soxP-5

Overview


Name	soxP-5 (AFJ24768.1)
Smed ID	SMED30020283
Length (bp)	1695

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of soxP-5 (SMED30020283) t-SNE clustered cells

Violin plots show distribution of expression levels for soxP-5 (SMED30020283) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of soxP-5 (SMED30020283) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for soxP-5 (SMED30020283) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30020283

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30020283	h1SMcG0008523	SmedASXL_012220	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30020283	h1SMcG0008523	SmedASXL_012220	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
muscle cell	SMED30020283	h1SMcG0008523	dd_Smed_v4_9050_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30020283	h1SMcG0008523	dd_Smed_v4_9050_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of soxP-5 vs. Ensembl Human
Match: SOX5 (SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201])

HSP 1 Score: 171.785 bits (434), Expect = 1.623e-47
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  150 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 270

[Close]

BLAST of soxP-5 vs. Ensembl Human
Match: SOX5 (SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201])

HSP 1 Score: 172.94 bits (437), Expect = 5.074e-46
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  415 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 535

[Close]

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  415 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 535

[Close]

BLAST of soxP-5 vs. Ensembl Human
Match: SOX5 (SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201])

HSP 1 Score: 173.326 bits (438), Expect = 1.069e-45
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  501 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 621

[Close]

BLAST of soxP-5 vs. Ensembl Human
Match: SOX5 (SRY-box transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:11201])

HSP 1 Score: 173.326 bits (438), Expect = 1.078e-45
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  523 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 643

[Close]

BLAST of soxP-5 vs. Ensembl Celegans
Match: egl-13 (Transcription factor egl-13 [Source:UniProtKB/Swiss-Prot;Acc:Q23045])

HSP 1 Score: 172.94 bits (437), Expect = 4.712e-49
Identity = 73/103 (70.87%), Postives = 92/103 (89.32%), Query Frame = 1

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  170 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 272

[Close]

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  170 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 272

[Close]

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  170 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 272

[Close]

BLAST of soxP-5 vs. Ensembl Celegans
Match: egl-13 (Transcription factor egl-13 [Source:UniProtKB/Swiss-Prot;Acc:Q23045])

HSP 1 Score: 172.555 bits (436), Expect = 5.260e-49
Identity = 73/103 (70.87%), Postives = 92/103 (89.32%), Query Frame = 1

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  173 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 275

[Close]

BLAST of soxP-5 vs. Ensembl Celegans
Match: egl-13 (Transcription factor egl-13 [Source:UniProtKB/Swiss-Prot;Acc:Q23045])

HSP 1 Score: 172.555 bits (436), Expect = 6.507e-49
Identity = 73/103 (70.87%), Postives = 92/103 (89.32%), Query Frame = 1

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  176 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 278

[Close]

BLAST of soxP-5 vs. Ensembl Fly
Match: Sox102F (gene:FBgn0039938 transcript:FBtr0089252)

HSP 1 Score: 180.259 bits (456), Expect = 2.843e-49
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDL 1308
            H+KRPMNAFMVW+++ER KILKACPDMHNSNISK+LG +WK MS  DK+PYYEEQSRLS+ HME+HPDYRY+PRPKRTCI++G+K+RISEYK L++ R+++M  L
Sbjct:  384 HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQL 488

[Close]

BLAST of soxP-5 vs. Ensembl Fly
Match: Sox102F (gene:FBgn0039938 transcript:FBtr0334488)

HSP 1 Score: 180.259 bits (456), Expect = 2.843e-49
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDL 1308
            H+KRPMNAFMVW+++ER KILKACPDMHNSNISK+LG +WK MS  DK+PYYEEQSRLS+ HME+HPDYRY+PRPKRTCI++G+K+RISEYK L++ R+++M  L
Sbjct:  384 HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQL 488

[Close]

BLAST of soxP-5 vs. Ensembl Fly
Match: Sox102F (gene:FBgn0039938 transcript:FBtr0334489)

HSP 1 Score: 180.259 bits (456), Expect = 2.843e-49
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDL 1308
            H+KRPMNAFMVW+++ER KILKACPDMHNSNISK+LG +WK MS  DK+PYYEEQSRLS+ HME+HPDYRY+PRPKRTCI++G+K+RISEYK L++ R+++M  L
Sbjct:  384 HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQL 488

[Close]

BLAST of soxP-5 vs. Ensembl Fly
Match: Sox102F (gene:FBgn0039938 transcript:FBtr0100600)

HSP 1 Score: 179.874 bits (455), Expect = 5.801e-49
Identity = 76/105 (72.38%), Postives = 95/105 (90.48%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDL 1308
            H+KRPMNAFMVW+++ER KILKACPDMHNSNISK+LG +WK MS  DK+PYYEEQSRLS+ HME+HPDYRY+PRPKRTCI++G+K+RISEYK L++ R+++M  L
Sbjct:  422 HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQL 526

[Close]

BLAST of soxP-5 vs. Ensembl Fly
Match: D (gene:FBgn0000411 transcript:FBtr0333036)

HSP 1 Score: 103.605 bits (257), Expect = 1.093e-23
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 1

Query:  958 ANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPK 1221
            A  PG+      H+KRPMNAFMVWSR +R +I K  P MHNS ISK LG +WK ++  +KRP+ +E  RL   HM+EHPDY+Y+PR K
Sbjct:  133 ATSPGQ----EGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 216

[Close]

BLAST of soxP-5 vs. Ensembl Zebrafish
Match: sox5 (SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13])

HSP 1 Score: 169.859 bits (429), Expect = 1.155e-44
Identity = 68/102 (66.67%), Postives = 93/102 (91.18%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 656

[Close]

BLAST of soxP-5 vs. Ensembl Zebrafish
Match: sox5 (SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13])

HSP 1 Score: 169.859 bits (429), Expect = 1.193e-44
Identity = 68/102 (66.67%), Postives = 93/102 (91.18%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  557 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 658

[Close]

BLAST of soxP-5 vs. Ensembl Zebrafish
Match: sox13 (SRY-box transcription factor 13 [Source:ZFIN;Acc:ZDB-GENE-100519-1])

HSP 1 Score: 164.466 bits (415), Expect = 1.315e-43
Identity = 70/109 (64.22%), Postives = 93/109 (85.32%), Query Frame = 1

Query:  979 ENRT---NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSK 1296
            E+RT    H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+ +
Sbjct:  370 ESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQE 478

[Close]

Query:  979 ENRT---NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSK 1296
            E+RT    H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+ +
Sbjct:  370 ESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQE 478

[Close]

BLAST of soxP-5 vs. Ensembl Zebrafish
Match: sox13 (SRY-box transcription factor 13 [Source:ZFIN;Acc:ZDB-GENE-100519-1])

HSP 1 Score: 164.851 bits (416), Expect = 1.461e-43
Identity = 70/107 (65.42%), Postives = 92/107 (85.98%), Query Frame = 1

Query:  979 ENRT---NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            E+RT    H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+
Sbjct:  400 ESRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRR 506

[Close]

BLAST of soxP-5 vs. Ensembl Xenopus
Match: sox5 (SRY-box 5 [Source:NCBI gene;Acc:100038209])

HSP 1 Score: 170.244 bits (430), Expect = 8.066e-45
Identity = 74/122 (60.66%), Postives = 102/122 (83.61%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSK 1296
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +
Sbjct:  471 GISESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQQ 590

[Close]

BLAST of soxP-5 vs. Ensembl Xenopus
Match: sox5 (SRY-box 5 [Source:NCBI gene;Acc:100038209])

HSP 1 Score: 170.244 bits (430), Expect = 8.603e-45
Identity = 74/122 (60.66%), Postives = 102/122 (83.61%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSK 1296
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +
Sbjct:  478 GISESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQQ 597

[Close]

BLAST of soxP-5 vs. Ensembl Xenopus
Match: wasf1 (WASP family member 1 [Source:Xenbase;Acc:XB-GENE-978145])

HSP 1 Score: 167.162 bits (422), Expect = 1.572e-44
Identity = 69/103 (66.99%), Postives = 91/103 (88.35%), Query Frame = 1

Query:  982 NRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            +R +H+KRPMNAFMVW+++ER KIL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ G++LR+ EYK L+K R+
Sbjct:  355 SRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGKRLRVGEYKALMKNRR 457

[Close]

BLAST of soxP-5 vs. Ensembl Xenopus
Match: wasf1 (WASP family member 1 [Source:Xenbase;Acc:XB-GENE-978145])

HSP 1 Score: 166.777 bits (421), Expect = 2.384e-44
Identity = 69/103 (66.99%), Postives = 91/103 (88.35%), Query Frame = 1

Query:  982 NRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            +R +H+KRPMNAFMVW+++ER KIL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ G++LR+ EYK L+K R+
Sbjct:  367 SRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGKRLRVGEYKALMKNRR 469

[Close]

BLAST of soxP-5 vs. Ensembl Xenopus
Match: wasf1 (WASP family member 1 [Source:Xenbase;Acc:XB-GENE-978145])

HSP 1 Score: 166.777 bits (421), Expect = 3.168e-44
Identity = 69/103 (66.99%), Postives = 91/103 (88.35%), Query Frame = 1

Query:  982 NRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            +R +H+KRPMNAFMVW+++ER KIL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ G++LR+ EYK L+K R+
Sbjct:  384 SRGSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGKRLRVGEYKALMKNRR 486

[Close]

BLAST of soxP-5 vs. Ensembl Mouse
Match: Sox5 (SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367])

HSP 1 Score: 172.17 bits (435), Expect = 1.149e-47
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  165 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 285

[Close]

BLAST of soxP-5 vs. Ensembl Mouse
Match: Sox5 (SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367])

HSP 1 Score: 172.555 bits (436), Expect = 7.698e-46
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  452 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 572

[Close]

BLAST of soxP-5 vs. Ensembl Mouse
Match: Sox5 (SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367])

HSP 1 Score: 172.555 bits (436), Expect = 9.883e-46
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  487 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 607

[Close]

BLAST of soxP-5 vs. Ensembl Mouse
Match: Sox5 (SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367])

HSP 1 Score: 172.555 bits (436), Expect = 9.969e-46
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  488 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 608

[Close]

BLAST of soxP-5 vs. Ensembl Mouse
Match: Sox5 (SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367])

HSP 1 Score: 172.94 bits (437), Expect = 1.013e-45
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  536 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 656

[Close]

BLAST of soxP-5 vs. UniProt/SwissProt
Match: sp|Q23045|EGL13_CAEEL (Transcription factor egl-13 OS=Caenorhabditis elegans OX=6239 GN=egl-13 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.017e-46
Identity = 73/103 (70.87%), Postives = 92/103 (89.32%), Query Frame = 1

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            NH+KRPMNAFMVW+R+ER KILKA PDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTC+I+G+K+R++EYK ++K +K  M
Sbjct:  327 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCVIDGKKVRVNEYKTIMKTKKDLM 429

[Close]

BLAST of soxP-5 vs. UniProt/SwissProt
Match: sp|P35711|SOX5_HUMAN (Transcription factor SOX-5 OS=Homo sapiens OX=9606 GN=SOX5 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 6.440e-45
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  536 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 656

[Close]

BLAST of soxP-5 vs. UniProt/SwissProt
Match: sp|P35710|SOX5_MOUSE (Transcription factor SOX-5 OS=Mus musculus OX=10090 GN=Sox5 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.954e-45
Identity = 75/123 (60.98%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  536 GVSESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEM 656

[Close]

BLAST of soxP-5 vs. UniProt/SwissProt
Match: sp|B3DM43|SOX5_XENTR (Transcription factor Sox-5 OS=Xenopus tropicalis OX=8364 GN=sox5 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.018e-44
Identity = 74/122 (60.66%), Postives = 102/122 (83.61%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSK 1296
            G+  +RI R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +
Sbjct:  537 GISESRIYRESR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQQ 656

[Close]

BLAST of soxP-5 vs. UniProt/SwissProt
Match: sp|P40647|SOX5_XENLA (Transcription factor Sox-5 OS=Xenopus laevis OX=8355 GN=sox5 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 4.955e-44
Identity = 74/120 (61.67%), Postives = 100/120 (83.33%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            G+  +RI R  R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+
Sbjct:  539 GISESRIYREAR-GRGSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRR 656

[Close]

BLAST of soxP-5 vs. TrEMBL
Match: I1ZIB4 (SoxP-5 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1

Query:  583 DYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMXXXXXXXXXXXXXXXXXXXMPRAGNSPITPSYNSSVSSDYADFNERKIXXXXXXXXXXXXXXXXXXXXXXXXXXEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 1602
            DYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC
Sbjct:    4 DYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 343

[Close]

BLAST of soxP-5 vs. TrEMBL
Match: A0A1V9X4F2 (HMG box domain-containing protein (Fragment) OS=Tropilaelaps mercedesae OX=418985 GN=BIW11_02022 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 9.413e-53
Identity = 84/122 (68.85%), Postives = 106/122 (86.89%), Query Frame = 1

Query:  934 LLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            LL A++IRA R  +  +R +H+KRPMNAFMVW+++ER KILKACPDMHNSNISK+LG +WK MS  +K+PYYEEQSRLS+ HME+HPDYRY+PRPKRTCI++G+KLRISEYK L+K R+ +M
Sbjct:  111 LLGAKVIRAGR--DPVDRKHHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKLRISEYKTLMKQRREEM 230

[Close]

BLAST of soxP-5 vs. TrEMBL
Match: A0A1I8H6R3 (HMG box domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 6.618e-52
Identity = 80/100 (80.00%), Postives = 94/100 (94.00%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKS 1293
            HVKRPMNAFMVW+REER KILKACPDMHNSNISK+LG KWK M+A +K+P+YEEQSRLS+ HME+HPDYRY+PRPKRTCI++GRKLRISEYKDL+K R++
Sbjct:   40 HVKRPMNAFMVWAREERRKILKACPDMHNSNISKILGAKWKAMTAEEKQPFYEEQSRLSKIHMEQHPDYRYRPRPKRTCIMDGRKLRISEYKDLVKGRRA 139

[Close]

BLAST of soxP-5 vs. TrEMBL
Match: A0A3P7LXS8 (HMG box domain-containing protein (Fragment) OS=Dibothriocephalus latus OX=60516 GN=DILT_LOCUS6792 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.625e-51
Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 1

Query:  970 GEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKS 1293
            G++  R  H+KRPMNAFMVW+REER KILKACPDMHNSNISK+LG KWK MS  +K+PYYEEQSRLSR+HMEEHPDYRY+PRPKRTCI++GRKLRISEYK+L++ R++
Sbjct:   24 GKVSKRF-HIKRPMNAFMVWAREERRKILKACPDMHNSNISKILGAKWKAMSTEEKKPYYEEQSRLSRKHMEEHPDYRYRPRPKRTCIVDGRKLRISEYKELMRSRRT 130

[Close]

BLAST of soxP-5 vs. TrEMBL
Match: A0A183TDV2 (HMG box domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS14650 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.655e-51
Identity = 82/104 (78.85%), Postives = 95/104 (91.35%), Query Frame = 1

Query:  970 GEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIK 1281
            G+I  R  H+KRPMNAFMVW+REER KILKACPDMHNSNISK+LG KWK MS  +K+PYYEEQSRLSR+HMEEHPDYRY+PRPKRTCI++GRKLRISEYK+L++
Sbjct:   22 GKISKRF-HIKRPMNAFMVWAREERRKILKACPDMHNSNISKILGAKWKAMSTEEKKPYYEEQSRLSRKHMEEHPDYRYRPRPKRTCIVDGRKLRISEYKELMR 124

[Close]

BLAST of soxP-5 vs. Ensembl Cavefish
Match: sox5 (SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13])

HSP 1 Score: 170.629 bits (431), Expect = 6.251e-45
Identity = 68/102 (66.67%), Postives = 93/102 (91.18%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  556 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 657

[Close]

BLAST of soxP-5 vs. Ensembl Cavefish
Match: sox5 (SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13])

HSP 1 Score: 170.244 bits (430), Expect = 6.817e-45
Identity = 68/102 (66.67%), Postives = 93/102 (91.18%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  530 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 631

[Close]

BLAST of soxP-5 vs. Ensembl Cavefish
Match: sox13 (SRY-box transcription factor 13 [Source:NCBI gene;Acc:103022571])

HSP 1 Score: 164.466 bits (415), Expect = 1.462e-43
Identity = 67/101 (66.34%), Postives = 89/101 (88.12%), Query Frame = 1

Query:  988 TNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            + H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+
Sbjct:  397 SGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRR 497

[Close]

BLAST of soxP-5 vs. Ensembl Cavefish
Match: sox13 (SRY-box transcription factor 13 [Source:NCBI gene;Acc:103022571])

HSP 1 Score: 164.851 bits (416), Expect = 1.476e-43
Identity = 67/101 (66.34%), Postives = 89/101 (88.12%), Query Frame = 1

Query:  988 TNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            + H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+
Sbjct:  426 SGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRR 526

[Close]

BLAST of soxP-5 vs. Ensembl Cavefish
Match: sox13 (SRY-box transcription factor 13 [Source:NCBI gene;Acc:103022571])

HSP 1 Score: 164.851 bits (416), Expect = 1.586e-43
Identity = 67/101 (66.34%), Postives = 89/101 (88.12%), Query Frame = 1

Query:  988 TNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRK 1290
            + H+KRPMNAFMVW+++ER +IL+A PDMHNS+ISK+LG +WK MS  +K+PYYEEQ+RLSRQH+E +PDY+YKPRPKRTCI+ GR+LR+ EYK ++K R+
Sbjct:  434 SGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRR 534

[Close]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008165.1 (pep scaffold:Pmarinus_7.0:GL479973:18969:29522:-1 gene:ENSPMAG00000007384.1 transcript:ENSPMAT00000008165.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 159.073 bits (401), Expect = 5.379e-46
Identity = 65/103 (63.11%), Postives = 89/103 (86.41%), Query Frame = 1

Query:  994 HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMP 1302
            H+KRPMNAFMVW+++ER KIL+A PDMHNS+ISK+LG +WK MS+ +K+PYYEEQ+RLS+ H+E +P Y+Y+PRPKRTCI++GR+LR+ EYK L++ R+   P
Sbjct:   60 HIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKAMSSQEKQPYYEEQARLSKLHLERYPGYKYRPRPKRTCIVDGRRLRVGEYKALMRSRREGGP 162

[Close]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006684.1 (pep scaffold:Pmarinus_7.0:GL477399:28105:35473:-1 gene:ENSPMAG00000006026.1 transcript:ENSPMAT00000006684.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 149.058 bits (375), Expect = 2.240e-41
Identity = 68/121 (56.20%), Postives = 94/121 (77.69%), Query Frame = 1

Query:  940 NARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDM-HNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            +AR+ R +R     +   H+KRPMNAFMVW+++ER KIL+A PDM H   IS+  G +WK MS  +K+PYYEEQ+RLS+ H+E++PDY+YKPRPKRTCI++G+KLRI EYK L++ R+ +M
Sbjct:   44 DARVFRESR--SRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMKHTLQISECPGSRWKSMSNQEKQPYYEEQARLSKLHLEKYPDYKYKPRPKRTCIVDGKKLRIGEYKALMRNRRQEM 162

[Close]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Match: sox4b (SRY-box transcription factor 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274])

HSP 1 Score: 106.686 bits (265), Expect = 2.614e-25
Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 1

Query:  958 ANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPK 1221
            A  PG  +  + H+KRPMNAFMVWS+ ER KI++  PDMHN+ ISK LG++WK++   +K P+  E  RL  +HM ++PDY+Y+PR K
Sbjct:   49 APGPGWCKTASGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGRRWKQLKESEKVPFIREAERLRLKHMADYPDYKYRPRKK 136

[Close]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Match: sox1b (SRY-box transcription factor 1b [Source:NCBI gene;Acc:562710])

HSP 1 Score: 102.064 bits (253), Expect = 1.230e-23
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 1

Query:  997 VKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPR 1215
            VKRPMNAFMVWSR +R K+ +  P MHNS ISK LG +WK ++  +KRP+ +E  RL   HM+EHPDY+Y+PR
Sbjct:   59 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRALHMKEHPDYKYRPR 131

[Close]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Match: sox12 (SRY-box transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33])

HSP 1 Score: 100.908 bits (250), Expect = 2.467e-23
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1

Query:  964 RPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPK 1221
            +P   +    H+KRPMNAFMVWS+ ER KI+   PD+HN+ ISK LG++WK++   +K P+  E  RL  +HM ++PDY+Y+PR K
Sbjct:   49 QPDWCKTANGHIKRPMNAFMVWSQIERRKIMMESPDVHNAEISKRLGRRWKQLKDCEKVPFMREAERLRLKHMADYPDYKYRPRKK 134

[Close]

BLAST of soxP-5 vs. Ensembl Yeast
Match: ROX1 (Heme-dependent repressor of hypoxic genes; mediates aerobic transcriptional repression of hypoxia induced genes such as COX5b and CYC7; repressor function regulated through decreased promoter occupancy in response to oxidative stress; contains an HMG domain that is responsible for DNA bending activity; involved in the hyperosmotic stress resistance [Source:SGD;Acc:S000006269])

HSP 1 Score: 50.8322 bits (120), Expect = 3.194e-7
Identity = 27/78 (34.62%), Postives = 44/78 (56.41%), Query Frame = 1

Query:  997 VKRPMNAFMVWSREERSKIL------KACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKP 1212
            + RP NAF+++ R+   +IL      +     HNSNISK++G KWK +   DK  +     +   +H  ++P+Y+YKP
Sbjct:   10 IPRPKNAFILF-RQHYHRILIDEWTAQGVEIPHNSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKP 86

[Close]

BLAST of soxP-5 vs. Ensembl Yeast
Match: ABF2 (Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype in a yeast abf2 strain [Source:SGD;Acc:S000004676])

HSP 1 Score: 47.7506 bits (112), Expect = 7.077e-7
Identity = 39/158 (24.68%), Postives = 77/158 (48.73%), Query Frame = 1

Query:  922 QPLGLLNARIIRANRPGEIENRT--NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTC---IINGRKLRISEYK--------DLIKLRKSKMPDLDMSVDVENSWEDSKVI 1356
            +PL  L + +++A++  ++ N       KRP +A+ ++ ++ RS+ +K  P +  + ISK+ G+KW+ + A  K  Y  E+ +L  ++ +   ++  K  PK+     I    ++R   +         DL+K+   K   LD S+  +   E  K I
Sbjct:   16 KPLFNLASTLLKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAI 173

[Close]

BLAST of soxP-5 vs. Ensembl Yeast
Match: NHP6B (High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication [Source:SGD;Acc:S000002157])

HSP 1 Score: 43.5134 bits (101), Expect = 4.516e-6
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = 1

Query:  958 ANRPGEIENRT-------NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPY 1146
            A +P E + RT       N  KR ++A+M ++ E R  +    PD+    + ++LG++WK ++A +K+PY
Sbjct:    7 AKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQPY 76

[Close]

BLAST of soxP-5 vs. Ensembl Nematostella
Match: EDO32666 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUF3])

HSP 1 Score: 109.383 bits (272), Expect = 3.640e-27
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 1

Query:  988 TNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIIN 1239
              HVKRPMNAFMVWSREER KI +  P MHNS ISK LG +WK+++  DK+P+ EE  +L  QHM+EHPDY+Y+PR K   ++ 
Sbjct:    7 VEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRAQHMKEHPDYKYRPRRKPKSLLK 90

[Close]

BLAST of soxP-5 vs. Ensembl Nematostella
Match: EDO40934 (Predicted protein; Sox family protein B1 [Source:UniProtKB/TrEMBL;Acc:Q3S381])

HSP 1 Score: 107.071 bits (266), Expect = 1.735e-25
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 1

Query:  982 NRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCII 1236
            N  + VKRPMNAFMVWSRE R K+ +  P MHNS ISK LG +WK +S  +KRPY +E  RL   HM+EHPDY+Y+PR K   ++
Sbjct:   28 NSADRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQEKRPYIDEARRLRAVHMKEHPDYKYRPRRKSKTLL 112

[Close]

BLAST of soxP-5 vs. Ensembl Nematostella
Match: EDO38755 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC09])

HSP 1 Score: 93.5893 bits (231), Expect = 2.569e-23
Identity = 40/78 (51.28%), Postives = 58/78 (74.36%), Query Frame = 1

Query:  982 NRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPR 1215
            ++  HVKRPMN FMVWSRE+R +IL+  P ++N+ +SKLLG  WK++S  +K PY E+   L+  H E+HPDY+Y+P+
Sbjct:    3 SKKTHVKRPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKLSVEEKEPYIEKAKHLTEMHKEKHPDYKYQPK 80

[Close]

BLAST of soxP-5 vs. Ensembl Nematostella
Match: EDO42788 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0S2])

HSP 1 Score: 93.2041 bits (230), Expect = 4.971e-23
Identity = 38/79 (48.10%), Postives = 61/79 (77.22%), Query Frame = 1

Query:  997 VKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCI 1233
            VKRPMN+FMVW++  R K+ +  P +HN+ +SK+LGK W+ +SA +K+PY +E +RL ++H E+HPDY+Y+PR ++  +
Sbjct:   17 VKRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRMLSAAEKQPYVDEAARLDKRHKEDHPDYKYRPRRRQKSL 95

[Close]

BLAST of soxP-5 vs. Ensembl Nematostella
Match: EDO32843 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STW6])

HSP 1 Score: 92.8189 bits (229), Expect = 5.102e-23
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1

Query:  991 NHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDY 1200
             HVKRPMNAFMVWS+ ER K+ +  PDMHN+ ISK LGK+WK +S  +KRP+ EE  RL  +HM+ +PDY
Sbjct:   21 QHVKRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSESEKRPFVEESERLRIRHMQAYPDY 90

[Close]

BLAST of soxP-5 vs. Ensembl Medaka
Match: sox5 (SRY-box transcription factor 5 [Source:NCBI gene;Acc:100144355])

HSP 1 Score: 172.94 bits (437), Expect = 6.756e-46
Identity = 74/123 (60.16%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  940 NARIIRANRPGEIENRTN---HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            ++RI R +R      R+N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  517 DSRIFRESR-----GRSNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 634

[Close]

BLAST of soxP-5 vs. Ensembl Medaka
Match: sox5 (SRY-box transcription factor 5 [Source:NCBI gene;Acc:100144355])

HSP 1 Score: 172.17 bits (435), Expect = 2.763e-45
Identity = 74/123 (60.16%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  940 NARIIRANRPGEIENRTN---HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            ++RI R +R      R+N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  629 DSRIFRESR-----GRSNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 746

[Close]

BLAST of soxP-5 vs. Ensembl Medaka
Match: sox5 (SRY-box transcription factor 5 [Source:NCBI gene;Acc:100144355])

HSP 1 Score: 172.17 bits (435), Expect = 3.138e-45
Identity = 74/123 (60.16%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  940 NARIIRANRPGEIENRTN---HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            ++RI R +R      R+N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  658 DSRIFRESR-----GRSNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 775

[Close]

BLAST of soxP-5 vs. Ensembl Medaka
Match: sox5 (SRY-box transcription factor 5 [Source:NCBI gene;Acc:100144355])

HSP 1 Score: 171.4 bits (433), Expect = 3.937e-45
Identity = 74/123 (60.16%), Postives = 103/123 (83.74%), Query Frame = 1

Query:  940 NARIIRANRPGEIENRTN---HVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            ++RI R +R      R+N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK M+ L+K+PYYEEQ+RLS+QH+E++PDY+YKPRPKRTC+++G+KLRI EYK +++ R+ +M
Sbjct:  602 DSRIFRESR-----GRSNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEM 719

[Close]

BLAST of soxP-5 vs. Ensembl Medaka
Match: sox6b (SRY-box containing gene 6b [Source:NCBI gene;Acc:100304449])

HSP 1 Score: 170.244 bits (430), Expect = 4.801e-45
Identity = 76/123 (61.79%), Postives = 100/123 (81.30%), Query Frame = 1

Query:  931 GLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKM 1299
            G   AR+ R +R G   N   H+KRPMNAFMVW+++ER KIL+A PDMHNSNISK+LG +WK MS  DK+PYYEEQ+RLS+ H+E++P+Y+YKPRPKRTCII+G+KLRI EYK +++ R+ +M
Sbjct:  465 GSAEARVFRESR-GRNSNEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQDKQPYYEEQARLSKLHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEM 585

[Close]

BLAST of soxP-5 vs. Planmine SMEST
Match: SMESG000066725.1 (SMESG000066725.1)

HSP 1 Score: 930.628 bits (2404), Expect = 0.000e+0
Identity = 519/519 (100.00%), Postives = 519/519 (100.00%), Query Frame = 1

Query:   46 MSNELKKAFEMASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNXXXXXXXXXXXXQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMXXXXXXXXXXXXXXXXXXXMPRAGNSPITPSYNSSVSSDYADFNERKIXXXXXXXXXXXXXXXXXXXXXXXXXXEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 1602
            MSNELKKAFEMASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNSLSPLISSSFPFQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC
Sbjct:    1 MSNELKKAFEMASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNSLSPLISSSFPFQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 519

[Close]

BLAST of soxP-5 vs. Planmine SMEST
Match: SMESG000066725.1 (SMESG000066725.1)

HSP 1 Score: 909.442 bits (2349), Expect = 0.000e+0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 1

Query:   76 MASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNXXXXXXXXXXXXQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMXXXXXXXXXXXXXXXXXXXMPRAGNSPITPSYNSSVSSDYADFNERKIXXXXXXXXXXXXXXXXXXXXXXXXXXEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 1602
            MASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNSLSPLISSSFPFQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC
Sbjct:    1 MASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILNSIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEKSTKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNSLSPLISSSFPFQWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTAHSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYNSSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNARIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSDLPAKIDFPALSDNSFPIKC 509

[Close]

BLAST of soxP-5 vs. Planmine SMEST
Match: SMESG000050484.1 (SMESG000050484.1)

HSP 1 Score: 209.92 bits (533), Expect = 7.905e-59
Identity = 102/172 (59.30%), Postives = 129/172 (75.00%), Query Frame = 1

Query:  934 LLNARIIRANR-PGEIEN----RTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRISEYKDLIKLRKS-----KMPDLDMSVDVENSWEDSKVISTGKSETSSLSDAYTEFNQEI 1419
            +L ARI+R+ R P + +N     ++H+KRPMNAFMVW+REER KILKACPDMHNSNISKLLG+KWK M+A DK+PYYEEQSRLSRQHME+HP+YRY+PRPKRTCI++GR+LRISEYKDL++ RK      K P    S ++ N  +  K+++      S L    T F+QEI
Sbjct:  516 ILGARIVRSQRNPDKSDNMSRSSSSHIKRPMNAFMVWAREERRKILKACPDMHNSNISKLLGQKWKSMTAADKQPYYEEQSRLSRQHMEQHPEYRYRPRPKRTCIVDGRRLRISEYKDLMRARKGPDGNRKQPWFSGSDNMSNDAQTQKIVN------SILGCNMTSFSQEI 681

[Close]

BLAST of soxP-5 vs. Planmine SMEST
Match: SMESG000077970.1 (SMESG000077970.1)

HSP 1 Score: 105.916 bits (263), Expect = 1.164e-24
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 1

Query:  985 RTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRI 1257
            + +HVKRPMNAFMVWSR +R K+ +  P MHNS ISK LG +WK ++ L KRP+ +E  RL   HM++HPDY+Y+PR K   I    K  I
Sbjct:   65 KEDHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKHLTELQKRPFIDEAKRLRAIHMKDHPDYKYRPRRKPKSIFRKDKYTI 155

[Close]

BLAST of soxP-5 vs. Planmine SMEST
Match: SMESG000052511.1 (SMESG000052511.1)

HSP 1 Score: 102.834 bits (255), Expect = 1.270e-23
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1

Query:  985 RTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISKLLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGRKLRI 1257
            +  HVKRPMNAFMVWSR +R K+ +  P MHNS ISK LG +WK ++   KRP+ +E  RL   HM+EHPDY+Y+PR K   +    K++I
Sbjct:   76 KVTHVKRPMNAFMVWSRGQRKKMAQINPKMHNSEISKRLGSEWKLLTDSQKRPFIDEAKRLRAIHMKEHPDYKYRPRRKPKQLYKKEKIQI 166

The following BLAST results are available for this feature:

BLAST of soxP-5 vs. Ensembl Human
BLAST of soxP-5 vs. Ensembl Celegans
BLAST of soxP-5 vs. Ensembl Fly
BLAST of soxP-5 vs. Ensembl Zebrafish
BLAST of soxP-5 vs. Ensembl Xenopus
BLAST of soxP-5 vs. Ensembl Mouse
BLAST of soxP-5 vs. UniProt/SwissProt
BLAST of soxP-5 vs. TrEMBL
BLAST of soxP-5 vs. Ensembl Cavefish
BLAST of soxP-5 vs. Ensembl Sea Lamprey
BLAST of soxP-5 vs. Ensembl Yeast
BLAST of soxP-5 vs. Ensembl Nematostella
BLAST of soxP-5 vs. Ensembl Medaka
BLAST of soxP-5 vs. Planmine SMEST

BLAST of soxP-5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
SOX5	1.623e-47	60.98	SRY-box transcription factor 5 [Source:HGNC Symbol...	[more]
SOX5	5.074e-46	60.98	SRY-box transcription factor 5 [Source:HGNC Symbol...	[more]
SOX5	5.074e-46	60.98	SRY-box transcription factor 5 [Source:HGNC Symbol...	[more]
SOX5	1.069e-45	60.98	SRY-box transcription factor 5 [Source:HGNC Symbol...	[more]
SOX5	1.078e-45	60.98	SRY-box transcription factor 5 [Source:HGNC Symbol...	[more]

BLAST of soxP-5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
egl-13	4.712e-49	70.87	Transcription factor egl-13 [Source:UniProtKB/Swi...	[more]
egl-13	4.712e-49	70.87	Transcription factor egl-13 [Source:UniProtKB/Swi...	[more]
egl-13	4.712e-49	70.87	Transcription factor egl-13 [Source:UniProtKB/Swi...	[more]
egl-13	5.260e-49	70.87	Transcription factor egl-13 [Source:UniProtKB/Swi...	[more]
egl-13	6.507e-49	70.87	Transcription factor egl-13 [Source:UniProtKB/Swi...	[more]

BLAST of soxP-5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Sox102F	2.843e-49	72.38	gene:FBgn0039938 transcript:FBtr0089252	[more]
Sox102F	2.843e-49	72.38	gene:FBgn0039938 transcript:FBtr0334488	[more]
Sox102F	2.843e-49	72.38	gene:FBgn0039938 transcript:FBtr0334489	[more]
Sox102F	5.801e-49	72.38	gene:FBgn0039938 transcript:FBtr0100600	[more]
D	1.093e-23	54.55	gene:FBgn0000411 transcript:FBtr0333036	[more]

BLAST of soxP-5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sox5	1.155e-44	66.67	SRY-box transcription factor 5 [Source:ZFIN;Acc:ZD...	[more]
sox5	1.193e-44	66.67	SRY-box transcription factor 5 [Source:ZFIN;Acc:ZD...	[more]
sox13	1.315e-43	64.22	SRY-box transcription factor 13 [Source:ZFIN;Acc:Z...	[more]
sox13	1.315e-43	64.22	SRY-box transcription factor 13 [Source:ZFIN;Acc:Z...	[more]
sox13	1.461e-43	65.42	SRY-box transcription factor 13 [Source:ZFIN;Acc:Z...	[more]

BLAST of soxP-5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sox5	8.066e-45	60.66	SRY-box 5 [Source:NCBI gene;Acc:100038209]	[more]
sox5	8.603e-45	60.66	SRY-box 5 [Source:NCBI gene;Acc:100038209]	[more]
wasf1	1.572e-44	66.99	WASP family member 1 [Source:Xenbase;Acc:XB-GENE-9...	[more]
wasf1	2.384e-44	66.99	WASP family member 1 [Source:Xenbase;Acc:XB-GENE-9...	[more]
wasf1	3.168e-44	66.99	WASP family member 1 [Source:Xenbase;Acc:XB-GENE-9...	[more]

BLAST of soxP-5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Sox5	1.149e-47	60.98	SRY (sex determining region Y)-box 5 [Source:MGI S...	[more]
Sox5	7.698e-46	60.98	SRY (sex determining region Y)-box 5 [Source:MGI S...	[more]
Sox5	9.883e-46	60.98	SRY (sex determining region Y)-box 5 [Source:MGI S...	[more]
Sox5	9.969e-46	60.98	SRY (sex determining region Y)-box 5 [Source:MGI S...	[more]
Sox5	1.013e-45	60.98	SRY (sex determining region Y)-box 5 [Source:MGI S...	[more]

BLAST of soxP-5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q23045\|EGL13_CAEEL	1.017e-46	70.87	Transcription factor egl-13 OS=Caenorhabditis eleg...	[more]
sp\|P35711\|SOX5_HUMAN	6.440e-45	60.98	Transcription factor SOX-5 OS=Homo sapiens OX=9606...	[more]
sp\|P35710\|SOX5_MOUSE	6.954e-45	60.98	Transcription factor SOX-5 OS=Mus musculus OX=1009...	[more]
sp\|B3DM43\|SOX5_XENTR	4.018e-44	60.66	Transcription factor Sox-5 OS=Xenopus tropicalis O...	[more]
sp\|P40647\|SOX5_XENLA	4.955e-44	61.67	Transcription factor Sox-5 OS=Xenopus laevis OX=83...	[more]

BLAST of soxP-5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
I1ZIB4	0.000e+0	100.00	SoxP-5 (Fragment) OS=Schmidtea mediterranea OX=793...	[more]
A0A1V9X4F2	9.413e-53	68.85	HMG box domain-containing protein (Fragment) OS=Tr...	[more]
A0A1I8H6R3	6.618e-52	80.00	HMG box domain-containing protein OS=Macrostomum l...	[more]
A0A3P7LXS8	1.625e-51	75.93	HMG box domain-containing protein (Fragment) OS=Di...	[more]
A0A183TDV2	1.655e-51	78.85	HMG box domain-containing protein OS=Schistocephal...	[more]

BLAST of soxP-5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sox5	6.251e-45	66.67	SRY-box transcription factor 5 [Source:ZFIN;Acc:ZD...	[more]
sox5	6.817e-45	66.67	SRY-box transcription factor 5 [Source:ZFIN;Acc:ZD...	[more]
sox13	1.462e-43	66.34	SRY-box transcription factor 13 [Source:NCBI gene;...	[more]
sox13	1.476e-43	66.34	SRY-box transcription factor 13 [Source:NCBI gene;...	[more]
sox13	1.586e-43	66.34	SRY-box transcription factor 13 [Source:NCBI gene;...	[more]

BLAST of soxP-5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000008165.1	5.379e-46	63.11	pep scaffold:Pmarinus_7.0:GL479973:18969:29522:-1 ...	[more]
ENSPMAT00000006684.1	2.240e-41	56.20	pep scaffold:Pmarinus_7.0:GL477399:28105:35473:-1 ...	[more]
sox4b	2.614e-25	51.14	SRY-box transcription factor 4b [Source:ZFIN;Acc:Z...	[more]
sox1b	1.230e-23	58.90	SRY-box transcription factor 1b [Source:NCBI gene;...	[more]
sox12	2.467e-23	48.84	SRY-box transcription factor 12 [Source:ZFIN;Acc:Z...	[more]

BLAST of soxP-5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3


Match Name	E-value	Identity	Description
ROX1	3.194e-7	34.62	Heme-dependent repressor of hypoxic genes; mediate...	[more]
ABF2	7.077e-7	24.68	Mitochondrial DNA-binding protein; involved in mit...	[more]
NHP6B	4.516e-6	31.43	High-mobility group (HMG) protein; binds to and re...	[more]

BLAST of soxP-5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO32666	3.640e-27	58.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO40934	1.735e-25	56.47	Predicted protein; Sox family protein B1 [Source:...	[more]
EDO38755	2.569e-23	51.28	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO42788	4.971e-23	48.10	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32843	5.102e-23	60.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of soxP-5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
sox5	6.756e-46	60.16	SRY-box transcription factor 5 [Source:NCBI gene;A...	[more]
sox5	2.763e-45	60.16	SRY-box transcription factor 5 [Source:NCBI gene;A...	[more]
sox5	3.138e-45	60.16	SRY-box transcription factor 5 [Source:NCBI gene;A...	[more]
sox5	3.937e-45	60.16	SRY-box transcription factor 5 [Source:NCBI gene;A...	[more]
sox6b	4.801e-45	61.79	SRY-box containing gene 6b [Source:NCBI gene;Acc:1...	[more]

BLAST of soxP-5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000066725.1	0.000e+0	100.00	SMESG000066725.1	[more]
SMESG000066725.1	0.000e+0	100.00	SMESG000066725.1	[more]
SMESG000050484.1	7.905e-59	59.30	SMESG000050484.1	[more]
SMESG000077970.1	1.164e-24	52.75	SMESG000077970.1	[more]
SMESG000052511.1	1.270e-23	51.65	SMESG000052511.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Cross References

External references for this transcript


Database	Accession
SmedGD GBrowse	SMED30020283
GenBank	AFJ24768.1

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30020283 ID=SMED30020283|Name=soxP-5|organism=Schmidtea mediterranea sexual|type=transcript|length=1695bp
ATTAAATTAAATCAATAATAATATTATATTTGCCGATTAAAATGAATGTC
AAATGAATTGAAAAAGGCTTTTGAAATGGCTTCAAGAAGAAAATCTCATT
TACCAAATCGAATTGACATTCAAGTCGATAACGATGAAAATATTATTGAT
GTCGGAGATTCGAGAATTTCCAGTCCGTTGGAAAGGATATTGAATTCTAT
CAAAAATGTTATTGAGGAATTGAATGGTTATGAGGAGAAACTTCGTTTTA
TTTCCGATATACACCACGAACTGGATGGAATTAAAAATCAATATTCTCAT
TACGAGGAATTACCGTTGAATTTAATCACACAAAAAGATGAAAAATCTAC
AAAATCTAATAATAATAATATCCAACCGCTAGCTACAGAACTCAACAGAA
ATCACGAGGTGCAAACGAAGGCTCACGAAAACCCAATGTACCGAAGCCAC
GTTCTAAACAGCCTTTCTCCATTAATCTCATCGAGTTTTCCTTTCCAGTG
GAACTCACAGTCAACTCAAACAATCGCGAATGCGCTCCTAGCACCGCAAC
CACAGAACATGATATCGAATATCAATAATCCAGATTACCGGTCAGGCCTC
CTGATAAATCCCCTCCCGACTGGCAACCCATTCATCAACACAGCCCACTC
AATCACCGCCGGGTTTCCATCGATTATCCCAACGACCAATCAAATGTCAG
TGCTCAGCCACAATATCCTCAACAACCTCATATCATCCATGAACAACTCG
ATCATGCCTCGAGCTGGCAATTCACCGATCACTCCCAGCTACAACTCATC
GGTTTCGTCGGATTATGCGGATTTCAATGAGCGGAAGATCAATTCCAGCG
AGCTCAACAATGTCCATAGCAACAACAACAACAGCAACAATTGCCATAGC
AACACCAATAATAAATCCGAGCAGCCACTAGGATTACTGAACGCTCGCAT
CATTCGCGCTAACCGCCCGGGAGAAATAGAAAATCGAACGAATCACGTCA
AGCGACCAATGAACGCATTTATGGTTTGGTCACGTGAAGAACGCAGCAAA
ATATTGAAAGCCTGTCCCGACATGCACAACAGCAACATCTCGAAATTACT
GGGAAAGAAATGGAAAGAAATGTCAGCGCTAGACAAGCGGCCATATTATG
AGGAACAGTCGCGATTGAGCAGGCAGCACATGGAGGAACATCCGGACTAT
CGATACAAGCCCCGGCCAAAGAGGACATGCATAATTAACGGGCGGAAATT
ACGGATTTCAGAATATAAAGATCTGATTAAGTTGAGAAAATCGAAAATGC
CGGATTTGGACATGTCGGTTGATGTGGAGAACAGTTGGGAAGATTCAAAA
GTCATATCTACAGGAAAGAGTGAAACAAGTTCTCTCAGTGATGCCTACAC
AGAATTCAATCAAGAAATCCCAATTATTGAAAACCAGGGCGCCTACTCCT
CACCGTTGTCTACCACCAATCACTTTCCAGAATCATTCAACACAGAAAAT
AAAACTAACACAATCAATTACGATCATTCTGCACAGAAATCTGATTTACC
CGCAAAAATTGATTTTCCTGCCTTGTCAGACAATTCATTCCCAATAAAGT
GCTAATTTTGTAGTTGACAACAAACGTAAATGTGTACAGATTTTATATTC
ATTTTCTGCTCTGTCAAATTCGATGATGATGATGATATGGCTTTT

protein sequence of SMED30020283-orf-1

>SMED30020283-orf-1 ID=SMED30020283-orf-1|Name=SMED30020283-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=520bp
MSNELKKAFEMASRRKSHLPNRIDIQVDNDENIIDVGDSRISSPLERILN
SIKNVIEELNGYEEKLRFISDIHHELDGIKNQYSHYEELPLNLITQKDEK
STKSNNNNIQPLATELNRNHEVQTKAHENPMYRSHVLNSLSPLISSSFPF
QWNSQSTQTIANALLAPQPQNMISNINNPDYRSGLLINPLPTGNPFINTA
HSITAGFPSIIPTTNQMSVLSHNILNNLISSMNNSIMPRAGNSPITPSYN
SSVSSDYADFNERKINSSELNNVHSNNNNSNNCHSNTNNKSEQPLGLLNA
RIIRANRPGEIENRTNHVKRPMNAFMVWSREERSKILKACPDMHNSNISK
LLGKKWKEMSALDKRPYYEEQSRLSRQHMEEHPDYRYKPRPKRTCIINGR
KLRISEYKDLIKLRKSKMPDLDMSVDVENSWEDSKVISTGKSETSSLSDA
YTEFNQEIPIIENQGAYSSPLSTTNHFPESFNTENKTNTINYDHSAQKSD
LPAKIDFPALSDNSFPIKC*

Aliases

The feature 'soxP-5' has the following synonyms


Synonym
SoxP-5

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000101	muscle cell
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036910	HMG_box_dom_sf
IPR009071	HMG_box_dom

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..65
None	No IPR available	PANTHER	PTHR45789:SF2	FI18025P1	coord: 93..484
None	No IPR available	PANTHER	PTHR45789	FAMILY NOT NAMED	coord: 93..484
None	No IPR available	CDD	cd01388	SOX-TCF_HMG-box	coord: 317..388 e-value: 1.02457E-36 score: 128.185
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 317..387 e-value: 1.8E-26 score: 103.9
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 318..386 e-value: 9.9E-24 score: 83.6
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 318..386 score: 20.866
IPR036910	High mobility group box domain superfamily	GENE3D	G3DSA:1.10.30.10		coord: 315..396 e-value: 9.9E-28 score: 98.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	SSF47095	HMG-box	coord: 312..390