Transmembrane protein 80
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020686 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Transmembrane protein 80 vs. Ensembl Human
Match: TMEM216 (transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]) HSP 1 Score: 60.8474 bits (146), Expect = 2.904e-11 Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S P +++ +Y+A +F+ EL I KG +LPY T N ++V+LL +E R+ +G GNL ++ +++S LT P+ + + L+ QTY +E + +L FC EL+ ++L + FSR Sbjct: 16 SSTPLEILFFLNGWYNATYFLLELFIFLYKGVLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILLFFCGSELLLEVLTLAAFSR 144
BLAST of Transmembrane protein 80 vs. Ensembl Human
Match: TMEM216 (transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]) HSP 1 Score: 58.9214 bits (141), Expect = 1.904e-10 Identity = 41/131 (31.30%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P +++ +Y+A +F+ EL I KG +LPY T N ++V+LL +E R+ +G GNL ++ +++S LT P+ + + L+ QTY +E + +L FC EL+ ++L + FS + Sbjct: 16 SSTPLEILFFLNGWYNATYFLLELFIFLYKGVLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILLFFCGSELLLEVLTLAAFSSMD 146
BLAST of Transmembrane protein 80 vs. Ensembl Human
Match: TMEM216 (transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]) HSP 1 Score: 48.1358 bits (113), Expect = 3.256e-7 Identity = 24/76 (31.58%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 320 LEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 +E R+ +G GNL ++ +++S LT P+ + + L+ QTY +E + +L FC EL+ ++L + FSR Sbjct: 8 IEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILLFFCGSELLLEVLTLAAFSR 83
BLAST of Transmembrane protein 80 vs. Ensembl Human
Match: TMEM80 (transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]) HSP 1 Score: 48.9062 bits (115), Expect = 8.322e-7 Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 2 Query: 149 NNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 + + S VP Q++ + Y AL+F++ LL++ K Q+ Y ++ LL M ILE R+ G GNLTE +A S LT T + L+WQ + + A +L +E + +++ I F+R Sbjct: 28 STVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 160
BLAST of Transmembrane protein 80 vs. Ensembl Human
Match: TMEM80 (transmembrane protein 80 [Source:HGNC Symbol;Acc:HGNC:27453]) HSP 1 Score: 48.1358 bits (113), Expect = 3.090e-6 Identity = 25/79 (31.65%), Postives = 38/79 (48.10%), Query Frame = 2 Query: 311 MAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 M ILE R+ G GNLTE +A S LT T + L+WQ + + A +L +E + +++ I F+R Sbjct: 138 MGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 216
BLAST of Transmembrane protein 80 vs. Ensembl Celegans
Match: mks-2 (MecKel-Gruber Syndrome (MKS) homolog [Source:UniProtKB/TrEMBL;Acc:C8JQP7]) HSP 1 Score: 72.7886 bits (177), Expect = 3.769e-16 Identity = 47/135 (34.81%), Postives = 80/135 (59.26%), Query Frame = 2 Query: 149 NNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 +N+RS + YQ++L Q+ S ++F+ ++ F KG ILPY E +++ +EY RI +G GNL E + ++A+S +L+IP I+ V+L +Q Y +IE +F M F ++E + L++ ITFS + Sbjct: 3 SNVRSSLVYQILLSLQKTLSIVYFLVIFILYFYKGAILPYPRYVRVMEFFVIIPFIPIEYLRINWGSRGNLLESTAFLALSTVLSIPIIIILVYLEFFQNYVLFIEEIFTYVMGFFVILETLLSLVLTITFSSSG 137
BLAST of Transmembrane protein 80 vs. Ensembl Fly
Match: TMEM216 (gene:FBgn0037614 transcript:FBtr0081905) HSP 1 Score: 50.8322 bits (120), Expect = 5.102e-8 Identity = 31/125 (24.80%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 173 YQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 Y+++++ +Y ++ E+ + +K L Y S E +LL++ I+E RI +G +L+++ + S +LT+P++ ++L +QT+ +E++ A M+ EL++ + I T R Sbjct: 7 YEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICTMCR 131
BLAST of Transmembrane protein 80 vs. Ensembl Fly
Match: TMEM216 (gene:FBgn0037614 transcript:FBtr0300544) HSP 1 Score: 50.8322 bits (120), Expect = 5.102e-8 Identity = 31/125 (24.80%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 173 YQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 Y+++++ +Y ++ E+ + +K L Y S E +LL++ I+E RI +G +L+++ + S +LT+P++ ++L +QT+ +E++ A M+ EL++ + I T R Sbjct: 7 YEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICTMCR 131
BLAST of Transmembrane protein 80 vs. Ensembl Fly
Match: TMEM216 (gene:FBgn0037614 transcript:FBtr0300543) HSP 1 Score: 50.8322 bits (120), Expect = 5.102e-8 Identity = 31/125 (24.80%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 173 YQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 Y+++++ +Y ++ E+ + +K L Y S E +LL++ I+E RI +G +L+++ + S +LT+P++ ++L +QT+ +E++ A M+ EL++ + I T R Sbjct: 7 YEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICTMCR 131
BLAST of Transmembrane protein 80 vs. Ensembl Zebrafish
Match: TMEM216 (si:rp71-1d10.5 [Source:NCBI gene;Acc:555988]) HSP 1 Score: 65.4698 bits (158), Expect = 5.389e-13 Identity = 53/145 (36.55%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 119 NLEMHTTKLYNNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 N+ H + + S P Q++ H +Y A FF++E+L+ KG ILPY N ++VLLL + LE R+ YG GNL ++S + VS + +P V V+ L+ QT+ +E V A +L F EL+ ++ I FSRAN Sbjct: 17 NMAAHGRQ---PVLSSTPLQILFHLNGWYFAAFFVAEILMFIYKGVILPYPQDNLILDVVLLLLFSGLETLRLFYGWKGNLCQRSLALFVSVAILVPCAVLSVYYLLLQTFVLRLEFVLNAVLLCFYGFELVLGVMTISIFSRAN 158
BLAST of Transmembrane protein 80 vs. Ensembl Zebrafish
Match: TMEM216 (si:rp71-1d10.5 [Source:NCBI gene;Acc:555988]) HSP 1 Score: 60.077 bits (144), Expect = 3.851e-11 Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S P Q++ H +Y A FF++E+L+ KG ILPY N ++VLLL + LE R+ YG GNL ++S + VS + +P V V+ L+ QT+ +E V A +L F EL+ ++ I FSR Sbjct: 13 SSTPLQILFHLNGWYFAAFFVAEILMFIYKGVILPYPQDNLILDVVLLLLFSGLETLRLFYGWKGNLCQRSLALFVSVAILVPCAVLSVYYLLLQTFVLRLEFVLNAVLLCFYGFELVLGVMTISIFSR 141
BLAST of Transmembrane protein 80 vs. Ensembl Xenopus
Match: pkd1 (polycystin 1, transient receptor potential channel interacting [Source:Xenbase;Acc:XB-GENE-483409]) HSP 1 Score: 59.3066 bits (142), Expect = 1.154e-10 Identity = 47/129 (36.43%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S P +V+ +Y A +F+ E LI KG ILPY T N E LL +E R+ G GNL E+ + VS LTIP + V+ L+ QTY +E V +L+F +E I +IT R Sbjct: 15 SSTPLEVLFFLNGWYCASYFLIETLIFIYKGLILPYPTSNLILESFLLFLYLGIEVSRLFLGCRGNLCERKLPLVVSLGLTIPAGLLAVYFLLLQTYALRLETVLNCILLLFYGLEAILSCTALITLCR 143
BLAST of Transmembrane protein 80 vs. Ensembl Xenopus
Match: TMEM80 (transmembrane protein 80 [Source:NCBI gene;Acc:100486338]) HSP 1 Score: 50.0618 bits (118), Expect = 2.596e-7 Identity = 40/129 (31.01%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S VP Q++L+ Y +F++ LL++ K Q+ Y N + ++ LL M ILE R+ G GNL E+ + S L+T+ I ++ L+WQTY +++ +L+ +E+I ++L + F R Sbjct: 14 SSVPLQMLLYLNIIYYVFYFLATLLMIIYKSQVFSYPGSNLALDLCLLFLMGILEPVRLYLGTQGNLAEEEIPLGSSLLVTVGNIFLAIYFLVWQTYILRADLIINIILLVIYGLEVILEVLTVAAFFR 142
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Match: Tmem216 (transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]) HSP 1 Score: 60.8474 bits (146), Expect = 2.055e-11 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P +V+ +Y A +F+ ELLI KG +LPY T N ++V+LL +E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 9 SSTPLEVLFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 139
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Match: Tmem216 (transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]) HSP 1 Score: 60.8474 bits (146), Expect = 2.055e-11 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P +V+ +Y A +F+ ELLI KG +LPY T N ++V+LL +E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 9 SSTPLEVLFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 139
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Match: Tmem216 (transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]) HSP 1 Score: 48.9062 bits (115), Expect = 1.321e-7 Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 296 VLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 +LLL + I E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 1 MLLLYLGI-EVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 85
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Match: Tmem216 (transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]) HSP 1 Score: 48.9062 bits (115), Expect = 1.321e-7 Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 296 VLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 +LLL + I E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 1 MLLLYLGI-EVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 85
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Match: Tmem216 (transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]) HSP 1 Score: 48.9062 bits (115), Expect = 1.321e-7 Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 296 VLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 +LLL + I E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 1 MLLLYLGI-EVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 85
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Match: sp|E7EYQ9|TM216_DANRE (Transmembrane protein 216 OS=Danio rerio OX=7955 GN=tmem216 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.068e-12 Identity = 53/145 (36.55%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 119 NLEMHTTKLYNNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 N+ H + + S P Q++ H +Y A FF++E+L+ KG ILPY N ++VLLL + LE R+ YG GNL ++S + VS + +P V V+ L+ QT+ +E V A +L F EL+ ++ I FSRAN Sbjct: 17 NMAAHGRQ---PVLSSTPLQILFHLNGWYFAAFFVAEILMFIYKGVILPYPQDNLILDVVLLLLFSGLETLRLFYGWKGNLCQRSLALFVSVAILVPCAVLSVYYLLLQTFVLRLEFVLNAVLLCFYGFELVLGVMTISIFSRAN 158
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Match: sp|Q9P0N5|TM216_HUMAN (Transmembrane protein 216 OS=Homo sapiens OX=9606 GN=TMEM216 PE=1 SV=3) HSP 1 Score: 60.8474 bits (146), Expect = 1.394e-10 Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S P +++ +Y+A +F+ EL I KG +LPY T N ++V+LL +E R+ +G GNL ++ +++S LT P+ + + L+ QTY +E + +L FC EL+ ++L + FSR Sbjct: 16 SSTPLEILFFLNGWYNATYFLLELFIFLYKGVLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILLFFCGSELLLEVLTLAAFSR 144
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Match: sp|Q9CQC4|TM216_MOUSE (Transmembrane protein 216 OS=Mus musculus OX=10090 GN=Tmem216 PE=1 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 1.438e-10 Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P +V+ +Y A +F+ ELLI KG +LPY T N ++V+LL +E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 9 SSTPLEVLFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 139
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Match: sp|B6ID01|TM216_RAT (Transmembrane protein 216 OS=Rattus norvegicus OX=10116 GN=Tmem216 PE=2 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 2.323e-10 Identity = 43/131 (32.82%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P +++ +Y A +F+ ELLI KG +LPY T N ++V+LL +E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC EL+ ++L + TFS + Sbjct: 9 SSTPLEILFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQRKMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLATFSSMD 139
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Match: sp|Q2TA01|TM216_BOVIN (Transmembrane protein 216 OS=Bos taurus OX=9913 GN=TMEM216 PE=2 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 7.063e-8 Identity = 35/113 (30.97%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFC 499 S P +++ +Y A +F+ EL I KG +LPY T N ++V+L +E R+ +G GNL ++ + +S LT P+ + + L+ QTY +E + + +L FC Sbjct: 9 SSTPLEILFFLNGWYYATYFLLELFIFLYKGLLLPYPTANLVLDVVMLFLYLGVEVIRLFFGTKGNLCQRKMPLGISVALTFPSTMMASYYLLLQTYVLRLEAIMNSILLFFC 121
BLAST of Transmembrane protein 80 vs. TrEMBL
Match: V3Z4X5 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_204590 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.841e-21 Identity = 51/133 (38.35%), Postives = 88/133 (66.17%), Query Frame = 2 Query: 155 IRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 +RS +PYQ++L+ +Y F ++E+LI K + LP+ + + E++L+ +A LE R+ +G GNLTEQ+ V +S LL+IP I+ +++L+WQTY ++V+ A L F +EL+F ++ II+F+RA+ Sbjct: 12 VRSSLPYQILLYLNGWYFGFFLLAEVLIFIFKAETLPFASNTLAAEVILVFLLAALEGLRLFFGRKGNLTEQTVGVIISVLLSIPAILGAIFILLWQTYVLRLDVILAAIQLAFIALELVFGVISIISFARAS 144
BLAST of Transmembrane protein 80 vs. TrEMBL
Match: A0A1S3IQM8 (transmembrane protein 216 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106166380 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.427e-19 Identity = 53/133 (39.85%), Postives = 86/133 (64.66%), Query Frame = 2 Query: 155 IRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 IRS +PYQ++L+ +Y F+I+E+LI KG+ LPY + E+VLL + LE RI +G GNLTE+ V + +L++PT+ +++L+WQTY +EV+ A L+F +EL+F ++ ++TF+RA Sbjct: 14 IRSSLPYQILLYCNAWYFGFFWIAEILIYIFKGETLPYPNGVLAAEVVLLFFLGGLESLRIFFGQKGNLTERMLTVVLCIVLSLPTLAGILYILLWQTYVLRVEVILSAIELVFIALELLFGIISVVTFARAT 146
BLAST of Transmembrane protein 80 vs. TrEMBL
Match: A0A1S3IS64 (transmembrane protein 216 isoform X2 OS=Lingula unguis OX=7574 GN=LOC106166380 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.403e-18 Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 155 IRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 IRS +PYQ++L+ +Y F+I+E+LI KG+ LPY + E+VLL + LE RI +G GNLTE+ V + +L++PT+ +++L+WQTY +EV+ A L+F +EL+F ++ ++TF+R Sbjct: 14 IRSSLPYQILLYCNAWYFGFFWIAEILIYIFKGETLPYPNGVLAAEVVLLFFLGGLESLRIFFGQKGNLTERMLTVVLCIVLSLPTLAGILYILLWQTYVLRVEVILSAIELVFIALELLFGIISVVTFAR 144
BLAST of Transmembrane protein 80 vs. TrEMBL
Match: A0A210Q8E8 (Transmembrane protein 216 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT07816 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.581e-18 Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 2 Query: 155 IRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 IRS +PYQV+L+ +Y FF+ E+LI KG+ LPY E++LL +A +E RI + GNLTE+ V VS +L++P I+ ++LL+WQTY ++V+ A L F +ELI ++ II F+R Sbjct: 17 IRSSLPYQVLLYLNGWYFGFFFVCEILIFIFKGETLPYADNVLLAEVILLFVLAAIEAMRIFFAQKGNLTERIVGVVVSIMLSVPAILGALFLLLWQTYVLKVDVILAAIQLAFTGLELIMAIVSIINFAR 147
BLAST of Transmembrane protein 80 vs. TrEMBL
Match: A0A5J4N8N3 (Transmembrane protein 216 OS=Paragonimus westermani OX=34504 GN=DEA37_0011100 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.906e-18 Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S VP Q++L + Y+ ++FI + KG L + ++ EI+LLL +E R+ NL E F +A+S LL P +VFCVW+++WQTYTFYIE++ G+L+F L E+I +L+ ITF+R Sbjct: 14 SSVPLQILLRYNTVYTTVYFICHATMHAYKGIELRFPRNHYISEIILLLFFMSIESARLLLMHRSNLLESEFEMAMSILLFFPNVVFCVWVVLWQTYTFYIELILTVGLLMFYLSEMIIGILLFITFAR 142
BLAST of Transmembrane protein 80 vs. Ensembl Cavefish
Match: si:rp71-1d10.5 (transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]) HSP 1 Score: 56.9954 bits (136), Expect = 4.180e-10 Identity = 50/131 (38.17%), Postives = 76/131 (58.02%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P QV+ + +Y A+FFI+E+L+ KG +LPY N +IVLLL LE R+ YG GNL E++ +++S + +P V V+ L+ QT+ +E + A +L F +ELI L+ I F+R N Sbjct: 7 SSTPLQVLFYLNSWYFAVFFIAEILMFIYKGVLLPYPQSNLILDIVLLLLYLGLETLRLFYGWKGNLCERTLTLSISIGVLVPCTVLSVYYLLLQTFVLRLEFILNAVLLCFYGLELILGLITISAFARYN 137
BLAST of Transmembrane protein 80 vs. Ensembl Cavefish
Match: ENSAMXT00000052229.1 (transmembrane protein 80 [Source:NCBI gene;Acc:103025724]) HSP 1 Score: 47.3654 bits (111), Expect = 1.096e-6 Identity = 40/137 (29.20%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 146 YNNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMEL--IFKLLVIITFSRA 550 ++++ S V Q++L+ Y +FIS L ++ K Q+L Y + + ++ LLL MA L+ R+ +G+ GNL E Y++ + T T++ V+ L+WQ+Y +V+ + ++ CL L + + F+RA Sbjct: 9 HSSVLSSVLLQILLYLSSIYGLFYFISSLCLIIYKSQVLSYPDSDLALDVCLLLLMAGLDVIRLYWGVRGNLLESEKYISANLFSTGATVLLAVYFLVWQSYVLRADVIINS--ILLCLYGLAGVVGFGALARFNRA 143
BLAST of Transmembrane protein 80 vs. Ensembl Nematostella
Match: EDO31652 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXC1]) HSP 1 Score: 68.5514 bits (166), Expect = 8.837e-15 Identity = 46/133 (34.59%), Postives = 80/133 (60.15%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKG----QILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSR 547 S +P Q+ L+ +YS +F ++E+L+ KG +LPY + + EI+L++ A +E R+ +G GNL E+S + +S +L IP + +++L+WQTY IEV+ VA L F +E+I + ++TF + Sbjct: 12 SSLPLQIFLYLNVWYSMVFCVAEILLYIYKGIVLSSLLPYTSAALTVEILLVIFWAFMEGVRLFFGYKGNLAERSMALIISIVLGIPVLFIELFVLLWQTYVLRIEVILVAISLAFLGIEIILSIAAMLTFKK 144
BLAST of Transmembrane protein 80 vs. Ensembl Medaka
Match: si:rp71-1d10.5 (transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]) HSP 1 Score: 53.5286 bits (127), Expect = 8.339e-9 Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 161 SLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLIFCLMELIFKLLVIITFSRAN 553 S P QV+L+ +Y A F+++E+L+ KG +LPY + N ++VLLL LE RI YG GNL E+S +S + + V+ L+ QT+ +E + A +L F +E + + + +FSR+ Sbjct: 11 SSTPLQVLLYLNSWYFAAFYLAEILMFIYKGILLPYPSDNLVLDVVLLLLFLALEALRIFYGWKGNLCERSLTSCLSLFILVSCAALAVYYLLLQTFVLRLEFLLCAVLLCFYGLEFLLGFIALSSFSRSK 141
BLAST of Transmembrane protein 80 vs. Ensembl Medaka
Match: ENSORLT00000038473.1 (transmembrane protein 80 [Source:NCBI gene;Acc:101157050]) HSP 1 Score: 46.595 bits (109), Expect = 3.656e-6 Identity = 38/130 (29.23%), Postives = 70/130 (53.85%), Query Frame = 2 Query: 104 SNFYHNLEMHTTKLYNNIRSLVPYQVVLHFQQYYSAXXXXXXXXXXXXKGQILPYVTVNFSGEIVLLLAMAILEYFRIRYGMIGNLTEQSFYVAVSFLLTIPTIVFCVWLLIWQTYTFYIEVVFVAGMLI 493 S F +++ + ++ + S VP Q++L Y ++F+ L +L K +L Y ++ LL +A LE + G+ GNLTE Y+ + ++T TI+ V+ L+WQTY +V+ ++G+L+ Sbjct: 24 SCFVNDVCLVGRSVHAGVLSSVPLQLLLRLTSIYFIVYFLFTLGLLVKKSVVLSYPPDALVYDVALLFLLAALEVLHLLCGVKGNLTESGGYILANIIVTAATILLTVYFLVWQTYVMRADVI-ISGILL 152 The following BLAST results are available for this feature:
BLAST of Transmembrane protein 80 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transmembrane protein 80 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Transmembrane protein 80 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Transmembrane protein 80 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Transmembrane protein 80 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Transmembrane protein 80 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transmembrane protein 80 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transmembrane protein 80 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transmembrane protein 80 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of Transmembrane protein 80 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Transmembrane protein 80 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Transmembrane protein 80 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Transmembrane protein 80 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Transmembrane protein 80 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 0
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020686 ID=SMED30020686|Name=Transmembrane protein 80|organism=Schmidtea mediterranea sexual|type=transcript|length=685bpback to top protein sequence of SMED30020686-orf-1 >SMED30020686-orf-1 ID=SMED30020686-orf-1|Name=SMED30020686-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=143bp MHTTKLYNNIRSLVPYQVVLHFQQYYSALFFISELLILFIKGQILPYVTVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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