Coiled-coil domain containing 124

Overview
NameCoiled-coil domain containing 124
Smed IDSMED30020553
Length (bp)847
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30020553

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
reproductive organSMED30020553SMESG000068745.1 SMESG000068744.1 Contig29504newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30020553SMESG000068745.1 SMESG000068744.1 Contig29504uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Human
Match: CCDC124 (coiled-coil domain containing 124 [Source:HGNC Symbol;Acc:HGNC:25171])

HSP 1 Score: 110.923 bits (276), Expect = 7.646e-29
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP----TEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDL-IP--ENLDRL----GSVDDETLK----ILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+AR+ E        KQK +ED YWKDDDKH  +K QRKE+KE +++  L++KKE Q L  +E S +   K P    + KVT  Q+E++ R+  +         +    L +P  EN++R     GSV+  T++    +L+  ++   RH E++++ AF AFE+ +LP LK+ENP +RLSQLKQ+L KE+ +SP+NP NQ  V +N
Sbjct:    1 MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKETQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLRRDHQLREAPDTAEKAKSHLEVPLEENVNRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRAVPFN 220
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Human
Match: CCDC124 (coiled-coil domain containing 124 [Source:HGNC Symbol;Acc:HGNC:25171])

HSP 1 Score: 110.923 bits (276), Expect = 7.646e-29
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP----TEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDL-IP--ENLDRL----GSVDDETLK----ILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+AR+ E        KQK +ED YWKDDDKH  +K QRKE+KE +++  L++KKE Q L  +E S +   K P    + KVT  Q+E++ R+  +         +    L +P  EN++R     GSV+  T++    +L+  ++   RH E++++ AF AFE+ +LP LK+ENP +RLSQLKQ+L KE+ +SP+NP NQ  V +N
Sbjct:    1 MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKETQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLRRDHQLREAPDTAEKAKSHLEVPLEENVNRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRAVPFN 220
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Human
Match: CCDC124 (coiled-coil domain containing 124 [Source:HGNC Symbol;Acc:HGNC:25171])

HSP 1 Score: 50.0618 bits (118), Expect = 3.652e-7
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP----TEKVTHYQLEESKR 359
            MPKK    NTK+  A+AR+ E        KQK +ED YWKDDDKH  +K QRKE+KE +++  L++KKE Q L  +E S +   K P    + KVT  Q+E++ R
Sbjct:    1 MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKETQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLR 105
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Celegans
Match: Y73E7A.1 (pep chromosome:WBcel235:I:1629003:1633498:1 gene:WBGene00022268.1 transcript:Y73E7A.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y73E7A.1)

HSP 1 Score: 107.071 bits (266), Expect = 8.525e-28
Identity = 94/223 (42.15%), Postives = 132/223 (59.19%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKK---EPTEKVT----HYQLEESKRXXXXXXXXXXXXXXXDE---DLIPENLDRL-------GSVDDETLKILNPKDKLV--RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK  + N K   A+ RK    K E + K KA ED  W D+DK  N+K+QRKED E K+ + L +K+E + L  +E+S + NKK     T+KVT    H + E+ +R  +E     K+  ++ E   DL+ ENL++L        +VDD  LK+L  +  L   +H EK+++ A+ AFE+ RLPELK  +P  RLSQLKQIL KE++KSPENP N   +  N
Sbjct:    1 MPKKFASENPKVTAARDRKATAKKDEADKKAKATEDAKWVDNDKLNNRKMQRKEDDEKKREEALRRKEENRKLAEEEMSSLGNKKPAGAATQKVTRAHIHIRKEDEERINRELEEKRKQEAQKIEVAGDLLVENLNKLEVEEGEARNVDD-ALKVLGEEKALDDDKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARLLALN 222
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Celegans
Match: Y73E7A.1 (pep chromosome:WBcel235:I:1629009:1633496:1 gene:WBGene00022268.1 transcript:Y73E7A.1b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y73E7A.1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.094e-15
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 3 
Query:  411 DLIPENLDRL-------GSVDDETLKILNPKDKLV--RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            DL+ ENL++L        +VDD  LK+L  +  L   +H EK+++ A+ AFE+ RLPELK  +P  RLSQLKQIL KE++KSPENP N   +  N
Sbjct:   52 DLLVENLNKLEVEEGEARNVDD-ALKVLGEEKALDDDKHPEKRMRAAYLAFEEARLPELKLNHPTFRLSQLKQILKKEWQKSPENPLNARLLALN 145
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Fly
Match: CG6013 (gene:FBgn0038675 transcript:FBtr0083714)

HSP 1 Score: 107.071 bits (266), Expect = 7.674e-28
Identity = 83/212 (39.15%), Postives = 123/212 (58.02%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINN-KKEPTEKVTHYQ-LEESKRXXX-----XXXXXXXXXXXXDEDLIPENLDR------LGSVDDETLKILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQC 653
            MPKK+  N+KAVEA+ RK+   K  +E K K  ED+ W+DDDK+  KK QRK+++E K+ +   +K E + L  +E+S IN  +K+P  K+     LEE ++K +       A          ++ I ENL+R      + S  DE + +L+  D    +H EK+++ A+  FE   LP +K ENP LR+SQ KQ+L KE+ KSP+NP NQ 
Sbjct:    1 MPKKMGINSKAVEARERKEATKKATQEKKSKEAEDRLWRDDDKNLAKKQQRKDEEERKRAEAAKRKAEAKALLDQEMSSINTQRKQPLAKINRQMILEEMEKKQRVIEAINEANKPMAARVVVQNHIEENLNRSMADTDVASNIDEAIVVLSVNDSEEDKHPEKRMRAAYKTFEANNLPRIKAENPSLRMSQWKQLLMKEWNKSPDNPFNQA 212
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Zebrafish
Match: ccdc124 (coiled-coil domain containing 124 [Source:NCBI gene;Acc:393537])

HSP 1 Score: 123.635 bits (309), Expect = 5.302e-34
Identity = 91/216 (42.13%), Postives = 131/216 (60.65%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK--KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDETLK----ILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK    N+K+  A+ARK E        KQK +ED  W+D+DK   KK QRK+DKE K+++ L++K+E Q L  +E S I  K  KE   KVT  Q+EE+ +  +    I +K     +  + EN++R+    G+V+  T++    +L+ K+ L RH E+++K A+ AFE+  +P +K ENP +RLSQLKQ L KE+ KSPENP NQ    YN K
Sbjct:    1 MPKKFQGENSKSATARARKAEAKAVADARKQKELEDALWEDNDKRVVKKEQRKDDKERKRLEALERKRENQRLLEEEDSKIKGKQTKEGPSKVTRAQIEETLQSKQNVKEIKEKEKSHLDVPLEENVNRIVPEEGTVEARTIEDAIAVLSTKEDLDRHPERRMKAAYTAFEEANMPRVKMENPNMRLSQLKQQLKKEWTKSPENPLNQRAASYNTK 216
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Zebrafish
Match: ccdc124 (coiled-coil domain containing 124 [Source:NCBI gene;Acc:393537])

HSP 1 Score: 123.635 bits (309), Expect = 5.302e-34
Identity = 91/216 (42.13%), Postives = 131/216 (60.65%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK--KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDETLK----ILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK    N+K+  A+ARK E        KQK +ED  W+D+DK   KK QRK+DKE K+++ L++K+E Q L  +E S I  K  KE   KVT  Q+EE+ +  +    I +K     +  + EN++R+    G+V+  T++    +L+ K+ L RH E+++K A+ AFE+  +P +K ENP +RLSQLKQ L KE+ KSPENP NQ    YN K
Sbjct:    1 MPKKFQGENSKSATARARKAEAKAVADARKQKELEDALWEDNDKRVVKKEQRKDDKERKRLEALERKRENQRLLEEEDSKIKGKQTKEGPSKVTRAQIEETLQSKQNVKEIKEKEKSHLDVPLEENVNRIVPEEGTVEARTIEDAIAVLSTKEDLDRHPERRMKAAYTAFEEANMPRVKMENPNMRLSQLKQQLKKEWTKSPENPLNQRAASYNTK 216
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Xenopus
Match: rab22a (RAB22A, member RAS oncogene family [Source:Xenbase;Acc:XB-GENE-489606])

HSP 1 Score: 129.413 bits (324), Expect = 5.151e-36
Identity = 97/216 (44.91%), Postives = 132/216 (61.11%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK----KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDET----LKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+ARK E        +QK IED YW+DDDKH  +K QRKEDKE K+++ L++KKE Q L  +E S +  K      P+ KVT  Q+EE+  + +E   I +K     E  + ENL+R     G V+  T    +  L+   +L RH E+++K AF AFE++ +P +K+ENP +RLSQLKQ+L KE+ KSPENP NQ H  YN
Sbjct:    1 MPKKFQGENTKSAVARARKAEAKAVADAKRQKEIEDAYWQDDDKHVMRKGQRKEDKEKKRLEQLERKKESQRLLEEEDSKMKGKPIKPAAPS-KVTRAQIEETLHREEEEKAISEKPKTHLEIPLEENLNRRILEEGEVEARTVEDAIAALSMSKELDRHPERRMKAAFTAFEEINMPRIKQENPNMRLSQLKQLLKKEWMKSPENPMNQQHATYN 215
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Mouse
Match: Ccdc124 (coiled-coil domain containing 124 [Source:MGI Symbol;Acc:MGI:1916403])

HSP 1 Score: 111.694 bits (278), Expect = 2.146e-29
Identity = 90/215 (41.86%), Postives = 134/215 (62.33%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP---TEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDET----LKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    N+K+  A+AR+ E        KQK +ED YWKD+DKH  +K QRKE+KE ++++ L++KKE Q L  +E S +   K P     KVT  Q+E+S R+ + A  + K     +  L  ENL+R     GSV+  T    + +L+  ++  RH E++++ AF AFE+++LP LK+ENP +RLSQLKQ+L KE+ +SP+NP NQ  + +N
Sbjct:    1 MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRRLEQLERKKETQRLLEEEDSRLKGGKAPRVAPAKVTRAQIEDSLRREQRAEPVEKAKSHLELPL-EENLNRRLQEEGSVEARTVEDAIAVLSVAEEADRHPERRMRAAFTAFEEVQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRALPFN 214
[Close]
BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Match: sp|Q28HN4|CC124_XENTR (Coiled-coil domain-containing protein 124 OS=Xenopus tropicalis OX=8364 GN=ccdc124 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.729e-35
Identity = 97/216 (44.91%), Postives = 132/216 (61.11%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK----KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDET----LKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+ARK E        +QK IED YW+DDDKH  +K QRKEDKE K+++ L++KKE Q L  +E S +  K      P+ KVT  Q+EE+  + +E   I +K     E  + ENL+R     G V+  T    +  L+   +L RH E+++K AF AFE++ +P +K+ENP +RLSQLKQ+L KE+ KSPENP NQ H  YN
Sbjct:    1 MPKKFQGENTKSAVARARKAEAKAVADAKRQKEIEDAYWQDDDKHVMRKGQRKEDKEKKRLEQLERKKESQRLLEEEDSKMKGKPIKPAAPS-KVTRAQIEETLHREEEEKAISEKPKTHLEIPLEENLNRRILEEGEVEARTVEDAIAALSMSKELDRHPERRMKAAFTAFEEINMPRIKQENPNMRLSQLKQLLKKEWMKSPENPMNQQHATYN 215
[Close]
BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Match: sp|Q68EY7|C124A_XENLA (Coiled-coil domain-containing protein 124-A OS=Xenopus laevis OX=8355 GN=ccdc124-a PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.711e-34
Identity = 96/217 (44.24%), Postives = 131/217 (60.37%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPT-----EKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDET----LKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+ARK E        +QK IED YW+DDDKH  +K QRKEDKE K+++ L++KKE Q L  +E S +  K +PT      KVT  ++EE+  K +E     +K     E  + EN++R     G V+  T    +  L+   +L RH E+++K AF AFE++ +P LK+ENP +RLSQLK +L KE+ KSPENP NQ H  YN
Sbjct:    1 MPKKFQGENTKSAVARARKAEAKAVSDGKRQKEIEDAYWQDDDKHVARKGQRKEDKEKKRLEQLERKKESQRLLDEEDSKM--KAKPTKPAAPSKVTRAEIEETLCKEEEHKATTEKPKTHLEMPLEENVNRRVLEEGEVEARTVEDAIAALSVGKELDRHPERRMKAAFAAFEEINMPLLKQENPNMRLSQLKHLLKKEWMKSPENPMNQQHAMYN 215
[Close]
BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Match: sp|Q6PHE8|CC124_DANRE (Coiled-coil domain-containing protein 124 OS=Danio rerio OX=7955 GN=ccdc124 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.002e-33
Identity = 91/216 (42.13%), Postives = 131/216 (60.65%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK--KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDETLK----ILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK    N+K+  A+ARK E        KQK +ED  W+D+DK   KK QRK+DKE K+++ L++K+E Q L  +E S I  K  KE   KVT  Q+EE+ +  +    I +K     +  + EN++R+    G+V+  T++    +L+ K+ L RH E+++K A+ AFE+  +P +K ENP +RLSQLKQ L KE+ KSPENP NQ    YN K
Sbjct:    1 MPKKFQGENSKSATARARKAEAKAVADARKQKELEDALWEDNDKRVVKKEQRKDDKERKRLEALERKRENQRLLEEEDSKIKGKQTKEGPSKVTRAQIEETLQSKQNVKEIKEKEKSHLDVPLEENVNRIVPEEGTVEARTIEDAIAVLSTKEDLDRHPERRMKAAYTAFEEANMPRVKMENPNMRLSQLKQQLKKEWTKSPENPLNQRAASYNTK 216
[Close]
BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Match: sp|Q9D8X2|CC124_MOUSE (Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.501e-28
Identity = 90/215 (41.86%), Postives = 134/215 (62.33%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP---TEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVDDET----LKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    N+K+  A+AR+ E        KQK +ED YWKD+DKH  +K QRKE+KE ++++ L++KKE Q L  +E S +   K P     KVT  Q+E+S R+ + A  + K     +  L  ENL+R     GSV+  T    + +L+  ++  RH E++++ AF AFE+++LP LK+ENP +RLSQLKQ+L KE+ +SP+NP NQ  + +N
Sbjct:    1 MPKKFQGENSKSAAARARRAEAKAAADAKKQKELEDAYWKDEDKHVMRKEQRKEEKEKRRLEQLERKKETQRLLEEEDSRLKGGKAPRVAPAKVTRAQIEDSLRREQRAEPVEKAKSHLELPL-EENLNRRLQEEGSVEARTVEDAIAVLSVAEEADRHPERRMRAAFTAFEEVQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRALPFN 214
[Close]
BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Match: sp|Q96CT7|CC124_HUMAN (Coiled-coil domain-containing protein 124 OS=Homo sapiens OX=9606 GN=CCDC124 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.672e-28
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEP----TEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDL-IP--ENLDRL----GSVDDETLK----ILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYN 668
            MPKK    NTK+  A+AR+ E        KQK +ED YWKDDDKH  +K QRKE+KE +++  L++KKE Q L  +E S +   K P    + KVT  Q+E++ R+  +         +    L +P  EN++R     GSV+  T++    +L+  ++   RH E++++ AF AFE+ +LP LK+ENP +RLSQLKQ+L KE+ +SP+NP NQ  V +N
Sbjct:    1 MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKETQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLRRDHQLREAPDTAEKAKSHLEVPLEENVNRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQENPNMRLSQLKQLLKKEWLRSPDNPMNQRAVPFN 220
[Close]
BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Match: A0A433TSH1 (Uncharacterized protein OS=Elysia chlorotica OX=188477 GN=EGW08_007654 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.187e-38
Identity = 95/219 (43.38%), Postives = 135/219 (61.64%), Query Frame = 3 
Query:   51 FSEMPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIP--ENLDRL---GSVD---DETLKILNPKDK--LVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
             S MPKK    N+KAVEAK RK  + K   +  +K   D+ WKDDDKH  +KLQRK+DKE K+++ L++KKE+Q LH +E+  I   K    K+T  Q+ E++ ++   A   K   +   D IP  EN++R+   G+     DE +  L+  D+  L +H EK+++ A+  FE  RLP LK+ENP +RLSQLKQ+L KE+ KSPENP N+  + YN K
Sbjct:    1 MSNMPKKFKGENSKAVEAKVRKNAQQKEAADKAEKERLDELWKDDDKHIARKLQRKDDKEKKRVEQLERKKELQQLHEQEMDSIKGAKSQAAKMTRAQIIETQERLAAEAEAAKIKSQLSHDEIPIEENVNRIEIEGTEARNVDEAISALSVSDEPHLDKHPEKRVRAAYTEFEATRLPVLKQENPNMRLSQLKQMLKKEWMKSPENPLNKRSLAYNEK 219
[Close]
BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Match: A0A224Y2X0 (Coiled-coil domain-containing protein OS=Rhipicephalus zambeziensis OX=60191 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.211e-37
Identity = 88/210 (41.90%), Postives = 130/210 (61.90%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL-----GSVDDETLKILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNF 671
            MPKK   NTK+ EA+A+K+     +KE K++A E+  W DDDKH  +K QRKE+++ KK + L+KK  ++ ++ +E+S I + K   EKVT   +  +  + ++ A    + V   E  + EN++R+         DE + +L+  D  V RH E++ K A+DAFEK +LPELK ENP LRLSQLKQ++ K++ KSPENP NQ H    F
Sbjct:    1 MPKKFGTNTKSAEARAKKEAVKIADKEKKERAAEEALWADDDKHIARKQQRKEERDKKKTEQLEKKAALKQMYDEEMSSIKSVKTRVEKVTRADI-AALAERQQKAQKDPQEVLLHEKPLEENVNRVFVENEARTVDEAIAVLSVSDAPVDRHPERRAKVAYDAFEKAKLPELKAENPNLRLSQLKQMIRKDWMKSPENPLNQIHTACKF 209
[Close]
BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Match: A0A131YKA0 (Coiled-coil domain-containing protein OS=Rhipicephalus appendiculatus OX=34631 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.049e-37
Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL-----GSVDDETLKILNPKDKLV-RHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNF 671
            MPKK   NTK+ EA+A+K+     +KE K++A E+  W DDDKH  +K QRKE+++ KK + L+KK  ++ ++ +E+S I   K   EKVT   +  +  + ++ A    + V   E  + EN++R+         DE + +L+  D  V RH E++ K A+DAFEK +LPELK ENP LRLSQLKQ++ K++ KSPENP NQ H    F
Sbjct:    1 MPKKFGTNTKSAEARAKKEAVKIADKEKKERAAEEALWADDDKHIARKQQRKEERDKKKTEQLEKKAALKQMYDEEMSSIKAVKTRVEKVTRADI-AALAERQQKAQKDPQEVLLHEKPLEENVNRVFVENEARTVDEAIAVLSVSDAPVDRHPERRAKVAYDAFEKAKLPELKAENPNLRLSQLKQMIRKDWMKSPENPLNQIHTACKF 209
[Close]
BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Match: G4LXI6 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 GN=Smp_004360.1 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.024e-36
Identity = 88/220 (40.00%), Postives = 140/220 (63.64%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK-----KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDE--DLIPENLDRL------GSVDDETLKIL--NPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK+    K++EA+ R+ EK + E+E+  K  ED+YW+DDDKH N+K QRKE+K++K+++ L++KKE + L+  EI+G  +      KE   K+T  Q+ E+++K++     + +  ++ E  +L P N +R+          +E + IL  N +    RH EK++K A+ AFE+  +P+LK ENP +R SQLKQ++FK F+ SPENP+NQ +  YN K
Sbjct:    1 MPKKLGTCPKSLEARERRAEKKREEREITLKKAEDEYWRDDDKHLNRKQQRKEEKDSKRLEQLERKKEKERLYNDEIAGFKSSKSTVTKEQPSKLTQAQIAEAQKKLEAQLLALNQTTQKSEPAELAP-NPNRIEKDGLEARTVEEAITILSVNGEGDGDRHPEKRLKAAYQAFEERMMPQLKAENPNMRHSQLKQLVFKMFQTSPENPKNQHNSCYNSK 219
[Close]
BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Match: A0A094ZWK6 (Coiled-coil domain-containing protein 124-A OS=Schistosoma haematobium OX=6185 GN=MS3_05904 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.380e-36
Identity = 87/218 (39.91%), Postives = 138/218 (63.30%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK-----KEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDE--DLIPENLDRL------GSVDDETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK+    K++EA+ R+ EK + E+E+  K  ED+YW+DDDKH NKK QRKE+K++K+++ +++KKE + L+  EI+G  +      KE   K+T  Q+ E+++K++     + +  ++ E  +L P N +R           +E + IL+      RH EK++K A+ AFE+  +P+LK ENP +R SQLKQ++FK F+ SPENP+NQ +  YN K
Sbjct:    1 MPKKLGTCPKSLEARERRAEKKREEREITLKKAEDEYWRDDDKHLNKKQQRKEEKDSKRLELIERKKEKERLYNDEIAGFKSSKSTVTKEQPSKLTQAQIAEAQKKLEAQLSALNQTTQKSEPAELTP-NPNRTEKDGLEARTVEEAITILSFNGDGDRHPEKRLKAAYQAFEERLMPQLKAENPNMRHSQLKQLIFKMFQTSPENPKNQHNSCYNSK 217
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Cavefish
Match: ccdc124 (coiled-coil domain containing 124 [Source:NCBI gene;Acc:103026476])

HSP 1 Score: 125.176 bits (313), Expect = 1.134e-34
Identity = 92/215 (42.79%), Postives = 132/215 (61.40%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNK--KEPTEKVTHYQLEESK-RXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVD--DETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK    N+K+  A+ARK E        KQK +ED  W++ DKH  KK QRK+DKE K+++ L++K+E Q L  +E S I  K  KEP  KVT  Q+EE+  ++ +      +K     E+ + EN++R+    GS    ++ + +L+ K+   RH E+++K A+ AFE++ +P LK ENP +RLSQLKQ L KE+ KSPENP NQ  V YN K
Sbjct:    1 MPKKFQGENSKSSTARARKAEAKAVADARKQKELEDALWQESDKHVLKKEQRKDDKEKKRLEALERKRENQRLLDEEDSKIKGKQSKEPLGKVTRAQIEETLLKEQELQQETKEKEKTHLEEPLEENINRIIPEEGSARTIEDAIAVLSTKEDTDRHPERRMKAAYAAFEEVNMPRLKMENPNMRLSQLKQQLKKEWTKSPENPLNQRFVSYNTK 215
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002513.1 (pep scaffold:Pmarinus_7.0:GL484004:4049:8990:-1 gene:ENSPMAG00000002291.1 transcript:ENSPMAT00000002513.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 56.225 bits (134), Expect = 4.311e-10
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 3 
Query:   60 MPKKINA-NTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNL 275
            MPKK +  NTKA  A+ RK+E        KQK +ED  W +DDK+  KK QRK ++E K+++ L++KKE Q L
Sbjct:    1 MPKKFSTENTKAAAARVRKEEAKAVATAKKQKEVEDALWVEDDKNVLKKEQRKVEREKKRLEQLERKKEAQRL 73
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Nematostella
Match: EDO45700 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RS85])

HSP 1 Score: 79.7221 bits (195), Expect = 4.961e-18
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 3 
Query:  417 IPENLDRLGSVD----DETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            + E L+  G+V+    +E +  L+ + K+ +H EK++K A+  FE+  LP LK+ENP LRLSQLKQ+L K++ KSPENP N  H+ YN K
Sbjct:  120 MAELLEAEGAVEARSVEEAIATLSVEQKIEKHPEKRLKAAYAEFEERELPRLKQENPNLRLSQLKQMLRKDWMKSPENPLNAAHLAYNAK 209
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Medaka
Match: ccdc124 (coiled-coil domain containing 124 [Source:NCBI gene;Acc:105353907])

HSP 1 Score: 109.768 bits (273), Expect = 1.069e-28
Identity = 90/221 (40.72%), Postives = 133/221 (60.18%), Query Frame = 3 
Query:   60 MPKK-INANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKE----PTEKVTHYQLEESKRXXXXXXXXXXXXXXXD-EDLIPENLDRL----GSVD----DETLKILN--PKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            MPKK +  N+KAV A+ARK E        K++  +D  W++ DKH  KK QRK+DKE ++++ L++KKE Q L  +E S I  K +       KVT  Q+EE+ +  +     IK   +   E  + EN++R+    G+V+    ++ + +L+  P+D L RH E+++K AF A+E+  +P LK+ENP +RLSQLKQ L KE+ KSPENP NQ    YN K
Sbjct:    1 MPKKFLGENSKAVTARARKAEAKAVADARKKQEEDDARWQETDKHVLKKEQRKDDKEKRRLELLERKKENQRLLEEESSKIRGKSQKENGSGGKVTRAQIEETLQNERGVEEPIKSREKSHLETPLEENINRIVPEEGTVEARSIEDAIAVLSTGPED-LDRHPERRMKSAFAAYEEENMPRLKQENPNMRLSQLKQQLKKEWAKSPENPLNQRFTSYNSK 220
[Close]
BLAST of Coiled-coil domain containing 124 vs. Ensembl Medaka
Match: ENSORLT00000019696.2 (pep primary_assembly:ASM223467v1:13:32674078:32675635:-1 gene:ENSORLG00000015728.2 transcript:ENSORLT00000019696.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 87.8113 bits (216), Expect = 1.553e-20
Identity = 70/186 (37.63%), Postives = 105/186 (56.45%), Query Frame = 3 
Query:  159 EDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKE----PTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRL----GSVD----DETLKILN--PKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFK 674
            +D  W++ DK      QRK+DKE ++ + L +KKE Q L  +E S I  K +       KVT  Q+EE+ +                E  + EN++R+    G+V+    ++ + +L+  P+D L RH E+++K AF A+++  +P LK+ENP +RLSQLKQ L KE+ KSPENP NQ    YN K
Sbjct:   39 DDACWQETDK------QRKDDKEKRRQELLKRKKENQRLLEEESSKIRGKSQKENGSGGKVTLAQIEETLQNDHL------------ETPLEENINRIVPEEGTVEVRSIEDAIAVLSTGPED-LDRHPERRMKSAFAAYDEENMPRLKQENPNMRLSQLKQQLKKEWAKSPENPLNQRFTSYNSK 205
[Close]
BLAST of Coiled-coil domain containing 124 vs. Planmine SMEST
Match: SMESG000068745.1 (SMESG000068745.1)

HSP 1 Score: 366.696 bits (940), Expect = 2.633e-128
Identity = 201/215 (93.49%), Postives = 210/215 (97.67%), Query Frame = 3 
Query:   57 EMPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRLGSVDDETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFKIEKNDPILD 701
            +MPKKINANTKAVEAKARKQEKIKCE ELKQKAIEDKYWKDDDKH N+KLQRKEDKEAKKIQHL+KKK+IQNLHYKEISG+NNKKEP EKVT YQLEESKRKIKEAAGIIKKIVEEDEDLIPENLDRLGSVDDETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHV+YN+KIEKND ++D
Sbjct:   75 QMPKKINANTKAVEAKARKQEKIKCENELKQKAIEDKYWKDDDKHVNRKLQRKEDKEAKKIQHLEKKKDIQNLHYKEISGVNNKKEPKEKVTRYQLEESKRKIKEAAGIIKKIVEEDEDLIPENLDRLGSVDDETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVNYNYKIEKNDSVID 289
[Close]
BLAST of Coiled-coil domain containing 124 vs. Planmine SMEST
Match: SMESG000022022.1 (SMESG000022022.1)

HSP 1 Score: 210.305 bits (534), Expect = 9.196e-68
Identity = 138/220 (62.73%), Postives = 170/220 (77.27%), Query Frame = 3 
Query:   60 MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQRKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKRXXXXXXXXXXXXXXXDEDLIPENLDRLGSVD-------DETLKILNPKDKLVRHVEKKIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHVDYNFKIEKNDPIL 698
            MPKK+N NTK+VEAKARK+EK K E++  QK I+D+YWKDDDKH NKK QRKE+KEAKKIQHL+KKKE+Q LH KE+  I  KKEP +KVTHYQLEE KRK+ +AAGI KK V   E+ I EN++RL  +D       DE LK+L  +DK  RH+EK++K A+ A+E  R+P++K E PGLR  QLKQ+L KEFEKSPENP+NQ HVDYNFK +KN P+L
Sbjct:    1 MPKKLNTNTKSVEAKARKEEKKKSERDAMQKQIDDEYWKDDDKHVNKKNQRKEEKEAKKIQHLEKKKELQELHDKEMDEIKPKKEPVQKVTHYQLEEVKRKVNDAAGIKKKEV---EEPISENVNRL-VIDGDEARNVDEALKLLTVEDKPDRHMEKRVKAAYLAYEDKRMPDMKLEYPGLRFGQLKQMLSKEFEKSPENPKNQGHVDYNFKPQKNVPVL 216
The following BLAST results are available for this feature:
BLAST of Coiled-coil domain containing 124 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 3
Match NameE-valueIdentityDescription
CCDC1247.646e-2940.91coiled-coil domain containing 124 [Source:HGNC Sym... [more]
CCDC1247.646e-2940.91coiled-coil domain containing 124 [Source:HGNC Sym... [more]
CCDC1243.652e-744.76coiled-coil domain containing 124 [Source:HGNC Sym... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Y73E7A.18.525e-2842.15pep chromosome:WBcel235:I:1629003:1633498:1 gene:W... [more]
Y73E7A.12.094e-1548.42pep chromosome:WBcel235:I:1629009:1633496:1 gene:W... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
CG60137.674e-2839.15gene:FBgn0038675 transcript:FBtr0083714[more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ccdc1245.302e-3442.13coiled-coil domain containing 124 [Source:NCBI gen... [more]
ccdc1245.302e-3442.13coiled-coil domain containing 124 [Source:NCBI gen... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rab22a5.151e-3644.91RAB22A, member RAS oncogene family [Source:Xenbase... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Ccdc1242.146e-2941.86coiled-coil domain containing 124 [Source:MGI Symb... [more]
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BLAST of Coiled-coil domain containing 124 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q28HN4|CC124_XENTR2.729e-3544.91Coiled-coil domain-containing protein 124 OS=Xenop... [more]
sp|Q68EY7|C124A_XENLA3.711e-3444.24Coiled-coil domain-containing protein 124-A OS=Xen... [more]
sp|Q6PHE8|CC124_DANRE4.002e-3342.13Coiled-coil domain-containing protein 124 OS=Danio... [more]
sp|Q9D8X2|CC124_MOUSE1.501e-2841.86Coiled-coil domain-containing protein 124 OS=Mus m... [more]
sp|Q96CT7|CC124_HUMAN3.672e-2840.91Coiled-coil domain-containing protein 124 OS=Homo ... [more]
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BLAST of Coiled-coil domain containing 124 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A433TSH14.187e-3843.38Uncharacterized protein OS=Elysia chlorotica OX=18... [more]
A0A224Y2X02.211e-3741.90Coiled-coil domain-containing protein OS=Rhipiceph... [more]
A0A131YKA05.049e-3741.90Coiled-coil domain-containing protein OS=Rhipiceph... [more]
G4LXI61.024e-3640.00Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
A0A094ZWK61.380e-3639.91Coiled-coil domain-containing protein 124-A OS=Sch... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ccdc1241.134e-3442.79coiled-coil domain containing 124 [Source:NCBI gen... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000002513.14.311e-1046.58pep scaffold:Pmarinus_7.0:GL484004:4049:8990:-1 ge... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO457004.961e-1846.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Coiled-coil domain containing 124 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ccdc1241.069e-2840.72coiled-coil domain containing 124 [Source:NCBI gen... [more]
ENSORLT00000019696.21.553e-2037.63pep primary_assembly:ASM223467v1:13:32674078:32675... [more]
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BLAST of Coiled-coil domain containing 124 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000068745.12.633e-12893.49SMESG000068745.1[more]
SMESG000022022.19.196e-6862.73SMESG000022022.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30020553 ID=SMED30020553|Name=Coiled-coil domain containing 124|organism=Schmidtea mediterranea sexual|type=transcript|length=847bp
CTCAGAAATCGTAAGAACCTTTGTTATTTTGTTATATTTTAGTCATAATA
TTTTCAGAAATGCCTAAAAAAATAAATGCAAATACTAAAGCTGTAGAAGC
AAAAGCCAGAAAGCAGGAAAAGATAAAGTGTGAAAAAGAATTAAAACAAA
AAGCTATTGAGGATAAATATTGGAAAGATGATGATAAACATGCAAATAAA
AAACTTCAACGAAAAGAAGATAAAGAAGCAAAAAAGATACAACATTTAGA
TAAAAAGAAAGAAATTCAAAATTTGCATTATAAAGAAATAAGCGGAATTA
ATAACAAAAAAGAACCTACAGAAAAGGTTACACACTATCAATTAGAAGAA
TCGAAAAGGAAAATAAAGGAAGCCGCAGGAATTATAAAGAAGATAGTTGA
GGAAGATGAAGATCTGATTCCAGAAAATCTCGATAGATTAGGCTCTGTTG
ATGACGAAACACTTAAAATTTTAAATCCTAAAGACAAACTTGTCAGACAT
GTGGAAAAGAAAATTAAGGGAGCTTTTGACGCATTTGAAAAACTTCGTCT
ACCAGAATTAAAGAAAGAAAATCCTGGACTTCGATTGAGTCAATTGAAAC
AAATTTTATTTAAAGAGTTTGAGAAGTCACCTGAAAATCCAAGGAATCAA
TGTCATGTAGACTATAATTTTAAGATAGAGAAAAATGATCCGATTTTAGA
CTAAGAATTATTTATGTTGTGAATATAATATTATGTATATATTAATGTTA
AGAATGCAAAAGTGTACGATGCTTCTCACAACATCAACTTCAACGTAAAG
GTCCATCAATATCTAGATATGGCCATTGAAAGTAGACTGCCACTTGT
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protein sequence of SMED30020553-orf-1

>SMED30020553-orf-1 ID=SMED30020553-orf-1|Name=SMED30020553-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=215bp
MPKKINANTKAVEAKARKQEKIKCEKELKQKAIEDKYWKDDDKHANKKLQ
RKEDKEAKKIQHLDKKKEIQNLHYKEISGINNKKEPTEKVTHYQLEESKR
KIKEAAGIIKKIVEEDEDLIPENLDRLGSVDDETLKILNPKDKLVRHVEK
KIKGAFDAFEKLRLPELKKENPGLRLSQLKQILFKEFEKSPENPRNQCHV
DYNFKIEKNDPILD*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003677DNA binding
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005815microtubule organizing center
GO:0005856cytoskeleton
GO:0030496midbody
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR010422Ccdc124/Oxs1
Vocabulary: biological process
TermDefinition
GO:0007049cell cycle
GO:0051301cell division
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 7..29