SMED30020634

Overview
NameSMED30020634
Smed IDSMED30020634
Length (bp)12169
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30020634 (SMED30020634) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30020634 (SMED30020634) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30020634 (SMED30020634) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30020634 (SMED30020634) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30020634

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30020634SMESG000081436.1 dd_Smed_v4_9784_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
pharynxSMED30020634SMESG000081436.1 dd_Smed_v6_9784_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
secretory systemSMED30020634SMESG000081436.1 dd_Smed_v6_9784_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30020634 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.001035:18067..37132 -51111
Homology
[Close]
BLAST of SMED30020634 vs. Planmine SMEST
Match: SMESG000081436.1 (SMESG000081436.1)

HSP 1 Score: 3364.32 bits (8722), Expect = 0.000e+0
Identity = 1775/1801 (98.56%), Postives = 1782/1801 (98.95%), Query Frame = 3 
Query: 6756 TLAESSNEELKLKEHIEMIKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTRVQEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQIANEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQSASNKEVLEKNYLVXXXXXXXXXXQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSWSFQDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTSFLVSKSSPDRIGSGQEAQSEKLASKNRELSLTIKDLQEQNLLMKNKIIDLCNCLEKEQELYKQFNEEXXXXXXXXXXXXNLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNSNLITSLQERINNFEIFIQTKQENVYLDHKIFESIHSLNVDVENFHSELSEIIPIKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETEQKIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVEIQTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNSSMNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVNSLEKELADINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSXXXXXXXXIDQLEKDYADELEQSEIAKSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHIEKDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWXXXXXXXXXXXXXXXXXIVEFRKKLSNKXXXXXXXXXXDYIIEIEQHKNQISQLKQENKQSLAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSETSDSLWSSNPESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS 12158
             +AESSNEELKLKEHIE IKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTR QEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQI+NEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQS SNKEVLEKNYLVLKAKFLKFKKQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSW  QDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTS LVSKSSPDRIGSGQEAQSEK ASKNRELSLTIK+L+EQNLLMKNKIIDLCNCLEKEQELYKQFNEEKIILIDDLTKKINLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNS LITSLQERINNFEI IQTKQENVYLDHKIFESIHSLNVDVENFHSELSEII IKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETE KIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVE QTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNS+MNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVN LEKEL DINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSNNLQLLNLIDQLEKDYADELEQSEI KSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHI+KDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWLKERKELKLLNKNKDNKIVEFRKKLSNKTNETTENTENDY+IEIEQHKNQISQLKQENKQ LAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSE SDSLWSSN ESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS
Sbjct: 1565 AIAESSNEELKLKEHIETIKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTRAQEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQISNEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQSGSNKEVLEKNYLVLKAKFLKFKKQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSWCVQDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTSSLVSKSSPDRIGSGQEAQSEKFASKNRELSLTIKNLEEQNLLMKNKIIDLCNCLEKEQELYKQFNEEKIILIDDLTKKINLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNSYLITSLQERINNFEISIQTKQENVYLDHKIFESIHSLNVDVENFHSELSEIITIKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETEPKIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVETQTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNSNMNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVNLLEKELVDINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSNNLQLLNLIDQLEKDYADELEQSEITKSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHIDKDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWLKERKELKLLNKNKDNKIVEFRKKLSNKTNETTENTENDYVIEIEQHKNQISQLKQENKQFLAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSENSDSLWSSNTESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS 3365

HSP 2 Score: 2496.85 bits (6470), Expect = 0.000e+0
Identity = 1458/1474 (98.91%), Postives = 1462/1474 (99.19%), Query Frame = 2 
Query: 2339 VFQIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLALREDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENXXXXXXXXXXXXSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPXXXXXXXXXXXXTEPLSMAIENXXXXXXXXXXXXMQELQNTIKELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELXXXXXXXSNQMSGHSNSFXXXXXXXXXXXXXINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINXXXXXXXXXXXXXXXXNNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIEKNASLYEQLSQTTINIKELNENLSRLQTEKSNVINELENVKATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKIIIHLEQEQNNNETKFNEQLNSYKNERDKITSDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYLIENAELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNEXXXXXXXXXXXXXXXXVSTQNLIVIEEEKNNILSEFGNLKLEMEGVKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAXXXXXXXXXXXXXXXGNEDNEIVLKNFSEKNKSLKHXXXXXXXXXXXXXXXXXXGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA 6760
              QIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLAL EDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENKKKQLTFKAKAKSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPSFDFKDSYDSFSTEPLSMAIENLESLCSLKSKK+MQELQNTI+ELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELIKKIIIISNQMS HSNSFLDLENENLRLNLEINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINESKLKDELKSLKKHLENNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIE+NASLYEQLSQ TIN KELNENLSRLQTEKSNVINELENV ATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKI IHLEQEQNNNETKFNEQLNSYKNERDKI SDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYL E AELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNENSLLKDKFNKLLNDGNVSTQNLIVIEEEKNNILSEFGNLKLEME VKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAKELENLLQKLLKLTKGNEDNEIVLKNFSEKNKS+KHIINELNKIEEKLKEETLNGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA
Sbjct:   92 ALQIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLALLEDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENKKKQLTFKAKAKSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPSFDFKDSYDSFSTEPLSMAIENLESLCSLKSKKRMQELQNTIEELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELIKKIIIISNQMSCHSNSFLDLENENLRLNLEINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINESKLKDELKSLKKHLENNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIEENASLYEQLSQATINSKELNENLSRLQTEKSNVINELENVMATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKISIHLEQEQNNNETKFNEQLNSYKNERDKIISDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYLTEIAELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNENSLLKDKFNKLLNDGNVSTQNLIVIEEEKNNILSEFGNLKLEMESVKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAKELENLLQKLLKLTKGNEDNEIVLKNFSEKNKSVKHIINELNKIEEKLKEETLNGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA 1565
[Close]
BLAST of SMED30020634 vs. Planmine SMEST
Match: SMESG000081436.1 (SMESG000081436.1)

HSP 1 Score: 3363.55 bits (8720), Expect = 0.000e+0
Identity = 1775/1801 (98.56%), Postives = 1782/1801 (98.95%), Query Frame = 3 
Query: 6756 TLAESSNEELKLKEHIEMIKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTRVQEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQIANEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQSASNKEVLEKNYLVXXXXXXXXXXQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSWSFQDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTSFLVSKSSPDRIGSGQEAQSEKLASKNRELSLTIKDLQEQNLLMKNKIIDLCNCLEKEQELYKQFNEEXXXXXXXXXXXXNLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNSNLITSLQERINNFEIFIQTKQENVYLDHKIFESIHSLNVDVENFHSELSEIIPIKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETEQKIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVEIQTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNSSMNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVNSLEKELADINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSXXXXXXXXIDQLEKDYADELEQSEIAKSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHIEKDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWXXXXXXXXXXXXXXXXXIVEFRKKLSNKXXXXXXXXXXDYIIEIEQHKNQISQLKQENKQSLAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSETSDSLWSSNPESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS 12158
             +AESSNEELKLKEHIE IKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTR QEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQI+NEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQS SNKEVLEKNYLVLKAKFLKFKKQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSW  QDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTS LVSKSSPDRIGSGQEAQSEK ASKNRELSLTIK+L+EQNLLMKNKIIDLCNCLEKEQELYKQFNEEKIILIDDLTKKINLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNS LITSLQERINNFEI IQTKQENVYLDHKIFESIHSLNVDVENFHSELSEII IKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETE KIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVE QTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNS+MNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVN LEKEL DINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSNNLQLLNLIDQLEKDYADELEQSEI KSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHI+KDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWLKERKELKLLNKNKDNKIVEFRKKLSNKTNETTENTENDY+IEIEQHKNQISQLKQENKQ LAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSE SDSLWSSN ESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS
Sbjct: 1565 AIAESSNEELKLKEHIETIKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQLNTQITELQDDLKTRAQEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDLNHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFSKMKTADESMILELKESIHKLQDAESKLKLEYLQISNEKESLSKELIDLKNLKDEKASIDRENLTSTRSGGVISTDETNGEKEIQSGSNKEVLEKNYLVLKAKFLKFKKQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDSFCQCNIIDSSWCVQDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKVNFEIEEFLERNERVTSSLVSKSSPDRIGSGQEAQSEKFASKNRELSLTIKNLEEQNLLMKNKIIDLCNCLEKEQELYKQFNEEKIILIDDLTKKINLTITENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTENSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENCKFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEFEETNNKNSYLITSLQERINNFEISIQTKQENVYLDHKIFESIHSLNVDVENFHSELSEIITIKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGVLHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLISKNGTDFENSFQQMEHEEPVINYETLPFRKSKNETEPKIQVQNYVLNKLTDTFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVETQTDMDLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIMNDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFLKQELEFLKCEREEQNSNMNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVDTNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEESCRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVNLLEKELVDINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSNNLQLLNLIDQLEKDYADELEQSEITKSKIELKLNKAIQVINKLKKQLKQSHARVLNLNDEIKSLKTPDPFHKILEEKECHIDKDSTTVDVSTQTNFELDNIALCKEENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGKGFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMRIERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEMNNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKLDEKEQDIDNISDELRKNLSIFEKERIDWLKERKELKLLNKNKDNKIVEFRKKLSNKTNETTENTENDYVIEIEQHKNQISQLKQENKQFLAQHREEINKYKGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSENSDSLWSSNTESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSILNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETSENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHKYPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQS 3365

HSP 2 Score: 2496.85 bits (6470), Expect = 0.000e+0
Identity = 1458/1474 (98.91%), Postives = 1462/1474 (99.19%), Query Frame = 2 
Query: 2339 VFQIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLALREDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENXXXXXXXXXXXXSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPXXXXXXXXXXXXTEPLSMAIENXXXXXXXXXXXXMQELQNTIKELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELXXXXXXXSNQMSGHSNSFXXXXXXXXXXXXXINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINXXXXXXXXXXXXXXXXNNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIEKNASLYEQLSQTTINIKELNENLSRLQTEKSNVINELENVKATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKIIIHLEQEQNNNETKFNEQLNSYKNERDKITSDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYLIENAELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNEXXXXXXXXXXXXXXXXVSTQNLIVIEEEKNNILSEFGNLKLEMEGVKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAXXXXXXXXXXXXXXXGNEDNEIVLKNFSEKNKSLKHXXXXXXXXXXXXXXXXXXGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA 6760
              QIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLAL EDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENKKKQLTFKAKAKSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPSFDFKDSYDSFSTEPLSMAIENLESLCSLKSKK+MQELQNTI+ELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELIKKIIIISNQMS HSNSFLDLENENLRLNLEINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINESKLKDELKSLKKHLENNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIE+NASLYEQLSQ TIN KELNENLSRLQTEKSNVINELENV ATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKI IHLEQEQNNNETKFNEQLNSYKNERDKI SDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYL E AELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNENSLLKDKFNKLLNDGNVSTQNLIVIEEEKNNILSEFGNLKLEME VKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAKELENLLQKLLKLTKGNEDNEIVLKNFSEKNKS+KHIINELNKIEEKLKEETLNGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA
Sbjct:   92 ALQIIQDDLKNQLENVKSHYNETLSIRQEEIESLRLTGSQLREQLALLEDDMIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQQSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIETLNDTLKENKKKQLTFKAKAKSLEKQLASLKTLNDDKEKQLNSELLIRDEIIVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPSFDFKDSYDSFSTEPLSMAIENLESLCSLKSKKRMQELQNTIEELCQYRTTIDQQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKDFDGEIMNFSSENLDQCSKSELIKKIIIISNQMSCHSNSFLDLENENLRLNLEINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTESSYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKLDENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENSSLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLNGEITINESKLKDELKSLKKHLENNKIRIQEYLKEKEDGLILTEDLNKELLLSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCDFSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEKEIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLIDLEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDIFKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIEENASLYEQLSQATINSKELNENLSRLQTEKSNVINELENVMATVLVYQKEKDDNSILRNDLNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLLEKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKISIHLEQEQNNNETKFNEQLNSYKNERDKIISDLEEMRSKLIQIEKNKTDLEVKLTTLTEEKSYLTEIAELLNSSITKYQKEIANHVNIQNTLMKELEDVKYKFKTLEITSKEDEKLLIDFNNENSLLKDKFNKLLNDGNVSTQNLIVIEEEKNNILSEFGNLKLEMESVKSLSNQNENKIKLLLEENVILKNKFENSINSETELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIESLTIKNDSLEENVVILTEENDINAKELENLLQKLLKLTKGNEDNEIVLKNFSEKNKSVKHIINELNKIEEKLKEETLNGFNQIMDIKDNLIIKENEKVQQDRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLEKSTEDKLSLIHSLNDQINLFQNA 1565
The following BLAST results are available for this feature:
BLAST of SMED30020634 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30020634 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000081436.10.000e+098.56SMESG000081436.1[more]
SMESG000081436.10.000e+098.56SMESG000081436.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30020634 ID=SMED30020634|Name=SMED30020634|organism=Schmidtea mediterranea sexual|type=transcript|length=12169bp
AAATATTTTAACAAAAAATAACCTTTTTGCTGATTTTTTAAAGTTTTTAA
AATTCTGTTCTAGATCTAGTTTTAATAAATTTTGTTTCATTCGTTGTACA
TGTTTAATTGTTGTATTATAACTAATTATTTGAGTTATTAAATATTTTAA
AATTCGTGTATATATATATATATATCTGAGCGACTTGGTGAGATGTGCCG
CGAGCCATAAGTTTGGCACTACTGGTTTGATTTGATATACAATTACTAAA
ATAATAAGACGTTTTTACGTGTTACACACACAGATTCTTTGGTTATTTTT
GGAATCCAAAGACAAAATCAAACCATGAAAAATGGCATAAATTATAACTG
TTGATAAGCGTTTTTACAAATGCCACATAACACAGAAATTTTTTTAGAAA
TGTAATTCGTTCAAAGTAAAGTTTGTCATGTTATTCAGAAATTTAAATAT
AAATTTATATATTTAGACCAGCAAAAGAAAATATAAAAAAATTTTTTTTT
TAAAATTTCATTTAAAATTTCAGTTTCATAATTATGAATTTTATTGAAAG
TGCGTTGTCAGTTAAAAACTGTTCTATATATAAAATAAGATTTCACGATT
ATGAAATTATTTTGTAATTAAAATATTATTTCCATTAATTATTTCGGATT
TCTATGAATGATATGCGTTTGCGACAGAAATAAGAGAGACTCATTTATCA
ATATAGATTTATTTTAACACTGATTAATAACTTTCTAAATAACTTTGAAA
CTGTAATAAAAAACATTAGTTATGAAATGACATAAATATGAAGTATTATC
ATTTTTCCTTTTATCGGTAAATTGACTCAATTGTTCTATTACGTAAAATA
TCCGCACTATAAAGCTCAACGGACTTATCAACGTCTATTTTCCGTCTATT
TTTCCTGCTCTTCTAACATTGTCTTCTAAACCAAAACCTTGTACATGATC
TTTCTTGAAATGGTTTGTATAAATTTTTCTGACATTGAAATCAATTTTGA
TAAACTCTTTTGTTAACAGAATTGCGCGCTCGTCACTATCAACCATCTCA
ACTGCGTCATACGTGCACGTTGAGTGCAACATCGTCTCCGTTGTTTATGA
GCATTCTTGTTGATGCAATTTTGTATTCTGTGTAGTGAATTGCTACAAAG
ATGAGATATCATCCACTAAACCATAGGTCGGCAAATACGTTGCATAAAGT
GCCATTTAGGTTCAAATAAAGAGCAAAAATGTTAAAATTTTATTATTCCA
AATGCTCCTTTAAATTTTGTAAAATTGGAATTTTTTATTGACAACACTGC
AAAATTGAGATTTTGTTAATCTATTACATTTTTAATTAAATCTTTTGGGC
ATTTTCCATCATTACTGATTTGTGGTACCCAGAAAAGGTAAAGGTGAGCA
TTGAAGGACTCACTGCTTGAATGGTATGCAAAATAAAATTACAATACAAC
TGTGAAGAATTTATAAACGTAATCAAAGAAAGTTTGCAGTTACAAAAAAG
AAATTAGCTCAACTGACAAGTATAATTTTAAAAAAATAATATTAAATAAT
TGCATTTTTAAGTTTTGATTTTTGTTTATTTTTTACATTATTTATCAAAT
AAATCAAATGAATTGTTTTGTTTTGTTTTAATTATTTTCTAATGATGGTT
GTGCTACTCCCCCATTCACTAGACGAAAAAAATAAATGGTTATATATATT
TATTTATTTATTTATATATATTTATATACAGTCGCTTTCACAGGTTAGAA
GAGGTATATGAATATGGTGTGCTATTATAATGTAAAAAGATCTACCAGGC
GTTATCCCATGGTAATATTTTTCAACATGATTAATATCACTGCTCTTAAT
TCTTTTATTATATTGAATATAATGAATCTACTTGAAGGAAAAAAAGAATA
AACAAATGTCATTTCTTATTGATTTGGGAAGAGAAATGGCAGATGTTGAT
TTGACATTTCCACAATCATCTAATTTGGTTTCAGTAAACTCAACTCCAAA
GAAAATAAGTCGTTGTAACTATTGGATCTCAAAAAGGATCGTAAAACAAA
CATTTTGTGTTCCAAATGTAAAAACATTATCAAGCATAGAACACTGGATA
GTAGAAAATTTTGAGAAAAATTGAGATTTCCAAGAAGATTTTCAATTTTA
CGGAAAATATATCACTAGAATCCCCCTCCCCCAATATTGTTGAGAATGTA
GAGTAAGTATTTCGTGAAAAAGGACCATTATTGGAATTGCTCGTGGACGA
TGGAGTTTGTAAAACCTTTTTAAAATTTTTGAACATATGCTTGCTGCAGC
CGGTTAAGAATATAAAATCAAGTTTTATTTTACGGCAAGTCTTTCAAATA
ATTCAAGATGATTTGAAAAATCAGTTAGAAAATGTCAAAAGCCATTATAA
TGAAACATTGTCTATCCGTCAAGAAGAAATTGAGAGTTTGAGGTTGACTG
GCAGTCAATTAAGAGAACAGTTAGCGTTGCGAGAAGACGATATGATTCAA
GTAATGCAAAGGCATGAAAATCAAATTATTAATATGTTCAATGAAATTGA
AACAAAAACAGAACAATCTGATGTGGATCAAATGGTAAAGATCTTAAAAG
ACCAAATCGCAAATTTACGGGAAGCATTAATTGATAAACAGCAATCACTA
AAAATAGCAAATGACAAATTAGAAGCACAGGATCAGATCATGCGAAAACT
GCAAGAAACAAATTTAGATTTAGAAGAACAAGTTAAACGTTACGAGCAAA
AATATTACACTGATCAGACTTATCAAAAACATATTGAAACATTAAACGAC
ACTTTAAAAGAAAATAAAAAGAAACAATTGACATTCAAAGCCAAAGCAAA
ATCGCTTGAAAAGCAACTAGCATCATTAAAGACACTTAATGACGATAAAG
AAAAGCAACTTAATAGTGAATTGTTGATTCGGGATGAAATAATTGTCAAG
CAAAATATCTTAATTGACGAATTGCGTCAAACCGAAAATAGCCTTCGCCA
AAGTCTCAATCGCTCAATCGCAATTCAAGAAGAACAAATATTAGAACTTA
AATATTGGGAAAATTTTAATAATTTGCTTCCTTCGTTTGATTTTAAAGAT
TCTTACGATTCATTTTCTACCGAACCTCTTTCTATGGCTATAGAAAACCT
TGAATCGTTGTGCTCTTTAAAAAGTAAGAAAAAGATGCAAGAACTTCAAA
ATACTATAAAAGAATTGTGCCAATATCGAACTACAATTGATCAACAAAAT
AAATATTTCCGTCATTTAGAAAATCAAATTAAATTATTGAAAAACTGTGT
TACTAATGTAAATAAATTTAACATTATTCTTAATAAGCATATCGGCGTAT
TAGCTCAGGACTATCAGCAATTTTATCAGTCATTGAAGGATTTCGATGGA
GAAATTATGAATTTTAGCAGTGAAAACTTGGATCAGTGTTCAAAATCCGA
GTTGATCAAGAAAATTATCATTATTTCTAATCAAATGTCTGGTCATAGCA
ATAGTTTCCTGGATTTAGAAAACGAAAATCTTAGACTGAATCTGGAAATT
AATAAAATCATGGAAGTTTGCAGTGCAATGAGTTTGAAAATAGATAATAC
ATATCAAGAAATTGAATCGTTTTTGTTAACAAAAAATGATAATTTTAATA
AATTGAATTTCATTGAAAAACCTAATGATCAAACCGAATCAAGTTATGTT
GAAAAAATATTCCAAATTATTATAGAAAGAAATTTACAAATACGAATCGA
AGTTCAACAAAAAAACAATGAAGAATTTCAAAAATTAAATAAAATAAATG
AAAATTTAAATTTCCAAGTAAAAAATTTACTATTGAAACTAGACGAAAAT
GAAATTATCTCAAATAATAAAACGGATGAATCGGAAAAATTCTCCAGAGA
ATTCGAAGAAGTAAAATGTGAAATCGTTTTATTAGAAGATCAAAGAGAAA
ATAATAGATCAATTATATCAGATTTAACTAACGAAAATAGTTCATTGAAA
GTGGAGCTCGAGAATTTAGGTGATCAGTTATTACGCACGACTAATGAAAA
CATAAATATGAAGGAGAATTTAAAAAATGACAAAATTAATGAAGAATTTT
GTAAATTAAATAGCGAAAATGCATTACTGAAGAAATTAAATGGAGAAATT
ACTATCAATGAATCAAAATTAAAAGATGAATTAAAATCGTTGAAAAAACA
CCTGGAAAATAATAAAATTAGAATTCAAGAATATCTAAAAGAAAAAGAAG
ATGGTTTAATATTAACCGAAGATTTAAACAAAGAATTGTTATTAAGTAGA
AATGAATTGAAGCATATGAAAATTAACGAAATAGAGATGAAAAACTCAAT
TTCGAAACTTTCCAACGATTATGATAATATATTGAATGAATTAGACAATT
TAAAGACGAATAAAAATATGAAAGATGATGAAAAATGTGATTTTTCTGAT
GGAATATATTTAAATAATGAATCAGTTGTAGTGGAGGCTTTTTATTTATC
AAAAGAAAGTGACAATTTAATCACAGAAAATAAAAATCCAAGTGGAAAAA
AATTGGAAGATATTGAGCATAAAATGGAAGTATTTGAAAAAGAAATCGAA
GGAAGTCATGCCACTATTAATTGCTTAAAGAATGAAAATAAATCTTTTAA
ACTGGAAATAGAGAATGCCAAGGAATTTAATAAAATAATAATAAAAGAAA
ATGAAAATTTAAAAGAACTTAAAGATAATTTTCTAATAGACCTCGAGAAA
AATAATAGAAATTTTAATTTATTGACAAATGAAAAAAAAGAGATGGAAAT
TTTGTTAGTGGTAATGAAAGAAGAAAATATGACATTGAAAACAGAAGCTA
TGGAAATGGAAAAATGTATGCTAATTTTGAAAGATGATATTTTTAAAAGT
ACTGAAGAAAAAAATAAGTTATTAAAGATGCTAAGCGATCAATCAGATCT
GATTAAGAAGATTGAAATGGAAAATGAAGAAAATAGTGTAAAATTAACTA
ATTTGATTGAAAAAAATGCATCATTATATGAACAACTGAGTCAGACAACA
ATTAACATAAAAGAGCTCAATGAAAATTTGAGTCGACTTCAAACCGAAAA
AAGTAATGTTATTAATGAATTGGAAAATGTTAAGGCTACAGTTTTGGTTT
ATCAAAAGGAAAAAGATGATAATTCTATTTTAAGAAATGATTTGAATAAT
GAAATAATAATATTAAAACATAAAGTAGCTGAAATGGTAAATTTTGAAGA
AACTCTCAAAGTCGATCTGCATATCGCTTCAGTGGACAGAAATCAAATCA
TGGACAGTTTTGAAAATATTAAAATAAAAGCTTCATTGCTTGAAAAAACA
CTAGAAGAGAATGGAATTTTACTTGCAACACTTGTTGAAAATTTAAGTCT
TAAAGTAACACATTTATCCGTAAACTTAGTGAAAATTACTGAGAAAACAG
ATAATATTATTGCAGAAAATGAAAATTCCAAGAAGATAATTATACATTTA
GAACAAGAGCAAAATAATAATGAAACAAAGTTTAATGAACAACTAAATTC
ATATAAGAATGAGCGAGATAAAATAACATCTGATTTGGAAGAAATGAGAA
GTAAATTAATCCAAATTGAAAAGAATAAAACAGATTTAGAGGTAAAATTA
ACAACTTTAACAGAGGAAAAATCATATTTAATCGAAAATGCTGAATTATT
AAATTCTTCGATAACAAAATATCAAAAAGAGATTGCAAATCACGTAAATA
TACAAAATACTTTAATGAAAGAATTAGAAGATGTAAAATATAAATTCAAG
ACGTTAGAGATCACGAGCAAAGAGGATGAAAAATTGCTTATTGATTTTAA
TAATGAAAATTCACTTTTAAAAGATAAATTTAATAAATTATTGAATGATG
GAAATGTTTCCACACAAAACCTTATTGTCATTGAAGAAGAAAAAAATAAT
ATTCTTAGTGAATTTGGAAACTTGAAACTTGAAATGGAAGGTGTTAAAAG
CTTATCAAATCAAAATGAAAATAAAATAAAACTACTTTTGGAAGAAAATG
TGATTCTGAAAAATAAATTTGAAAATTCGATAAATAGTGAAACTGAATTA
AAAGCCAATTTATTGACAATTATGGATGAAAATACAGTTTTATTAGAAAA
AATAGACATTTATCAAAAACAAATCAAAGAAAATGGTTTACTATCTGAAA
AATTACTTGAAGAAAACAGTTTTTTTAGAAAAGAAATTGAAAGTTTAACC
ATCAAAAACGACAGTTTAGAAGAAAATGTAGTCATTTTAACTGAAGAAAA
CGATATCAATGCAAAAGAATTGGAAAATTTGCTACAGAAACTTTTGAAAT
TAACGAAAGGAAACGAAGATAATGAAATCGTTTTAAAGAATTTTTCCGAA
AAAAATAAATCACTCAAACATATCATAAATGAATTAAATAAAATTGAAGA
AAAATTAAAAGAAGAAACCTTGAATGGTTTTAATCAGATAATGGACATCA
AAGATAACTTAATAATTAAAGAAAATGAAAAAGTACAACAAGATCGGGTG
ATTGGTAATTTAGAAAGTGAAGTTGCTAATTTAAATGAAAGTATTGAACA
TATACAAACTGAGAAATTTATGCTAAAAGAAATGATGCGTAGCATAATAG
AAGAAAAAGACAAGCTCTCGGAAGAATGTGGCAAGTTAGAAAAATCAACA
GAAGATAAGTTATCATTAATTCATAGTTTAAATGATCAAATAAACTTATT
TCAAAACGCTTGCTGAATCAAGTAATGAAGAGTTGAAGCTAAAAGAACAT
ATAGAAATGATCAAAAGTGAAAAAAATTCTATTTTTGAAAATTTAGAAAA
CGTTACTCAAAAGCTTTTCTTGCTAGAGAAAGAAAATCACGAAAAGGAAA
CCATATTAAAGGAAATGGAAAACATTAAAGTTCTTCATCTAAAAGAGACC
GAACAGCTAAATACTCAGATCACTGAATTGCAAGATGATTTAAAAACAAG
AGTACAAGAAAAAAGTGATTTAATGGGTGAAATAAAAGTTCTAAGAGGAA
ATTTAAGAACTTTTGAGCAAGAAAATCAAGATAACCTCTCATTGATAAAG
GATTTAAATCATCAACTAATAATGCTCAAAAAGATAGTGGAAGAATTGAG
TTGCAGTGAAGAATTTCTTAAGAAAGAAGTAGTGATTTTAAAAGACGAGA
AAACTAATTTGTCAAACGAGTTAGAAGTTTCATTCAATAAAATAATTACA
TTTTCAAAAATGAAGACAGCTGACGAATCTATGATACTGGAATTAAAAGA
ATCAATTCATAAATTACAGGATGCAGAATCTAAACTGAAATTGGAATATT
TGCAAATTGCCAATGAAAAAGAAAGTCTTTCTAAAGAATTAATAGATTTA
AAAAATCTAAAAGATGAAAAAGCAAGTATTGATAGAGAAAACCTCACAAG
TACCAGGAGTGGTGGTGTAATATCAACTGATGAAACAAATGGCGAAAAAG
AAATACAATCGGCATCTAACAAAGAGGTTCTTGAAAAGAATTATTTAGTT
CTTAAAGCTAAATTTCTAAAATTTAAAAAGCAGTCAGAAGAAAAAATAAA
TATCGTAACAAAAAAGAATGAAGAACTTTCGAAACTTGTATCAATTCAAC
AACCAAATCTAAAAAAAACCGAAGCACTGTCAAATATTACGAAAACGATT
GATTCGTTTTGTCAATGTAATATCATCGACTCTTCCTGGTCTTTCCAAGA
CATTCCAGTGATGTTAGATAGTCACAAAATTAATCCTGACGAAAAGTTTC
TTTATAATCAAATCGAGAATTTCTCCCATGAAGTCGATGCCAAAGTTCGA
AAGGTTAATTTTGAAATCGAAGAATTTCTTGAACGAAACGAACGAGTAAC
AAGTTTTTTGGTTTCAAAATCCAGTCCTGACCGAATTGGTTCCGGTCAAG
AGGCACAGTCTGAGAAATTGGCATCGAAAAACCGAGAACTTTCGTTGACA
ATTAAAGATTTACAAGAACAAAATCTATTGATGAAAAATAAAATCATTGA
TTTGTGCAATTGTTTAGAAAAAGAACAAGAACTTTATAAACAATTCAATG
AAGAAAAAATAATTTTGATTGACGATTTAACGAAAAAAATCAATTTAACA
ATCACTGAAAATTTTCAATTAAATCTACAAATAAATAATCATAAAGAGGA
ATTGAAATTGATTACAAAAGAAAAACAAAATCTTTCAGAAAAAATAACCA
ACTTGAAAGAAGTACTATCGAATTTGTCTGAGAAAGTCTCTAATTTATCG
ACGGAAAATTCCCAAATCACCGAAGACTATAGGTTATTAAAATTAAAAAC
AAACCAAGAACTCTATTCGAAACTCGAAAAGTTGCAATCAGAAATAAACC
TTTCTGAAATTGTGAATTCCCAAAACAAGACAAAAATAACTGAATTAGAA
AATTGCAAATTCGATCTGAAAAACGCGAACAAGAACCTGTCCAAAGAAAA
CAATGAAATCCGACAATCAACACAAGTTATCATTAATGAATTAATGGATA
AATGTCATAATCACGAGCTGGAAAATGCAATGCTAAATAGTAAAATCCTT
GAATTTGAAGAGACGAATAATAAAAATTCAAATCTCATTACATCTTTGCA
AGAAAGGATAAATAATTTTGAAATTTTTATTCAAACCAAACAAGAAAATG
TTTACTTGGATCATAAAATTTTCGAGTCGATTCATTCATTAAATGTTGAC
GTAGAGAATTTCCATTCAGAATTGTCAGAAATAATACCAATTAAACATTT
CAATGAAAACTTAGAAGTTCTTACGAAAACTAGTCTGTCCATTTACGAGC
AGCTTCATAGCTGTTTGACTAGGATATCCGATGTTGAAAACCAACTCCAA
GGTGTATTACATGATCGAAATGATCTCCAAATACAAATGAGACGTATGGA
GTTGGATCATTCGCAGATATTAGAAAATAAAGACAAGGAATTCTGTGAAC
TTAAAGAATTAATTTCTGAATATGAGTTTGCATTAAGCAATGAAAAATTA
ATCTCGAAGAATGGAACTGATTTTGAAAATTCTTTCCAACAAATGGAGCA
TGAAGAACCTGTGATTAATTATGAAACTTTACCTTTTCGTAAATCGAAAA
ATGAAACCGAACAAAAAATTCAAGTTCAAAATTATGTTCTAAATAAATTG
ACAGATACCTTTTCCATGAACACGTCGGAAATCCGAGGGGATTTAGAGAA
TGATTTTGAAAATAGTTTTGTAAATTATTTACAAATAATCAAAAACTCAA
TACCTCATCAATATTCCATAAAAGACATGAAAAACGTTGAAATACAAACG
GACATGGATTTGACATATCTACAGAAACTAGAAACGGAAATTACTCAATC
TCTCTATGAATGGCAAAATCTTAATGAGTTTTCAATAGCTAATGAATTAA
TACCGGAAGATTTTATCGGTAACATTATTTTGTACAATCGCGCAATGGAA
ATAATGAATGATAAAGTCATAAAACTGCAAAAGGATTTAGAAATCGAAGA
ACTTCAAAAATGTGAAATGAGTGATAAATTTGAGCAAATAATCACCGAAT
TAGAGTCGGCGTGCGATGCTGAAGTTGAAAAATTAAAACTGAACAATGAG
TTCTTAAAACAAGAACTCGAGTTTTTAAAGTGTGAACGTGAAGAACAAAA
CAGTAGCATGAATTTGTTGAAGAATCAGATTTTCTCTTTACAATTAGAAT
CGACAAGACAGAATTTAGATTTCGATACAAACCACTTAATAGATGCGGCT
GTTGATACAAATGAAGGAGATCTTTCATGGATGAGCAATTTGAATGATGC
TTTAAAGCAAACAATATCAGAAAAAGAAGATCAAGTTACAGAGTTGATGA
AAAAACTGAATGAATCTATTAGTAAATTGAAGGAAGCCAAGCTTCAAGAA
GAATCTTGCCGCTTAGAAATACAAAATCTTAACGAAAAGCTGAACGTGAT
ATGCGAAGAAATAAAATTAAAGGATAGATCAATACAAGATAATTTTGAGG
TTATAAATGAGTTGGAAGTCATTTGTATTGAAAAAGAAAACAGAGTTAAT
TCATTGGAGAAAGAACTTGCGGATATCAATAGCCAATTAGAACAATATAT
TTCAGCAGTTTGTTCCATGCAAGCACGGTTGGAAGCATCTAAACCCAACA
TTGAGTCAATGCTGAATAAGATTGGAAGTCGTTCAAATAACCTTCAATTG
TTGAACCTCATTGACCAATTGGAAAAGGACTACGCAGACGAATTAGAGCA
ATCGGAAATTGCTAAATCAAAAATAGAATTGAAATTAAATAAAGCTATTC
AAGTGATAAATAAATTAAAGAAGCAACTGAAACAGTCTCATGCTCGTGTT
TTGAATTTGAATGACGAAATTAAATCTTTAAAAACCCCTGATCCATTTCA
TAAAATTCTCGAGGAAAAAGAGTGCCATATTGAAAAGGATTCAACAACTG
TTGATGTTTCAACTCAAACAAATTTTGAACTCGACAATATTGCTCTTTGT
AAAGAAGAAAATGTTGATTTAAAGGGATTAATGGAAAATTTGAATGTAAA
TAATTTTATTTTGTTGAGAGAATTGGATAAAATGCAAAATAATGATAGAA
CTTCTCGAGGATCGTCCTTGCCACCAACATCAACTGGATCCCTACATACT
GGAAAAGGTTTTCATGTCGGAAGCGAGCGCTCACTATCCCCAGTTTCTCA
GATTTCATCGAATTCTTTTGATGGTGGAGACTCAATAAATCTTAATCAAA
TCAAAGATTTACAAAGAAAACTTCAGCGAACTAATCAACAACTGAATCAA
ATGAGAATCGAAAGAAATAGAATTCACCAAGAATATACTCGAATTAGACA
AATGAAAGAGGAGGCAGATCAGAAAGCTTTAGAATTGTCGAGACTTATTG
ATAGTAATTTAAATCAAGATGATATTTTGCATGAAAAAGATCAACTAATT
GAAATGAATAATAAATATTCTGTGACAATTGTGGAATTAAAGGCTGAAAC
CGAAATGACAAATGTTCGTAATTCCATTTTAGAAACGAAATGCAAAAAGA
TGGAATGGAAACTTAATAATCAGCGTCGAAAATATGATCAGTTGATATTG
AAATTAGACGAAAAAGAACAGGATATCGATAACATTTCCGATGAGTTACG
GAAAAATCTGTCAATTTTTGAAAAAGAGCGAATAGATTGGTTAAAAGAAA
GAAAAGAACTGAAATTGTTAAATAAAAATAAAGATAACAAAATTGTGGAA
TTTAGAAAAAAGTTGTCTAATAAAACTAATGAAACAACTGAAAATACTGA
AAATGATTACATCATAGAAATAGAACAGCATAAAAATCAAATAAGCCAAT
TAAAACAGGAAAACAAACAATCTCTCGCTCAACACCGTGAAGAAATAAAT
AAGTATAAAGGACAGTTGGAAGAACTAATTGACGATAATAAGCAACTGAA
AAGGAAATTGACTTTAGATCAAAAGGATAATAAAATGTTTTTTGTTGAAA
ATAGAGTAAACAATCCTTTGATGCATATTATCGATGAGGTTTCAGAGACT
TCAGATTCATTATGGAGTAGTAACCCAGAGTCCAATGCTATTCTTGCTAA
AGTTGTCTTAGAGAAAGAACATTTACTGTGTCAGTTATCGGAAACAGAGA
AGCAACTGAATGATGAAAAACAAAAATCTTCTGAATATCAGTTTAAAACC
AGCATTTTAAATGAATCAAAAATTGTCAATTCGATTTCTCAGTTTACTCA
ATATGAAGAATTGTTTAGTAAAAATAATAATAATACTAATTTAAAATGCG
GTGAAACGCAAACTTACAGTTCTCACCATCCCATTCATCAGTCCACGGAA
ACTTCTGAGAATTATGAATTAGAAAAAATTAAACAGATTAATTCAATTAT
GACGAAAAATGATGTTAATCAAAATATACAAACAGAACACAATTTTGATA
AAGAAATCATAAATAATTATCGATTGGCACTAATTAATCGATTGAATATT
CACAAGTATCCCCAAATTGAATGCACTGATTTACCGGTTAAGGTTGAAAT
TGGAGTCCAAACCGACCCGACTTTAAATTCATCGACTTACCATGTCATTC
ATCAGTCCAGATCGGAAGA
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protein sequence of SMED30020634-orf-1

>SMED30020634-orf-1 ID=SMED30020634-orf-1|Name=SMED30020634-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1425bp
MIQVMQRHENQIINMFNEIETKTEQSDVDQMVKILKDQIANLREALIDKQ
QSLKIANDKLEAQDQIMRKLQETNLDLEEQVKRYEQKYYTDQTYQKHIET
LNDTLKENKKKQLTFKAKAKSLEKQLASLKTLNDDKEKQLNSELLIRDEI
IVKQNILIDELRQTENSLRQSLNRSIAIQEEQILELKYWENFNNLLPSFD
FKDSYDSFSTEPLSMAIENLESLCSLKSKKKMQELQNTIKELCQYRTTID
QQNKYFRHLENQIKLLKNCVTNVNKFNIILNKHIGVLAQDYQQFYQSLKD
FDGEIMNFSSENLDQCSKSELIKKIIIISNQMSGHSNSFLDLENENLRLN
LEINKIMEVCSAMSLKIDNTYQEIESFLLTKNDNFNKLNFIEKPNDQTES
SYVEKIFQIIIERNLQIRIEVQQKNNEEFQKLNKINENLNFQVKNLLLKL
DENEIISNNKTDESEKFSREFEEVKCEIVLLEDQRENNRSIISDLTNENS
SLKVELENLGDQLLRTTNENINMKENLKNDKINEEFCKLNSENALLKKLN
GEITINESKLKDELKSLKKHLENNKIRIQEYLKEKEDGLILTEDLNKELL
LSRNELKHMKINEIEMKNSISKLSNDYDNILNELDNLKTNKNMKDDEKCD
FSDGIYLNNESVVVEAFYLSKESDNLITENKNPSGKKLEDIEHKMEVFEK
EIEGSHATINCLKNENKSFKLEIENAKEFNKIIIKENENLKELKDNFLID
LEKNNRNFNLLTNEKKEMEILLVVMKEENMTLKTEAMEMEKCMLILKDDI
FKSTEEKNKLLKMLSDQSDLIKKIEMENEENSVKLTNLIEKNASLYEQLS
QTTINIKELNENLSRLQTEKSNVINELENVKATVLVYQKEKDDNSILRND
LNNEIIILKHKVAEMVNFEETLKVDLHIASVDRNQIMDSFENIKIKASLL
EKTLEENGILLATLVENLSLKVTHLSVNLVKITEKTDNIIAENENSKKII
IHLEQEQNNNETKFNEQLNSYKNERDKITSDLEEMRSKLIQIEKNKTDLE
VKLTTLTEEKSYLIENAELLNSSITKYQKEIANHVNIQNTLMKELEDVKY
KFKTLEITSKEDEKLLIDFNNENSLLKDKFNKLLNDGNVSTQNLIVIEEE
KNNILSEFGNLKLEMEGVKSLSNQNENKIKLLLEENVILKNKFENSINSE
TELKANLLTIMDENTVLLEKIDIYQKQIKENGLLSEKLLEENSFFRKEIE
SLTIKNDSLEENVVILTEENDINAKELENLLQKLLKLTKGNEDNEIVLKN
FSEKNKSLKHIINELNKIEEKLKEETLNGFNQIMDIKDNLIIKENEKVQQ
DRVIGNLESEVANLNESIEHIQTEKFMLKEMMRSIIEEKDKLSEECGKLE
KSTEDKLSLIHSLNDQINLFQNAC*
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protein sequence of SMED30020634-orf-2

>SMED30020634-orf-2 ID=SMED30020634-orf-2|Name=SMED30020634-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1787bp
MIKSEKNSIFENLENVTQKLFLLEKENHEKETILKEMENIKVLHLKETEQ
LNTQITELQDDLKTRVQEKSDLMGEIKVLRGNLRTFEQENQDNLSLIKDL
NHQLIMLKKIVEELSCSEEFLKKEVVILKDEKTNLSNELEVSFNKIITFS
KMKTADESMILELKESIHKLQDAESKLKLEYLQIANEKESLSKELIDLKN
LKDEKASIDRENLTSTRSGGVISTDETNGEKEIQSASNKEVLEKNYLVLK
AKFLKFKKQSEEKINIVTKKNEELSKLVSIQQPNLKKTEALSNITKTIDS
FCQCNIIDSSWSFQDIPVMLDSHKINPDEKFLYNQIENFSHEVDAKVRKV
NFEIEEFLERNERVTSFLVSKSSPDRIGSGQEAQSEKLASKNRELSLTIK
DLQEQNLLMKNKIIDLCNCLEKEQELYKQFNEEKIILIDDLTKKINLTIT
ENFQLNLQINNHKEELKLITKEKQNLSEKITNLKEVLSNLSEKVSNLSTE
NSQITEDYRLLKLKTNQELYSKLEKLQSEINLSEIVNSQNKTKITELENC
KFDLKNANKNLSKENNEIRQSTQVIINELMDKCHNHELENAMLNSKILEF
EETNNKNSNLITSLQERINNFEIFIQTKQENVYLDHKIFESIHSLNVDVE
NFHSELSEIIPIKHFNENLEVLTKTSLSIYEQLHSCLTRISDVENQLQGV
LHDRNDLQIQMRRMELDHSQILENKDKEFCELKELISEYEFALSNEKLIS
KNGTDFENSFQQMEHEEPVINYETLPFRKSKNETEQKIQVQNYVLNKLTD
TFSMNTSEIRGDLENDFENSFVNYLQIIKNSIPHQYSIKDMKNVEIQTDM
DLTYLQKLETEITQSLYEWQNLNEFSIANELIPEDFIGNIILYNRAMEIM
NDKVIKLQKDLEIEELQKCEMSDKFEQIITELESACDAEVEKLKLNNEFL
KQELEFLKCEREEQNSSMNLLKNQIFSLQLESTRQNLDFDTNHLIDAAVD
TNEGDLSWMSNLNDALKQTISEKEDQVTELMKKLNESISKLKEAKLQEES
CRLEIQNLNEKLNVICEEIKLKDRSIQDNFEVINELEVICIEKENRVNSL
EKELADINSQLEQYISAVCSMQARLEASKPNIESMLNKIGSRSNNLQLLN
LIDQLEKDYADELEQSEIAKSKIELKLNKAIQVINKLKKQLKQSHARVLN
LNDEIKSLKTPDPFHKILEEKECHIEKDSTTVDVSTQTNFELDNIALCKE
ENVDLKGLMENLNVNNFILLRELDKMQNNDRTSRGSSLPPTSTGSLHTGK
GFHVGSERSLSPVSQISSNSFDGGDSINLNQIKDLQRKLQRTNQQLNQMR
IERNRIHQEYTRIRQMKEEADQKALELSRLIDSNLNQDDILHEKDQLIEM
NNKYSVTIVELKAETEMTNVRNSILETKCKKMEWKLNNQRRKYDQLILKL
DEKEQDIDNISDELRKNLSIFEKERIDWLKERKELKLLNKNKDNKIVEFR
KKLSNKTNETTENTENDYIIEIEQHKNQISQLKQENKQSLAQHREEINKY
KGQLEELIDDNKQLKRKLTLDQKDNKMFFVENRVNNPLMHIIDEVSETSD
SLWSSNPESNAILAKVVLEKEHLLCQLSETEKQLNDEKQKSSEYQFKTSI
LNESKIVNSISQFTQYEELFSKNNNNTNLKCGETQTYSSHHPIHQSTETS
ENYELEKIKQINSIMTKNDVNQNIQTEHNFDKEIINNYRLALINRLNIHK
YPQIECTDLPVKVEIGVQTDPTLNSSTYHVIHQSRSE
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000484secretory system
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR006588Peptide_N_glycanase_PAW_dom
Vocabulary: biological process
TermDefinition
GO:0006516glycoprotein catabolic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: molecular function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 709..771
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableCOILSCoilCoilcoord: 1305..1328
NoneNo IPR availableCOILSCoilCoilcoord: 464..484
NoneNo IPR availableCOILSCoilCoilcoord: 1004..1059
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableCOILSCoilCoilcoord: 620..647
NoneNo IPR availableCOILSCoilCoilcoord: 492..526
NoneNo IPR availableCOILSCoilCoilcoord: 1354..1374
NoneNo IPR availableCOILSCoilCoilcoord: 32..87
NoneNo IPR availableCOILSCoilCoilcoord: 557..584
NoneNo IPR availableCOILSCoilCoilcoord: 1274..1294
NoneNo IPR availableCOILSCoilCoilcoord: 1242..1269
NoneNo IPR availableCOILSCoilCoilcoord: 821..883
NoneNo IPR availableCOILSCoilCoilcoord: 412..432
NoneNo IPR availableCOILSCoilCoilcoord: 1382..1402