Tigger transposable element-derived protein 2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020511 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 64.6994 bits (156), Expect = 3.054e-10 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGE 780 F S GW+ +FK+RHSIR + I E+L+ + + + F F+ E + PEQIYNADETGL +K S+ V G+ Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRISVIKGK 196
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Match: JRK (Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]) HSP 1 Score: 60.8474 bits (146), Expect = 6.491e-9 Identity = 58/206 (28.16%), Postives = 82/206 (39.81%), Query Frame = 1 Query: 229 LSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTNRKT-----------KEITQRR*YSLQKNQENFRR*SS*S*KGYLSVVFE*--AT*S*DCHRLNPAV--KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK---NPNSKTLVSNGEKNAK 792 L+L EK I LE K L + Y V ST+ IR ++ K + QRR K + R V++E S P + KA + + + + S GW+ +FK RH I+ L EK S +H F F+ E + EQ+YNADETGL ++ NP + G K K Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALEQRRTLHTPKLEHLDR------------VLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPKQGK 213
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Match: JRK (Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]) HSP 1 Score: 60.8474 bits (146), Expect = 6.491e-9 Identity = 58/206 (28.16%), Postives = 82/206 (39.81%), Query Frame = 1 Query: 229 LSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTNRKT-----------KEITQRR*YSLQKNQENFRR*SS*S*KGYLSVVFE*--AT*S*DCHRLNPAV--KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK---NPNSKTLVSNGEKNAK 792 L+L EK I LE K L + Y V ST+ IR ++ K + QRR K + R V++E S P + KA + + + + S GW+ +FK RH I+ L EK S +H F F+ E + EQ+YNADETGL ++ NP + G K K Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALEQRRTLHTPKLEHLDR------------VLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPKQGK 213
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Match: JRK (Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]) HSP 1 Score: 60.077 bits (144), Expect = 9.934e-9 Identity = 58/206 (28.16%), Postives = 82/206 (39.81%), Query Frame = 1 Query: 229 LSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTNRKT-----------KEITQRR*YSLQKNQENFRR*SS*S*KGYLSVVFE*--AT*S*DCHRLNPAV--KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK---NPNSKTLVSNGEKNAK 792 L+L EK I LE K L + Y V ST+ IR ++ K + QRR K + R V++E S P + KA + + + + S GW+ +FK RH I+ L EK S +H F F+ E + EQ+YNADETGL ++ NP + G K K Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALEQRRTLHTPKLEHLDR------------VLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPKQGK 213
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Match: JRK (Jrk helix-turn-helix protein [Source:HGNC Symbol;Acc:HGNC:6199]) HSP 1 Score: 60.077 bits (144), Expect = 9.934e-9 Identity = 58/206 (28.16%), Postives = 82/206 (39.81%), Query Frame = 1 Query: 229 LSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTNRKT-----------KEITQRR*YSLQKNQENFRR*SS*S*KGYLSVVFE*--AT*S*DCHRLNPAV--KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK---NPNSKTLVSNGEKNAK 792 L+L EK I LE K L + Y V ST+ IR ++ K + QRR K + R V++E S P + KA + + + + S GW+ +FK RH I+ L EK S +H F F+ E + EQ+YNADETGL ++ NP + G K K Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALEQRRTLHTPKLEHLDR------------VLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPKQGK 213
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Xenopus
Match: kif6 (kinesin family member 6 [Source:Xenbase;Acc:XB-GENE-1014042]) HSP 1 Score: 50.8322 bits (120), Expect = 7.104e-6 Identity = 53/224 (23.66%), Postives = 93/224 (41.52%), Query Frame = 1 Query: 196 ISVTISKRKPKLSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIR-------------------TNRKTKEITQRR*YSL---------QKNQENFRR*SS*S*KGYLSVVFE*AT*S*DCHRLNPAVKALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEK 783 I +++ LS+ +K +L LE+ K LC +Y + STI ++ +RKT + Q + S+ Q+ +ENF S++ +A + H LN + S GW KFK+R+ + +L I GEK S ++ F++K + + + EQ+YNA + L +++ K LV+ +K Sbjct: 176 IPPDTKRKRVSLSIKDKVTLLQDLENGASVKSLCDKYGIGTSTIYDLKKQKDKLLTFYSNSDAPDLMADRKT--LHQAKNVSVDKVLMEWIRQRRRENFPL--------SRSLIM---------------AQAKKFHVLLNISTPCEYSSGWYGKFKKRNGLSILSINGEKASEEYNVADNFVKKLNKLVSDEHLSAEQVYNAAKASLFWRHLPQK-LVATAQK 373
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Mouse
Match: Jrkl (Jrk-like [Source:MGI Symbol;Acc:MGI:1924782]) HSP 1 Score: 69.3218 bits (168), Expect = 7.606e-12 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNAKFKAKQHNVSE 822 F S GW+ +FK+RHSIR + I E+L+ + + + F F+ E+ + PEQIYNADETGL +K S+T V G K HN+ E Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLFWKCLPSRTTVIKG----KCTVPGHNLGE 206
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Mouse
Match: Jrk (jerky [Source:MGI Symbol;Acc:MGI:106214]) HSP 1 Score: 60.8474 bits (146), Expect = 4.171e-9 Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 505 KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKN-PNS 756 KA + ++ + + S GW+ +FK RH I+ L EK + +H F F+ E + PEQ+Y+ADETGLV++ PNS Sbjct: 115 KAKDFYKQMRLTEPCVFSGGWLWRFKARHGIKKLDASSEKQAADHQAAEQFCGFFRSLAAEHGLSPEQVYSADETGLVWRCLPNS 199
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Mouse
Match: Tigd2 (tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390]) HSP 1 Score: 58.5362 bits (140), Expect = 1.978e-8 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKN 786 F S GW+ +FK+RH I G KL + + S F F+ E +LPEQIY AD+TGL +K ++TL + +++ Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQS 198
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Match: sp|B2RRL2|JERKL_MOUSE (Jerky protein homolog-like OS=Mus musculus OX=10090 GN=Jrkl PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.320e-11 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNAKFKAKQHNVSE 822 F S GW+ +FK+RHSIR + I E+L+ + + + F F+ E+ + PEQIYNADETGL +K S+T V G K HN+ E Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIEQENLQPEQIYNADETGLFWKCLPSRTTVIKG----KCTVPGHNLGE 206
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Match: sp|Q9Y4A0|JERKL_HUMAN (Jerky protein homolog-like OS=Homo sapiens OX=9606 GN=JRKL PE=2 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 1.467e-9 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGE 780 F S GW+ +FK+RHSIR + I E+L+ + + + F F+ E + PEQIYNADETGL +K S+ V G+ Sbjct: 119 FNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADETGLFWKCLPSRISVIKGK 196
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Match: sp|Q60976|JERKY_MOUSE (Jerky protein OS=Mus musculus OX=10090 GN=Jrk PE=2 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 2.918e-8 Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 505 KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKN-PNS 756 KA + ++ + + S GW+ +FK RH I+ L EK + +H F F+ E + PEQ+Y+ADETGLV++ PNS Sbjct: 115 KAKDFYKQMRLTEPCVFSGGWLWRFKARHGIKKLDASSEKQAADHQAAEQFCGFFRSLAAEHGLSPEQVYSADETGLVWRCLPNS 199
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Match: sp|O75564|JERKY_HUMAN (Jerky protein homolog OS=Homo sapiens OX=9606 GN=JRK PE=1 SV=3) HSP 1 Score: 60.077 bits (144), Expect = 4.771e-8 Identity = 58/206 (28.16%), Postives = 82/206 (39.81%), Query Frame = 1 Query: 229 LSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTNRKT-----------KEITQRR*YSLQKNQENFRR*SS*S*KGYLSVVFE*--AT*S*DCHRLNPAV--KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK---NPNSKTLVSNGEKNAK 792 L+L EK I LE K L + Y V ST+ IR ++ K + QRR K + R V++E S P + KA + + + + S GW+ +FK RH I+ L EK S +H F F+ E + EQ+YNADETGL ++ NP + G K K Sbjct: 20 LTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKALEQRRTLHTPKLEHLDR------------VLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPKQGK 213
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Match: sp|Q0VBL1|TIGD2_MOUSE (Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.384e-7 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKN 786 F S GW+ +FK+RH I G KL + + S F F+ E +LPEQIY AD+TGL +K ++TL + +++ Sbjct: 119 FNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAASEFCGNFQEFVERENLLPEQIYGADQTGLFWKCLPTRTLAFDTDQS 198
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Match: A0A4C1SSZ4 (Jerky protein homolog-like OS=Eumeta variegata OX=151549 GN=Jrkl PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.246e-20 Identity = 51/96 (53.12%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 505 KALELHRNL-NCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNA 789 KA+ELH + N F S GW+QKFK+R+ IRLLKICGEKLS H + + +K KR+ EEL + +Q+YNADE+GL +KN +KT VS+ EK A Sbjct: 5 KAIELHNQMKENNHAFNASDGWLQKFKKRYGIRLLKICGEKLSARHHLVEPYKQKLKRRIEELGLNNDQLYNADESGLCWKNVPNKTYVSSLEKTA 100
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Match: H3AB53 (Uncharacterized protein OS=Latimeria chalumnae OX=7897 GN=LOC102353587 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.044e-17 Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 1 Query: 505 KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNA 789 KAL+ H+ + C F SHGW++ FK+RH IR L I GEKLS N +FIEKFK + P+ IYN ET L +K SKT S EK+A Sbjct: 103 KALQFHQAMGCRSEFKASHGWLESFKKRHGIRQLSIEGEKLSPNKGAADSFIEKFKNIIQNEGYTPDLIYNCSETSLYWKVLPSKTFASQSEKSA 197 HSP 2 Score: 26.9498 bits (58), Expect = 1.044e-17 Identity = 13/44 (29.55%), Postives = 26/44 (59.09%), Query Frame = 1 Query: 214 KRKPKLSLDEKCKILDALEDNMKSKDLCKRYRVNKSTISKIRTN 345 +++ L L++K I++ LE+ L K Y + +ST+S ++ N Sbjct: 3 RKRTVLPLEKKVVIVNRLENGESVTKLAKEYGLGQSTVSDLKRN 46 HSP 3 Score: 25.409 bits (54), Expect = 1.044e-17 Identity = 17/50 (34.00%), Postives = 29/50 (58.00%), Query Frame = 2 Query: 359 KLHKGDDTVCKKIKRISAVKVPEVEKAIYLWFLNERLNHKIVTD*ILQLK 508 K+ G + +KI R V+V ++++A+Y WFL +R + V+ IL K Sbjct: 56 KMETGAGLLARKIMR-QPVEV-KLDEALYNWFLQKRAKGEPVSGPILSEK 103
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Match: A0A1B6FF49 (Uncharacterized protein OS=Cuerna arida OX=1464854 GN=g.11907 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.553e-16 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 502 VKALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNAK-FKAKQHNVSEFI 828 KA+E+++ L+ ++ F S GW+ KFK RH IR L I GEKLS N S ++ F KF+ K EL ++ EQ+YN DETGL +K KTL S EK A FK ++ ++ + Sbjct: 105 AKAVEMNKKLDGDLSFKASIGWLDKFKFRHGIRQLDISGEKLSANSSVIAEFKVKFEEKIAELDLVREQVYNCDETGLNWKALPQKTLASLSEKAAPGFKVQKDRITAMV 214 HSP 2 Score: 25.7942 bits (55), Expect = 2.553e-16 Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 2 Query: 350 KLKKLHKGDDTVCKKIKRISAVKVPEVEKAIYLWFLNER 466 ++ K+H D V + K + K E++ A+Y WF+ R Sbjct: 55 RVSKMHSTDGDVQTR-KTMKPAKYDELDTAMYRWFIQAR 92
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Match: A0A2A4K1H2 (Uncharacterized protein OS=Heliothis virescens OX=7102 GN=B5V51_5256 PE=4 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.885e-16 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 1 Query: 502 VKALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK 744 KA+E ++ + F S GW+ KFK+R IRLL I GEK+S++ S + FI+ FK K EEL +LP+QIYNADE+GL ++ Sbjct: 102 AKAIEFYQKITHKDDFRASDGWLDKFKKRFGIRLLTISGEKVSSDESAVQPFIQHFKNKVEELGLLPDQIYNADESGLFWR 182 HSP 2 Score: 28.8758 bits (63), Expect = 2.885e-16 Identity = 13/39 (33.33%), Postives = 21/39 (53.85%), Query Frame = 2 Query: 392 KIKRISAVKVPEVEKAIYLWFLNERLNHKIVTD*ILQLK 508 K K + P++E A+Y+WF R N ++ IL+ K Sbjct: 65 KRKTLKVGNCPKMENALYMWFTQRRYNCTPISGEILKAK 103
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Match: W8CBP7 (Jerky protein (Fragment) OS=Ceratitis capitata OX=7213 GN=JERKL PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.978e-16 Identity = 39/97 (40.21%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 499 AVKALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNA 789 A+KA ++ + F+ S GW+++FK RH IRL+ I GEKLS + + + F +F +K +L + P Q+YNADE+GL ++ +KT VS EK+ Sbjct: 28 AMKAKFFYKEITKKDDFVASKGWLERFKSRHGIRLMTITGEKLSNDATCIEPFKLRFLQKVNDLNLDPSQVYNADESGLFWRVMPNKTFVSCNEKDV 124 HSP 2 Score: 36.5798 bits (83), Expect = 4.978e-16 Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 422 PEVEKAIYLWFLNERLNHKIVTD*ILQLK 508 PEVE+A+Y+WFL ER H ++ +L +K Sbjct: 2 PEVEEALYMWFLQERNRHAPISGPMLAMK 30
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004617.1 (pep scaffold:Pmarinus_7.0:GL477874:26927:28564:-1 gene:ENSPMAG00000004208.1 transcript:ENSPMAT00000004617.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 76.6406 bits (187), Expect = 7.018e-15 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNA 789 FM S GW++ FK RH IR L + GE+ ++ + +I +F+ ++ + QIYNADETGL +K+ SKTL S+ E NA Sbjct: 127 FMASQGWLRSFKERHGIRRLSVVGERHGSDVDAVREYIARFQAMVDDKGLCASQIYNADETGLFWKSLPSKTLASSSEVNA 207
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 53.5286 bits (127), Expect = 1.170e-9 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 505 KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSN 774 +A H +L F S GW++ FKRR+ I ++ EK+S + + E F + EE + P+Q+Y A ETGL +K+ ++T N Sbjct: 103 QARHFHEHLGLTEPFAASAGWLRNFKRRYCIG--EVVVEKVSDDAAEALAARESFMKFLEEQGLSPQQVYAATETGLYWKSLPARTAAGN 190 HSP 2 Score: 26.9498 bits (58), Expect = 1.170e-9 Identity = 13/41 (31.71%), Postives = 21/41 (51.22%), Query Frame = 2 Query: 377 DTVCKKIKRISAVKVPEVEKAIYLWFLNERLNHKIVTD*IL 499 DT +K I + P++E+A+Y WF R +T +L Sbjct: 60 DTGLSYMKVIRESRFPQLEEAVYKWFRQHRAMGLPITSSML 100
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005656.1 (pep scaffold:Pmarinus_7.0:GL476578:539135:542172:1 gene:ENSPMAG00000005132.1 transcript:ENSPMAT00000005656.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 56.9954 bits (136), Expect = 8.345e-9 Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 1 Query: 535 CNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNAK-FKAKQHNVSEFI 828 N F S GW KFK R+++R LK+ GE + F K E PEQ++N +ETGL +K + T +S EK A FKA + ++ + Sbjct: 126 ANETFGASTGWYAKFKGRYNLRHLKMTGETAGADVEAAEAFKSTLKEIIEGGGYSPEQVFNVNETGLFWKRMPASTFLSREEKTAPGFKASKDRLALLV 224
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Match: JRKL (JRK like [Source:HGNC Symbol;Acc:HGNC:6200]) HSP 1 Score: 51.9878 bits (123), Expect = 3.309e-7 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 1 Query: 505 KALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK 744 KA +LHR+L + GW+ +F RH I L E+ ST S F +F R + ++P+Q+Y A E L +K Sbjct: 105 KAQQLHRDLGISEPLNVGCGWLHRFMHRHGIHGLNPQPERFSTEDCATSAFCRRFLRLVDAHALVPDQLYGATELELHWK 184
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001313.1 (pep scaffold:Pmarinus_7.0:GL487606:277:3092:-1 gene:ENSPMAG00000001181.1 transcript:ENSPMAT00000001313.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 1.104e-6 Identity = 34/110 (30.91%), Postives = 51/110 (46.36%), Query Frame = 1 Query: 502 VKALELHRNLNCNVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSNGEKNAK-FKAKQHNVSEFI 828 KAL L + F S GW KFK R+++ LK+ GE + F K E PEQ++N +ET L +K + T +S +K A FKA + ++ + Sbjct: 114 AKALRLEESRQAET-FGASTGWYAKFKGRYNLHHLKMTGETAGADVEAAEAFKSTLKEIIEGGGYSPEQVFNVNETRLFWKRMPASTFLSREKKTAPGFKASKDRLALLV 222
BLAST of Tigger transposable element-derived protein 2 vs. Planmine SMEST
Match: SMESG000032276.1 (SMESG000032276.1) HSP 1 Score: 58.9214 bits (141), Expect = 8.110e-10 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLVSN---GEKNAK 792 F +GW+QKFK+RHS +L+K+ GE T S F+ F+ K + E +YN DETG+ +K SKT+ N G KN K Sbjct: 4 FKCLYGWLQKFKKRHSFQLIKLHGETFMTEPFDTSDFLTDFQSKLKGYD--KECVYNMDETGIFYKLIPSKTVCQNARSGFKNLK 86
BLAST of Tigger transposable element-derived protein 2 vs. Planmine SMEST
Match: SMESG000027161.1 (SMESG000027161.1) HSP 1 Score: 50.447 bits (119), Expect = 2.367e-6 Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 1 Query: 547 FMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFK 744 F S+GW+ +FK+RH+I + + GE S + +++ K+ EE +Q+YN DET L +K Sbjct: 313 FKASNGWLDRFKKRHAISQVLVLGEIRSADKDAANSYPFWLKKFLEEGCYTADQVYNCDETDLCYK 378 HSP 2 Score: 20.4014 bits (41), Expect = 2.367e-6 Identity = 8/32 (25.00%), Postives = 16/32 (50.00%), Query Frame = 2 Query: 371 GDDTVCKKIKRISAVKVPEVEKAIYLWFLNER 466 G D + + KR+ + ++ +Y WF+ R Sbjct: 253 GQDELGLQRKRVKSASDNVLDSDLYQWFVQAR 284
BLAST of Tigger transposable element-derived protein 2 vs. Planmine SMEST
Match: SMESG000013943.1 (SMESG000013943.1) HSP 1 Score: 50.0618 bits (118), Expect = 4.912e-6 Identity = 32/109 (29.36%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 502 VKALELHRNLNC-NVLFMTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILPEQIYNADETGLVFKNPNSKTLV--SNGEKNAKFKAKQHNVS 819 KA + +R +N + F S+ W+ +FK+RH+I + + GE S + +++ K+ EE +Q+YN DETGL +K ++TL ++ K FK ++ ++ Sbjct: 104 AKAEKFNRRINGEDSKFKASNIWLDRFKKRHTISQVLVSGEIHSADKEDANSYPFLLKKFLEEGCYTADQVYNCDETGLCYKMLPNRTLATKTDNHKREGFKKRKDRLT 212 The following BLAST results are available for this feature:
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Tigger transposable element-derived protein 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Tigger transposable element-derived protein 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Tigger transposable element-derived protein 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020511 ID=SMED30020511|Name=Tigger transposable element-derived protein 2|organism=Schmidtea mediterranea sexual|type=transcript|length=2059bpback to top protein sequence of SMED30020511-orf-1 >SMED30020511-orf-1 ID=SMED30020511-orf-1|Name=SMED30020511-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=101bp MTSHGWIQKFKRRHSIRLLKICGEKLSTNHSGMSTFIEKFKRKPEELQILback to top protein sequence of SMED30020511-orf-2 >SMED30020511-orf-2 ID=SMED30020511-orf-2|Name=SMED30020511-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=121bp MFKKRNENCKNELSFQLQFTNLIKRNFSKTCKIMNYSPNMTSIGPNKDFVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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