Protein archease

Overview
NameProtein archease
Smed IDSMED30020462
Length (bp)536
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protein archease (SMED30020462) t-SNE clustered cells

Violin plots show distribution of expression levels for Protein archease (SMED30020462) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protein archease (SMED30020462) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protein archease (SMED30020462) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30020462

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30020462h1SMcG0009501 SmedASXL_006000SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30020462h1SMcG0009501 dd_Smed_v4_4680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30020462h1SMcG0009501 dd_Smed_v4_4680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30020462h1SMcG0009501 dd_Smed_v4_4680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30020462h1SMcG0009501 dd_Smed_v4_4680_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Protein archease vs. Ensembl Human
Match: ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094])

HSP 1 Score: 183.341 bits (464), Expect = 5.232e-59
Identity = 93/151 (61.59%), Postives = 115/151 (76.16%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            AI  K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:   31 AIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENP-EVFVIIDI 179
[Close]
BLAST of Protein archease vs. Ensembl Human
Match: ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094])

HSP 1 Score: 160.229 bits (404), Expect = 4.865e-50
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1 
Query:   58 AIIMKIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            AI  K  PV  +Y     + ++HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:   28 AIKAKYPPVNRKY-----ECELHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENP-EVFVIIDI 169
[Close]
BLAST of Protein archease vs. Ensembl Human
Match: ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094])

HSP 1 Score: 154.066 bits (388), Expect = 3.992e-48
Identity = 76/128 (59.38%), Postives = 98/128 (76.56%), Query Frame = 1 
Query:  121 IHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            +HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:    6 LHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENP-EVFVIIDI 131
[Close]
BLAST of Protein archease vs. Ensembl Human
Match: ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094])

HSP 1 Score: 132.88 bits (333), Expect = 5.286e-40
Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 1 
Query:  169 IAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:    1 MAMFGYMT-DTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENP-EVFVIIDI 110
[Close]
BLAST of Protein archease vs. Ensembl Human
Match: ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094])

HSP 1 Score: 119.013 bits (297), Expect = 4.849e-34
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIR 336
            AI  K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YM TD  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPRV R
Sbjct:   30 AIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYM-TDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPRVGR 123
[Close]
BLAST of Protein archease vs. Ensembl Celegans
Match: arch-1 (pep chromosome:WBcel235:I:10624464:10625387:1 gene:WBGene00016621.1 transcript:C43H8.1.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arch-1)

HSP 1 Score: 125.946 bits (315), Expect = 3.388e-37
Identity = 62/145 (42.76%), Postives = 94/145 (64.83%), Query Frame = 1 
Query:   70 KIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            +I+  ++EYLDH AD+Q+H+ G T++E+FE   ++MF YMT      EM +    +A G  L+ LL+ F+DE L  F A+P F+ + + I  FD+  F+I   GWGE+FD +KH    ++K+ TYSNMQI+ +    DI+VI+DI
Sbjct:   12 EIERRRFEYLDHPADIQLHSWGSTMEEAFEACLVSMFGYMTDLAKVDEMYEF-YWKASGDSLDGLLFQFLDEALNSFHAEPCFVAKRVEILRFDKKKFEIEFRGWGESFDTSKHETEADIKSPTYSNMQINEKPERCDIYVIVDI 155
[Close]
BLAST of Protein archease vs. Ensembl Fly
Match: Archease (gene:FBgn0038893 transcript:FBtr0084116)

HSP 1 Score: 164.851 bits (416), Expect = 2.808e-52
Identity = 85/144 (59.03%), Postives = 108/144 (75.00%), Query Frame = 1 
Query:   82 VKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMT-TDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQI--HPEKTSNDIFVIIDI 504
            +KYEYLDHTADVQIH  G +LKE+FEQ  +AMF YMT  DY +VE   C  +EA G DLESLL++F+DE LFLFSA+P+ + + + IT+FD  NF+I    +GE F++ KHPQGTEVKAITYS MQI    E ++ ++FVIIDI
Sbjct:   15 MKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYMTELDYVSVE--QCFEIEAHGDDLESLLFHFLDELLFLFSAEPYLVCKKLEITKFDVENFEISCHCYGEPFELGKHPQGTEVKAITYSAMQIIQDVEASNYEVFVIIDI 156
[Close]
BLAST of Protein archease vs. Ensembl Zebrafish
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:550382])

HSP 1 Score: 184.111 bits (466), Expect = 9.733e-60
Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            A+  K  P+  KYEYLDHTADVQIH+ G++L+E+FEQ  + MF YMT D +TVE +D   VE+EG D+ESLLY+F+D+WLF FSAD FFIPR +++   D + +KI S GWGE F INKHPQGTEVKAITYS MQIH E    +IFVIIDI
Sbjct:   14 ALKAKYPPITKKYEYLDHTADVQIHSWGNSLEEAFEQCAMGMFGYMT-DTETVEPIDTVEVESEGDDMESLLYHFLDDWLFKFSADIFFIPREVKVLHIDRMRYKIRSIGWGEEFSINKHPQGTEVKAITYSAMQIH-ETEQPEIFVIIDI 162
[Close]
BLAST of Protein archease vs. Ensembl Xenopus
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:549545])

HSP 1 Score: 184.882 bits (468), Expect = 7.856e-60
Identity = 93/153 (60.78%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:   52 KLAIIMKIDPVK--YEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            ++A+  K  PV   YEYLDHTADVQ+HA G+TL+E+FEQ  +AMF YMT D +TVE LD   V  EG+DL SLL+NF+DEWL+ FSAD +F+PR +++   D +NFKI S GWGE F + KHPQGTEVKAITYS MQIH E+ + ++FVIIDI
Sbjct:   12 QVAVKAKYPPVNKNYEYLDHTADVQLHAWGETLEEAFEQCAMAMFGYMT-DIETVEPLDTVEVVTEGEDLISLLFNFLDEWLYKFSADQYFVPREVKVLNIDRMNFKIRSIGWGEEFSLTKHPQGTEVKAITYSAMQIHEEEKA-EVFVIIDI 162
[Close]
BLAST of Protein archease vs. Ensembl Mouse
Match: Zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356])

HSP 1 Score: 178.333 bits (451), Expect = 2.661e-57
Identity = 90/147 (61.22%), Postives = 113/147 (76.87%), Query Frame = 1 
Query:   70 KIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD +FIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:   23 KYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLRTVEVETQGDDLQSLLFHFLDEWLYKFSADEYFIPREVKVLNIDQKNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEEKP-EVFVIIDI 167
[Close]
BLAST of Protein archease vs. Ensembl Mouse
Match: Zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356])

HSP 1 Score: 146.362 bits (368), Expect = 4.956e-45
Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:   70 KIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKA 435
            K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD +FIPR +++   D+ NFK+ S GWGE F ++KHPQ + + A
Sbjct:   23 KYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLRTVEVETQGDDLQSLLFHFLDEWLYKFSADEYFIPREVKVLNIDQKNFKLRSIGWGEEFSLSKHPQQSRLLA 145
[Close]
BLAST of Protein archease vs. Ensembl Mouse
Match: Zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356])

HSP 1 Score: 114.39 bits (285), Expect = 1.328e-32
Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:   70 KIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIR 336
            K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YM TD  TVE L    VE +G DL+SLL++F+DEWL+ FSAD +FIPRV R
Sbjct:   23 KYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYM-TDTGTVEPLRTVEVETQGDDLQSLLFHFLDEWLYKFSADEYFIPRVGR 112
[Close]
BLAST of Protein archease vs. UniProt/SwissProt
Match: sp|Q566V0|ARCH_DANRE (Protein archease OS=Danio rerio OX=7955 GN=zbtb8os PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 7.347e-59
Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            A+  K  P+  KYEYLDHTADVQIH+ G++L+E+FEQ  + MF YMT D +TVE +D   VE+EG D+ESLLY+F+D+WLF FSAD FFIPR +++   D + +KI S GWGE F INKHPQGTEVKAITYS MQIH E    +IFVIIDI
Sbjct:   14 ALKAKYPPITKKYEYLDHTADVQIHSWGNSLEEAFEQCAMGMFGYMT-DTETVEPIDTVEVESEGDDMESLLYHFLDDWLFKFSADIFFIPREVKVLHIDRMRYKIRSIGWGEEFSINKHPQGTEVKAITYSAMQIH-ETEQPEIFVIIDI 162
[Close]
BLAST of Protein archease vs. UniProt/SwissProt
Match: sp|Q8IWT0|ARCH_HUMAN (Protein archease OS=Homo sapiens OX=9606 GN=ZBTB8OS PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 2.599e-58
Identity = 93/151 (61.59%), Postives = 115/151 (76.16%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            AI  K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:   19 AIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENP-EVFVIIDI 167
[Close]
BLAST of Protein archease vs. UniProt/SwissProt
Match: sp|Q2YDE7|ARCH_BOVIN (Protein archease OS=Bos taurus OX=9913 GN=ZBTB8OS PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 3.129e-58
Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            AI  K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD FFIPR +++   D+ NFKI S GWGE F ++KHPQGTEVKAITYS MQ++ E+   ++FVIIDI
Sbjct:   19 AIKAKYPPVSRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLQTIEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLNIDQRNFKIRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEEKP-EVFVIIDI 167
[Close]
BLAST of Protein archease vs. UniProt/SwissProt
Match: sp|Q505B7|ARCH_MOUSE (Protein archease OS=Mus musculus OX=10090 GN=Zbtb8os PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 5.237e-57
Identity = 90/147 (61.22%), Postives = 111/147 (75.51%), Query Frame = 1 
Query:   70 KIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            K  PV  KYEYLDHTADVQ+HA GDTL+E+FEQ  +AMF YMT D  TVE L    VE +G DL+SLL++F+DEWL+ FSAD +FIPR +++   D+ NFK+ S GWGE F ++KHPQGTEVKAITYS MQ++ E+     FVIIDI
Sbjct:   23 KYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMT-DTGTVEPLRTVEVETQGDDLQSLLFHFLDEWLYKFSADEYFIPREVKVLNIDQKNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEEKPEVFFVIIDI 168
[Close]
BLAST of Protein archease vs. UniProt/SwissProt
Match: sp|Q2EGP9|ARCH_ICTPU (Protein archease OS=Ictalurus punctatus OX=7998 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.677e-56
Identity = 87/140 (62.14%), Postives = 110/140 (78.57%), Query Frame = 1 
Query:   85 KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            KYEYLDHTADVQ+H+ GDTL+E+FEQ  +AMF YMT D +TVE +D   +E+EG DLESLL++F+D+WLF FSAD FF+PR +++ + D + F I S GWGE F++ KHPQGTEVKAITYS MQI  +K   +IF IIDI
Sbjct:   25 KYEYLDHTADVQLHSWGDTLEEAFEQCAMAMFGYMT-DTETVEPIDTIEIESEGDDLESLLFHFLDDWLFKFSADAFFVPREVKVLQLDRMRFTIRSIGWGEEFNLAKHPQGTEVKAITYSAMQI-CDKEKPEIFAIIDI 162
[Close]
BLAST of Protein archease vs. TrEMBL
Match: A0A4S2LWY8 (Archease domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005738 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.263e-66
Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1 
Query:   70 KIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            +I  VKYEYLDHTADVQ+H+ GDTLKE+FEQ  +AMF YMTT+YD+VEML+    EA+G+D  SLLY+F+DEWLF FSA+P+FIPRVI ITEFD  NF+I S GWGE F + KHPQGTEVKAITYSNMQIH ++  +++FVIIDI
Sbjct:    9 EIPVVKYEYLDHTADVQLHSWGDTLKEAFEQIAMAMFGYMTTNYDSVEMLEPYETEAKGEDSLSLLYHFLDEWLFAFSAEPYFIPRVIYITEFDMENFRIKSVGWGEPFQLGKHPQGTEVKAITYSNMQIHDKEDQHELFVIIDI 153
[Close]
BLAST of Protein archease vs. TrEMBL
Match: A0A0B6ZKP3 (Archease domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF68861 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.128e-65
Identity = 104/144 (72.22%), Postives = 117/144 (81.25%), Query Frame = 1 
Query:   73 IDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            I  VKYEYLDHTADVQ+H+ G  LKESFEQ  IAMFNYMTTDY TVEM     +E  G D+ SLLY+F+DE+LFLFSADPFFIPRVI+I EFD  NFKI ++G+GE FDI KHPQGTEVKAITYSNMQ+H    +NDIFVIIDI
Sbjct:   21 IPEVKYEYLDHTADVQLHSWGCHLKESFEQVGIAMFNYMTTDYSTVEMKYVHEIEISGDDILSLLYHFLDEFLFLFSADPFFIPRVIKIVEFDLENFKIKAKGFGEPFDIAKHPQGTEVKAITYSNMQVHQTMDTNDIFVIIDI 164
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BLAST of Protein archease vs. TrEMBL
Match: A0A2C9M582 (Archease domain-containing protein OS=Biomphalaria glabrata OX=6526 GN=106080328 PE=4 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 4.241e-65
Identity = 98/144 (68.06%), Postives = 118/144 (81.94%), Query Frame = 1 
Query:   73 IDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            I PV+YEYLDHTADVQ+H+ G +LKESFEQ   AMFNYMTTDY+TVEM +   +E    DL SLLY+F+DE+LFLFSA+PF IPRV++ITE D  NFKI + G+GE FDI KHPQGTEVKAITYSNMQ+H +  ++D+FVIIDI
Sbjct:   20 IPPVQYEYLDHTADVQLHSWGSSLKESFEQVATAMFNYMTTDYNTVEMKEVHEIEVTADDLLSLLYHFLDEFLFLFSAEPFIIPRVVQITEIDLDNFKIKARGFGEPFDIAKHPQGTEVKAITYSNMQVHSDSPTHDVFVIIDI 163
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BLAST of Protein archease vs. TrEMBL
Match: A0A3S0Z8F3 (Archease domain-containing protein OS=Elysia chlorotica OX=188477 GN=EGW08_023035 PE=4 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 6.222e-65
Identity = 99/145 (68.28%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:   70 KIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            KI   K+EYLDHTADVQ+HA G  LKES+EQ  +AMFNYMTTDY  VEM     VE  G+DL SLLY F+DE+LF+FSA+PF+IPRV++ITEFD  NFKI ++G+GE FDI+KHPQGTEVKAITYSNMQ+H +K  +D+FVIIDI
Sbjct:   18 KIPEEKFEYLDHTADVQLHAWGADLKESYEQVAMAMFNYMTTDYSKVEMKHVYEVEVSGEDLLSLLYQFLDEFLFIFSAEPFYIPRVVQITEFDTENFKIKAKGFGEPFDISKHPQGTEVKAITYSNMQVHADKEMHDVFVIIDI 162
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BLAST of Protein archease vs. TrEMBL
Match: A0A210QWK3 (Protein archease OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT24080 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.042e-64
Identity = 100/145 (68.97%), Postives = 119/145 (82.07%), Query Frame = 1 
Query:   70 KIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            +I  +KY+YLDHTADVQ+++ GD L E+FEQ   AMF YMTTDYDTVEM   +  EAEG+D++ LL++F+DEWLF+FSADPFFIPR I ITEFD  NFKI S+G+GE F I KHPQGTEVKAITYSNMQIH +K  N+IFVIIDI
Sbjct:   10 EIPEIKYQYLDHTADVQLYSWGDNLTEAFEQVATAMFGYMTTDYDTVEMTSVEETEAEGEDMQQLLFHFLDEWLFVFSADPFFIPRKIVITEFDRENFKIKSKGYGEEFVIGKHPQGTEVKAITYSNMQIHEDK--NEIFVIIDI 152
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BLAST of Protein archease vs. Ensembl Cavefish
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:103046120])

HSP 1 Score: 184.882 bits (468), Expect = 4.373e-60
Identity = 96/162 (59.26%), Postives = 119/162 (73.46%), Query Frame = 1 
Query:   25 RLLNFNFAVKLAIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            R L+   A K  I  K  P+  KYEYLDHTADVQ+H+ GD+L+E+FEQ  +AMF YMT D +TVE  D   VE+EG+DLESLL++F+D+WLF FSAD FFIPR +++   D + FKI S GWGE F +NKHPQGTEVKAITYS MQI  +   ++I VIIDI
Sbjct:    4 RELDLTEAQK-KIKSKYPPINKKYEYLDHTADVQLHSWGDSLEEAFEQCAMAMFGYMT-DTETVEPTDTIEVESEGEDLESLLFHFLDDWLFKFSADVFFIPREVKVVHLDRMGFKIRSIGWGEEFSLNKHPQGTEVKAITYSAMQIRDDDEKSEILVIIDI 163
[Close]
BLAST of Protein archease vs. Ensembl Cavefish
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:103046120])

HSP 1 Score: 157.147 bits (396), Expect = 4.710e-49
Identity = 89/162 (54.94%), Postives = 111/162 (68.52%), Query Frame = 1 
Query:   25 RLLNFNFAVKLAIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            R L+   A K  I  K  P+  KYEYLDHTADVQ+H+ GD+L+E+FEQ  +AMF YMT D +TVE  D   VE+EG+DLESLL++F+D+WLF FSAD FFIPR +++   D + FKI S G    F      QGTEVKAITYS MQI  +   ++I VIIDI
Sbjct:    9 RELDLTEAQK-KIKSKYPPINKKYEYLDHTADVQLHSWGDSLEEAFEQCAMAMFGYMT-DTETVEPTDTIEVESEGEDLESLLFHFLDDWLFKFSADVFFIPREVKVVHLDRMGFKIRSIGLTVCF----LSQGTEVKAITYSAMQIRDDDEKSEILVIIDI 164
[Close]
BLAST of Protein archease vs. Ensembl Sea Lamprey
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:550382])

HSP 1 Score: 188.734 bits (478), Expect = 3.580e-62
Identity = 90/139 (64.75%), Postives = 109/139 (78.42%), Query Frame = 1 
Query:   85 KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIID 501
            K+EYLDHTADVQ+HA GDTL+ESFEQ  +AMF Y++ D + VE LD   VEAEG+D+ SLLY FMD WL+ F A+ FFIPR +++   D +NFKI S GWGE F++ KHPQGTEVKAITYS MQIH E+  ND+FVIID
Sbjct:   35 KHEYLDHTADVQLHAWGDTLEESFEQVVMAMFGYIS-DIEVVEPLDTVEVEAEGEDMMSLLYQFMDAWLYKFCAEIFFIPREVKVVSLDRVNFKIRSIGWGEEFNLEKHPQGTEVKAITYSAMQIHEEENKNDVFVIID 172
[Close]
BLAST of Protein archease vs. Ensembl Medaka
Match: zbtb8os (zinc finger and BTB domain containing 8 opposite strand [Source:NCBI gene;Acc:101154822])

HSP 1 Score: 182.956 bits (463), Expect = 2.265e-59
Identity = 92/151 (60.93%), Postives = 117/151 (77.48%), Query Frame = 1 
Query:   58 AIIMKIDPV--KYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            A+  K  P+  KYEYLDHTADVQIH+ GD+L+E+FEQ  + MF YMT D +TVE LD   VE+EG+D+ESLL++F+D+WL+ FSAD FF+PR I++   D +++KI S GWGE F I+KHPQGTEVKAITYS MQIH +K   +IF IIDI
Sbjct:   14 AVKSKYPPINKKYEYLDHTADVQIHSWGDSLEEAFEQCAMGMFGYMT-DTETVEPLDTVEVESEGEDMESLLFHFLDDWLYKFSADLFFVPREIKVLHIDRMHYKIRSIGWGEEFSISKHPQGTEVKAITYSAMQIH-DKEKPEIFTIIDI 162
[Close]
BLAST of Protein archease vs. Planmine SMEST
Match: SMESG000051205.1 (SMESG000051205.1)

HSP 1 Score: 300.056 bits (767), Expect = 6.707e-106
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 1 
Query:   67 MKIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 504
            MKI PVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI
Sbjct:    1 MKIAPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEMLDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFKIVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI 146
The following BLAST results are available for this feature:
BLAST of Protein archease vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ZBTB8OS5.232e-5961.59zinc finger and BTB domain containing 8 opposite s... [more]
ZBTB8OS4.865e-5055.03zinc finger and BTB domain containing 8 opposite s... [more]
ZBTB8OS3.992e-4859.38zinc finger and BTB domain containing 8 opposite s... [more]
ZBTB8OS5.286e-4058.93zinc finger and BTB domain containing 8 opposite s... [more]
ZBTB8OS4.849e-3465.26zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
arch-13.388e-3742.76pep chromosome:WBcel235:I:10624464:10625387:1 gene... [more]
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BLAST of Protein archease vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Archease2.808e-5259.03gene:FBgn0038893 transcript:FBtr0084116[more]
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BLAST of Protein archease vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zbtb8os9.733e-6062.25zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zbtb8os7.856e-6060.78zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Zbtb8os2.661e-5761.22zinc finger and BTB domain containing 8 opposite s... [more]
Zbtb8os4.956e-4558.06zinc finger and BTB domain containing 8 opposite s... [more]
Zbtb8os1.328e-3264.84zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q566V0|ARCH_DANRE7.347e-5962.25Protein archease OS=Danio rerio OX=7955 GN=zbtb8os... [more]
sp|Q8IWT0|ARCH_HUMAN2.599e-5861.59Protein archease OS=Homo sapiens OX=9606 GN=ZBTB8O... [more]
sp|Q2YDE7|ARCH_BOVIN3.129e-5862.25Protein archease OS=Bos taurus OX=9913 GN=ZBTB8OS ... [more]
sp|Q505B7|ARCH_MOUSE5.237e-5761.22Protein archease OS=Mus musculus OX=10090 GN=Zbtb8... [more]
sp|Q2EGP9|ARCH_ICTPU1.677e-5662.14Protein archease OS=Ictalurus punctatus OX=7998 PE... [more]
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BLAST of Protein archease vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2LWY84.263e-6668.97Archease domain-containing protein OS=Opisthorchis... [more]
A0A0B6ZKP31.128e-6572.22Archease domain-containing protein OS=Arion vulgar... [more]
A0A2C9M5824.241e-6568.06Archease domain-containing protein OS=Biomphalaria... [more]
A0A3S0Z8F36.222e-6568.28Archease domain-containing protein OS=Elysia chlor... [more]
A0A210QWK31.042e-6468.97Protein archease OS=Mizuhopecten yessoensis OX=657... [more]
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BLAST of Protein archease vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
zbtb8os4.373e-6059.26zinc finger and BTB domain containing 8 opposite s... [more]
zbtb8os4.710e-4954.94zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zbtb8os3.580e-6264.75zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein archease vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein archease vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zbtb8os2.265e-5960.93zinc finger and BTB domain containing 8 opposite s... [more]
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BLAST of Protein archease vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000051205.16.707e-10699.32SMESG000051205.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30020462 ID=SMED30020462|Name=Protein archease|organism=Schmidtea mediterranea sexual|type=transcript|length=536bp
GTTGTTTAAATTTTCTTGCTTAAGCGATTGCTAAATTTCAATTTTGCTGT
AAAATTAGCAATCATAATGAAAATAGATCCTGTAAAATATGAATATTTAG
ACCACACTGCAGATGTACAAATTCATGCAATAGGAGATACATTAAAAGAG
TCTTTCGAACAAGCAACTATTGCGATGTTTAACTATATGACAACGGACTA
TGATACAGTTGAGATGCTAGATTGTCAAGTTGTAGAAGCTGAAGGCCAAG
ATCTTGAATCACTTTTATACAATTTCATGGATGAGTGGCTATTTTTGTTT
AGTGCTGATCCATTTTTTATTCCTCGAGTTATCAGAATAACTGAATTCGA
TGAAATTAACTTTAAAATTGTATCCGAAGGATGGGGTGAAGCTTTTGACA
TTAATAAGCATCCTCAAGGCACCGAAGTCAAAGCGATTACTTATTCAAAC
ATGCAAATTCATCCTGAGAAGACTTCAAATGATATTTTTGTAATAATTGA
TATTTGAATAAAATATTTTGTTATTGAAAAAAAAAG
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protein sequence of SMED30020462-orf-1

>SMED30020462-orf-1 ID=SMED30020462-orf-1|Name=SMED30020462-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=147bp
MKIDPVKYEYLDHTADVQIHAIGDTLKESFEQATIAMFNYMTTDYDTVEM
LDCQVVEAEGQDLESLLYNFMDEWLFLFSADPFFIPRVIRITEFDEINFK
IVSEGWGEAFDINKHPQGTEVKAITYSNMQIHPEKTSNDIFVIIDI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR036820Archease_dom_sf
IPR002804Archease
IPR023572Archease_dom
IPR013809ENTH
Vocabulary: biological process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033tRNA processing
Vocabulary: molecular function
TermDefinition
GO:0046872metal ion binding
Vocabulary: cellular component
TermDefinition
GO:0072669tRNA-splicing ligase complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036820Archease domain superfamilyGENE3DG3DSA:3.55.10.10coord: 6..146
e-value: 1.9E-42
score: 146.6
IPR036820Archease domain superfamilySUPERFAMILYSSF69819MTH1598-likecoord: 6..146
IPR023572Archease domainPFAMPF01951Archeasecoord: 8..146
e-value: 4.4E-42
score: 143.6
IPR002804ArcheasePANTHERPTHR12682ARCHEASEcoord: 5..146
NoneNo IPR availablePRODOMPD012969coord: 35..145
e-value: 1.0E-40
score: 415.0