Long-chain specific acyl-CoA dehydrogenase

Overview


Name	Long-chain specific acyl-CoA dehydrogenase
Smed ID	SMED30020701
Length (bp)	2885

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Long-chain specific acyl-CoA dehydrogenase (SMED30020701) t-SNE clustered cells

Violin plots show distribution of expression levels for Long-chain specific acyl-CoA dehydrogenase (SMED30020701) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Long-chain specific acyl-CoA dehydrogenase (SMED30020701) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30020701

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 31

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pigment cell	SMED30020701		SmedASXL_018089	SmedAsxl_ww_GCZZ01	PMID:29158443 He et al., 2017
nervous system	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30020701	h1SMcG0000345	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30020701	h1SMcG0020787	dd_Smed_v4_129_2_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30020701		SMED30032823	smed_20140614	PMID:26457503 Tu et al., 2015
parenchyma	SMED30020701		SMED30032823	smed_20140614	PMID:26457503 Tu et al., 2015
neuron	SMED30020701	h1SMcG0000345	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
cholinergic neuron	SMED30020701	h1SMcG0000345	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
GABAergic neuron	SMED30020701	h1SMcG0000345	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
pigment cell	SMED30020701	h1SMcG0000345	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
parenchymal cell	SMED30020701	h1SMcG0000345	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
neuron	SMED30020701	h1SMcG0020787	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
cholinergic neuron	SMED30020701	h1SMcG0020787	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
GABAergic neuron	SMED30020701	h1SMcG0020787	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
pigment cell	SMED30020701	h1SMcG0020787	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
parenchymal cell	SMED30020701	h1SMcG0020787	dd_Smed_v6_129_2	dd_Smed_v6	PMID:29674432 Plass et al., 2018
oocyte	SMED30020701	h1SMcG0000118	Contig55788	newmark_ests	PMID:28434803 Rouhana et al., 2017
oocyte	SMED30020701	h1SMcG0000118	Contig55788	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30020701	h1SMcG0000118	Contig55788	newmark_ests	PMID:28434803 Rouhana et al., 2017
vitelline gland	SMED30020701	h1SMcG0000118	Contig55788	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Match: ACADL (acyl-CoA dehydrogenase long chain [Source:HGNC Symbol;Acc:HGNC:88])

HSP 1 Score: 160.999 bits (406), Expect = 6.855e-42
Identity = 70/104 (67.31%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD+CL L  + +LD+ TA MAKY+ S+L N + YD VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HLQTVQHKLAELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIVFD 429

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Match: ACAD8 (acyl-CoA dehydrogenase family member 8 [Source:HGNC Symbol;Acc:HGNC:87])

HSP 1 Score: 74.7146 bits (182), Expect = 7.375e-14
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q  LA+M T +  +R  V +  + L   + D     SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D+RV  I  G+NE+M+ LI+RS++++
Sbjct:  186 QYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE 288

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Match: ACAD8 (acyl-CoA dehydrogenase family member 8 [Source:HGNC Symbol;Acc:HGNC:87])

HSP 1 Score: 74.7146 bits (182), Expect = 2.896e-13
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q  LA+M T +  +R  V +  + L   + D     SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D+RV  I  G+NE+M+ LI+RS++++
Sbjct:  313 QYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQE 415

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Match: ACADSB (acyl-CoA dehydrogenase short/branched chain [Source:HGNC Symbol;Acc:HGNC:91])

HSP 1 Score: 71.633 bits (174), Expect = 1.417e-12
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSI 2760
            FQ +QH++A + T +  +R    +   LL + K   + ASMAKYY S++  +     ++  GG GY  DYPV K + DA++ +IY GA+ I    IA+ I
Sbjct:  227 FQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 326

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Match: ACADSB (acyl-CoA dehydrogenase short/branched chain [Source:HGNC Symbol;Acc:HGNC:91])

HSP 1 Score: 71.2478 bits (173), Expect = 3.207e-12
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSI 2760
            FQ +QH++A + T +  +R    +   LL + K   + ASMAKYY S++  +     ++  GG GY  DYPV K + DA++ +IY GA+ I    IA+ I
Sbjct:  329 FQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHI 428

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
Match: acdh-9 (Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;Acc:Q95YB2])

HSP 1 Score: 62.7734 bits (151), Expect = 5.935e-10
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLL-NSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
            FQ  Q KLAE+ T +  SR  V +    L N +       +MAK + +D    +   A+Q+ GG+G++ DYPV +   D RV  I  G NE+M+ LI+R ++
Sbjct:  300 FQYNQFKLAELATKLYTSRLIVRNAAEQLDNDDPEKVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLISRDLL 401

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
Match: ivd-1 (Isovaleryl-CoA dehydrogenase [Source:UniProtKB/TrEMBL;Acc:G5EEH6])

HSP 1 Score: 61.2326 bits (147), Expect = 1.973e-9
Identity = 31/103 (30.10%), Postives = 57/103 (55.34%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ +Q KLA+M T +  SRS++       +   +  +  +    Y ++   ++C DA+Q+ GG GY+ DYP  +   DA++  I  G +E+ + +I R++ K+
Sbjct:  314 FQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKE 416

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Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ +Q KLA+M T +  SRS++       +   +  +  +    Y ++   ++C DA+Q+ GG GY+ DYP  +   DA++  I  G +E+ + +I R++ K+
Sbjct:  314 FQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTSEVRRLIIGRALNKE 416

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
Match: acdh-8 (Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;Acc:Q21243])

HSP 1 Score: 58.151 bits (139), Expect = 1.658e-8
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q  +A+M   +  SR F       ++S  + +  AS+AK + +D  N    +A Q+ GG G+  +YPV K   DA++  IY G ++I + +I R++ ++
Sbjct:  301 QGVQFMIADMAINLELSRLFTYRAAAEVDSYGVSSYNASIAKCFAADTANVAATNACQIFGGAGFNCEYPVEKLMRDAKIYQIYEGTSQIQRMVIGRTLFQN 402

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
Match: acdh-7 (Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;Acc:Q22781])

HSP 1 Score: 56.225 bits (134), Expect = 8.119e-8
Identity = 31/100 (31.00%), Postives = 53/100 (53.00%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
            Q +   LAEM      +R         +++ +  +  AS+AK + SD  N+   +AVQ+ GG G+  +YP  K   DA++  IY G ++I + +IAR ++
Sbjct:  304 QGVSFLLAEMAINCELARLMTYKSGAEVDAGRPGSYYASIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYEGTSQIQRMVIARQLL 403

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Match: Mcad (gene:FBgn0035811 transcript:FBtr0076808)

HSP 1 Score: 64.3142 bits (155), Expect = 2.543e-10
Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSI 2760
            Y Q +Q  LA+M   +  SR         ++  + ++  AS+AK + +D+ NKI  DAVQ+ GG G+  +YPV K   DA++  IY G ++I + +I+R++
Sbjct:  311 YHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNM 411

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Match: CG4860 (gene:FBgn0037999 transcript:FBtr0082623)

HSP 1 Score: 61.6178 bits (148), Expect = 1.834e-9
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q IQ KLA+M T +  SR        L ++    T+ A+MAK + S+      +  +Q+ GG GY  D P    Y +ARV  IY G +EI + +IA +++++
Sbjct:  309 LQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Match: Arc42 (gene:FBgn0038742 transcript:FBtr0083817)

HSP 1 Score: 61.6178 bits (148), Expect = 1.983e-9
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q+IQ K+A+M  A+  +R        L +  +  T+ A+MAK   S+      +  +Q+ GG GY+ D    + Y DAR+  IY G +EI + +IA SI+K+
Sbjct:  300 LQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKE 402

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Match: CG3902 (gene:FBgn0036824 transcript:FBtr0075076)

HSP 1 Score: 60.077 bits (144), Expect = 4.873e-9
Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQ------TASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ++QH++A + T I  +R      L+  N+ +L  Q       A+MAKYY S++  +     V   GG G+  D+P  K Y D ++ +IY G   +    IA+ I KD
Sbjct:  309 FQSMQHQIATVATEIEAAR------LMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKD 411

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Match: CG6638 (gene:FBgn0035911 transcript:FBtr0076651)

HSP 1 Score: 53.5286 bits (127), Expect = 5.896e-7
Identity = 29/103 (28.16%), Postives = 54/103 (52.43%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ +Q K+A+M T +   RS++       ++     +  +    YT++   K+  DA+Q+ GG GY+ + P  +   DA++  I  G +EI + LI R + ++
Sbjct:  316 FQLLQGKMADMYTTLSACRSYLYTVARSCDAGNRSPKDCAGVILYTAEKATKVALDAIQILGGNGYINENPTGRILRDAKLYEIGAGTSEIRRWLIGRQLNQE 418

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Zebrafish
Match: acadl (acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771])

HSP 1 Score: 150.214 bits (378), Expect = 2.286e-38
Identity = 63/101 (62.38%), Postives = 80/101 (79.21%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
             Q +QHKLAE+KT IC  R+F+D CL L +  KLD+ TASMAKY+ +DL N++    +QLHGGWGYMW+YP+ K++ DARVQ IYGG NEIMKELI+R+IV
Sbjct:  339 LQVVQHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIMKELISRNIV 439

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Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
             Q +QHKLAE+KT IC  R+F+D CL L +  KLD+ TASMAKY+ +DL N++    +QLHGGWGYMW+YP+ K++ DARVQ IYGG NEIMKELI+R+IV
Sbjct:  339 LQVVQHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIMKELISRNIV 439

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Zebrafish
Match: acad8 (acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828])

HSP 1 Score: 79.7221 bits (195), Expect = 4.113e-15
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQT-ASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q KLAEM T +  SR  V    L L   + D  +  SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G NE+M+ +IARS++ +
Sbjct:  315 QFLQFKLAEMATKLVASRLLVRQAALALQDGRPDAVSLCSMAKLFVTDECFSICNQALQIHGGYGYLKDYAVQQYVRDIRVHQILEGTNEVMRMIIARSLLTE 417

[Close]

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQT-ASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q KLAEM T +  SR  V    L L   + D  +  SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G NE+M+ +IARS++ +
Sbjct:  315 QFLQFKLAEMATKLVASRLLVRQAALALQDGRPDAVSLCSMAKLFVTDECFSICNQALQIHGGYGYLKDYAVQQYVRDIRVHQILEGTNEVMRMIIARSLLTE 417

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BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Zebrafish
Match: acads (acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64])

HSP 1 Score: 73.9442 bits (180), Expect = 2.391e-13
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q IQ KLA+M  AI  +R       LL ++ K  T+ A+MAK   S+      + A+Q+ GG GY+ D P  + Y DAR+  IY G +EI + +IA +I+K+
Sbjct:  300 LQAIQFKLADMAVAIESARLLTWKAALLRDAKKPFTKEAAMAKLAASEAATFASHQAIQVLGGMGYVTDMPAERHYRDARITEIYEGTSEIQRLVIANNILKE 402

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Match: ppp3r1 (protein phosphatase 3 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-948794])

HSP 1 Score: 157.147 bits (396), Expect = 8.026e-41
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC  R+F+D+CL L    +LD+ TASMAKY+ SDL N +    VQLHGGWGYMW+YP+ K+YVD+RVQ IYGG NEIMKELIAR IVK+
Sbjct:  300 HLQTVQHKLAELKTQICIGRTFLDNCLQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDIVKE 403

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Match: ppp3r1 (protein phosphatase 3 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-948794])

HSP 1 Score: 156.762 bits (395), Expect = 9.887e-41
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC  R+F+D+CL L    +LD+ TASMAKY+ SDL N +    VQLHGGWGYMW+YP+ K+YVD+RVQ IYGG NEIMKELIAR IVK+
Sbjct:  305 HLQTVQHKLAELKTQICIGRTFLDNCLQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDIVKE 408

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Match: ppp3r1 (protein phosphatase 3 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-948794])

HSP 1 Score: 157.532 bits (397), Expect = 1.239e-40
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC  R+F+D+CL L    +LD+ TASMAKY+ SDL N +    VQLHGGWGYMW+YP+ K+YVD+RVQ IYGG NEIMKELIAR IVK+
Sbjct:  340 HLQTVQHKLAELKTQICIGRTFLDNCLQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDIVKE 443

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Match: ppp3r1 (protein phosphatase 3 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-948794])

HSP 1 Score: 156.762 bits (395), Expect = 1.517e-40
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC  R+F+D+CL L    +LD+ TASMAKY+ SDL N +    VQLHGGWGYMW+YP+ K+YVD+RVQ IYGG NEIMKELIAR IVK+
Sbjct:  320 HLQTVQHKLAELKTQICIGRTFLDNCLQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDIVKE 423

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Match: ppp3r1 (protein phosphatase 3 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-948794])

HSP 1 Score: 156.377 bits (394), Expect = 2.592e-40
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC  R+F+D+CL L    +LD+ TASMAKY+ SDL N +    VQLHGGWGYMW+YP+ K+YVD+RVQ IYGG NEIMKELIAR IVK+
Sbjct:  328 HLQTVQHKLAELKTQICIGRTFLDNCLQLHAEKRLDSATASMAKYWASDLQNSVATQCVQLHGGWGYMWEYPIAKAYVDSRVQPIYGGTNEIMKELIARDIVKE 431

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Match: Acadl (acyl-Coenzyme A dehydrogenase, long-chain [Source:MGI Symbol;Acc:MGI:87866])

HSP 1 Score: 160.999 bits (406), Expect = 4.841e-42
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD CL L  + +LD+ +ASMAKY+ S+L N + Y+ VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HIQTVQHKLAELKTHICVTRAFVDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVSD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Match: Acad8 (acyl-Coenzyme A dehydrogenase family, member 8 [Source:MGI Symbol;Acc:MGI:1914198])

HSP 1 Score: 74.7146 bits (182), Expect = 1.880e-13
Identity = 38/103 (36.89%), Postives = 62/103 (60.19%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q +LA+M T +  SR  +    + L   + D     SMAK + ++    IC  A+Q+HGG+GY+ DY V +   D+RV  I  G+NE+M+ LI+R++++D
Sbjct:  311 QYLQFQLADMATKLVASRLMIRTAAVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQD 413

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Match: Acad8 (acyl-Coenzyme A dehydrogenase family, member 8 [Source:MGI Symbol;Acc:MGI:1914198])

HSP 1 Score: 74.7146 bits (182), Expect = 1.930e-13
Identity = 38/103 (36.89%), Postives = 62/103 (60.19%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q +LA+M T +  SR  +    + L   + D     SMAK + ++    IC  A+Q+HGG+GY+ DY V +   D+RV  I  G+NE+M+ LI+R++++D
Sbjct:  311 QYLQFQLADMATKLVASRLMIRTAAVALQEEREDAVALCSMAKLFATEECFAICNQALQMHGGYGYLKDYAVQQYMRDSRVHQILEGSNEVMRMLISRNLLQD 413

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Match: Acadsb (acyl-Coenzyme A dehydrogenase, short/branched chain [Source:MGI Symbol;Acc:MGI:1914135])

HSP 1 Score: 68.1662 bits (165), Expect = 2.209e-11
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSI 2760
            FQ +QH++A++ T +  +R    +   L+ + +   + ASMAKYY S++        ++  GG GY  DYPV K + DA++ +IY GA+ I    IA+ I
Sbjct:  329 FQGLQHQVAQVATQLEATRLLTYNAARLVEAGRPFIKEASMAKYYASEVAGLTTSKCIEWMGGVGYTKDYPVEKFFRDAKIGTIYEGASNIQLNTIAKHI 428

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Match: Acads (acyl-Coenzyme A dehydrogenase, short chain [Source:MGI Symbol;Acc:MGI:87868])

HSP 1 Score: 67.0106 bits (162), Expect = 5.441e-11
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVK 2766
             Q IQ KLA+M  A+  +R       +L ++ K  T+ ++MAK   S+    I + A+Q+ GG GY+ + P  + Y DAR+  IY G +EI + +IA  +++
Sbjct:  307 LQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLLR 408

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Match: sp|P51174|ACADL_MOUSE (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 2.939e-41
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD CL L  + +LD+ +ASMAKY+ S+L N + Y+ VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HIQTVQHKLAELKTHICVTRAFVDSCLQLHETKRLDSGSASMAKYWASELQNSVAYECVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVSD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Match: sp|P28330|ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ACADL PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.292e-41
Identity = 70/104 (67.31%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD+CL L  + +LD+ TA MAKY+ S+L N + YD VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HLQTVQHKLAELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIVFD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Match: sp|Q60HI0|ACADL_MACFA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis OX=9541 GN=ACADL PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 5.750e-41
Identity = 70/104 (67.31%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD+CL L  + +LD+ TA MAKY+ S+L N + YD VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HLQTVQHKLAELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIVFD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Match: sp|P15650|ACADL_RAT (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.562e-41
Identity = 69/104 (66.35%), Postives = 84/104 (80.77%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD CL L  + +LD+ +ASMAKY+ S+L N + Y  VQLHGGWGYMW+YP+ K+YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HIQTVQHKLAELKTNICVTRAFVDSCLQLHETKRLDSASASMAKYWASELQNTVAYQCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVSD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Match: sp|P79274|ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=ACADL PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.103e-40
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QT+QHKLAE+KT IC +R+FVD CL L  + +L++  ASMAKY+ S+L N + YD VQLHGGWGYMW+YP+ ++YVDARVQ IYGG NEIMKELIAR IV D
Sbjct:  326 HIQTVQHKLAELKTHICVTRAFVDSCLQLHETKRLESAAASMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIARAYVDARVQPIYGGTNEIMKELIAREIVHD 429

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Match: A0A183APB8 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS8803 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.007e-45
Identity = 76/103 (73.79%), Postives = 90/103 (87.38%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QT+QH+LAEMKT+IC SR+FVD CL LLN  +LD+  ASMAKY+ SDL N++ +D VQLHGGWGYMWDY VCK+YVD+RVQSIYGG+NEIMKELIARSI+KD
Sbjct:  186 LQTVQHRLAEMKTSICVSRAFVDQCLELLNQGRLDSSMASMAKYWASDLFNRVAHDGVQLHGGWGYMWDYAVCKAYVDSRVQSIYGGSNEIMKELIARSIMKD 288

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Match: A0A1S8X7M8 (Acyl-CoA dehydrogenase protein (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_01361 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.806e-44
Identity = 75/101 (74.26%), Postives = 88/101 (87.13%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
             QT+QHKLAEMKT +C SR+FVD CL LLN  +LDT+ ASMAKY+ SD+ N++ YD VQLHGGWGYMW+YPVCKS+VDAR+Q+IYGG NEIMKELIARSIV
Sbjct:  243 LQTVQHKLAEMKTKLCVSRAFVDQCLELLNQGRLDTEMASMAKYWASDVANQVAYDGVQLHGGWGYMWEYPVCKSFVDARLQTIYGGTNEIMKELIARSIV 343

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Match: G7YI21 (Long-chain-acyl-CoA dehydrogenase OS=Clonorchis sinensis OX=79923 GN=CLF_108434 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.823e-44
Identity = 74/101 (73.27%), Postives = 88/101 (87.13%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
             QT+QHKLAEMKT +C SR+FVD CL LLN  +LDT+ ASMAKY+ SD+ N++ YD VQLHGGWGYMW+YPVCKS+VDAR+Q+IYGG NEIMKELIARSI+
Sbjct:  186 LQTVQHKLAEMKTNLCVSRAFVDQCLDLLNQGRLDTEMASMAKYWASDVANQVAYDGVQLHGGWGYMWEYPVCKSFVDARLQTIYGGTNEIMKELIARSIL 286

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Match: A0A2H1CS32 (Acyl-CoA dehydrogenase protein (Fragment) OS=Fasciola hepatica OX=6192 GN=D915_02858 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.971e-44
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            + QTIQH+LAEMKT+IC SR+FVD CL LLN   LD+  ASMAKY+ SDL N+I YD VQLHGGWGYMW+Y VCK+YVDARVQSIYGG+NEIMKELI RSIVK+
Sbjct:  238 HLQTIQHRLAEMKTSICVSRAFVDQCLNLLNQGNLDSGMASMAKYWASDLYNRIAYDGVQLHGGWGYMWEYAVCKAYVDARVQSIYGGSNEIMKELIGRSIVKE 341

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Match: A0A075A9Z1 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_01445 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.395e-43
Identity = 75/101 (74.26%), Postives = 88/101 (87.13%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
             QT+QHKLAEMKT +C SR+FVD CL LLN  +LDT+ ASMAKY+ SD+ N++ YD VQLHGGWGYMW+YPVCKS+VDAR+Q+IYGG NEIMKELIARSIV
Sbjct:  266 LQTVQHKLAEMKTKLCVSRAFVDQCLELLNQGRLDTEMASMAKYWASDVANQVAYDGVQLHGGWGYMWEYPVCKSFVDARLQTIYGGTNEIMKELIARSIV 366

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Match: acadl (acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:111197552])

HSP 1 Score: 154.451 bits (389), Expect = 7.956e-40
Identity = 66/100 (66.00%), Postives = 81/100 (81.00%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
            QT+QHKLAE+KT IC  RSF+D+CL L +  KLD+ TASMAK++ SDL N++    +QLHGGWGYMW+YP+ K++ DARVQ IYGG NEIMKELIAR IV
Sbjct:  339 QTVQHKLAELKTEICVGRSFIDNCLQLHSEKKLDSSTASMAKFWASDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIMKELIARPIV 438

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Match: acad8 (acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:103025351])

HSP 1 Score: 77.411 bits (189), Expect = 1.656e-14
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q KLAEM T +  SR  V    + L  ++ D     SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G NE+M+ +IAR+++ +
Sbjct:  278 QFLQFKLAEMATRLVASRLMVRQAAVALQEDRPDAVALCSMAKLFATDECFSICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIIARNLLTE 380

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Match: acad8 (acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:103025351])

HSP 1 Score: 77.411 bits (189), Expect = 2.049e-14
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDT-QTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q KLAEM T +  SR  V    + L  ++ D     SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G NE+M+ +IAR+++ +
Sbjct:  316 QFLQFKLAEMATRLVASRLMVRQAAVALQEDRPDAVALCSMAKLFATDECFSICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIIARNLLTE 418

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Match: acads (acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:111190888])

HSP 1 Score: 68.5514 bits (166), Expect = 1.284e-11
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q IQ KLA+M  A+  +R       +L ++ K  ++ A+MAK   S+      + A+Q+ GG GY+ D P  + Y DAR+  IY G +EI + +IA  ++K+
Sbjct:  301 MQAIQFKLADMAVALESARLLTWKASMLRDAKKPFSKEAAMAKLAASEAATFCSHQAIQVLGGMGYVTDMPAERHYRDARITEIYEGTSEIQRLVIANQVLKE 403

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Match: acadm (acyl-CoA dehydrogenase medium chain [Source:NCBI gene;Acc:103046142])

HSP 1 Score: 63.1586 bits (152), Expect = 7.859e-10
Identity = 33/98 (33.67%), Postives = 53/98 (54.08%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARS 2757
            Q +   LAEM   +  +R         ++  + +T  AS+AK Y  D+ N++  DAVQ+ GG G+  +YPV K   DA++  IY G  +I + +I+R 
Sbjct:  318 QAVSFMLAEMAMKVELARLAYQRAAWEVDDGRRNTYYASIAKAYAGDIANQVASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISRE 415

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Sea Lamprey
Match: acads (acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64])

HSP 1 Score: 68.1662 bits (165), Expect = 3.818e-12
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q IQ KL++M  A+  +R       +L ++ K  T+ A+MAK   S+    I + ++Q+ GG GY+ D P  + Y DAR+  IY G +EI + +IA  ++K+
Sbjct:  309 LQAIQFKLSDMALALESARLLTWRAAMLKDNGKNYTKEAAMAKLAASEAATFISHQSIQILGGMGYVTDMPAERHYRDARITEIYEGTSEIQRLVIANRLLKE 411

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Sea Lamprey
Match: zgc:85777 (zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210])

HSP 1 Score: 51.2174 bits (121), Expect = 7.158e-7
Identity = 30/97 (30.93%), Postives = 50/97 (51.55%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIAR 2754
            Q +  +LAE++T +   RS +   + L       T+ ASMAK     LV ++    +Q  GG G+  +  V + + D R+ SI GG +E+M  +I +
Sbjct:  265 QMVHFRLAELQTEVELLRSLLHRAVDLYVQGHDVTKLASMAKLKAGRLVRELTDACLQFWGGMGFTNEVYVSRLFRDGRLVSIGGGTDEVMLSIICK 361

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Sea Lamprey
Match: acadsb (acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109])

HSP 1 Score: 50.0618 bits (118), Expect = 1.503e-6
Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIAR 2754
            FQ +QH++A + T I  +R    +   L  +       A MAKY+TS++ +      ++  GG G+   YP+ K Y D +V ++  G + I    IA+
Sbjct:  281 FQGMQHQIAHVATQIEAARLLTYNAARLREAGLPFLTQACMAKYFTSEVASLTTSKCMEWMGGVGFTTSYPIEKYYRDCKVGTVPEGTSNIQLSTIAK 378

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Match: EDO43730 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXV6])

HSP 1 Score: 71.633 bits (174), Expect = 3.983e-15
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 1

Query: 2479 KLAEMKTAICFSRSFVDDCLLLLNSNKLDTQT-ASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
            KLAEM T +  SR  V      L+ N  +  T  +MAK + +D   +I    +QLHGG+GY+ DYPV +   D RV  I  G NEIM+ +I+R ++
Sbjct:    3 KLAEMATDLTASRLMVRHAATSLDKNAHNVATLCAMAKLFATDKCFEITNQCMQLHGGYGYLKDYPVQQYMRDTRVHQILEGTNEIMRVIISRDLL 98

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Match: EDO26860 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAV6])

HSP 1 Score: 68.9366 bits (167), Expect = 1.430e-14
Identity = 30/72 (41.67%), Postives = 49/72 (68.06%), Query Frame = 1

Query: 2545 LNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSI 2760
            LN  +   + ASM+K  ++ + + + YDA+QL GG+GYM +YP+ +   D+R+  I GG +EI+KE+IA+ I
Sbjct:    1 LNDGQYVVKEASMSKLLSTKMADSVIYDALQLLGGYGYMEEYPLARLLRDSRLGPIGGGTSEILKEIIAKMI 72

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Match: EDO26365 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TC74])

HSP 1 Score: 66.2402 bits (160), Expect = 7.316e-12
Identity = 30/103 (29.13%), Postives = 61/103 (59.22%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ ++H + E  T +   + F    +  L+  +   + A+MAK  ++ + ++  Y  +Q+ GG+GYM +YP+ +   D+R+  I GG +EI+KE++++ I+ +
Sbjct:  158 FQALRHTIVEHATDVEHCKLFNYAAVARLDKGEYVVKEATMAKLKSTKVADETIYSCLQMLGGYGYMEEYPLARLLRDSRLGPIGGGTSEILKEILSKMIIDN 260

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Match: EDO47569 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMA8])

HSP 1 Score: 60.8474 bits (146), Expect = 1.485e-9
Identity = 35/103 (33.98%), Postives = 57/103 (55.34%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QTIQ KLA++ T +  +R        + ++    T+ A+MAK   S+      + ++Q+ GG GY+ D P  + Y DAR+  IY G +EI K +IA  ++K+
Sbjct:  314 LQTIQMKLADIATQLEAARLLTWKAAAIKDAGMNYTKEAAMAKLAASEAATFAAHQSIQILGGMGYVTDMPAERHYRDARITEIYEGTSEIQKLVIAGRLLKE 416

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Match: EDO31980 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWC2])

HSP 1 Score: 55.8398 bits (133), Expect = 4.424e-8
Identity = 29/103 (28.16%), Postives = 55/103 (53.40%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            FQ +Q K+A+M T +   RS++       ++  +  +  +    YT++   ++  DA+Q  GG GY+ DYP  +   DA++  I  G +E+ + +I R+  K+
Sbjct:  318 FQMMQGKMADMYTRLNACRSYLYTVARACDAGHISNKDCAAIILYTAENATQVALDAIQCLGGNGYINDYPTGRFLRDAKLYEIGAGTSEVRRLIIGRAFNKE 420

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Match: acadl (acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:101159651])

HSP 1 Score: 155.606 bits (392), Expect = 3.298e-40
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 1

Query: 2458 YFQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIV 2763
            + QT+QHKLAE+KT IC  RSFVD+CLLLL   +LD  TASMAK++ S+L NK+    +QLHGGWGYM +YP+ K++VD+RVQ IYGG NEIMKELIARSIV
Sbjct:  338 HLQTVQHKLAELKTEICVGRSFVDNCLLLLAEKRLDPSTASMAKFWASELQNKVATQCLQLHGGWGYMLEYPIAKAFVDSRVQPIYGGTNEIMKELIARSIV 439

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Match: acad8 (acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:101168062])

HSP 1 Score: 77.0258 bits (188), Expect = 2.522e-14
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQT-ASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
            Q +Q KLAEM T +  SR  V +    L +N  D  +  SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G NE+M+ +I+R+++ +
Sbjct:  316 QYLQFKLAEMATKLVASRLLVREAAKALQTNHPDAVSLCSMAKLFVTDECFNICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEGTNEVMRMIISRNLLME 418

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Match: acads (acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:101166811])

HSP 1 Score: 71.633 bits (174), Expect = 1.235e-12
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             Q +Q KLA+M  A+  +R       LL +S +  T+ A+MAK   S+      + A+Q+ GG GY+ D P  + Y DAR+  IY G +EI + +IA  I+K+
Sbjct:  300 LQAVQFKLADMGVALESARLLTWKAALLRDSKRPFTKEAAMAKLAASEAATFCSHQAIQILGGMGYVTDMPAERHYRDARITEIYEGTSEIQRLVIAGQILKE 402

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Match: ENSORLT00000003950.2 (pep primary_assembly:ASM223467v1:17:3780367:3787251:1 gene:ENSORLG00000003172.2 transcript:ENSORLT00000003950.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 62.003 bits (149), Expect = 3.361e-10
Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARS 2757
            Q +   LAEM   +  +R         ++  + +T  AS+AK +  D+ N++  DAVQ+ GG G+  +YPV K   DA++  IY G  +I + +I+R 
Sbjct:  114 QAVSFILAEMAMKVELARMAYQRSAWEVDQGRRNTYYASIAKAFAGDIANQVATDAVQVFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISRE 211

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Match: acad8 (acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:101168062])

HSP 1 Score: 62.7734 bits (151), Expect = 9.875e-10
Identity = 36/87 (41.38%), Postives = 48/87 (55.17%), Query Frame = 1

Query: 2464 QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQT-ASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGG 2721
            Q +Q KLAEM T +  SR  V +    L +N  D  +  SMAK + +D    IC  A+Q+HGG+GY+ DY V +   D RV  I  G
Sbjct:  316 QYLQFKLAEMATKLVASRLLVREAAKALQTNHPDAVSLCSMAKLFVTDECFNICNQALQMHGGYGYLKDYAVQQFVRDIRVHQILEG 402

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Match: SMESG000081273.1 (SMESG000081273.1)

HSP 1 Score: 218.394 bits (555), Expect = 5.242e-63
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD
Sbjct:  269 LQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 371

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Match: SMESG000081273.1 (SMESG000081273.1)

HSP 1 Score: 217.624 bits (553), Expect = 7.557e-63
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD
Sbjct:  260 LQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 362

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Match: SMESG000081273.1 (SMESG000081273.1)

HSP 1 Score: 218.009 bits (554), Expect = 3.051e-62
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD
Sbjct:  326 LQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 428

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Match: SMESG000081273.1 (SMESG000081273.1)

HSP 1 Score: 217.624 bits (553), Expect = 5.396e-62
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1

Query: 2461 FQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 2769
             QTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD
Sbjct:  334 LQTIQHKLAEMKTAICFSRSFVDDCLLLLNSNKLDTQTASMAKYYTSDLVNKICYDAVQLHGGWGYMWDYPVCKSYVDARVQSIYGGANEIMKELIARSIVKD 436

[Close]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Match: SMESG000055478.1 (SMESG000055478.1)

HSP 1 Score: 136.346 bits (342), Expect = 5.728e-49
Identity = 99/169 (58.58%), Postives = 118/169 (69.82%), Query Frame = 3

Query:  501 YKKIMWLSRARDDLIIETRCQQITVSEQSAALLQIFNE-ELQARLPSRSLAQQLDIIPAHHLPSKSGNPVISQGNSPPADGT*XXXXXXXXXXXXXXXXXXXXXXLLFQANLRNDEYPESTEKQNSLPIECVV--YDFDNELIYAPIQPIFSHPTPTQITVNAIIRESP 998
            YKKI  LSRARDDLIIETR Q+IT+SEQ+AA  QIF E ELQARLPSR+L QQ++II A+HLP  + N  I+  ++ PADG    NRRHK NRNRR RQR RA N L QANLRND  PE  E Q+ +  +     +D D ++IYAP QP F H TP QIT+ +   ESP
Sbjct:   53 YKKITRLSRARDDLIIETRSQRITISEQTAAFRQIFTEKELQARLPSRNLVQQINIIQAYHLPINAENSPINYDSNIPADGILHVNRRHKSNRNRRWRQRRRAENALLQANLRNDGLPELREIQDLVSTKQATPRHDDDLDIIYAPFQPEFFHSTPAQITITSHGHESP 221

HSP 2 Score: 78.9518 bits (193), Expect = 5.728e-49
Identity = 39/51 (76.47%), Postives = 43/51 (84.31%), Query Frame = 2

Query:  347 MNLPRIPRIVPASHAVAMIQQLEKHERENFILREKYEKLKGTWLSPEATKD 499
            MNLP IPRIV A  AVAM Q+LEK + ENF+LREKYEKLKGTW SPEATK+
Sbjct:    1 MNLPSIPRIVLAPSAVAMTQRLEKLKWENFVLREKYEKLKGTWCSPEATKE 51

The following BLAST results are available for this feature:

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Zebrafish
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Sea Lamprey
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Yeast
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ACADL	6.855e-42	67.31	acyl-CoA dehydrogenase long chain [Source:HGNC Sym...	[more]
ACAD8	7.375e-14	37.86	acyl-CoA dehydrogenase family member 8 [Source:HGN...	[more]
ACAD8	2.896e-13	37.86	acyl-CoA dehydrogenase family member 8 [Source:HGN...	[more]
ACADSB	1.417e-12	37.00	acyl-CoA dehydrogenase short/branched chain [Sourc...	[more]
ACADSB	3.207e-12	37.00	acyl-CoA dehydrogenase short/branched chain [Sourc...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
acdh-9	5.935e-10	36.27	Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;A...	[more]
ivd-1	1.973e-9	30.10	Isovaleryl-CoA dehydrogenase [Source:UniProtKB/Tr...	[more]
ivd-1	1.973e-9	30.10	Isovaleryl-CoA dehydrogenase [Source:UniProtKB/Tr...	[more]
acdh-8	1.658e-8	30.39	Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;A...	[more]
acdh-7	8.119e-8	31.00	Acyl CoA DeHydrogenase [Source:UniProtKB/TrEMBL;A...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Mcad	2.543e-10	34.65	gene:FBgn0035811 transcript:FBtr0076808	[more]
CG4860	1.834e-9	33.98	gene:FBgn0037999 transcript:FBtr0082623	[more]
Arc42	1.983e-9	33.98	gene:FBgn0038742 transcript:FBtr0083817	[more]
CG3902	4.873e-9	33.03	gene:FBgn0036824 transcript:FBtr0075076	[more]
CG6638	5.896e-7	28.16	gene:FBgn0035911 transcript:FBtr0076651	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
acadl	2.286e-38	62.38	acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc...	[more]
acadl	2.286e-38	62.38	acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc...	[more]
acad8	4.113e-15	41.75	acyl-CoA dehydrogenase family, member 8 [Source:ZF...	[more]
acad8	4.113e-15	41.75	acyl-CoA dehydrogenase family, member 8 [Source:ZF...	[more]
acads	2.391e-13	38.83	acyl-CoA dehydrogenase short chain [Source:ZFIN;Ac...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ppp3r1	8.026e-41	65.38	protein phosphatase 3 regulatory subunit B, alpha ...	[more]
ppp3r1	9.887e-41	65.38	protein phosphatase 3 regulatory subunit B, alpha ...	[more]
ppp3r1	1.239e-40	65.38	protein phosphatase 3 regulatory subunit B, alpha ...	[more]
ppp3r1	1.517e-40	65.38	protein phosphatase 3 regulatory subunit B, alpha ...	[more]
ppp3r1	2.592e-40	65.38	protein phosphatase 3 regulatory subunit B, alpha ...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Acadl	4.841e-42	66.35	acyl-Coenzyme A dehydrogenase, long-chain [Source:...	[more]
Acad8	1.880e-13	36.89	acyl-Coenzyme A dehydrogenase family, member 8 [So...	[more]
Acad8	1.930e-13	36.89	acyl-Coenzyme A dehydrogenase family, member 8 [So...	[more]
Acadsb	2.209e-11	35.00	acyl-Coenzyme A dehydrogenase, short/branched chai...	[more]
Acads	5.441e-11	34.31	acyl-Coenzyme A dehydrogenase, short chain [Source...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P51174\|ACADL_MOUSE	2.939e-41	66.35	Long-chain specific acyl-CoA dehydrogenase, mitoch...	[more]
sp\|P28330\|ACADL_HUMAN	3.292e-41	67.31	Long-chain specific acyl-CoA dehydrogenase, mitoch...	[more]
sp\|Q60HI0\|ACADL_MACFA	5.750e-41	67.31	Long-chain specific acyl-CoA dehydrogenase, mitoch...	[more]
sp\|P15650\|ACADL_RAT	7.562e-41	66.35	Long-chain specific acyl-CoA dehydrogenase, mitoch...	[more]
sp\|P79274\|ACADL_PIG	1.103e-40	65.38	Long-chain specific acyl-CoA dehydrogenase, mitoch...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A183APB8	6.007e-45	73.79	Uncharacterized protein OS=Echinostoma caproni OX=...	[more]
A0A1S8X7M8	2.806e-44	74.26	Acyl-CoA dehydrogenase protein (Fragment) OS=Opist...	[more]
G7YI21	3.823e-44	73.27	Long-chain-acyl-CoA dehydrogenase OS=Clonorchis si...	[more]
A0A2H1CS32	6.971e-44	75.00	Acyl-CoA dehydrogenase protein (Fragment) OS=Fasci...	[more]
A0A075A9Z1	1.395e-43	74.26	Uncharacterized protein OS=Opisthorchis viverrini ...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
acadl	7.956e-40	66.00	acyl-CoA dehydrogenase long chain [Source:NCBI gen...	[more]
acad8	1.656e-14	39.81	acyl-CoA dehydrogenase family member 8 [Source:NCB...	[more]
acad8	2.049e-14	39.81	acyl-CoA dehydrogenase family member 8 [Source:NCB...	[more]
acads	1.284e-11	34.95	acyl-CoA dehydrogenase short chain [Source:NCBI ge...	[more]
acadm	7.859e-10	33.67	acyl-CoA dehydrogenase medium chain [Source:NCBI g...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3


Match Name	E-value	Identity	Description
acads	3.818e-12	34.95	acyl-CoA dehydrogenase short chain [Source:ZFIN;Ac...	[more]
zgc:85777	7.158e-7	30.93	zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]	[more]
acadsb	1.503e-6	29.59	acyl-CoA dehydrogenase short/branched chain [Sourc...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO43730	3.983e-15	40.63	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26860	1.430e-14	41.67	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26365	7.316e-12	29.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO47569	1.485e-9	33.98	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31980	4.424e-8	28.16	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
acadl	3.298e-40	66.67	acyl-CoA dehydrogenase long chain [Source:NCBI gen...	[more]
acad8	2.522e-14	39.81	acyl-CoA dehydrogenase family member 8 [Source:NCB...	[more]
acads	1.235e-12	36.89	acyl-CoA dehydrogenase short chain [Source:NCBI ge...	[more]
ENSORLT00000003950.2	3.361e-10	32.65	pep primary_assembly:ASM223467v1:17:3780367:378725...	[more]
acad8	9.875e-10	41.38	acyl-CoA dehydrogenase family member 8 [Source:NCB...	[more]

BLAST of Long-chain specific acyl-CoA dehydrogenase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000081273.1	5.242e-63	99.03	SMESG000081273.1	[more]
SMESG000081273.1	7.557e-63	99.03	SMESG000081273.1	[more]
SMESG000081273.1	3.051e-62	99.03	SMESG000081273.1	[more]
SMESG000081273.1	5.396e-62	99.03	SMESG000081273.1	[more]
SMESG000055478.1	5.728e-49	58.58	SMESG000055478.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30020701 ID=SMED30020701|Name=Long-chain specific acyl-CoA dehydrogenase|organism=Schmidtea mediterranea sexual|type=transcript|length=2885bp
TTTACCGAATTAGCAAAAGTAGAAGATAAAGCCCATGAACGATAAATCAA
TCCTTTCACCATATTTCTCTTATACTTAAATTCACAAAAGCTTTCTGGAG
AAGTATAAAGACCAGTACCAGAAACCGAAGTCTCCTCCATCCATTGTTTC
ATCTATCCGACAATTCTCGCAAAATTGGAATTTAATTGTCTTAAATTAAC
TCTAAGCAAATCGTAAGTTCTACAAAACTGCCGGATTACGTAACCGCCAA
ATTCAAATTCTCATATTAACAGTTCGGATTTTTTCTGAATTTTCATACCA
TTAACGCTAATTTTCTCTTGGGAATTACTCTGTCATTTCAATGCCAATGA
ACTTGCCGCGCATTCCCAGAATTGTTCCTGCTTCGCATGCTGTGGCTATG
ATACAACAACTAGAAAAACATGAACGTGAGAATTTCATTCTCCGAGAAAA
ATATGAGAAACTCAAGGGCACTTGGCTATCACCCGAGGCCACCAAAGACA
TATAAGAAAATCATGTGGCTCTCTCGTGCCCGAGATGATCTTATCATAGA
AACGAGATGCCAACAGATTACAGTATCCGAACAAAGCGCAGCTCTCCTAC
AGATTTTTAACGAAGAGTTGCAAGCTCGCCTACCGAGCAGGAGCTTAGCG
CAACAACTCGATATAATCCCGGCACACCATCTGCCGTCCAAGTCAGGAAA
TCCAGTAATTAGCCAGGGCAATAGTCCGCCTGCAGATGGAACATGACGGG
CCAACCGAAGGCATAAGCCCAACAGAAATCGTCGCAAGCGGCAGAGGTGT
AGGGCCAGAAACCTCCTGTTCCAGGCTAACTTGAGAAACGACGAATATCC
GGAATCAACAGAAAAACAAAACTCATTACCCATAGAATGTGTCGTTTACG
ATTTCGACAACGAACTGATCTATGCCCCCATTCAACCCATATTTTCACAT
CCCACTCCGACTCAGATAACCGTCAATGCAATCATTCGCGAGTCGCCCAC
CCACATCAATATCATTACTACTATGATAGAGGAAGAACATCAATCAAGTG
GACAGTCATCGCTACTGATCCTTTCGGTTGTAGAACCGACCGTACTTCAA
GAGCGGAGGGCAGGTTTTCCACGACAAGCATCATCCCATCCAACGACGCG
ATGTCCCAAGCGCCGTAGACATCGACGGGAACGAATAAATCAATGCCTCC
GAAAATGCCCTCGCCCGATTGACATCAGTCTATATCTCCTCTGCTAGCGA
CATTTTCCTAAAAAAACTTCACCTCCATCTTATTTTATCTTATGTTACTT
TACCTTAAGCAGAAATAACGTTTTTTTGTTTTGTTATTTAATACGGTTAA
GATTAAAATTTTAATGCAAGAGTAGTATGGGAAGTGACTTAATTCTCTTG
TTCAGTAATAAATAATTTATTAATTTTAGAAATGGTTTAATTAATTTAAA
TGAAATTGGCTGAGTAATAGGAAAAAAGGGATTGAAAATGATAATGGTTT
TCAAATTTATAGTTTTGTTCGTTTCATTAGTGTTCGATATCTTCACAGTC
AGTTCCCTTACTTAAACTTAAAGAACCAGATATATTTTTGGATTACCGAA
TTATAAGAATGCGTTAGACCTTCTAGCGGCTGCTTTGAACCCGAATCGAA
AGTTACTCGAGGAGTAGTACTGGCAACAATGCTCACCAGCTCCAATAGCA
TTCGACTATCATACACATTACCAACATTGGTAACCCATGGGTGTATGATG
GTGAGGCGTAAATTATGTTGTGTGCGATGGAAATTAGACCCTAGAAACGG
AAAGGCGTGTGGGTTTTTGTACAAGTCGGTATCCAGTGGTAACAAAGGTT
CCCAGTACACCAGCAGTTGCATAAATTGAAAATTCTGGAGGATATTTATT
TTCAAGACAAGTGAATATATTTTTATTACAAATTAATCTTAAATTCAAAA
ATTTACTAAATAATTTGAAACAAACTATCAAATACAAAACAACATACCTT
ACCAAAATGCAAAAAAAGTATGATAAATCGAATTCATTCGGAAATCACAA
TTTATCCCAAATGAAATTTAACAAAAATAATAGCAAATATTCATAATCAG
TAATTTATAATTAAATCTTTCGGTAATTATTTGTGCATAATTTAGATATT
CTTCATATCCATAAATTAAATTATAATCTTTTTTAACGGATTAGTGTATT
TGGAAGCCGGGGGATAAGTTGATAAAGGGATATGAATGTGTTTAAAAATG
AAGTAGTTGATGTTGTAGCAACCAATGGTTGCTTGAAATCGGAATATCTG
ATTTCCATTTTGACTTGAAAATTGACAATTAATATTTTGTTCAGGAAATA
TTTTTCGAGAGCATTGATATCAAATTTGTATAAGATTTTCATGGGAAAGC
TTTTAACGGTTCACCACACCCCGAAATTTAGATCAAAATTTATTGAAACT
TTGATAATATTTTCAGACAATTCAACACAAATTAGCAGAAATGAAAACCG
CAATTTGCTTTTCTAGGTCATTTGTTGATGATTGCTTGTTATTGTTGAAC
TCAAATAAATTGGATACCCAAACTGCATCTATGGCTAAATATTATACAAG
TGATCTGGTGAATAAAATTTGCTATGATGCCGTTCAGCTGCACGGTGGAT
GGGGTTACATGTGGGACTATCCGGTTTGTAAATCATATGTCGATGCTCGC
GTTCAATCAATTTATGGTGGTGCCAATGAAATAATGAAAGAATTGATTGC
AAGATCTATTGTGAAAGACTAATAATAAAAATTGACAAAACTTTTAATAA
ACTTTTTTATTTAATAAATTGCGGAAATTAATTTCATTTAAATTTTTATA
GATTTGTTAATCGTTGATTATCTTTTCAATTTTTC

protein sequence of SMED30020701-orf-1

>SMED30020701-orf-1 ID=SMED30020701-orf-1|Name=SMED30020701-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=109bp
MNVRISFSEKNMRNSRALGYHPRPPKTYKKIMWLSRARDDLIIETRCQQI
TVSEQSAALLQIFNEELQARLPSRSLAQQLDIIPAHHLPSKSGNPVISQG
NSPPADGT*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000034	epidermis
PLANA:0000074	oocyte
PLANA:0000099	neuron
PLANA:0000231	vitelline gland
PLANA:0000463	cholinergic neuron
PLANA:0000464	GABAergic neuron
PLANA:0002075	pigment cell
PLANA:0002089	reproductive organ
PLANA:0002142	parenchyma
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036250	AcylCo_DH-like_C
IPR009075	AcylCo_DH/oxidase_C
IPR006089	Acyl-CoA_DH_CS

Vocabulary: **biological process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0008152	metabolic process
GO:0042758	long-chain fatty acid catabolic process
GO:0006629	lipid metabolic process
GO:0006631	fatty acid metabolic process

Vocabulary: **molecular function**
Term	Definition
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
GO:0003995	acyl-CoA dehydrogenase activity
GO:0016491	oxidoreductase activity
GO:0050660	flavin adenine dinucleotide binding
GO:0004466	long-chain-acyl-CoA dehydrogenase activity

Vocabulary: **cellular component**
Term	Definition
GO:0005739	mitochondrion
GO:0005759	mitochondrial matrix

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.140.10		coord: 1..92 e-value: 5.7E-24 score: 86.7
None	No IPR available	PANTHER	PTHR43604	FAMILY NOT NAMED	coord: 1..92
None	No IPR available	PANTHER	PTHR43604:SF5	LONG-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL	coord: 1..92
IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	PFAM	PF00441	Acyl-CoA_dh_1	coord: 1..90 e-value: 8.3E-21 score: 74.8
IPR006089	Acyl-CoA dehydrogenase, conserved site	PROSITE	PS00073	ACYL_COA_DH_2	coord: 49..68
IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	SUPERFAMILY	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like	coord: 1..92

Main menu

Long-chain specific acyl-CoA dehydrogenase

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 31

Owlery

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