asic
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020592 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of asic vs. Ensembl Celegans
Match: unc-105 (Degenerin-like protein unc-105 [Source:UniProtKB/Swiss-Prot;Acc:Q09274]) HSP 1 Score: 51.2174 bits (121), Expect = 2.049e-6 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3 Query: 900 YSG---SYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIV 1475 Y+G S + C + +Q+ V+ C C + P+ + + C +A + +C+ NT E K + C ++P C + Y++ + W S + + E + +L +EK + N + I + + + +E Y + +L+D+GGL GLW+G SV+ L EIV Sbjct: 505 YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPC-------QAVNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQP--CQETNYEVTYSSA----RW-PSGSAKVMECLPGDFL-----------CLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIV 675
BLAST of asic vs. Ensembl Celegans
Match: unc-105 (Degenerin-like protein unc-105 [Source:UniProtKB/Swiss-Prot;Acc:Q09274]) HSP 1 Score: 51.2174 bits (121), Expect = 2.049e-6 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3 Query: 900 YSG---SYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIV 1475 Y+G S + C + +Q+ V+ C C + P+ + + C +A + +C+ NT E K + C ++P C + Y++ + W S + + E + +L +EK + N + I + + + +E Y + +L+D+GGL GLW+G SV+ L EIV Sbjct: 505 YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPC-------QAVNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQP--CQETNYEVTYSSA----RW-PSGSAKVMECLPGDFL-----------CLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIV 675
BLAST of asic vs. Ensembl Celegans
Match: unc-105 (Degenerin-like protein unc-105 [Source:UniProtKB/Swiss-Prot;Acc:Q09274]) HSP 1 Score: 50.8322 bits (120), Expect = 2.218e-6 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3 Query: 900 YSG---SYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIV 1475 Y+G S + C + +Q+ V+ C C + P+ + + C +A + +C+ NT E K + C ++P C + Y++ + W S + + E + +L +EK + N + I + + + +E Y + +L+D+GGL GLW+G SV+ L EIV Sbjct: 485 YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPC-------QAVNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQP--CQETNYEVTYSSA----RW-PSGSAKVMECLPGDFL-----------CLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIV 655
BLAST of asic vs. Ensembl Celegans
Match: unc-105 (Degenerin-like protein unc-105 [Source:UniProtKB/Swiss-Prot;Acc:Q09274]) HSP 1 Score: 50.8322 bits (120), Expect = 2.218e-6 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3 Query: 900 YSG---SYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIV 1475 Y+G S + C + +Q+ V+ C C + P+ + + C +A + +C+ NT E K + C ++P C + Y++ + W S + + E + +L +EK + N + I + + + +E Y + +L+D+GGL GLW+G SV+ L EIV Sbjct: 485 YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPC-------QAVNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQP--CQETNYEVTYSSA----RW-PSGSAKVMECLPGDFL-----------CLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIV 655
BLAST of asic vs. Ensembl Celegans
Match: unc-105 (Degenerin-like protein unc-105 [Source:UniProtKB/Swiss-Prot;Acc:Q09274]) HSP 1 Score: 50.8322 bits (120), Expect = 2.442e-6 Identity = 45/196 (22.96%), Postives = 83/196 (42.35%), Query Frame = 3 Query: 900 YSG---SYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIV 1475 Y+G S + C + +Q+ V+ C C + P+ + + C +A + +C+ NT E K + C ++P C + Y++ + W S + + E + +L +EK + N + I + + + +E Y + +L+D+GGL GLW+G SV+ L EIV Sbjct: 543 YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPC-------QAVNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQP--CQETNYEVTYSSA----RW-PSGSAKVMECLPGDFL-----------CLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIV 713
BLAST of asic vs. TrEMBL
Match: S5W2R2 (Asic OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 1024.62 bits (2648), Expect = 0.000e+0 Identity = 494/495 (99.80%), Postives = 494/495 (99.80%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFY 1487 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEF Y Sbjct: 1 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFVY 495
BLAST of asic vs. TrEMBL
Match: A0A5J4NUF1 (Uncharacterized protein OS=Paragonimus westermani OX=34504 GN=DEA37_0013022 PE=3 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.261e-86 Identity = 173/526 (32.89%), Postives = 275/526 (52.28%), Query Frame = 3 Query: 12 LIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKS-RIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFL--PIFKNSSGFPR---LCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNR-CKMYRPIPCNKVLYKI-DHRKEILVDLWSKSTNDRRREIIKTLYLKTFQT----------------------NETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLM 1499 L++ ST+HG+ H+ +A K+ ++ W L L G+ N+ FI ++L+ PV+ SY E+E FIWPDIT CN PY+ ++ + W N+ A K+ +S+ I S+ +N E+ + + S+ P + + ++ + ++G+ + E + T LN K F +Q++Q R N+PC+T L S V+ + S+ K N ESY+I NSSY + L+IS+ P + I + PGY + L +R R +CR + + E++D L + + +GS C +IVSQ Y+ C+CY+ FL P+ N F + LC N S FS A++ +NA CM+ + +Y S R C+ +R C+ V YK+ D R+ +V+LWS S N+ R + + + F + N++ ++ ++DN L +NR +E G+L +EE EYP SEL+SDVGGLMGLW+G+SVIGLFEIVE +M Sbjct: 30 LLEHSTVHGLSHVSTAATKLGRITWFCLLLAGIAGFFTNLSFIIDRYLTRPVLTSYISEYEGFIWPDITLCNAMAPYSLHLHGR-IPKWQALRNQASAFAQKL--NSSLFASIDSQDQN--EIAIQALMYSTLSPPEYGVGEPEEFIQFVATDVGYQGIILTVEISGNMTHLNPPLKKYFHTQVLQKRYNVPCYTLQLRHSLTAVQSNQVNSIGLGVKFNVESYRIINSSYASPYIDLFISHPGHAPHDDPIEMLPGYTLSLSLRMSRLRREPARLSCRTDFYTTEVFDPDLVTKRRVNGSATFCHRIVSQHLYLNSCHCYSPFLPYPVVYNHKLFSKMAILCFNMSRFSVAQINRNADCMLRIYERYQLSSVYNSVPEARACEQFRKPLCDDVEYKLSDIRRTAMVELWSNSYNEARIAFLTSSFQNLFSSDIPPEQLVSWLDSDTKDDNTKDNDSMPKILKYMRDNFGLLSVNRKSELGELVREELEYPLSELMSDVGGLMGLWIGISVIGLFEIVELCGFAIM 550
BLAST of asic vs. TrEMBL
Match: A0A504YRR8 (Degenerin unc-8 OS=Fasciola gigantica OX=46835 GN=FGIG_05554 PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 2.467e-80 Identity = 162/527 (30.74%), Postives = 270/527 (51.23%), Query Frame = 3 Query: 12 LIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQ-KFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFL--PIFKNSSGF---PRLCLNASIFSEAEVLKNAKCMINTFRKYAES----DKARRRFYNRCKMYRPI-PCNKVLYKIDH-RKEILVDLWSKSTNDRRREIIKTLYLKTF---------------QTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFS 1511 L++ ST+HG+ H+ +A+ +I + +W IL++ GV N+ FI ++++ PV+ SY +HE FIWPDIT CNP PY +N++ E N ++A V+R S + E+ + + S+ P + A ++ + K G++ + E ++ T L+ F Q++Q R NIPC+T LD+ ++ K + K N +S I NSSY ++ L+IS +P+ + + GY++ V +T R + R CR E+F +++D+ L++ + GS D C K++SQ+ Y+ +C CY+ FL P+ P LC N S F+ + + +NA+CM + ++ E + F C+ +R PC + Y ++ R+ +++ W+ + N+ R + + + F N +SL F +++N + I R G L EE EYP SELLSDVGGLMGLW+G+SVIGLFE+VE F + + S Sbjct: 34 LLEHSTVHGLSHVSTASTRIGRSVWLILWMAGVAGFFTNLSFIVSRYMTRPVLTSYKHDHELFIWPDITLCNPMAPYPVHLNNRS-----EKWNLLHQLATAVSRNISGNLFATIDEAEQEEVTVQALIHSTVSPMEFGANDPHELVHFVAVDKGQTGIHLTIEMDATFTNLDIPKHRYFHVQVLQKRYNIPCYTLRLDQVLNEEECASTKQVSLGLKFNHDSNLIINSSYAPFNIDLFISLPGHMPEDEPMEILSGYSHKVTVTMGRFTRERTRLPCRTEQFVTQVFDADLKTQREVVGSADFCLKLLSQRLYIDHCGCYSPFLPYPVMGQDHPLYQHPVLCFNMSHFNASGIDRNARCMYEVYTQFKEDFIYMNLPEAGF---CETFRATPPCESINYVLESPRRTPIIEFWADTVNEARSAFVTSTFESVFGQDLPEERLKQMVNNSGNTSSLLFY--MRNNFGLVKITRKLPRGTLTHEELEYPLSELLSDVGGLMGLWVGISVIGLFEVVELFAFVGLTVIS 550
BLAST of asic vs. TrEMBL
Match: A0A183A5V1 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS2336 PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 8.867e-80 Identity = 162/524 (30.92%), Postives = 267/524 (50.95%), Query Frame = 3 Query: 12 LIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKS---LLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSS-----GFPRLCLNASIFSEAEVLKNAKCMINTFRKYAE-SDKARRRFYNRCKMYRPI-PCNKVLYKIDH-RKEILVDLWSKSTNDRRREIIKTLYLKTFQTN-------------ETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFS 1511 L++ ST+HG+ H+ +A+++I + +W IL+L GV N+ FI ++++ PV+ SY +HE FIWPDIT CNP PY + ++ E N+ + A +VA+ S E+ + + S+ P + Q + + K G++ + E S+ T L+ F +Q++Q R+NIPC+T L + ++ Q+ S + K N +S+ I NSSY +++ L+IS P+ + L GY + V ++ R R CR ++F A+++D+ L++ + GS D C K+VSQ+ Y+ C CY+ FLP G P LC N S F+ + +NAKCM + + +Y + S C+ +R PC Y + R+ +++LWS + N+ R + + + F + + + +++N + I+R G L EE EYP SELLSD+GGLMGLW+G+SVIGLFE+VE + + S Sbjct: 33 LLEHSTVHGLSHVSTASSRIGRSIWLILWLAGVAGFFTNLSFIVSRYMTRPVLTSYKHDHESFIWPDITLCNPMAPYPVHLRNR-----TEKWNELRLRATRVAKNISEDLFAAIDDAEQLEIAIQALLYSTISPEQFGVGEPQELIQFVAADKGRSGIHLTVEMYSTFTDLDAPKTQYFHAQMLQKRHNIPCYTLQL--AHVLSQEDCLSTNQVSLGLKFNHDSFLIINSSYAPRNIDLFISLPGHFPEDESMELLSGYTHKVSVSMTRFIREPNRLPCRTDEFVAQMFDANLKTRREIVGSADFCHKLVSQRLYINNCGCYSPFLPYPVVDEHLLVHGQPVLCFNMSHFNITSIDQNAKCMYDVYTQYHDHSVYMNLPEAQYCETFRSTPPCESTSYMPESLRRTPIIELWSDTINEGRTAFLTSTFESVFGPDLPEERIRQLLNNSGNNSNMFTYMRNNFGMVTISRKFPRGTLTHEELEYPLSELLSDLGGLMGLWIGISVIGLFEVVELLAFVSLSMIS 549
BLAST of asic vs. TrEMBL
Match: A0A4E0RSD9 (Degenerin unc-8 OS=Fasciola hepatica OX=6192 GN=D915_000009 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 9.545e-80 Identity = 162/529 (30.62%), Postives = 270/529 (51.04%), Query Frame = 3 Query: 12 LIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQ-KFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFL--PIFKNSSGF---PRLCLNASIFSEAEVLKNAKCMINTFRKYAES------DKARRRFYNRCKMYRPI-PCNKVLYKIDH-RKEILVDLWSKSTNDRRREIIKTLYLKTF---------------QTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFS 1511 L++ ST+HG+ H+ +A +I + +W IL++ GV N+ FI ++++ PV+ SY +HE FIWPDIT CNP PY +N++ E N ++A V+R S + E+ + + S+ P + A ++ + K G++ + E ++ T L+ F Q++Q R NIPC+T LD+ ++ K + K N +S I NSSY ++ L+IS +P+ + + GY++ V +T R + R CR E+F +++D+ L++ + GS D C K++SQ+ Y+ +C CY+ FL P+ P LC N S F+ + + +NA+CM + + ++ E +A C+ +R PC + Y ++ R+ +++ W+ + N+ R + + + F N +SL F +++N + I R G L EE EYP SELLSDVGGLMGLW+G+SVIGLFE+VE F + + S Sbjct: 34 LLEHSTVHGLSHVSTAGTRIGRSVWLILWMAGVAGFFTNLSFIVSRYMTRPVLTSYKHDHELFIWPDITLCNPMAPYPVHLNNRS-----EKWNLLHQLATAVSRNISGNLFATIDEAEQEEVTVQALIHSTVSPMEFGANDPHELVHFVAVDKGQTGIHLTIEMDATFTNLDIPKHRYFHVQVLQKRYNIPCYTLRLDQVLNEEECASTKQVSLGLKFNHDSNLIINSSYAPFNIDLFISLPGHMPEDEPMEILSGYSHKVTVTMGRFTRERTRLPCRTEQFVTQVFDADLKTQREVVGSADFCLKLLSQRLYIDHCGCYSPFLPYPVMGQDHPLYQQPVLCFNMSHFNASGIDRNARCMYDVYTQFKEDFVYMNLPEA-----GYCETFRATPPCESINYVLESPRRTPIIEFWADTVNEARSAFVTSTFESVFGQDLPEERLKQMVNNSGNTSSLLFY--MRNNFGLVKITRKLPRGTLTHEELEYPLSELLSDVGGLMGLWVGISVIGLFEVVELFAFVGLTVIS 550
BLAST of asic vs. Ensembl Nematostella
Match: EDO34532 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SP23]) HSP 1 Score: 47.7506 bits (112), Expect = 7.311e-6 Identity = 33/130 (25.38%), Postives = 62/130 (47.69%), Query Frame = 3 Query: 9 DLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFIS----MKFLSNPVI--ISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYEL 380 D S+T HGIG +F+A + + + LW L+G + + ++F+ +++L PV+ + ++E E ++P +T CN LN K KVA+ S+ L+ + +E D ++ Sbjct: 65 DFAASTTAHGIGKVFAADSMVRRALW----LLGCLTVYAVMIFMCAQLLVRYLEKPVVSRVEVSYE-ESLVFPAVTICN--------------------LNMLKH--SKVAKNPSIQSLMTNMKEKDEKM 167
BLAST of asic vs. Ensembl Nematostella
Match: EDO36191 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJB5]) HSP 1 Score: 47.7506 bits (112), Expect = 8.328e-6 Identity = 50/187 (26.74%), Postives = 73/187 (39.04%), Query Frame = 3 Query: 984 PIFKNSSGFPRLCLNASIF---------SEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQ--TNETSLDFVEKVKDNIMQLIINRDNESGDLYKEE--RE-------YPFSELLSDVGGLMGLWLGLSVIGLFEIVEFF 1484 P S+G + C+++ + +E + KC+ N +KY C P PC + R+ I WS S Y KTFQ ++ F K+ D I+ ++ LY EE RE YP LL DVGG +GLW+G+SVI E ++ Sbjct: 291 PGVSASAGIRQGCMSSCLANNQFKVCNCTEGKFRAKVKCLNNISKKYENGSLG-------CSKSCPQPCTHYSF----RRTISQTQWSDS------------YEKTFQRLVRKSDRGFANKMND---ASILRKNFLRVKLYYEELNRETITYSLSYPVENLLGDVGGQLGLWIGVSVITCAEFLKLL 451
BLAST of asic vs. Planmine SMEST
Match: SMESG000011523.1 (SMESG000011523.1) HSP 1 Score: 1089.72 bits (2817), Expect = 0.000e+0 Identity = 526/526 (100.00%), Postives = 526/526 (100.00%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFSLGKKDDLLTDEMEQKDQVVQSSI 1580 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFSLGKKDDLLTDEMEQKDQVVQSSI Sbjct: 1 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFSLGKKDDLLTDEMEQKDQVVQSSI 526
BLAST of asic vs. Planmine SMEST
Match: SMESG000020604.1 (SMESG000020604.1) HSP 1 Score: 749.199 bits (1933), Expect = 0.000e+0 Identity = 358/527 (67.93%), Postives = 446/527 (84.63%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSS-TKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFSLGKKDDLLTDEMEQKDQVVQSSI 1580 MIDLIQSSTIHGIGHI+SA K+ K LWCILFL GV+ IIVNIVF+SMKF SNPVIISYTFE+EPFIWPDITFCNPTDPYAF I+S+PYL+WI+TLN+TK +A +V R++ +SQ+IHS+ +ND+ELEERTIAMS+ADP KL A FQNYL RIGY+KAH+GLYFSKE+QSSS +K +E+ K LFTSQ +Q+RNNIPCHTFHLDKSR + Q+ I+SL+FRFK NE+SYK+FNSSYTFQS+FLYI+NK+EIP NEIILTPGYNN+VQLTQNR+ + G+RR CR ++++ ELY++LLQSTE + G++DDC +I SQ+ YV+ C+CY+ FLPI+KN SGFPRLCLNASIFS +E+L N KC+I+T+ + + K + ++Y+ C+ Y+PIPC ++ YKIDHRKE+LVDLWSKS NDRR I+K +Y F+TNETS DFV KVKDNIMQLIINRD+E GDL+KEEREYPF+ELLSD+GGLMGLWLGLSV+GLFEIVEF YLFL G+F+ G K L + + + + ++I Sbjct: 1 MIDLIQSSTIHGIGHIYSAPGKVSKGLWCILFLFGVVGIIVNIVFVSMKFFSNPVIISYTFEYEPFIWPDITFCNPTDPYAFEIDSEPYLYWIKTLNQTKPIAERVFRESEISQVIHSQNDNDFELEERTIAMSTADPEKLGANGFQNYLTRIGYVKAHRGLYFSKEYQSSSPSKFSENLKPLFTSQTIQIRNNIPCHTFHLDKSRFLSQRRIRSLIFRFKFNEKSYKMFNSSYTFQSIFLYINNKNEIPIENEIILTPGYNNIVQLTQNRYVHNGMRRPCRTKEYKVELYEALLQSTETFFGNFDDCNQITSQRMYVENCHCYSPFLPIYKNESGFPRLCLNASIFSLSEILNNTKCLIDTYNDFQSAPKIKAKYYSECREYKPIPCERISYKIDHRKEMLVDLWSKSANDRRLGIVKQIYYHVFETNETSSDFVHKVKDNIMQLIINRDSEYGDLFKEEREYPFAELLSDIGGLMGLWLGLSVVGLFEIVEFLYLFLKGVFNFGHKMIPLANHVAGAEHEMINAI 527
BLAST of asic vs. Planmine SMEST
Match: SMESG000069054.1 (SMESG000069054.1) HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0 Identity = 267/498 (53.61%), Postives = 378/498 (75.90%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQSSSTK-LNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLF 1493 MI+L++SSTIHGI HI+SA K+ K LWC+LF+ G+I IIVNI F+S+++ S PV+ISYTFEHEPF+WPDITFCNPT P+ S+ Y +W++ N+++ V + ++T + Q+I +E D+ELEERTIAM+S++P KL A F+N++ +GY + H G+YF+K+ Q+++ K D K LF++QIVQ++NNIPCHTFH+ KS I+ ++SL+F + N +SY+IFNSSYT +S+FLYISN+DEI Q I L+PG+NN++ L+QNRH Y GLRR CR++ F+ E+YD+L Q+ + + GSY+DCK+IVSQ+ +V C CY+ FLPIFKN +GFPRLCLNA+ FS+ ++L+NAKCM+N + + +S R+ + N+C +++ C+ + Y++D RK++LV+LWSK N +R IK ++ F NE+ DF E ++DNI+ LII R E DL+KEEREYPFSELLSD+GGLMGLWLG+SV+GLFEI+EFFYLF Sbjct: 1 MIELVKSSTIHGINHIYSANGKLAKFLWCVLFIFGIIGIIVNICFVSIRYFSYPVLISYTFEHEPFVWPDITFCNPTAPFYLDRKSKAYKYWMQINNQSRDVVKMLVKETKLFQIIRESKETDFELEERTIAMASSNPVKLGADLFENHVKFVGYTRPHSGIYFNKDIQNNNPKTFPGDLKPLFSTQIVQIQNNIPCHTFHMHKSNILNPNSVQSLVFGLRFNYDSYEIFNSSYTTRSIFLYISNRDEIQQDQNIFLSPGFNNILSLSQNRHHYNGLRRKCRHKTFKFEVYDALFQNVKTFEGSYEDCKQIVSQRLFVDKCKCYSPFLPIFKNQTGFPRLCLNATFFSKTKLLENAKCMVNVYENFKKSGNFRKHYNNQCLIFKLHKCDLLSYQMDLRKDMLVELWSKVYNGKRLNSIKFMHSYYFGKNESKKDFNEVMRDNIVDLIIERKFEYSDLFKEEREYPFSELLSDIGGLMGLWLGMSVVGLFEILEFFYLF 498
BLAST of asic vs. Planmine SMEST
Match: SMESG000017678.1 (SMESG000017678.1) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 261/518 (50.39%), Postives = 362/518 (69.88%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGYIKAHKGLYFSKEFQS-SSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGIFSLGKKDDLLTDEMEQ 1553 MI+++QSSTIHG+ HI A ++I KVLW LF+ G+I I VNIVF+ +K+ SNPV+IS+ +HEPFIWPD+TFC PT PY F NSQ Y HW +T+R+ ++A +T + ++I+ +R DYELEERTIAMSSADP KL+ F+ ++ I + K +G+Y+ + + T ED K LFT+ +VQ+RNNIPC TFH+DKS+ + Q IKS+ F K N ESY +FNSSY +S+FLYI+N++ IP NEI+L PG+NN+V L+Q+R+ Y G+ R CRN+ FE ELYD LLQST + G YDDCKK+ SQ+ +V C CY+ FLPI+KN +G PR+CLNA+ +SE E+++NAKCM + + K+ R + +C+ YR I CN+V YKI+ KE+ V+ WS TN RR E++K + + + ++ E+++DN + + INR+ + GDLYKEE EYPFSELLSD+GGLMGLWLG+SV+GLFEI E YL+L + K ++ EQ Sbjct: 1 MIEILQSSTIHGVSHIHGAKSQITKVLWIFLFIFGIIGIFVNIVFVIIKYFSNPVLISHKLDHEPFIWPDVTFCKPTAPYYFGENSQAYTHWSHVFWRTRRIVERLANETEVFKIINGKRNTDYELEERTIAMSSADPYKLKTNDFRYHIMAIYFNKMQRGIYYHIDNSGIAVTSFAEDLKPLFTAPLVQIRNNIPCFTFHIDKSKFLNQNQIKSISFYLKFNLESYLLFNSSYLHRSVFLYITNRNGIPHKNEILLAPGFNNIVSLSQSRYEYRGVLRKCRNKIFETELYDGLLQSTSTFEGHYDDCKKVESQKLFVGICKCYSPFLPIYKNETGPPRICLNATFYSEDEIVRNAKCMTDVYTKFQSYKAFRNHYRLKCQDYRFIKCNEVKYKIEKDKELFVEFWSGLTNQRRNELLKKVSYYLMEKFDIK-NYFERMRDNFIGITINREFQKGDLYKEEYEYPFSELLSDIGGLMGLWLGMSVVGLFEIFELMYLYLKNLCYQTSKQQSNMEKFEQ 517
BLAST of asic vs. Planmine SMEST
Match: SMESG000069546.1 (SMESG000069546.1) HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0 Identity = 253/503 (50.30%), Postives = 351/503 (69.78%), Query Frame = 3 Query: 3 MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFLSNPVIISYTFEHEPFIWPDITFCNPTDPYAFTINSQPYLHWIETLNKTKRVAGKVARQTSMSQLIHSRRENDYELEERTIAMSSADPAKLQATAFQNYLYRIGY--IKAHKGLYFSKEFQSSSTKLNEDWKSLFTSQIVQMRNNIPCHTFHLDKSRIVKQKFIKSLLFRFKLNEESYKIFNSSYTFQSMFLYISNKDEIPQSNEIILTPGYNNVVQLTQNRHSYTGLRRTCRNEKFEAELYDSLLQSTEKYSGSYDDCKKIVSQQKYVKYCNCYNSFLPIFKNSSGFPRLCLNASIFSEAEVLKNAKCMINTFRKYAESDKARRRFYNRCKMYRPIPCNKVLYKIDHRKEILVDLWSKSTNDRRREIIKTLYLKTFQTNETSLDFVEKVKDNIMQLIINRDNESGDLYKEEREYPFSELLSDVGGLMGLWLGLSVIGLFEIVEFFYLFLMGI 1505 MI+++QSSTIHG+ HI A ++I K+LW ILF++G+I I VNIVF+ M++ SNPV+IS +HEPFIWPDITFC PT PY F NSQPY HW E +T+R+ +++ +T ++++ +R DYELEERTIAMSSADP KL+ F ++ I + I+ + EF + +ED K LFT+ +VQ++NNIPC TFH++KS+ + Q I S+ F N +SY +FNSS+ +S+FLYI+N++ IPQ E++L PG+NN+V L+QNR Y G++R CRN+ ++ ELYD+LLQST + G Y DC K+ SQ+ V C CYN FLPI+KN +G PR+CLNA+ +SE E+LKNAKCM+N RK+ RR F +C+ Y+ I CN+V YKI+ K + +L S T RRR++IK + K FQ + DF E+++DN + + I R+ GDLYKEE EYPFS+LLSD+GGLMGLWLG+SV+GLFEI E Y++ + Sbjct: 1 MIEILQSSTIHGVSHIHGAKSRITKMLWIILFILGLIGIFVNIVFVIMRYFSNPVLISRNLDHEPFIWPDITFCKPTAPYYFVENSQPYNHWTEVFRRTRRIVERLSNETEFFKIMNGKRNTDYELEERTIAMSSADPYKLKMDNFSYHIMLIVFNRIRTYTNYISDNEFFEN---FHEDLKPLFTAPLVQIQNNIPCFTFHINKSKSLHQDNITSIRFHLNFNIKSYMLFNSSFLHRSVFLYITNRNGIPQKYEMLLEPGFNNIVSLSQNRFEYRGVQRKCRNKTYKVELYDALLQSTSIFEGYYADCMKVESQKLCVSNCKCYNPFLPIYKNETGSPRICLNATFYSEEEILKNAKCMVNRLRKFKSFFLYRRFFNPKCQDYQLIKCNEVKYKIEKEKLLFAELSSGFTTQRRRKVIKG-FSKWFQRIDNRSDF-ERIRDNYIVITIKREFPKGDLYKEEYEYPFSQLLSDIGGLMGLWLGMSVVGLFEIFEIIYMYFTNL 498 The following BLAST results are available for this feature:
BLAST of asic vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of asic vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of asic vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of asic vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of asic vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of asic vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of asic vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of asic vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of asic vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of asic vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of asic vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of asic vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of asic vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of asic vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020592 ID=SMED30020592|Name=asic|organism=Schmidtea mediterranea sexual|type=transcript|length=1700bpback to top protein sequence of SMED30020592-orf-1 >SMED30020592-orf-1 ID=SMED30020592-orf-1|Name=SMED30020592-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=527bp MIDLIQSSTIHGIGHIFSATNKIFKVLWCILFLVGVIAIIVNIVFISMKFback to top Aliases
The feature 'asic' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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