ R FEK+ GKYD+V +DY ++ E + S + +P + L K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY +L+ IE L + SNK L+ ACN +YTRIPHDFG Sbjct: 255 NEWEHRASFEKVAGKYDMVFMDYSTEDKGEEKAVVPSATQKKPCQ--LNSKVQSLLELICDLKAMEECVLEMKFDTKKAPLGKLTAEQIRAGYASLKRIEECLKK-KGSNKELLDACNQFYTRIPHDFG 380 HSP 2 Score: 72.4034 bits (176), Expect = 6.204e-42 Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAA 932 QTNLQFNNNK+Y+IQLL+D+ Y VW+RW RVGK+GQ L NLA A Sbjct: 190 QTNLQFNNNKYYLIQLLEDDSAKAYSVWLRWGRVGKVGQNNLVSCGANLAQA 241 HSP 3 Score: 70.8626 bits (172), Expect = 4.143e-12 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PP+IRS E+K ++ LLETLSDI+IA+K++ N HPLDR Y +L+C + + D+ Y+V Sbjct: 377 HDFGLRTPPIIRSEEELKEKITLLETLSDIQIAVKMVQSNVKSDEHPLDRQYHSLNCQLQPLDTDSNEYKV 447
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Match: parp2 (poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]) HSP 1 Score: 119.783 bits (299), Expect = 6.795e-42 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 1021 NDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI-ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N+W+ R FEK+ GKYD+V +DY ++ E + S + +P + L K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY +L+ IE L + SNK L+ ACN +YTRIPHDFG Sbjct: 254 NEWEHRASFEKVAGKYDMVFMDYSTEDKGEEKAVVPSATQKKPCQ--LNSKVQSLLELICDLKAMEECVLEMKFDTKKAPLGKLTAEQIRAGYASLKRIEECLKK-KGSNKELLDACNQFYTRIPHDFG 379 HSP 2 Score: 72.4034 bits (176), Expect = 6.795e-42 Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAA 932 QTNLQFNNNK+Y+IQLL+D+ Y VW+RW RVGK+GQ L NLA A Sbjct: 189 QTNLQFNNNKYYLIQLLEDDSAKAYSVWLRWGRVGKVGQNNLVSCGANLAQA 240 HSP 3 Score: 70.8626 bits (172), Expect = 4.320e-12 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PP+IRS E+K ++ LLETLSDI+IA+K++ N HPLDR Y +L+C + + D+ Y+V Sbjct: 376 HDFGLRTPPIIRSEEELKEKITLLETLSDIQIAVKMVQSNVKSDEHPLDRQYHSLNCQLQPLDTDSNEYKV 446
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Match: parp2 (poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]) HSP 1 Score: 120.168 bits (300), Expect = 2.273e-41 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 1021 NDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI-ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N+W+ R FEK+ GKYD+V +DY ++ E + S + +P + L K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY +L+ IE L + SNK L+ ACN +YTRIPHDFG Sbjct: 253 NEWEHRASFEKVAGKYDMVFMDYSTEDKGEEKAVVPSATQKKPCQ--LNSKVQSLLELICDLKAMEECVLEMKFDTKKAPLGKLTAEQIRAGYASLKRIEECLKK-KGSNKELLDACNQFYTRIPHDFG 378 HSP 2 Score: 70.4774 bits (171), Expect = 2.273e-41 Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 780 TNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAA 932 TNLQFNNNK+Y+IQLL+D+ Y VW+RW RVGK+GQ L NLA A Sbjct: 189 TNLQFNNNKYYLIQLLEDDSAKAYSVWLRWGRVGKVGQNNLVSCGANLAQA 239 HSP 3 Score: 70.8626 bits (172), Expect = 5.124e-12 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PP+IRS E+K ++ LLETLSDI+IA+K++ N HPLDR Y +L+C + + D+ Y+V Sbjct: 375 HDFGLRTPPIIRSEEELKEKITLLETLSDIQIAVKMVQSNVKSDEHPLDRQYHSLNCQLQPLDTDSNEYKV 445
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Match: parp2 (poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]) HSP 1 Score: 73.9442 bits (180), Expect = 2.529e-28 Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 1015 TKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIA-SQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKA 1290 TKN+W+ R FEK+ GKYD+V +DY ++ E + S + +P + L K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+A Sbjct: 181 TKNEWEHRASFEKVAGKYDMVFMDYSTEDKGEEKAVVPSATQKKPCQ--LNSKVQSLLELICDLKAMEECVLEMKFDTKKAPLGKLTAEQIRA 271 HSP 2 Score: 72.7886 bits (177), Expect = 2.529e-28 Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAA 932 QTNLQFNNNK+Y+IQLL+D+ Y VW+RW RVGK+GQ L NLA A Sbjct: 118 QTNLQFNNNKYYLIQLLEDDSAKAYSVWLRWGRVGKVGQNNLVSCGANLAQA 169
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Match: parp1 (poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]) HSP 1 Score: 80.4925 bits (197), Expect = 6.694e-20 Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLV-QACNTYYTRIPHDFG 1404 N + +KT N W F K K+ ++IDY + E E K +Q +S+LE+ +QDL+R++FD++ M A+ E + D K+PLG+L++ QI++ Y L E++ +++ SS++SL+ N +YT IPHDFG Sbjct: 610 NFCGVYEEKTGNAWASSN-FTKYPNKFYPLEIDYGQDE--EAVKKLTQS--AGAKSQLEKPVQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAVAD--SSSESLILDLSNRFYTLIPHDFG 742 HSP 2 Score: 37.7354 bits (86), Expect = 6.694e-20 Identity = 19/46 (41.30%), Postives = 29/46 (63.04%), Query Frame = 3 Query: 795 NNNKFYIIQLLKDEKEPIYYVWMRWARVG-KIGQMKLTRFYNNLAA 929 N +Y +QLL+D+ + Y+V+ W RVG IG KL +FY+ +A Sbjct: 562 GTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNKLDKFYDKNSA 607
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Match: gldn (gliomedin [Source:Xenbase;Acc:XB-GENE-1004090]) HSP 1 Score: 125.946 bits (315), Expect = 1.497e-43 Identity = 62/137 (45.26%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDY-CKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R +FEK GKYD++Q+DY +++L+ +A KLE +L+ +Q+L++++ +LK M + V EMK+D K PLG+LT QI+AGY +L+ IE + + + L++ACN +YTRIPHDFG Sbjct: 155 KKFLDKTKNLWTERAQFEKCPGKYDMLQMDYNATEQVLKEESLADLPKLE---CQLDLSIQELIQLICNLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKK-QKFGRDLLEACNEFYTRIPHDFG 287 HSP 2 Score: 72.4034 bits (176), Expect = 1.497e-43 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + VWMRW RVGK+GQ L +L AK+ F KK Sbjct: 98 QTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKK 156
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Match: gldn (gliomedin [Source:Xenbase;Acc:XB-GENE-1004090]) HSP 1 Score: 124.79 bits (312), Expect = 2.428e-43 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIA--SQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R +FEK GKYD++Q+DY E E + S L +E +L+ +Q+L++++ +LK M + V EMK+D K PLG+LT QI+AGY +L+ IE + + + L++ACN +YTRIPHDFG Sbjct: 337 KKFLDKTKNLWTERAQFEKCPGKYDMLQMDYNATEQEEERAVKEESLADLPKLECQLDLSIQELIQLICNLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKK-QKFGRDLLEACNEFYTRIPHDFG 473 HSP 2 Score: 72.7886 bits (177), Expect = 2.428e-43 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + VWMRW RVGK+GQ L +L AK+ F KK Sbjct: 280 QTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKK 338 HSP 3 Score: 58.9214 bits (141), Expect = 3.434e-8 Identity = 26/71 (36.62%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PPLIR++ ++ ++ LLE L DI+IA+KL + + + HP+DR Y+ L+C I + + +Q+ Sbjct: 470 HDFGLRTPPLIRTLEDLTVKVRLLEALGDIQIAVKLASMDLNSLEHPIDRQYRQLNCSIQPLDKTSSTFQL 540
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Match: gldn (gliomedin [Source:Xenbase;Acc:XB-GENE-1004090]) HSP 1 Score: 124.79 bits (312), Expect = 2.469e-43 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIA--SQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R +FEK GKYD++Q+DY E E + S L +E +L+ +Q+L++++ +LK M + V EMK+D K PLG+LT QI+AGY +L+ IE + + + L++ACN +YTRIPHDFG Sbjct: 337 KKFLDKTKNLWTERAQFEKCPGKYDMLQMDYNATEQEEERAVKEESLADLPKLECQLDLSIQELIQLICNLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKK-QKFGRDLLEACNEFYTRIPHDFG 473 HSP 2 Score: 72.7886 bits (177), Expect = 2.469e-43 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + VWMRW RVGK+GQ L +L AK+ F KK Sbjct: 280 QTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKK 338 HSP 3 Score: 59.3066 bits (142), Expect = 2.465e-8 Identity = 26/71 (36.62%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PPLIR++ ++ ++ LLE L DI+IA+KL + + + HP+DR Y+ L+C I + + +Q+ Sbjct: 470 HDFGLRTPPLIRTLEDLTVKVRLLEALGDIQIAVKLASMDLNSLEHPIDRQYRQLNCSIQPLDKTSSTFQL 540
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Match: gldn (gliomedin [Source:Xenbase;Acc:XB-GENE-1004090]) HSP 1 Score: 124.79 bits (312), Expect = 2.524e-43 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIA--SQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R +FEK GKYD++Q+DY E E + S L +E +L+ +Q+L++++ +LK M + V EMK+D K PLG+LT QI+AGY +L+ IE + + + L++ACN +YTRIPHDFG Sbjct: 69 KKFLDKTKNLWTERAQFEKCPGKYDMLQMDYNATEQEEERAVKEESLADLPKLECQLDLSIQELIQLICNLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKK-QKFGRDLLEACNEFYTRIPHDFG 205 HSP 2 Score: 72.7886 bits (177), Expect = 2.524e-43 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 774 FQTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + VWMRW RVGK+GQ L +L AK+ F KK Sbjct: 11 LQTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKK 70 HSP 3 Score: 58.151 bits (139), Expect = 4.311e-8 Identity = 26/71 (36.62%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PPLIR++ ++ ++ LLE L DI+IA+KL + + + HP+DR Y+ L+C I + + +Q+ Sbjct: 202 HDFGLRTPPLIRTLEDLTVKVRLLEALGDIQIAVKLASMDLNSLEHPIDRQYRQLNCSIQPLDKTSSTFQL 272
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Match: gldn (gliomedin [Source:Xenbase;Acc:XB-GENE-1004090]) HSP 1 Score: 124.79 bits (312), Expect = 3.479e-43 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIA--SQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R +FEK GKYD++Q+DY E E + S L +E +L+ +Q+L++++ +LK M + V EMK+D K PLG+LT QI+AGY +L+ IE + + + L++ACN +YTRIPHDFG Sbjct: 143 KKFLDKTKNLWTERAQFEKCPGKYDMLQMDYNATEQEEERAVKEESLADLPKLECQLDLSIQELIQLICNLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKK-QKFGRDLLEACNEFYTRIPHDFG 279 HSP 2 Score: 72.4034 bits (176), Expect = 3.479e-43 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + VWMRW RVGK+GQ L +L AK+ F KK Sbjct: 86 QTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKK 144 HSP 3 Score: 58.151 bits (139), Expect = 5.252e-8 Identity = 26/71 (36.62%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R PPLIR++ ++ ++ LLE L DI+IA+KL + + + HP+DR Y+ L+C I + + +Q+ Sbjct: 276 HDFGLRTPPLIRTLEDLTVKVRLLEALGDIQIAVKLASMDLNSLEHPIDRQYRQLNCSIQPLDKTSSTFQL 346
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Match: Parp2 (poly (ADP-ribose) polymerase family, member 2 [Source:MGI Symbol;Acc:MGI:1341112]) HSP 1 Score: 136.732 bits (343), Expect = 6.032e-48 Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+ FEK+ GKYD++Q+DY E+ K + L+P ES+L+ ++Q+L++++ +++ M + + EMKYD + PLG+LT AQIKAGY +L++IE + G ++LV+ACN +YTRIPHDFG Sbjct: 158 KKFLDKTKNNWEDRENFEKVPGKYDMLQMDYAASTQDES-KTKEEETLKP-ESQLDLRVQELLKLICNVQTMEEMMIEMKYDTKRAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALVEACNEFYTRIPHDFG 290 HSP 2 Score: 75.8702 bits (185), Expect = 6.032e-48 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK GQ L +L AKE F KK Sbjct: 101 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKTGQHSLVTCSGDLNKAKEIFQKK 159 HSP 3 Score: 65.4698 bits (158), Expect = 2.236e-10 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCII 2547 H + IPP+IR+ E+ +++LLE L DI+IALKL+ HPLD+HY+NLHC + Sbjct: 287 HDFGLSIPPVIRTEKELSDKVKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCAL 345
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Match: Parp1 (poly (ADP-ribose) polymerase family, member 1 [Source:MGI Symbol;Acc:MGI:1340806]) HSP 1 Score: 82.4185 bits (202), Expect = 1.079e-20 Identity = 48/137 (35.04%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEP-IESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K + +KT N W + F K K+ ++IDY + E + ++ ++P +SKL + +Q+L+ ++FD++ M A+ E + D K+PLG+L+ QI+A Y L E++ +S+G SS ++ N +YT IPHDFG Sbjct: 616 KLYEEKTGNAWHSKN-FTKYPKKFYPLEIDYGQDE-----EAVKKLTVKPGTKSKLPKPVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAVSQG-SSESQILDLSNRFYTLIPHDFG 745 HSP 2 Score: 38.891 bits (89), Expect = 1.079e-20 Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 3 Query: 795 NNNKFYIIQLLKDEKEPIYYVWMRWARVGK-IGQMKLTRFYNNLAAAKECFMK 950 N +Y +QLL+D+KE Y+++ W RVG IG KL + + A E FMK Sbjct: 565 GTNSYYKLQLLEDDKESRYWIFRSWGRVGTVIGSNKLEQMPSKEDAV-EHFMK 616
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Match: Parp3 (poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]) HSP 1 Score: 68.9366 bits (167), Expect = 4.651e-18 Identity = 40/136 (29.41%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 1015 TKNDWQDRQKFEKINGKYDLVQIDY-CKKEILETNKIASQVKLEPIES-----KLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 TKN W++R +F KY L+++ + + ++ QV P+ + L+ Q+L+ +F + +A++ M D K+PLG+LT+ QI G+ AL +E + +SL + + +YT IPH+FG Sbjct: 130 TKNKWEERDRFVAQPNKYTLIEVQGEAESQEAVVKALSPQVYSGPVRTVVKPCSLDPATQNLITNIFSKEMFKNAMTLMNLDVKKMPLGKLTKQQIARGFEALEALEEAMKNPTGDGQSLEELSSCFYTVIPHNFG 265 HSP 2 Score: 43.1282 bits (100), Expect = 4.651e-18 Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRF 911 KFYIIQLL++ ++ W RW RVG++GQ K+ F Sbjct: 79 KFYIIQLLEEGSR--FFCWNRWGRVGEVGQSKMNHF 112
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Match: Parp3 (poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]) HSP 1 Score: 68.5514 bits (166), Expect = 7.314e-18 Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 1015 TKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIES-----KLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 TKN W++R +F KY L+++ + E+ + +V P+ + L+ Q+L+ +F + +A++ M D K+PLG+LT+ QI G+ AL +E + +SL + + +YT IPH+FG Sbjct: 130 TKNKWEERDRFVAQPNKYTLIEV----QGEAESQEAVVKVYSGPVRTVVKPCSLDPATQNLITNIFSKEMFKNAMTLMNLDVKKMPLGKLTKQQIARGFEALEALEEAMKNPTGDGQSLEELSSCFYTVIPHNFG 260 HSP 2 Score: 43.1282 bits (100), Expect = 7.314e-18 Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRF 911 KFYIIQLL++ ++ W RW RVG++GQ K+ F Sbjct: 79 KFYIIQLLEEGSR--FFCWNRWGRVGEVGQSKMNHF 112
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Match: Parp3 (poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]) HSP 1 Score: 68.1662 bits (165), Expect = 8.961e-18 Identity = 40/135 (29.63%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 1015 TKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIES-----KLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 TKN W++R +F KY L+++ + E+ + +V P+ + L+ Q+L+ +F + +A++ M D K+PLG+LT+ QI G+ AL +E + +SL + + +YT IPH+FG Sbjct: 130 TKNKWEERDRFVAQPNKYTLIEV----QGEAESQEAVVKVYSGPVRTVVKPCSLDPATQNLITNIFSKEMFKNAMTLMNLDVKKMPLGKLTKQQIARGFEALEALEEAMKNPTGDGQSLEELSSCFYTVIPHNFG 260 HSP 2 Score: 43.1282 bits (100), Expect = 8.961e-18 Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRF 911 KFYIIQLL++ ++ W RW RVG++GQ K+ F Sbjct: 79 KFYIIQLLEEGSR--FFCWNRWGRVGEVGQSKMNHF 112
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Match: sp|O88554|PARP2_MOUSE (Poly [ADP-ribose] polymerase 2 OS=Mus musculus OX=10090 GN=Parp2 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 3.677e-47 Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+ FEK+ GKYD++Q+DY E+ K + L+P ES+L+ ++Q+L++++ +++ M + + EMKYD + PLG+LT AQIKAGY +L++IE + G ++LV+ACN +YTRIPHDFG Sbjct: 158 KKFLDKTKNNWEDRENFEKVPGKYDMLQMDYAASTQDES-KTKEEETLKP-ESQLDLRVQELLKLICNVQTMEEMMIEMKYDTKRAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALVEACNEFYTRIPHDFG 290 HSP 2 Score: 75.8702 bits (185), Expect = 3.677e-47 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK GQ L +L AKE F KK Sbjct: 101 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKTGQHSLVTCSGDLNKAKEIFQKK 159 HSP 3 Score: 65.4698 bits (158), Expect = 1.564e-9 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCII 2547 H + IPP+IR+ E+ +++LLE L DI+IALKL+ HPLD+HY+NLHC + Sbjct: 287 HDFGLSIPPVIRTEKELSDKVKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCAL 345
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Match: sp|Q9UGN5|PARP2_HUMAN (Poly [ADP-ribose] polymerase 2 OS=Homo sapiens OX=9606 GN=PARP2 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.206e-44 Identity = 67/139 (48.20%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCK--KEILETNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY ++ ET K S + L+P ES+L+ ++Q+L++++ +++ M + + EMKY+ K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 178 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHG-RALMEACNEFYTRIPHDFG 314 HSP 2 Score: 77.411 bits (189), Expect = 1.206e-44 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L NL AKE F KK Sbjct: 121 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKK 179 HSP 3 Score: 69.707 bits (169), Expect = 6.620e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+NLHC L +D+ Y+ + Y Sbjct: 311 HDFGLRTPPLIRTQKELSEKIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCA--LRPLDHESYEFKVISQYL 386
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Match: sp|Q5Z8Q9|PRP2A_ORYSJ (Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica OX=39947 GN=PARP2-A PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.686e-24 Identity = 46/135 (34.07%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 1000 RFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 +F+ KT N W DR+ FE KY +++DY + + ETNK S + E+KLE ++ + ++ ++ M + E+ Y+++K+PLG+L+++ I GY L+ I ++S + + L Q +YT IPHDFG Sbjct: 259 KFHGKTNNHWSDRKSFECYARKYTWLEMDYGEAD-RETNKKVSPSTDQIKETKLETRIASFISLICNISMMKQQMVEIGYNSDKLPLGKLSKSTIFKGYDVLKRISNVIS--RADRRQLEQLTGEFYTVIPHDFG 390 HSP 2 Score: 50.447 bits (119), Expect = 1.686e-24 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 3 Query: 738 LILNDKSYIRKKFQTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKL 902 L+ D+ Y QTN+ NNNKFYIIQ L+ + + V+ RW RVG GQ KL Sbjct: 188 LLKGDEIYDATMNQTNVGDNNNKFYIIQALESDAGGSFMVYNRWGRVGARGQDKL 242
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Match: sp|O50017|PARP2_MAIZE (Poly [ADP-ribose] polymerase 2 OS=Zea mays OX=4577 GN=PARP2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.035e-24 Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1000 RFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEI-LETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 +F++KT N W DR+ F+ KY +++DY + E +E I Q+K E+KLE ++ + ++ ++ M + E+ Y+ K+PLG+L +A I GY L+ I ++S+ + + L Q +YT IPHDFG Sbjct: 254 KFHNKTNNHWSDRKNFKCYAKKYTWLEMDYGETEKEIEKGSITDQIK----ETKLETRIAQFISLICNISMMKQRMVEIGYNAEKLPLGKLRKATILKGYHVLKRISDVISK--ADRRHLEQLTGEFYTVIPHDFG 383 HSP 2 Score: 49.6766 bits (117), Expect = 9.035e-24 Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 735 MLILNDKSYIRKKFQTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKL 902 +L + D+ Y QTN+ NNNKFYIIQ+L+ + + V+ RW RVG GQ KL Sbjct: 182 VLQVGDEIYDATLNQTNVGDNNNKFYIIQVLESDAGGSFMVYNRWGRVGVRGQDKL 237
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Match: sp|Q11207|PARP2_ARATH (Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=PARP2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.320e-23 Identity = 42/141 (29.79%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 991 LSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKE---ILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 + +F DKTKN W DR++F Y +++DY K+E + + +S +++P +SKL+ ++ + ++ ++ M + E+ Y+ NK+PLG+++++ I GY L+ I ++ L + +YT IPHDFG Sbjct: 230 FTNKFNDKTKNYWSDRKEFIPHPKSYTWLEMDYGKEENDSPVNNDIPSSSSEVKPEQSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGKISKSTISKGYEVLKRISEVID--RYDRTRLEELSGEFYTVIPHDFG 368 HSP 2 Score: 55.4546 bits (132), Expect = 1.320e-23 Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTN++ NNNKF+++Q+L+ + + Y V+ RW RVG GQ KL Y++ A E F K Sbjct: 175 QTNVRDNNNKFFVLQVLESDSKKTYMVYTRWGRVGVKGQSKLDGPYDSWDRAIEIFTNK 233
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Match: A0A3B4XBC1 (Poly [ADP-ribose] polymerase OS=Seriola lalandi dorsalis OX=1841481 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.992e-47 Identity = 69/136 (50.74%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+ R FEK+ GKYD+V +DY E E V + I SKL+ K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY AL+ IE L SN+ L++ACN +YTRIPHDFG Sbjct: 248 KKFLDKTKNEWEQRASFEKVAGKYDMVFMDYSTNEKEEEKTTVDTVPKKKI-SKLDVKIQSLLELICDLKAMEECVLEMKFDTRKAPLGKLTSEQIRAGYSALKRIEECLKR-KGSNRELLEACNQFYTRIPHDFG 381 HSP 2 Score: 84.3445 bits (207), Expect = 1.992e-47 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ +Y VWMRW RVGK+GQ LT F +L AK+ F KK Sbjct: 191 QTNLQFNNNKYYLIQLLEDDNSKVYSVWMRWGRVGKVGQNSLTAFGGDLLKAKDVFKKK 249 HSP 3 Score: 69.3218 bits (168), Expect = 2.837e-8 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H ++ PP+I + E+K+++ LLE LSDI+IA+K++ +ED HPLDR Y++L C +N + YQV Sbjct: 378 HDFGLKTPPVIHTEDELKKKIALLEALSDIQIAVKMVQSSEDGDEHPLDRQYRSLQCKLNPLDSSTHEYQV 448
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Match: A0A2U9BIV2 (Poly [ADP-ribose] polymerase OS=Scophthalmus maximus OX=52904 GN=SMAX5B_006454 PE=4 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.899e-47 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIE--SKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W+ R FEK+ GKYD+V +DY KE K S V P + SKL K+Q L+ ++ DLK M + V EMKYD K PLG+LT QI+AGY AL++IE L + SS + L++ACN +YTRIPHDFG Sbjct: 247 KKFLDKTKNAWEQRASFEKVAGKYDMVFMDYSAKE-----KEESTVSTVPTKKTSKLNVKIQSLLELICDLKAMEECVLEMKYDTRKAPLGKLTTEQIRAGYAALKKIEACLKKKGSS-RELLEACNQFYTRIPHDFG 378 HSP 2 Score: 81.2629 bits (199), Expect = 6.899e-47 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ +Y VWMRW RVGK+GQ LT +L AK FMKK Sbjct: 190 QTNLQFNNNKYYLIQLLEDDISKVYSVWMRWGRVGKVGQSSLTACGGDLLKAKNFFMKK 248 HSP 3 Score: 63.1586 bits (152), Expect = 2.334e-6 Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYFY 2607 H ++ PP+I S E+K ++ LLE LSDI+IA+K++ +E HPLDR Y +L C L +D+ ++ ++ Y + Sbjct: 375 HDFGLKTPPIIHSEEELKAKIALLEALSDIQIAVKMVQSSEGSDEHPLDRQYCSLQC--KLQPLDSGSHEYKVVEKYLH 451
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Match: A0A340XU05 (Poly [ADP-ribose] polymerase OS=Lipotes vexillifer OX=118797 GN=PARP2 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.011e-46 Identity = 70/139 (50.36%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILE--TNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY K E TNK S + L+P ES+L+ ++Q+L++++ +++ M + + EMKYD K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 186 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYTTKTQSEEETNKGESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMVEMKYDTKKAPLGKLTVAQIKAGYQSLKKIEDCIRTGQHG-RALIEACNEFYTRIPHDFG 322 HSP 2 Score: 77.7962 bits (190), Expect = 1.011e-46 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L +L+ AKE F KK Sbjct: 129 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGDLSKAKEIFQKK 187 HSP 3 Score: 66.6254 bits (161), Expect = 2.220e-7 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+ LHC ++ +D+ Y+ + Y Sbjct: 319 HDFGLRTPPLIRTEKELSDKVQLLEALGDIEIAIKLVRTELQSPEHPLDQHYRKLHCALH--PLDHESYEFKVISQYL 394
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Match: A0A3B4TRT7 (Poly [ADP-ribose] polymerase OS=Seriola dumerili OX=41447 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.044e-46 Identity = 68/136 (50.00%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+ R FEK+ GKYD+V +DY E E V + SKL+ K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY AL+ IE L SN+ L++ACN +YTRIPHDFG Sbjct: 246 KKFLDKTKNEWEQRASFEKVAGKYDMVFMDYSTNEKEEEKTTVDTVPKKKT-SKLDVKIQSLLELICDLKAMEECVLEMKFDTRKAPLGKLTSEQIRAGYSALKRIEECLKR-KGSNRELLEACNQFYTRIPHDFG 379 HSP 2 Score: 83.9593 bits (206), Expect = 1.044e-46 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ +Y VWMRW RVGK+GQ LT F +L AK+ F KK Sbjct: 189 QTNLQFNNNKYYLIQLLEDDNSKVYSVWMRWGRVGKVGQNNLTAFGGDLLKAKDVFKKK 247 HSP 3 Score: 71.633 bits (174), Expect = 5.413e-9 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H ++ PP+I + E+K+++ LLE LSDI+IA+K++ +ED HPLDR Y++L C +NL+ YQV Sbjct: 376 HDFGLKTPPVIHTEDELKKKIALLEALSDIQIAVKMVQSSEDGDEHPLDRQYRSLQCKLNLLDPSTHEYQV 446
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Match: A0A340XMH8 (Poly [ADP-ribose] polymerase OS=Lipotes vexillifer OX=118797 GN=PARP2 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.117e-46 Identity = 70/139 (50.36%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILE--TNKIAS-QVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR+KFEK+ GKYD++Q+DY K E TNK S + L+P ES+L+ ++Q+L++++ +++ M + + EMKYD K PLG+LT AQIKAGY +L++IE + G ++L++ACN +YTRIPHDFG Sbjct: 166 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYTTKTQSEEETNKGESLKSPLKP-ESQLDLRVQELIKLICNVQAMEEMMVEMKYDTKKAPLGKLTVAQIKAGYQSLKKIEDCIRTGQHG-RALIEACNEFYTRIPHDFG 302 HSP 2 Score: 77.411 bits (189), Expect = 1.117e-46 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ + + VWMRW RVGK+GQ L +L+ AKE F KK Sbjct: 109 QTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGDLSKAKEIFQKK 167 HSP 3 Score: 66.2402 bits (160), Expect = 2.474e-7 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PPLIR+ E+ +++LLE L DI+IA+KL+ HPLD+HY+ LHC ++ +D+ Y+ + Y Sbjct: 299 HDFGLRTPPLIRTEKELSDKVQLLEALGDIEIAIKLVRTELQSPEHPLDQHYRKLHCALH--PLDHESYEFKVISQYL 374
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Match: parp2 (poly(ADP-ribose) polymerase 2 [Source:NCBI gene;Acc:103030103]) HSP 1 Score: 136.346 bits (342), Expect = 9.250e-50 Identity = 68/137 (49.64%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKE-ILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR FEK+ GKYDLV +DY + E+ +++ V+ +P S+L+ KLQ L+ ++ D+K M + V EMK+D K PLG+LT QI+AGY +L+ IE L + SN+ L++ACN +YTRIPHDFG Sbjct: 240 KKFLDKTKNEWEDRANFEKVPGKYDLVFMDYTGNDNEEESCDVSTSVQKKP--SQLDLKLQSLLELICDIKAMEECVLEMKFDTKKAPLGKLTVEQIRAGYASLKRIEECLKK-KGSNRELLEACNQFYTRIPHDFG 373 HSP 2 Score: 82.0333 bits (201), Expect = 9.250e-50 Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNK+Y+IQLL+D+ Y VWMRW RVGK+GQ L NLA AKE F KK Sbjct: 183 QTNLQFNNNKYYLIQLLQDDHAKAYSVWMRWGRVGKVGQNNLVSCGGNLAEAKEIFKKK 241 HSP 3 Score: 68.1662 bits (165), Expect = 2.388e-11 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R+PP IR+ E+K ++ LLE LSDI+IA+K++ + HPLDR Y +L C + VT ++ +QV Sbjct: 370 HDFGLRVPPTIRTEEELKEKMALLEALSDIQIAVKMVESSSHSDEHPLDRQYHSLKCQLQPVTPNSHEFQV 440
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Match: parp2 (poly(ADP-ribose) polymerase 2 [Source:NCBI gene;Acc:103030103]) HSP 1 Score: 136.346 bits (342), Expect = 3.099e-49 Identity = 68/137 (49.64%), Postives = 97/137 (70.80%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKE-ILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN+W+DR FEK+ GKYDLV +DY + E+ +++ V+ +P S+L+ KLQ L+ ++ D+K M + V EMK+D K PLG+LT QI+AGY +L+ IE L + SN+ L++ACN +YTRIPHDFG Sbjct: 223 KKFLDKTKNEWEDRANFEKVPGKYDLVFMDYTGNDNEEESCDVSTSVQKKP--SQLDLKLQSLLELICDIKAMEECVLEMKFDTKKAPLGKLTVEQIRAGYASLKRIEECLKK-KGSNRELLEACNQFYTRIPHDFG 356 HSP 2 Score: 80.1073 bits (196), Expect = 3.099e-49 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 +TNLQFNNNK+Y+IQLL+D+ Y VWMRW RVGK+GQ L NLA AKE F KK Sbjct: 166 KTNLQFNNNKYYLIQLLQDDHAKAYSVWMRWGRVGKVGQNNLVSCGGNLAEAKEIFKKK 224 HSP 3 Score: 68.5514 bits (166), Expect = 2.020e-11 Identity = 30/71 (42.25%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H +R+PP IR+ E+K ++ LLE LSDI+IA+K++ + HPLDR Y +L C + VT ++ +QV Sbjct: 353 HDFGLRVPPTIRTEEELKEKMALLEALSDIQIAVKMVESSSHSDEHPLDRQYHSLKCQLQPVTPNSHEFQV 423
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Match: parp3 (poly(ADP-ribose) polymerase family member 3 [Source:NCBI gene;Acc:103034813]) HSP 1 Score: 78.1814 bits (191), Expect = 9.947e-21 Identity = 48/142 (33.80%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI---ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N K+F DKTKN+W DR+ F +GKY L+++D + ++ + + A++VK + L++ Q L++ +F+ +A+ M D K+PLG+L++ QI G+ AL EIE + S +L + + ++T IPH+FG Sbjct: 122 NFEKKFKDKTKNNWSDRENFVSHSGKYTLIEVDGDQDAEVKVDAVDGRAAEVKKNILPCTLDDPTQRLIKFIFNNDMFKEAMENMNLDIKKMPLGKLSKQQIAKGFEALEEIE-EAIKNKSRESTLSELSSKFFTIIPHNFG 262 HSP 2 Score: 42.743 bits (99), Expect = 9.947e-21 Identity = 22/44 (50.00%), Postives = 25/44 (56.82%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAK 935 KFY+IQ+L D YY W RW RVG+ GQ L N AA K Sbjct: 80 KFYVIQVLVDGG--TYYCWTRWGRVGESGQNNLAGPTNADAAIK 121
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Match: parp3 (poly(ADP-ribose) polymerase family member 3 [Source:NCBI gene;Acc:103034813]) HSP 1 Score: 77.7962 bits (190), Expect = 1.114e-20 Identity = 48/142 (33.80%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI---ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N K+F DKTKN+W DR+ F +GKY L+++D + ++ + + A++VK + L++ Q L++ +F+ +A+ M D K+PLG+L++ QI G+ AL EIE + S +L + + ++T IPH+FG Sbjct: 122 NFEKKFKDKTKNNWSDRENFVSHSGKYTLIEVDGDQDAEVKVDAVDGRAAEVKKNILPCTLDDPTQRLIKFIFNNDMFKEAMENMNLDIKKMPLGKLSKQQIAKGFEALEEIE-EAIKNKSRESTLSELSSKFFTIIPHNFG 262 HSP 2 Score: 42.743 bits (99), Expect = 1.114e-20 Identity = 22/44 (50.00%), Postives = 25/44 (56.82%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAK 935 KFY+IQ+L D YY W RW RVG+ GQ L N AA K Sbjct: 80 KFYVIQVLVDGG--TYYCWTRWGRVGESGQNNLAGPTNADAAIK 121
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Match: parp3 (poly(ADP-ribose) polymerase family member 3 [Source:NCBI gene;Acc:103034813]) HSP 1 Score: 78.1814 bits (191), Expect = 1.185e-20 Identity = 48/142 (33.80%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI---ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N K+F DKTKN+W DR+ F +GKY L+++D + ++ + + A++VK + L++ Q L++ +F+ +A+ M D K+PLG+L++ QI G+ AL EIE + S +L + + ++T IPH+FG Sbjct: 122 NFEKKFKDKTKNNWSDRENFVSHSGKYTLIEVDGDQDAEVKVDAVDGRAAEVKKNILPCTLDDPTQRLIKFIFNNDMFKEAMENMNLDIKKMPLGKLSKQQIAKGFEALEEIE-EAIKNKSRESTLSELSSKFFTIIPHNFG 262 HSP 2 Score: 42.3578 bits (98), Expect = 1.185e-20 Identity = 22/44 (50.00%), Postives = 25/44 (56.82%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAK 935 KFY+IQ+L D YY W RW RVG+ GQ L N AA K Sbjct: 80 KFYVIQVLVDGG--TYYCWTRWGRVGESGQNNLAGPTNADAAIK 121
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003213.1 (pep scaffold:Pmarinus_7.0:GL484848:6623:9574:1 gene:ENSPMAG00000002936.1 transcript:ENSPMAT00000003213.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.521 bits (114), Expect = 5.800e-7 Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWAR 875 QTN+ NNNKFY+IQLL+D + VWMRW R Sbjct: 106 QTNVGLNNNKFYLIQLLRDNDIKSFSVWMRWGR 138
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Nematostella
Match: EDO26345 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TC91]) HSP 1 Score: 133.265 bits (334), Expect = 4.547e-35 Identity = 66/134 (49.25%), Postives = 94/134 (70.15%), Query Frame = 1 Query: 1003 FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 F DKTKNDW+DR F K+ GKYDL+ +DY +E E + + K ESKL+ ++++L+ ++ +++ M +A+ EMKYD K PLG+LT QIKAGY AL++IE +S+G NK LV+AC+ +YTRIPH FG Sbjct: 1 FSDKTKNDWEDRASFTKVQGKYDLLIMDYKAEENDEVDAPVKEEKPAKPESKLDCRVRELVELICNVQAMEEALKEMKYDTKKAPLGKLTTDQIKAGYEALKKIESCISKGDYGNK-LVKACDEFYTRIPHCFG 133
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Nematostella
Match: EDO46480 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQ13]) HSP 1 Score: 88.9669 bits (219), Expect = 8.002e-29 Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRI 1389 K+F DKTKNDW+DR F K+ GKYDL+ +DY +E E + + K ESKL+ ++++L+ ++ +++ M +A+ EMKYD K PLG +E + + LR ++ S+ C+++ TR+ Sbjct: 92 TFEKKFSDKTKNDWEDRASFTKVQGKYDLLIMDYKAEENDEVDAPVKEEKPAKPESKLDCRVRELVELICNVQAMEEALKEMKYDTKKAPLGSFSEYHVCHYTIQLRMTGRIVPVSPRCKGSMT--CSSWITRL 223 HSP 2 Score: 57.7658 bits (138), Expect = 8.002e-29 Identity = 29/53 (54.72%), Postives = 32/53 (60.38%), Query Frame = 3 Query: 804 KFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKKLSS 962 K+Y+IQLL+D YY WMRW RVG GQ L F NL AAK F KK S Sbjct: 47 KYYLIQLLEDNTAKKYYTWMRWGRVGFDGQKNLQAFGANLDAAKRTFEKKFSD 99 HSP 3 Score: 66.2402 bits (160), Expect = 2.811e-11 Identity = 26/55 (47.27%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 2377 ISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHC 2541 + M+ PPL+R+ E+K +LELLE L DI++A+ ++ E D +HP D+HY++LHC Sbjct: 227 MKMKRPPLLRTNEEVKEKLELLEALGDIQVAITMLKEKVDDKMHPADKHYESLHC 281
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Nematostella
Match: EDO46812 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNW1]) HSP 1 Score: 83.5741 bits (205), Expect = 2.392e-16 Identity = 44/134 (32.84%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 1003 FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 + +KT N+W +R F K ++ ++IDY + + + +++++ +SKL ++Q+L++++FD++ M + E + D K+PLG+LT+ QI+ Y L E + +LSE +S +++ N +YT IPHDFG Sbjct: 571 YREKTGNEWSERDNFVKHPNRFYPLEIDYGQAH---EDVVKAKIEMGS-KSKLPSQIQELIKMIFDVESMKKTLIEFEIDLKKMPLGKLTKRQIEKAYSVLGEAQQILSEA-ASKTAVLDVSNRFYTLIPHDFG 699
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Nematostella
Match: EDO29976 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T240]) HSP 1 Score: 36.5798 bits (83), Expect = 5.376e-7 Identity = 17/49 (34.69%), Postives = 29/49 (59.18%), Query Frame = 3 Query: 792 FNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKE 938 F N FY +Q++ ++ + ++ + RW R+G GQ +LT F + AA E Sbjct: 103 FGLNNFYKMQVIFEKGKNLWVLLTRWGRIGDRGQHQLTPFSDAKAATDE 151 HSP 2 Score: 36.1946 bits (82), Expect = 5.376e-7 Identity = 35/115 (30.43%), Postives = 53/115 (46.09%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLV------QIDYCK-KEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSE--MKYDNNKVPLGRLTEAQIKAGYLALREI 1314 K F KT N W ++ F K KY LV Q + K K+IL+ + + SKL + LQ LM+ + D + + +VS ++ D +P GRL+ I L +I Sbjct: 154 KIFRSKTGNLWDEKGSFVKHPKKYSLVLPERNPQFHHRKPKDILKPFDLEACP-----PSKLPKPLQTLMKAITDQEWLRKSVSHHSLQVDPEFMPFGRLSLETINRARGVLEKI 263
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Match: parp2 (poly(ADP-ribose) polymerase 2 [Source:NCBI gene;Acc:101165670]) HSP 1 Score: 135.576 bits (340), Expect = 5.287e-48 Identity = 66/136 (48.53%), Postives = 92/136 (67.65%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F+DKT+N+W+ R F K+ GKYD+V +DY E +ET +K + S L+ K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY AL++IE L SS + L++ACN +YTRIPHDFG Sbjct: 127 KKFFDKTRNEWEQRGSFVKVAGKYDMVFMDYSTNEKVETKTRVLSLK---VFSSLDPKVQSLLELICDLKAMEECVLEMKFDTRKAPLGKLTSEQIRAGYAALKKIEECLKRKGSS-RDLLEACNQFYTRIPHDFG 258 HSP 2 Score: 77.0258 bits (188), Expect = 5.287e-48 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 TNLQFNNNKFY+IQLL+D+ + VWMRW RVGK+GQ LT +L AK+ F KK Sbjct: 70 STNLQFNNNKFYLIQLLQDDSSKSFSVWMRWGRVGKVGQNSLTACGGDLLKAKDIFKKK 128 HSP 3 Score: 68.5514 bits (166), Expect = 1.895e-11 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PP+I + +E+K ++ LLE LSDI+IA+K++ + D HPLDRHY +L C NL +D+ + ++ Y Sbjct: 255 HDFGLRPPPVIHTDAELKEKISLLEALSDIQIAVKMVQSSADSEEHPLDRHYHSLKC--NLQPLDSTSSEFKVIEKYL 330
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Match: parp2 (poly(ADP-ribose) polymerase 2 [Source:NCBI gene;Acc:101165670]) HSP 1 Score: 131.724 bits (330), Expect = 1.738e-47 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F+DKT+N+W+ R F K+ GKYD+V +DY E E N KL+ K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY AL++IE L SS + L++ACN +YTRIPHDFG Sbjct: 236 KKFFDKTRNEWEQRGSFVKVAGKYDMVFMDYSTNEK-EENTTVVDAATNKRSCKLDPKVQSLLELICDLKAMEECVLEMKFDTRKAPLGKLTSEQIRAGYAALKKIEECLKRKGSS-RDLLEACNQFYTRIPHDFG 369 HSP 2 Score: 78.9518 bits (193), Expect = 1.738e-47 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFY+IQLL+D+ + VWMRW RVGK+GQ LT +L AK+ F KK Sbjct: 179 QTNLQFNNNKFYLIQLLQDDSSKSFSVWMRWGRVGKVGQNSLTACGGDLLKAKDIFKKK 237 HSP 3 Score: 68.5514 bits (166), Expect = 1.833e-11 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PP+I + +E+K ++ LLE LSDI+IA+K++ + D HPLDRHY +L C NL +D+ + ++ Y Sbjct: 366 HDFGLRPPPVIHTDAELKEKISLLEALSDIQIAVKMVQSSADSEEHPLDRHYHSLKC--NLQPLDSTSSEFKVIEKYL 441
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Match: parp2 (poly(ADP-ribose) polymerase 2 [Source:NCBI gene;Acc:101165670]) HSP 1 Score: 131.724 bits (330), Expect = 1.782e-47 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F+DKT+N+W+ R F K+ GKYD+V +DY E E N KL+ K+Q L+ ++ DLK M + V EMK+D K PLG+LT QI+AGY AL++IE L SS + L++ACN +YTRIPHDFG Sbjct: 236 KKFFDKTRNEWEQRGSFVKVAGKYDMVFMDYSTNEK-EENTTVVDAATNKRSCKLDPKVQSLLELICDLKAMEECVLEMKFDTRKAPLGKLTSEQIRAGYAALKKIEECLKRKGSS-RDLLEACNQFYTRIPHDFG 369 HSP 2 Score: 78.9518 bits (193), Expect = 1.782e-47 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFY+IQLL+D+ + VWMRW RVGK+GQ LT +L AK+ F KK Sbjct: 179 QTNLQFNNNKFYLIQLLQDDSSKSFSVWMRWGRVGKVGQNSLTACGGDLLKAKDIFKKK 237 HSP 3 Score: 69.3218 bits (168), Expect = 1.099e-11 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQVNFLKNYF 2604 H +R PP+I + +E+K ++ LLE LSDI+IA+K++ + D HPLDRHY +L C NL +D+ + ++ Y Sbjct: 366 HDFGLRPPPVIHTDAELKEKISLLEALSDIQIAVKMVQSSADSEEHPLDRHYHSLKC--NLQPLDSTSSEFKVIEKYL 441
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Match: parp3 (poly(ADP-ribose) polymerase family member 3 [Source:NCBI gene;Acc:101172069]) HSP 1 Score: 71.2478 bits (173), Expect = 1.667e-22 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 1015 TKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKI---ASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 TKNDW +R F GKY L++++ + ++ + + A +V + L+E Q L+ ++F +A+ M D K+PLG+L++ QI G+ L EIE L++ + + L + + ++T IPH+FG Sbjct: 128 TKNDWSNRSNFVTHPGKYTLIEVEGEQDAEVKVDSVDGKAVKVPKNTLPCTLDEATQKLITLIFSNDMFKEAMECMDLDIKKMPLGKLSKVQIAKGFEVLEEIEAALNKPNQRH-LLEELSSKFFTTIPHNFG 259 HSP 2 Score: 55.8398 bits (133), Expect = 1.667e-22 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRF 911 QTN+ NNNKFY+IQ++++ K +Y W RW RVG++GQ KL F Sbjct: 68 QTNIGHNNNKFYVIQVVQENKR--FYSWNRWGRVGEVGQNKLNSF 110
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Match: parp1 (poly(ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:101157338]) HSP 1 Score: 73.1738 bits (178), Expect = 2.018e-17 Identity = 45/139 (32.37%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 988 NLSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 N + +KT N+W F K K+ ++IDY + E AS +SKL + +Q+L++++FD++ M A+ E + D K+PLG+L++ QI++ Y L E++ +S+ ++ N +YT IPHDFG Sbjct: 614 NFLSVYKEKTGNEW-GSSNFIKYPTKFYPLEIDYGQDEEAVKRLTASA----GTKSKLPKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQAVSD-CVPEAQILDLSNRFYTLIPHDFG 746 HSP 2 Score: 36.5798 bits (83), Expect = 2.018e-17 Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = 3 Query: 795 NNNKFYIIQLLKDEKEPIYYVWMRWARVG-KIGQMKLTRFYNNLAA 929 N +Y +QLL+D+ + Y+V+ W RVG IG KL +F++ +A Sbjct: 566 GTNSYYKLQLLEDDLQKRYWVFRSWGRVGTTIGGNKLDKFHDKNSA 611
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Match: SMESG000060010.1 (SMESG000060010.1) HSP 1 Score: 283.878 bits (725), Expect = 2.735e-108 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG Sbjct: 354 KKFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 489 HSP 2 Score: 129.798 bits (325), Expect = 2.735e-108 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK Sbjct: 297 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 355 HSP 3 Score: 143.28 bits (360), Expect = 5.297e-35 Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 2353 NDYIT--GHFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ 2580 N Y T H MRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ Sbjct: 478 NTYYTRIPHDFGMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ 555
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Match: SMESG000060010.1 (SMESG000060010.1) HSP 1 Score: 283.878 bits (725), Expect = 2.736e-108 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG Sbjct: 328 KKFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 463 HSP 2 Score: 129.798 bits (325), Expect = 2.736e-108 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK Sbjct: 271 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 329 HSP 3 Score: 143.665 bits (361), Expect = 4.123e-35 Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 2353 NDYIT--GHFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ 2580 N Y T H MRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ Sbjct: 452 NTYYTRIPHDFGMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ 529
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Match: SMESG000067451.1 (SMESG000067451.1) HSP 1 Score: 283.493 bits (724), Expect = 3.073e-108 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG Sbjct: 353 KKFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 488 HSP 2 Score: 129.798 bits (325), Expect = 3.073e-108 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK Sbjct: 296 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 354 HSP 3 Score: 138.272 bits (347), Expect = 2.229e-33 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H MRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ+ Sbjct: 485 HDFGMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQL 555
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Match: SMESG000067451.1 (SMESG000067451.1) HSP 1 Score: 283.493 bits (724), Expect = 3.231e-108 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1 Query: 997 KRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+FYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG Sbjct: 327 KKFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 462 HSP 2 Score: 129.798 bits (325), Expect = 3.231e-108 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK Sbjct: 270 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 328 HSP 3 Score: 138.272 bits (347), Expect = 1.989e-33 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 1 Query: 2371 HFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQV 2583 H MRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQ+ Sbjct: 459 HDFGMRIPPLIRSISEIKRELELLETLSDIKIALKLINENEDVHVHPLDRHYQNLHCIINLVTIDNPIYQL 529
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Match: SMESG000011115.1 (SMESG000011115.1) HSP 1 Score: 82.4185 bits (202), Expect = 2.042e-23 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 991 LSKRFYDKTKNDWQDRQKFEKINGKYDLVQIDYCKKEILETNKIASQVKLEPIESKLEEKLQDLMRIVFDLKEMNDAVSEMKYDNNKVPLGRLTEAQIKAGYLALREIEGLLSEGHSSNKSLVQACNTYYTRIPHDFG 1404 K+F DKTKN W +R F+ + E+L TN AS+ K P SKL ++ Q L+ ++F N A++++K D K+PLG+L++ QI G+ L E++ +S+ + L++ + +YT IPHDFG Sbjct: 120 FDKKFQDKTKNHWDNRDNFKSDEDE---------TSEVLVTNSDASE-KFSP--SKLAKETQFLVDLIFQTDMFNHALAQLKLDTKKLPLGKLSKPQIMKGFEVLEELQNEISKNNEKTAKLLELSSKFYTIIPHDFG 245 HSP 2 Score: 46.9802 bits (110), Expect = 2.042e-23 Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 3 Query: 777 QTNLQFNNNKFYIIQLLKDEKEPIYYVWMRWARVGKIGQMKLTRFYNNLAAAKECFMKK 953 QTN+ NNNK+Y+IQ+++ + Y+VW RW RVG+ G YN A + F KK Sbjct: 67 QTNIDGNNNKYYVIQMIQYNGK--YFVWTRWGRVGENGATLKLGPYNTKEDAHKQFDKK 123 The following BLAST results are available for this feature:
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 4
BLAST of Poly [ADP-ribose] polymerase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Poly [ADP-ribose] polymerase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020704 ID=SMED30020704|Name=Poly [ADP-ribose] polymerase|organism=Schmidtea mediterranea sexual|type=transcript|length=2724bpback to top protein sequence of SMED30020704-orf-1 >SMED30020704-orf-1 ID=SMED30020704-orf-1|Name=SMED30020704-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=106bp MNSFINDYITGHFISMRIPPLIRSISEIKRELELLETLSDIKIALKLINEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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