Basement membrane-specific heparan sulfate proteoglycan core protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020058 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 22Note: Hover over icons to view figure legend
Homology
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Match: HSPG2 (heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]) HSP 1 Score: 123.635 bits (309), Expect = 1.317e-27 Identity = 80/214 (37.38%), Postives = 105/214 (49.07%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDE-DQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE--CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVI-ESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C CRNG CI CDG+ DC DGSDE D C+P C NG + W CDG+ DC + DEA C E CG +++C IP +F CD+++DC + DE C+ P ++ +S I A RG+TVT TC G P P I WR NWG + + R+ V E R TL I + + D G Y CEA++
Sbjct: 285 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG--NGHCALK-----LWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRES--IQASRGQTVTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTSEGGRG------TLIIRDVKESDQGAYTCEAMN 483
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 87.4261 bits (215), Expect = 9.748e-17 Identity = 66/217 (30.41%), Postives = 94/217 (43.32%), Query Frame = 2
Query: 1841 IIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCET--YNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
I +P +I G+ F+C + R P + + T K + Y T N S AE+ V C C++G+CI+ CDG +C DGSDE QE C LS C++ ++ +N W CDG+ DC NG DE C C +++C+DG K I R F+CD D DC++G DE+ C
Sbjct: 28 IHESPSVILGPPGEVPGFRCALWRHLR----PHLVLGGALAPPAPIKFTEGPPATLKASVPYEVETLPQNLPA----PPWSAAEIFSHVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC-----LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKT--CSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC 228 HSP 2 Score: 64.6994 bits (156), Expect = 7.928e-10 Identity = 55/170 (32.35%), Postives = 75/170 (44.12%), Query Frame = 2
Query: 2066 CRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR-----QCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTL 2560
C G A VL C S C + CI CD PDC DGSDE + CR Q D S C + + W CDG DC + DE C V C ++QC+DG I + CD++ DC + DE C+ + + E + +K ++ GE +TL
Sbjct: 219 CLDGSDEASCPVLT---CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGD--SSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC--AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS--GECITL 377 HSP 3 Score: 58.5362 bits (140), Expect = 6.822e-8 Identity = 41/131 (31.30%), Postives = 58/131 (44.27%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCFGNVL------ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS C +G+CI+ CD DC DGSDE C P S +C + + + WACD + DC +G DE +C G + C ++ C G + I ++ CD DC + DE C
Sbjct: 194 CSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQL-------WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENC 316 HSP 4 Score: 56.6102 bits (135), Expect = 2.504e-7 Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS+ C +GECI+S+ CDG PDC D SDE+ C P +C N + CD E DC + DE C L G K++C+ G + I +C+ DC + DE
Sbjct: 282 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCI-------HGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDE 393
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 83.1889 bits (204), Expect = 1.775e-15 Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCET--YNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPII 2500
C++G+CI+ CDG +C DGSDE QE C LS C++ ++ +N W CDG+ DC NG DE C C +++C+DG K I R F+CD D DC++G DE+ C P++
Sbjct: 34 CQDGKCISYKWVCDGSAECQDGSDESQETC-----LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKT--CSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC--PVL 146 HSP 2 Score: 65.0846 bits (157), Expect = 6.417e-10 Identity = 55/170 (32.35%), Postives = 75/170 (44.12%), Query Frame = 2
Query: 2066 CRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR-----QCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTL 2560
C G A VL C S C + CI CD PDC DGSDE + CR Q D S C + + W CDG DC + DE C V C ++QC+DG I + CD++ DC + DE C+ + + E + +K ++ GE +TL
Sbjct: 134 CLDGSDEASCPVLT---CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGD--SSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC--AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS--GECITL 292 HSP 3 Score: 58.5362 bits (140), Expect = 7.562e-8 Identity = 41/132 (31.06%), Postives = 58/132 (43.94%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCFGNVL------ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS C +G+CI+ CD DC DGSDE C P S +C + + + WACD + DC +G DE +C G + C ++ C G + I ++ CD DC + DE C
Sbjct: 108 TCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQL-------WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENC 231 HSP 4 Score: 56.6102 bits (135), Expect = 2.637e-7 Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS+ C +GECI+S+ CDG PDC D SDE+ C P +C N + CD E DC + DE C L G K++C+ G + I +C+ DC + DE
Sbjct: 197 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCI-------HGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDE 308
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 82.4185 bits (202), Expect = 2.670e-15 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCET--YNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPII 2500
C C++G+CI+ CDG +C DGSDE QE C LS C++ ++ +N W CDG+ DC NG DE C C +++C+DG K I R F+CD D DC++G DE+ C P++
Sbjct: 27 CERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC-----LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKT--CSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC--PVL 146 HSP 2 Score: 63.929 bits (154), Expect = 1.372e-9 Identity = 55/170 (32.35%), Postives = 75/170 (44.12%), Query Frame = 2
Query: 2066 CRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR-----QCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTL 2560
C G A VL C S C + CI CD PDC DGSDE + CR Q D S C + + W CDG DC + DE C V C ++QC+DG I + CD++ DC + DE C+ + + E + +K ++ GE +TL
Sbjct: 134 CLDGSDEASCPVLT---CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGD--SSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC--AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS--GECITL 292 HSP 3 Score: 57.7658 bits (138), Expect = 1.188e-7 Identity = 41/131 (31.30%), Postives = 58/131 (44.27%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCF------GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS C +G+CI+ CD DC DGSDE C P S +C + + + WACD + DC +G DE +C G+ C ++ C G + I ++ CD DC + DE C
Sbjct: 109 CSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQL-------WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENC 231 HSP 4 Score: 55.8398 bits (133), Expect = 4.183e-7 Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS+ C +GECI+S+ CDG PDC D SDE+ C P +C N + CD E DC + DE C L G K++C+ G + I +C+ DC + DE
Sbjct: 197 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCI-------HGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDE 308
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Match: LDLR (low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]) HSP 1 Score: 82.4185 bits (202), Expect = 2.735e-15 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCET--YNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPII 2500
C C++G+CI+ CDG +C DGSDE QE C LS C++ ++ +N W CDG+ DC NG DE C C +++C+DG K I R F+CD D DC++G DE+ C P++
Sbjct: 27 CERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC-----LSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKT--CSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASC--PVL 146 HSP 2 Score: 63.929 bits (154), Expect = 1.259e-9 Identity = 55/170 (32.35%), Postives = 75/170 (44.12%), Query Frame = 2
Query: 2066 CRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR-----QCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTL 2560
C G A VL C S C + CI CD PDC DGSDE + CR Q D S C + + W CDG DC + DE C V C ++QC+DG I + CD++ DC + DE C+ + + E + +K ++ GE +TL
Sbjct: 134 CLDGSDEASCPVLT---CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGD--SSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC--AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS--GECITL 292 HSP 3 Score: 57.7658 bits (138), Expect = 1.228e-7 Identity = 41/131 (31.30%), Postives = 58/131 (44.27%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCF------GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS C +G+CI+ CD DC DGSDE C P S +C + + + WACD + DC +G DE +C G+ C ++ C G + I ++ CD DC + DE C
Sbjct: 109 CSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQL-------WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEENC 231 HSP 4 Score: 55.8398 bits (133), Expect = 4.180e-7 Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS+ C +GECI+S+ CDG PDC D SDE+ C P +C N + CD E DC + DE C L G K++C+ G + I +C+ DC + DE
Sbjct: 197 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCI-------HGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDE 308
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Match: unc-52 (Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]) HSP 1 Score: 120.168 bits (300), Expect = 4.627e-27 Identity = 101/321 (31.46%), Postives = 147/321 (45.79%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + TLTI + QP D G Y CEA++
Sbjct: 45 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCLQTSE-----GGYGTLTIHDAQPVDQGAYTCEAIN 348
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Match: unc-52 (Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]) HSP 1 Score: 120.168 bits (300), Expect = 4.643e-27 Identity = 101/321 (31.46%), Postives = 148/321 (46.11%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + + TLTI + QP D G Y CEA++
Sbjct: 834 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCL-----QTSEGGYGTLTIHDAQPVDQGAYTCEAIN 1137 HSP 2 Score: 62.7734 bits (151), Expect = 1.832e-9 Identity = 49/140 (35.00%), Postives = 64/140 (45.71%), Query Frame = 2
Query: 1967 ADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKG---RSTAEVLVLVDPV------CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC 2359
A+ R TV K + K L T D+GT +G + EV + D V C SG R C++G C+ A+FCD + C DG DE+ QC RCE+ N P + CDG DC +G DE KC
Sbjct: 217 AEDGRVTVYK-KGDKHHLHIINATDADDGTYKMIVQGINVEADFEVRITSDRVATESDECPSGERACKSGHCLPVAQFCDRRVQCPDGDDEEHCSEVQCKSNEFRCESTNVCVPTVVV------CDGWKDCHDGSDEKKC 349
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Match: unc-52 (Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]) HSP 1 Score: 120.168 bits (300), Expect = 4.956e-27 Identity = 101/321 (31.46%), Postives = 148/321 (46.11%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + + TLTI + QP D G Y CEA++
Sbjct: 45 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCL-----QTSEGGYGTLTIHDAQPVDQGAYTCEAIN 348
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Match: unc-52 (Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]) HSP 1 Score: 120.168 bits (300), Expect = 5.105e-27 Identity = 101/321 (31.46%), Postives = 148/321 (46.11%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + + TLTI + QP D G Y CEA++
Sbjct: 45 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCL-----QTSEGGYGTLTIHDAQPVDQGAYTCEAIN 348
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Match: unc-52 (Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]) HSP 1 Score: 119.783 bits (299), Expect = 5.413e-27 Identity = 101/321 (31.46%), Postives = 148/321 (46.11%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + + TLTI + QP D G Y CEA++
Sbjct: 45 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCL-----QTSEGGYGTLTIHDAQPVDQGAYTCEAIN 348
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Match: trol (gene:FBgn0284408 transcript:FBtr0342821) HSP 1 Score: 123.25 bits (308), Expect = 6.431e-28 Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C+ C NGECI+ + CDG PDC+D SDE Q L +C+ + + W CDGE+DCG+ DE C + C ++QC G IP++F CD DC +G DE C+ P+ I+ S ++ E + LTC TG P P I+WR NWG + ++ +SY G TL + +P D G Y+CE ++
Sbjct: 898 ACTEYQATCMNGECIDKSSICDGNPDCSDASDE------QSCSLGLKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSG-HCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQS--VSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDK---CESKSYGGTG----TLRCPDMRPQDSGAYSCEIIN 1094 HSP 2 Score: 59.6918 bits (143), Expect = 1.817e-8 Identity = 133/630 (21.11%), Postives = 246/630 (39.05%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWID-----PRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWI-------TPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVF----GETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCR-INTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNP---KNVRFFEP-------------LELNCEVTPPLRDVTYEIYFNDRLISQS----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRV---RGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRV-EGYQTRNRD-VIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRII-VTPP 1858
++ + E+ I + G + C ++ S P+ +W P N NV LTI +E+ G Y+C A LS+T S+ ++ +++ + IV +TF+ G G + EW+ +P + QS + + E +G Y CR I + G A + V+ P +++ + N G+ + C V + +V + + SN IL++ + G YTC N + +V+ +V E R + GG + + NP +N +P + L C++ PL + +E L + +R I R+++ N+G Y+C GRD N + +V + +I P + V AG ++HC++ ++ ++ W S D R + R+ S++ +I Q G+Y C G + + + K + P Q ++ +G ++ C V + Y R +D V +++ + + N +A ++ ++LT +DAG YIC + D R + V DL+++ TPP
Sbjct: 2500 IIESLEQNILIIQGEDYSITC--EASGSPYPSI-KWAKVHDFMPENVHISGNV-LTIYGARFENRGVYSCVAENDHGSDLSST--SIDIEPRERPSVK------IVSAPLQTFSVGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGE--ATGVATITVQE-PTLVQIIPDNRDLRLTEGDELSLTC-VGSGVPNPEVEWVNEMALKRDLYSPPSNTAILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERR----GDIGGVDDDSDRDPINYNPPQQQNPGIHQPGSNQLLATDIGDNVTLTCDMFQPL-NTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNV------KTYFVKELVLMPLPRIRFY--PNIPLTVEAGQNLDVHCQV---ENVRPEDVHW--------STDNNRPLPSSV-RIVGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPN----------NARTDSQILVLTNLRPEDAGRYICN---SYDVDRGQQLPEVSIDLQVLTATPP 3074
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Match: trol (gene:FBgn0284408 transcript:FBtr0342809) HSP 1 Score: 123.25 bits (308), Expect = 6.633e-28 Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C+ C NGECI+ + CDG PDC+D SDE Q L +C+ + + W CDGE+DCG+ DE C + C ++QC G IP++F CD DC +G DE C+ P+ I+ S ++ E + LTC TG P P I+WR NWG + ++ +SY G TL + +P D G Y+CE ++
Sbjct: 745 ACTEYQATCMNGECIDKSSICDGNPDCSDASDE------QSCSLGLKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSG-HCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQS--VSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDK---CESKSYGGTG----TLRCPDMRPQDSGAYSCEIIN 941 HSP 2 Score: 60.8474 bits (146), Expect = 8.565e-9 Identity = 64/234 (27.35%), Postives = 99/234 (42.31%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI--------QPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNF 2794
C + C NG+CI++ K C+ DC++G DE++E CR C RC + V+ P C+G +C + DE C G EC +++CN G + + + C+ TDC + DE C + ++ DS I R V C+ G K+ W G R + + RN L I + D G Y CEA+ G ++ Q+ +N
Sbjct: 492 CQANEFRCNNGDCIDARKRCNNVSDCSEGEDENEE-CR-CYANQFRCNNGDCVSGSAP-------CNGYSECSDHSDELNC-GGTQECLPNQFRCNSG-QCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESR--EVIFRCRDEGPARAKVKWSRPGG-----RPLPPGFTDRN-----GRLEIPNIRVEDAGTYVCEAV--GYASYIPGQQVTVNL 700 HSP 3 Score: 60.8474 bits (146), Expect = 9.086e-9 Identity = 156/753 (20.72%), Postives = 277/753 (36.79%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWID-----PRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWI-------TPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVF----GETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCR-INTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNP---KNVRFFEP-------------LELNCEVTPPLRDVTYEIYFNDRLISQS----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRV---RGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRV-EGYQTRNRD-VIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTV--------EKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDE 2212
++ + E+ I + G + C ++ S P+ +W P N NV LTI +E+ G Y+C A LS+T S+ ++ +++ + IV +TF+ G G + EW+ +P + QS + + E +G Y CR I + G A + V+ P +++ + N G+ + C V + +V + + SN IL++ + G YTC N + +V+ +V E R + GG + + NP +N +P + L C++ PL + +E L + +R I R+++ N+G Y+C GRD N + +V + +I P + V AG ++HC++ ++ ++ W S D R + R+ S++ +I Q G+Y C G + + + K + P Q ++ +G ++ C V + Y R +D V +++ + + N +A ++ ++LT +DAG YIC + D R + E + + V R+P YP G DT + KL + K ++ A TT + C+ D C S C+ + CDG DC D SDE
Sbjct: 2285 IIESLEQNILIIQGEDYSITC--EASGSPYPSI-KWAKVHDFMPENVHISGNV-LTIYGARFENRGVYSCVAENDHGSDLSST--SIDIEPRERPSVK------IVSAPLQTFSVGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGE--ATGVATITVQE-PTLVQIIPDNRDLRLTEGDELSLTC-VGSGVPNPEVEWVNEMALKRDLYSPPSNTAILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERR----GDIGGVDDDSDRDPINYNPPQQQNPGIHQPGSNQLLATDIGDNVTLTCDMFQPL-NTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNV------KTYFVKELVLMPLPRIRFY--PNIPLTVEAGQNLDVHCQV---ENVRPEDVHW--------STDNNRPLPSSV-RIVGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPN----------NARTDSQILVLTNLRPEDAGRYICN---SYDVDRGQQLPEVSIDLQVL----------------------RAPQYPYNRFKGGVSLKDTPCMVLYICADFKSSKLSSAKPIISGPA-TTRAPAISYVCQPN----------DFKCVSHPHT-----CVRANMVCDGIYDCTDHSDE 2944
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Match: trol (gene:FBgn0284408 transcript:FBtr0342825) HSP 1 Score: 123.25 bits (308), Expect = 7.005e-28 Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C+ C NGECI+ + CDG PDC+D SDE Q L +C+ + + W CDGE+DCG+ DE C + C ++QC G IP++F CD DC +G DE C+ P+ I+ S ++ E + LTC TG P P I+WR NWG + ++ +SY G TL + +P D G Y+CE ++
Sbjct: 976 ACTEYQATCMNGECIDKSSICDGNPDCSDASDE------QSCSLGLKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSG-HCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQS--VSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDK---CESKSYGGTG----TLRCPDMRPQDSGAYSCEIIN 1172 HSP 2 Score: 59.6918 bits (143), Expect = 1.727e-8 Identity = 133/630 (21.11%), Postives = 246/630 (39.05%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWID-----PRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWI-------TPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVF----GETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCR-INTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNP---KNVRFFEP-------------LELNCEVTPPLRDVTYEIYFNDRLISQS----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRV---RGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRV-EGYQTRNRD-VIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRII-VTPP 1858
++ + E+ I + G + C ++ S P+ +W P N NV LTI +E+ G Y+C A LS+T S+ ++ +++ + IV +TF+ G G + EW+ +P + QS + + E +G Y CR I + G A + V+ P +++ + N G+ + C V + +V + + SN IL++ + G YTC N + +V+ +V E R + GG + + NP +N +P + L C++ PL + +E L + +R I R+++ N+G Y+C GRD N + +V + +I P + V AG ++HC++ ++ ++ W S D R + R+ S++ +I Q G+Y C G + + + K + P Q ++ +G ++ C V + Y R +D V +++ + + N +A ++ ++LT +DAG YIC + D R + V DL+++ TPP
Sbjct: 2516 IIESLEQNILIIQGEDYSITC--EASGSPYPSI-KWAKVHDFMPENVHISGNV-LTIYGARFENRGVYSCVAENDHGSDLSST--SIDIEPRERPSVK------IVSAPLQTFSVGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGE--ATGVATITVQE-PTLVQIIPDNRDLRLTEGDELSLTC-VGSGVPNPEVEWVNEMALKRDLYSPPSNTAILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERR----GDIGGVDDDSDRDPINYNPPQQQNPGIHQPGSNQLLATDIGDNVTLTCDMFQPL-NTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNV------KTYFVKELVLMPLPRIRFY--PNIPLTVEAGQNLDVHCQV---ENVRPEDVHW--------STDNNRPLPSSV-RIVGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPN----------NARTDSQILVLTNLRPEDAGRYICN---SYDVDRGQQLPEVSIDLQVLTATPP 3090
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Match: trol (gene:FBgn0284408 transcript:FBtr0342823) HSP 1 Score: 123.25 bits (308), Expect = 7.158e-28 Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C+ C NGECI+ + CDG PDC+D SDE Q L +C+ + + W CDGE+DCG+ DE C + C ++QC G IP++F CD DC +G DE C+ P+ I+ S ++ E + LTC TG P P I+WR NWG + ++ +SY G TL + +P D G Y+CE ++
Sbjct: 742 ACTEYQATCMNGECIDKSSICDGNPDCSDASDE------QSCSLGLKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSG-HCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQS--VSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDK---CESKSYGGTG----TLRCPDMRPQDSGAYSCEIIN 938 HSP 2 Score: 60.4622 bits (145), Expect = 9.247e-9 Identity = 64/234 (27.35%), Postives = 99/234 (42.31%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI--------QPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNF 2794
C + C NG+CI++ K C+ DC++G DE++E CR C RC + V+ P C+G +C + DE C G EC +++CN G + + + C+ TDC + DE C + ++ DS I R V C+ G K+ W G R + + RN L I + D G Y CEA+ G ++ Q+ +N
Sbjct: 519 CQANEFRCNNGDCIDARKRCNNVSDCSEGEDENEE-CR-CYANQFRCNNGDCVSGSAP-------CNGYSECSDHSDELNC-GGTQECLPNQFRCNSG-QCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESR--EVIFRCRDEGPARAKVKWSRPGG-----RPLPPGFTDRN-----GRLEIPNIRVEDAGTYVCEAV--GYASYIPGQQVTVNL 727 HSP 3 Score: 57.7658 bits (138), Expect = 6.835e-8 Identity = 125/601 (20.80%), Postives = 233/601 (38.77%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWID-----PRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWI-------TPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVF----GETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCR-INTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNP---KNVRFFEP-------------LELNCEVTPPLRDVTYEIYFNDRLISQS----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRV---RGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRV-EGYQTRNRD-VIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYIC 1780
++ + E+ I + G + C ++ S P+ +W P N NV LTI +E+ G Y+C A LS+T S+ ++ +++ + IV +TF+ G G + EW+ +P + QS + + E +G Y CR I + G A + V+ P +++ + N G+ + C V + +V + + SN IL++ + G YTC N + +V+ +V E R + GG + + NP +N +P + L C++ PL + +E L + +R I R+++ N+G Y+C GRD N + +V + +I P + V AG ++HC++ ++ ++ W S D R + R+ S++ +I Q G+Y C G + + + K + P Q ++ +G ++ C V + Y R +D V +++ + + N +A ++ ++LT +DAG YIC
Sbjct: 2282 IIESLEQNILIIQGEDYSITC--EASGSPYPSI-KWAKVHDFMPENVHISGNV-LTIYGARFENRGVYSCVAENDHGSDLSST--SIDIEPRERPSVK------IVSAPLQTFSVGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGE--ATGVATITVQE-PTLVQIIPDNRDLRLTEGDELSLTC-VGSGVPNPEVEWVNEMALKRDLYSPPSNTAILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERR----GDIGGVDDDSDRDPINYNPPQQQNPGIHQPGSNQLLATDIGDNVTLTCDMFQPL-NTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNV------KTYFVKELVLMPLPRIRFY--PNIPLTVEAGQNLDVHCQV---ENVRPEDVHW--------STDNNRPLPSSV-RIVGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPN----------NARTDSQILVLTNLRPEDAGRYIC 2830
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Match: trol (gene:FBgn0284408 transcript:FBtr0342811) HSP 1 Score: 123.25 bits (308), Expect = 7.353e-28 Identity = 74/213 (34.74%), Postives = 106/213 (49.77%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C+ C NGECI+ + CDG PDC+D SDE Q L +C+ + + W CDGE+DCG+ DE C + C ++QC G IP++F CD DC +G DE C+ P+ I+ S ++ E + LTC TG P P I+WR NWG + ++ +SY G TL + +P D G Y+CE ++
Sbjct: 715 ACTEYQATCMNGECIDKSSICDGNPDCSDASDE------QSCSLGLKCQPNQFMCSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSG-HCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQS--VSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDK---CESKSYGGTG----TLRCPDMRPQDSGAYSCEIIN 911 HSP 2 Score: 60.4622 bits (145), Expect = 9.449e-9 Identity = 64/234 (27.35%), Postives = 99/234 (42.31%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI--------QPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNF 2794
C + C NG+CI++ K C+ DC++G DE++E CR C RC + V+ P C+G +C + DE C G EC +++CN G + + + C+ TDC + DE C + ++ DS I R V C+ G K+ W G R + + RN L I + D G Y CEA+ G ++ Q+ +N
Sbjct: 492 CQANEFRCNNGDCIDARKRCNNVSDCSEGEDENEE-CR-CYANQFRCNNGDCVSGSAP-------CNGYSECSDHSDELNC-GGTQECLPNQFRCNSG-QCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESR--EVIFRCRDEGPARAKVKWSRPGG-----RPLPPGFTDRN-----GRLEIPNIRVEDAGTYVCEAV--GYASYIPGQQVTVNL 700 HSP 3 Score: 59.6918 bits (143), Expect = 1.635e-8 Identity = 132/628 (21.02%), Postives = 244/628 (38.85%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWID-----PRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWI-------TPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVF----GETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCR-INTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNP---KNVRFFEP-------------LELNCEVTPPLRDVTYEIYFNDRLISQS----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRV---RGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRV-EGYQTRNRD-VIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRII-VTPP 1858
++ + E+ I + G + C ++ S P+ +W P N NV LTI +E+ G Y+C A LS+T S+ ++ +++ + IV +TF+ G G + EW+ +P + QS + + E +G Y CR I + G A + V+ P +++ + N G+ + C V + +V + + SN IL++ + G YTC N + +V+ +V E R + GG + + NP +N +P + L C++ PL + +E L + +R I R+++ N+G Y+C GRD N + +V + +I P + V AG ++HC++ ++ ++ W S D R + R+ S++ +I Q G+Y C G + + + K + P Q ++ +G ++ C V + Y R +D V +++ + + N +A ++ ++LT +DAG YIC D + V DL+++ TPP
Sbjct: 2255 IIESLEQNILIIQGEDYSITC--EASGSPYPSI-KWAKVHDFMPENVHISGNV-LTIYGARFENRGVYSCVAENDHGSDLSST--SIDIEPRERPSVK------IVSAPLQTFSVGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGE--ATGVATITVQE-PTLVQIIPDNRDLRLTEGDELSLTC-VGSGVPNPEVEWVNEMALKRDLYSPPSNTAILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERR----GDIGGVDDDSDRDPINYNPPQQQNPGIHQPGSNQLLATDIGDNVTLTCDMFQPL-NTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNV------KTYFVKELVLMPLPRIRFY--PNIPLTVEAGQNLDVHCQV---ENVRPEDVHW--------STDNNRPLPSSV-RIVGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPN----------NARTDSQILVLTNLRPEDAGRYICNSYDV-DRGQQLPEVSIDLQVLTATPP 2829
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 128.642 bits (322), Expect = 1.885e-29 Identity = 76/215 (35.35%), Postives = 107/215 (49.77%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNV--LECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C + C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C C ++ C K IP ++ CD++ DC + DE C P + +S I A RG+TVT TC G P+P I WR NWG + R+ +I TLTI + + GD G Y CEA++
Sbjct: 199 CRADQATCQNGQCISREYLCDGESDCTDGSDESR--CGTPSPCEPNEFKCQ--NGRCALK-----LWRCDGDNDCQDNSDEMNCPTKRPGAACAPEQFVCLSDRKCIPASYQCDEEPDCADRSDEFGCAPPTVTVSPEES--ITASRGDTVTFTCSAIGVPVPIITWRLNWGHIPANNRITMISENGQ-----GTLTIRDVKEGDQGAYTCEAIN 397 HSP 2 Score: 67.3958 bits (163), Expect = 9.730e-11 Identity = 144/641 (22.46%), Postives = 223/641 (34.79%), Query Frame = 2
Query: 116 QEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNL---RGSNVN--LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKN------QVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNP-----VFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQS-----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNS--------TYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC---RVRGETKEAYIIVMAKSKNTEVSPSQQTR-KVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDT--ARATLIVESDLRIIVTP------PIIKLRSGQTATFQCYVLG 1912
+ +A V +G TV C +S + T W N R + N LTI N E G Y C S + L S L V G+ + P V + C + EWI SG+R SS + +N V G+Y C+ + G VQ P + V +P GET+ C+ S T + W I + ++L D GTY C + T + I++ T + N S P +V E L+LNC V P + + L+S + +R I R + G Y C S ++ + T +I E SA V+ G+ C+ V+ G Q W ++ +N N++V P SIM + N Q N+G Y C + G T +++ +S V+P+ R +VGD P+ C+ G V W L + + + ++ I + A +D+G Y+C+ + T R + VE ++ P P+I + G TAT C G
Sbjct: 1692 EPKAQSVRVGSTVSFICTAKSKLPAY--TLVWTRKGNGKLPNRAMDFNGILTIQNVQPEDAGIYVCTGSNM----LGMDEGSAVLYVPAAEGV--QPVATLSPPVQTVKEGDVAQFRCTVTGNPTP--AVEWIGGSGKRISSKAVIRNGQLTISSVDRSDEGEYICKALNTHGEHTARGVLHVQSTGQPNGLPHVQVSPQRVEIYEGETLRLYCRAIGSPTP-------SLKWNKMDRTDIGTLVVPNIRLSDA---GTYLC-VGTNAAGSSEAH---IDVSVT-------KGENILSGVIIQPPSASVIEGEALDLNCLV-PGTSTGSVKWSRAGGLLSSNHQVLETRLRILRASADDTGDYICTVENGPSPQKATVSVSVTSSASRLQTPIISIEPHSA-------------VVKQGESASFRCK--VHNGAQPVRLEW-----KLTNNLPLPDNVKVGPD--SSIMTVTNAQAKNQGTYRCVASNLYGMTHSIVSLIVRESPKAVVTPAGPVRVRVGD--PINLECQAAG--EPRPSVRWHRLDNNRKTMLS--------STVPVDSSAIIQVLVARPEDSGTYVCSAQNNQGTTETRVEVFVEGGPQVPTVPRASVREPMIIVVEGSTATLHCDAHG 2266
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 128.642 bits (322), Expect = 1.969e-29 Identity = 76/215 (35.35%), Postives = 107/215 (49.77%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNV--LECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C + C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C C ++ C K IP ++ CD++ DC + DE C P + +S I A RG+TVT TC G P+P I WR NWG + R+ +I TLTI + + GD G Y CEA++
Sbjct: 199 CRADQATCQNGQCISREYLCDGESDCTDGSDESR--CGTPSPCEPNEFKCQ--NGRCALK-----LWRCDGDNDCQDNSDEMNCPTKRPGAACAPEQFVCLSDRKCIPASYQCDEEPDCADRSDEFGCAPPTVTVSPEES--ITASRGDTVTFTCSAIGVPVPIITWRLNWGHIPANNRITMISENGQ-----GTLTIRDVKEGDQGAYTCEAIN 397 HSP 2 Score: 68.1662 bits (165), Expect = 6.946e-11 Identity = 144/641 (22.46%), Postives = 226/641 (35.26%), Query Frame = 2
Query: 116 QEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNL---RGSNVN--LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKN------QVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNP-----VFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQS-----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNS--------TYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC---RVRGETKEAYIIVMAKSKNTEVSPSQQTR-KVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDT--ARATLIVESDLRIIVTP------PIIKLRSGQTATFQCYVLG 1912
+ +A V +G TV C +S + T W N R + N LTI N E G Y C S + L S L V G+ + P V + C + EWI SG+R SS + +N V G+Y C+ + G VQ P + V +P GET+ C+ S T + ++ D ++ N ++L D GTY C + T + I++ T + N S P +V E L+LNC V P + + L+S + +R I R + G Y C S ++ + T +I E SA V+ G+ C+ V+ G Q W ++ +N N++V P SIM + N Q N+G Y C + G T +++ +S V+P+ R +VGD P+ C+ G V W L + + + ++ I + A +D+G Y+C+ + T R + VE ++ P P+I + G TAT C G
Sbjct: 1696 EPKAQSVRVGSTVSFICTAKSKLPAY--TLVWTRKGNGKLPNRAMDFNGILTIQNVQPEDAGIYVCTGSNM----LGMDEGSAVLYVPAAEGV--QPVATLSPPVQTVKEGDVAQFRCTVTGNPTP--AVEWIGGSGKRISSKAVIRNGQLTISSVDRSDEGEYICKALNTHGEHTARGVLHVQSTGQPNGLPHVQVSPQRVEIYEGETLRLYCRAIGSPTPSLKWNKARMDRTDIGTLVVPN-----IRLSDA---GTYLC-VGTNAAGSSEAH---IDVSVT-------KGENILSGVIIQPPSASVIEGEALDLNCLV-PGTSTGSVKWSRAGGLLSSNHQVLETRLRILRASADDTGDYICTVENGPSPQKATVSVSVTSSASRLQTPIISIEPHSA-------------VVKQGESASFRCK--VHNGAQPVRLEW-----KLTNNLPLPDNVKVGPD--SSIMTVTNAQAKNQGTYRCVASNLYGMTHSIVSLIVRESPKAVVTPAGPVRVRVGD--PINLECQAAG--EPRPSVRWHRLDNNRKTMLS--------STVPVDSSAIIQVLVARPEDSGTYVCSAQNNQGTTETRVEVFVEGGPQVPTVPRASVREPMIIVVEGSTATLHCDAHG 2272 HSP 3 Score: 51.2174 bits (121), Expect = 8.828e-6 Identity = 140/647 (21.64%), Postives = 226/647 (34.93%), Query Frame = 2
Query: 104 VVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVN-------LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDK-TGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVG--------PEFTGQYTCRMTRISDNQVSEGKAFV----QVKALP-IMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQI----LRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNC--EVTPPLRDVTYE-IYFNDRLIS----QSSRHTIPRLDKTNMGVYQCVSRGRDSNTNEL----INYNSTYVIQAEFKSASKIELSEPPGPQIFVRA-GDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAY----IIVMAKSK-NTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQT--RDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLG 1912
+++ + + V+ G + +C+ + P EW N NV +T+TN ++ G Y C AS + S + +R K T G +V P I + C+ A + ++ + + + SS+ + PE +G Y C + + FV QV +P + + V G T C D F T +W ++++ +I L L + G Y C ++ + I D+ Y+T N +VR E + L C TPPLR YE N L S Q I + + G Y+CV+ + + L + Y T+ S LS PQ+ V+A G E C GLQ + W +G + N + + I + + N++Q+NEG Y CRV + + A +++ A K V S QT VG+ VEF C G V WS + I + + + Q D+G Y CT + + L ++S +I P ++ G A C G
Sbjct: 2058 IISIEPHSAVVKQGESASFRCKVHNGAQ--PVRLEWKLTNNLPLPDNVKVGPDSSIMTVTNAQAKNQGTYRCVASNLYGMTHSIVSLIVRESPKAVVTPAGPVRVRVGDP----------INLECQAAGEPRPSVRWHRLDNNRKTMLSSTVPVDSSAIIQVLVARPEDSGTYVCSAQNNQGTTETRVEVFVEGGPQVPTVPRASVREPMIIVVEGSTATLHC-------DAHGFPKPTITWFKERSSLPWRHKIVDNSLILPNVGRQDSGQYVCNATN------HLGTSEVTIMLEVDTP-------PYATSLP-NDVSVRVGEVIRLQCLAHGTPPLR---YEWTKINGSLPSTAQLQGGDLQINLAKENDAGTYRCVASNKVGKSEALAKVSVRYFFTFPHLELCPVFSAASLSVKVSPQVEVKALGSAVEFTC--AAKGGLQIE---WLKEGGVLPPNHHIKDGI----------LRIENLEQSNEGIYTCRVTSQFEHAQDSAKLLIQALPKVKINVRTSVQTVMVGNS--VEFECHAIG--DPEPTVRWSKVGAPLPDHVEI-------------RGNILRIDQVFESDSGQYRCTATNDVGSEHSHVVLNIQSLPQIAALPESKEVTIGSDAVLPCIASG 2636
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 128.642 bits (322), Expect = 2.399e-29 Identity = 76/214 (35.51%), Postives = 106/214 (49.53%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNV--LECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C + C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C C ++ C K IP ++ CD++ DC + DE C P + +S I A RG+TVT TC G P+P I WR NWG + R+ +I TLTI + + GD G Y CEA+
Sbjct: 264 CRADQATCQNGQCISREYLCDGESDCTDGSDESR--CGTPSPCEPNEFKCQ--NGRCALK-----LWRCDGDNDCQDNSDEMNCPTKRPGAACAPEQFVCLSDRKCIPASYQCDEEPDCADRSDEFGCAPPTVTVSPEES--ITASRGDTVTFTCSAIGVPVPIITWRLNWGHIPANNRITMISENGQ-----GTLTIRDVKEGDQGAYTCEAI 461 HSP 2 Score: 67.781 bits (164), Expect = 8.026e-11 Identity = 144/641 (22.46%), Postives = 223/641 (34.79%), Query Frame = 2
Query: 116 QEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNL---RGSNVN--LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKN------QVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNP-----VFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQS-----SRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNS--------TYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC---RVRGETKEAYIIVMAKSKNTEVSPSQQTR-KVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDT--ARATLIVESDLRIIVTP------PIIKLRSGQTATFQCYVLG 1912
+ +A V +G TV C +S + T W N R + N LTI N E G Y C S + L S L V G+ + P V + C + EWI SG+R SS + +N V G+Y C+ + G VQ P + V +P GET+ C+ S T + W I + ++L D GTY C + T + I++ T + N S P +V E L+LNC V P + + L+S + +R I R + G Y C S ++ + T +I E SA V+ G+ C+ V+ G Q W ++ +N N++V P SIM + N Q N+G Y C + G T +++ +S V+P+ R +VGD P+ C+ G V W L + + + ++ I + A +D+G Y+C+ + T R + VE ++ P P+I + G TAT C G
Sbjct: 1757 EPKAQSVRVGSTVSFICTAKSKLPAY--TLVWTRKGNGKLPNRAMDFNGILTIQNVQPEDAGIYVCTGSNM----LGMDEGSAVLYVPAAEGV--QPVATLSPPVQTVKEGDVAQFRCTVTGNPTP--AVEWIGGSGKRISSKAVIRNGQLTISSVDRSDEGEYICKALNTHGEHTARGVLHVQSTGQPNGLPHVQVSPQRVEIYEGETLRLYCRAIGSPTP-------SLKWNKMDRTDIGTLVVPNIRLSDA---GTYLC-VGTNAAGSSEAH---IDVSVT-------KGENILSGVIIQPPSASVIEGEALDLNCLV-PGTSTGSVKWSRAGGLLSSNHQVLETRLRILRASADDTGDYICTVENGPSPQKATVSVSVTSSASRLQTPIISIEPHSA-------------VVKQGESASFRCK--VHNGAQPVRLEW-----KLTNNLPLPDNVKVGPD--SSIMTVTNAQAKNQGTYRCVASNLYGMTHSIVSLIVRESPKAVVTPAGPVRVRVGD--PINLECQAAG--EPRPSVRWHRLDNNRKTMLS--------STVPVDSSAIIQVLVARPEDSGTYVCSAQNNQGTTETRVEVFVEGGPQVPTVPRASVREPMIIVVEGSTATLHCDAHG 2331
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Match: vldlr (very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]) HSP 1 Score: 81.6481 bits (200), Expect = 3.469e-15 Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
V C+ +CR+G+CI CDG+PDC DGSDE E C R C C G P++ W CDGE DC NG DE C GN+ C L++ C+ G + + R F+C+ + DC +G DE C
Sbjct: 64 VRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGV--GSTQCIPVF---WKCDGEKDCDNGEDEINC-GNIT-CAPLEFTCSSG-RCVSRKFVCNGEDDCGDGSDEQDC 184 HSP 2 Score: 65.4698 bits (158), Expect = 3.005e-10 Identity = 45/124 (36.29%), Postives = 57/124 (45.97%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDG-TKSIPRAFICDKDTDCVNGDDESRC 2485
C C NG CI S CDG DC+DGSDE + K C + V W CDGE DC +G DE+ + C ++ C G T+ IP + CD + DC NG+DE C
Sbjct: 29 CEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDETS-------CVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDEINC 145 HSP 3 Score: 58.151 bits (139), Expect = 6.097e-8 Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGL-KYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS C +GECI+ CDG PDC DGSDE R C P +C+ + + C+G DC +G DE C N+ +C +++C G + I + +C+K DC + DE
Sbjct: 235 CSPSEMQCGSGECIHRKWRCDGDPDCKDGSDEKNCSARNCRPDQFKCDDGSCI-------HGSRQCNGFRDCVDGTDEVNC-KNLTQCNSSDQFKCRSG-ECIEMSKVCNKVRDCPDWSDE 346
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Match: vldlr (very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]) HSP 1 Score: 81.6481 bits (200), Expect = 3.671e-15 Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
V C+ +CR+G+CI CDG+PDC DGSDE E C R C C G P++ W CDGE DC NG DE C GN+ C L++ C+ G + + R F+C+ + DC +G DE C
Sbjct: 64 VRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGV--GSTQCIPVF---WKCDGEKDCDNGEDEINC-GNIT-CAPLEFTCSSG-RCVSRKFVCNGEDDCGDGSDEQDC 184 HSP 2 Score: 65.4698 bits (158), Expect = 3.284e-10 Identity = 45/124 (36.29%), Postives = 57/124 (45.97%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDG-TKSIPRAFICDKDTDCVNGDDESRC 2485
C C NG CI S CDG DC+DGSDE + K C + V W CDGE DC +G DE+ + C ++ C G T+ IP + CD + DC NG+DE C
Sbjct: 29 CEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDETS-------CVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDEINC 145 HSP 3 Score: 57.7658 bits (138), Expect = 6.601e-8 Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGL-KYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS C +GECI+ CDG PDC DGSDE R C P +C+ + + C+G DC +G DE C N+ +C +++C G + I + +C+K DC + DE
Sbjct: 235 CSPSEMQCGSGECIHRKWRCDGDPDCKDGSDEKNCSARNCRPDQFKCDDGSCI-------HGSRQCNGFRDCVDGTDEVNC-KNLTQCNSSDQFKCRSG-ECIEMSKVCNKVRDCPDWSDE 346
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Match: sel1l (SEL1L adaptor subunit of ERAD E3 ubiquitin ligase [Source:Xenbase;Acc:XB-GENE-973992]) HSP 1 Score: 120.553 bits (301), Expect = 8.952e-27 Identity = 73/205 (35.61%), Postives = 98/205 (47.80%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQ-EFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF--GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C NG+CI CDG+ DC DGSDE C+P +C+ NG + W CDG++DCG+G DE C G C ++ C IP ++ CD + DC + DE C P +I +S I A RG+TV TC G P P I WR NWG + R+ + + TL I + + D G Y CEA+
Sbjct: 259 CPNGQCIPRDYLCDGEKDCKDGSDEMHCGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCGDGSDELNCPTKGPSDTCAPDQFVCVQARTCIPASYQCDDEADCPDRSDEVGCNPPQVITPPEES--IMASRGDTVRFTCVAIGVPTPIITWRLNWGHIPTSSRVSMTSENGH-----GTLIIRDVKEADQGAYTCEAI 449 HSP 2 Score: 53.9138 bits (128), Expect = 1.919e-6 Identity = 118/585 (20.17%), Postives = 198/585 (33.85%), Query Frame = 2
Query: 251 LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSS-----FFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALP-IMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISN--DQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRL-----DKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQI-----FVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEET-SFIILTQAEMKDAGVYICTEPQTRDTARATLIV---------ESDLR-----IIVTPPIIKLRSGQTATFQCYV 1906
LTI E G Y C S + D + N +L +Q T S N Q+ F + A EW P+G + + V P GQYTCR+ + + V +LP + + G+TV C+ + + T SW ++ LR+ G Y CR+ N Q I I T S S N + R + + + LELNC + P + + + + +S + + + PRL + G Y C T + ++ ++ S I L P +I V G EL+C V G W+ G+ ++ N ++ S + + + + G+Y CR++ +M + + +S Q T G G P+ E + + G + S + + S + + QA D+G+YIC + A++ + D R I + P ++ GQ ATF+C +
Sbjct: 1736 LTIRRVQPEDAGIYVCTGSNMYD--MDEGNATLYVQAGTAT---SPNAAAEPRQLTVQRGQTAEFRCTATGTPTPA---VEWTGPNGGLSPRAVVQGGVLRFHSVEPSDEGQYTCRVHNSAGQHFARVDLRVHSGSLPEVQVSPERTEVREGDTVRLYCRAGGTP-------AATISWRKEGGSLPPQAYGSKLRILQASTADSGEYICRVT----NGAATQQASIIITITRSSGPQQPSGNVPALRIEPSSDTLVEGQTLELNC-LFPSYPNAVVTWHRSGQPLSPNHQVSGPRLRILQASVADSGEYIC------RVTTGPVTQKASILVTITRASGPSIPLGNGPAVRIETSSGSVVEGQTLELNC---VVAGQPDAVVTWHRAGRLLSPNH----------QVSGSRLRITHASPRDSGEYICRIQSGAGVQMASIMVSIEGSSLSEYQDT---GLGSPIRIESSSETVELGQTIELNCLAEGHPGAVVTWHRSGGLPLPSNHQVSGSRMRILQASPADSGIYICRVSSASGSQEASVTINVHSSAQGEPGDARLQSPVISIDPHSATVQRGQNATFKCRI 2278
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Match: sel1l (SEL1L adaptor subunit of ERAD E3 ubiquitin ligase [Source:Xenbase;Acc:XB-GENE-973992]) HSP 1 Score: 118.627 bits (296), Expect = 3.509e-26 Identity = 74/207 (35.75%), Postives = 99/207 (47.83%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF--GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C NG+CI CDG+ DC DGSDE C C+P +C+ NG + W CDG++DCG+G DE C G C ++ C IP ++ CD + DC + DE C P +I +S I A RG+TV TC G P P I WR NWG + R+ + + TL I + + D G Y CEA+
Sbjct: 226 CPNGQCIPRDYLCDGEKDCKDGSDEMH--CGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCGDGSDELNCPTKGPSDTCAPDQFVCVQARTCIPASYQCDDEADCPDRSDEVGCNPPQVITPPEES--IMASRGDTVRFTCVAIGVPTPIITWRLNWGHIPTSSRVSMTSENGH-----GTLIIRDVKEADQGAYTCEAI 416
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Match: sel1l (SEL1L adaptor subunit of ERAD E3 ubiquitin ligase [Source:Xenbase;Acc:XB-GENE-973992]) HSP 1 Score: 114.775 bits (286), Expect = 4.745e-25 Identity = 74/205 (36.10%), Postives = 96/205 (46.83%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQ-EFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF--GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C NG+CI CDG+ DC DGSDE C+P +C+ NG + W CDG++DCG+G DE C G C ++ C IP ++ CD + DC + DE C P +I +S I A RG+TV TC G P P I WR NWG + S N TL I + + D G Y CEA+
Sbjct: 202 CPNGQCIPRDYLCDGEKDCKDGSDEMHCGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCGDGSDELNCPTKGPSDTCAPDQFVCVQARTCIPASYQCDDEADCPDRSDEVGCNPPQVITPPEES--IMASRGDTVRFTCVAIGVPTPIITWRLNWG-------HIPTSSSEN---GHGTLIIRDVKEADQGAYTCEAI 387
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Match: ppp2r2b (protein phosphatase 2 regulatory subunit B, beta [Source:Xenbase;Acc:XB-GENE-946380]) HSP 1 Score: 78.1814 bits (191), Expect = 7.768e-14 Identity = 43/113 (38.05%), Postives = 55/113 (48.67%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
C+NG CI++A CDG+ DC DG DE CD C N W CDGEDDCGNG DE++ + C + C +P ++CD + DC NG DE
Sbjct: 2555 CQNGRCISNAWVCDGQRDCEDGRDE-----LHCD---TSCSWSQFACSKNKCISKQWVCDGEDDCGNGLDESEELCGSVTCAAGFFSCPGSHACVPSHWLCDGERDCPNGSDE 2659 HSP 2 Score: 73.559 bits (179), Expect = 2.217e-12 Identity = 46/126 (36.51%), Postives = 59/126 (46.83%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC-RQCDPLSKRCETYN-GVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGG-LKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+ C +G CI + CDG DC D SDE C R P+S CE P W CDGE DC +G DE C G + +C K+ C + + I A++CD D DC + DE C
Sbjct: 982 CTDKQFRCSSGRCIPAHWVCDGDNDCGDFSDETHANCSRTVSPVSGACEAKQFQCHPDGNCIPELWLCDGEKDCEDGSDERGCNGTLRQCDAKTKFACKNTGRCISNAWVCDGDIDCEDHSDEDYC 1107 HSP 3 Score: 68.5514 bits (166), Expect = 6.485e-11 Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
+C+S C+N CI + CDG+ DC DGSDED E C L+ C N W CDG +DCG+ DE+ C +Y CN+G + I ++ICD++ DC + DE
Sbjct: 829 LCNSEEFQCKNYRCIQESWKCDGEDDCLDGSDEDFENC-----LNHSCPNDQFKCRSNRCIPKRWLCDGANDCGSNEDESNETCLARTCQPHQYSCNNG-RCISLSWICDQEDDCGDRSDE 943 HSP 4 Score: 64.3142 bits (155), Expect = 1.285e-9 Identity = 42/123 (34.15%), Postives = 57/123 (46.34%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C G C +G C A CDG+ DC D SDE C +C PIN C+G++DCG+ DE C N C +QC I + ++CD+D+DC +G DE+ C
Sbjct: 3223 CQPGRFQCGSGLCALPAFICDGENDCGDNSDELNCDTYVCLSGQFKCTKKQKCIPIN------LRCNGQNDCGDEEDEIDCPEN--SCSPDHFQCKTTKHCISKLWVCDEDSDCADGSDEANC 3337 HSP 5 Score: 62.003 bits (149), Expect = 6.383e-9 Identity = 49/154 (31.82%), Postives = 70/154 (45.45%), Query Frame = 2
Query: 2033 VTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRL-CRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
+ T D +CR R + C+ S C NGECI + CDG C D SDE Q +C R C + C + + P N + C+ EDDCG+ DE C + C +++C DGT I ++ C++ DC + DE C
Sbjct: 2348 LITPDGRINCSCRGDRVLVNDNRCKNSSCNMFSEFECANGECIEYHQTCDGIVHCKDRSDEKQSYCENRSCWRGFRLCGNHRCI-PNNKV------CNDEDDCGDNSDELDC--KISTCASTEFRCTDGT-CITKSAQCNQIIDCADASDEKNC 2491 HSP 6 Score: 60.077 bits (144), Expect = 2.301e-8 Identity = 41/125 (32.80%), Postives = 58/125 (46.40%), Query Frame = 2
Query: 2150 ECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC--FGNVLE-----------CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CI+ CD DCADGSDE + C +C+ N + HW CDG++DCG+ DE C F ++L+ C ++ C++G I F CD + DC +G DE C
Sbjct: 3314 HCISKLWVCDEDSDCADGSDEANCDKKACGLHEFQCKNKNCIPD-------HWRCDGQNDCGDNSDEESCSKFYSILQINIIQCSASFTCALKEFLCSNG-DCISSRFWCDGEYDCADGKDEKNC 3430 HSP 7 Score: 58.5362 bits (140), Expect = 8.151e-8 Identity = 47/151 (31.13%), Postives = 69/151 (45.70%), Query Frame = 2
Query: 2045 DNGTRFTCRKGRSTAEVLVL---VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDP----LSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
DN +C K S ++ ++ C+ LC NG+CI+S +CDG+ DCADG DE + C+P RC P+ W CDG DC +G DE C ++ CN+ T + ++CD + DC + DE
Sbjct: 3369 DNSDEESCSKFYSILQINIIQCSASFTCALKEFLCSNGDCISSRFWCDGEYDCADGKDE-----KNCEPGIYTNQFRCRNRAYCIPL------RWFCDGVQDCVDGSDEDNCE------RADEFLCNN-TLCKLQLWLCDGEDDCGDNSDE 3501 HSP 8 Score: 58.151 bits (139), Expect = 8.868e-8 Identity = 45/132 (34.09%), Postives = 58/132 (43.94%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICD---KDTDCVNGDDESRC 2485
++ C + CR+ CI CDG DC DE E C R C P C ++ W CD EDDCG+ DE + CG KYQ +S PR+ IC+ + DC +G DES C
Sbjct: 867 LNHSCPNDQFKCRSNRCIPKRWLCDGANDCGSNEDESNETCLARTCQPHQYSCNNGRCIS-------LSWICDQEDDCGDRSDE------MASCG--KYQ-----RSPPRSLICNIFTANDDCGDGSDESGC 978 HSP 9 Score: 56.9954 bits (136), Expect = 2.150e-7 Identity = 43/128 (33.59%), Postives = 57/128 (44.53%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPI---YQAHWACDGEDDCGNGYDEAKCFG-NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+S C +G CI + C+ DCAD SDE C K G N W CDG +DCG+ DE KC N +C ++C +G + I A++CD DC +G DE C
Sbjct: 2456 TCASTEFRCTDGTCITKSAQCNQIIDCADASDEKNCNNTDCTHYYKLGVKTAGFIRCNSTSLCILPEWICDGANDCGDYSDELKCPAQNKQKCEENYFECQNG-RCISNAWVCDGQRDCEDGRDELHC 2582 HSP 10 Score: 56.9954 bits (136), Expect = 2.460e-7 Identity = 41/114 (35.96%), Postives = 55/114 (48.25%), Query Frame = 2
Query: 2144 NGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINP--IYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQC-NDGTKSIPRAFICDKDTDCVNGDDE 2476
+G CI CDG+ DC DGSDE R C+ ++C+ A N W CDG+ DC + DE C G + CG KY C ND + + +C+ DC +G DE
Sbjct: 1039 DGNCIPELWLCDGEKDCEDGSDE-----RGCNGTLRQCDAKTKFACKNTGRCISNAWVCDGDIDCEDHSDEDYCEGYI--CGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDE 1145 HSP 11 Score: 56.6102 bits (135), Expect = 2.839e-7 Identity = 45/145 (31.03%), Postives = 58/145 (40.00%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL--------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE---AKCFGNVLECGGLKYQCNDGTKSIPRAFI 2437
F C+ GR + V D CS C +CI+ CDG+ DC +G DE +E C C C + P +HW CDGE DC NG DE A C V C + CN+ IP+ F+
Sbjct: 2553 FECQNGRCISNAWVCDGQRDCEDGRDELHCDTSCSWSQFACSKNKCISKQWVCDGEDDCGNGLDESEELCGSVTCAAGFFSCPGSHACVP------SHWLCDGERDCPNGSDELSTADC-APVTTCDENAFMCNNKV-CIPKQFM 2689 HSP 12 Score: 55.4546 bits (132), Expect = 6.824e-7 Identity = 46/161 (28.57%), Postives = 62/161 (38.51%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDE------------------------------DQEFCR-QCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCFGNVL----ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C C NG CI+ + CD + DC D SDE D+ C C RC + + AHW CDG++DCG+ DE A C V C ++QC+ IP ++CD + DC +G DE C
Sbjct: 911 TCQPHQYSCNNGRCISLSWICDQEDDCGDRSDEMASCGKYQRSPPRSLICNIFTANDDCGDGSDESGCSLSCTDKQFRCSSGRCIP-------AHWVCDGDNDCGDFSDETHANCSRTVSPVSGACEAKQFQCHPDGNCIPELWLCDGEKDCEDGSDERGC 1064 HSP 13 Score: 53.9138 bits (128), Expect = 2.059e-6 Identity = 40/125 (32.00%), Postives = 54/125 (43.20%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDED---------QEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+N CI CDG+ DC D SDE+ Q QC S C + + + CDGE DC +G DE C + +++C + IP + CD DCV+G DE C
Sbjct: 3349 CKNKNCIPDHWRCDGQNDCGDNSDEESCSKFYSILQINIIQCSA-SFTCALKEFLCSNGDCISSRFWCDGEYDCADGKDEKNCEPGIYT---NQFRCRNRAYCIPLRWFCDGVQDCVDGSDEDNC 3469
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Match: ppp2r2b (protein phosphatase 2 regulatory subunit B, beta [Source:Xenbase;Acc:XB-GENE-946380]) HSP 1 Score: 78.1814 bits (191), Expect = 8.011e-14 Identity = 43/113 (38.05%), Postives = 55/113 (48.67%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
C+NG CI++A CDG+ DC DG DE CD C N W CDGEDDCGNG DE++ + C + C +P ++CD + DC NG DE
Sbjct: 2563 CQNGRCISNAWVCDGQRDCEDGRDE-----LHCD---TSCSWSQFACSKNKCISKQWVCDGEDDCGNGLDESEELCGSVTCAAGFFSCPGSHACVPSHWLCDGERDCPNGSDE 2667 HSP 2 Score: 73.1738 bits (178), Expect = 2.508e-12 Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS C G+CI++ CDG DC G DE + C+P+S C + V A+ C+GE DC +G DE C V EC +++C + IP + CD DCV+G DE C
Sbjct: 3427 CSKEQFQCSTGQCISAKWKCDGHEDCKSGEDE-----KNCEPVSPTCSSSEYVCDSGGCVSAYLRCNGEYDCADGSDENDC---VAECKENQFRCRNRAYCIPLRWFCDGVQDCVDGSDEDNC 3541 HSP 3 Score: 68.9366 bits (167), Expect = 5.458e-11 Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
+C+S C+N CI + CDG+ DC DGSDED E C L+ C N W CDG +DCG+ DE+ C +Y CN+G + I ++ICD++ DC + DE
Sbjct: 830 LCNSEEFQCKNYRCIQESWKCDGEDDCLDGSDEDFENC-----LNHSCPNDQFKCRSNRCIPKRWLCDGANDCGSNEDESNETCLARTCQPHQYSCNNG-RCISLSWICDQEDDCGDRSDE 944 HSP 4 Score: 64.3142 bits (155), Expect = 1.269e-9 Identity = 42/123 (34.15%), Postives = 57/123 (46.34%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C G C +G C A CDG+ DC D SDE C +C PIN C+G++DCG+ DE C N C +QC I + ++CD+D+DC +G DE+ C
Sbjct: 3231 CQPGRFQCGSGLCALPAFICDGENDCGDNSDELNCDTYVCLSGQFKCTKKQKCIPIN------LRCNGQNDCGDEEDEIDCPEN--SCSPDHFQCKTTKHCISKLWVCDEDSDCADGSDEANC 3345 HSP 5 Score: 62.003 bits (149), Expect = 6.800e-9 Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C NGECI + CDG C D SDE Q +C R C + C + + P N + C+ EDDCG+ DE C + C +++C DGT I ++ C++ DC + DE C
Sbjct: 2392 CANGECIEYHQTCDGIVHCKDRSDEKQSYCENRSCWRGFRLCGNHRCI-PNNKV------CNDEDDCGDNSDELDC--KISTCASTEFRCTDGT-CITKSAQCNQIIDCADASDEKNC 2499 HSP 6 Score: 61.2326 bits (147), Expect = 1.269e-8 Identity = 40/126 (31.75%), Postives = 58/126 (46.03%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEF--CRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGG-LKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+ C +G CI + CDG DC D S + + R +K+ + + P W CDGE DC +G DE C G + +C K+ C + + I A++CD D DC + DE C
Sbjct: 992 CTDKQFRCSSGRCIPAHWVCDGDNDCGDFSMDSRRISGLRHWHSPAKQFQCH----PDGNCIPELWLCDGEKDCEDGSDERGCNGTLRQCDAKTKFACKNTGRCISNAWVCDGDIDCEDHSDEDYC 1113 HSP 7 Score: 60.8474 bits (146), Expect = 1.404e-8 Identity = 39/112 (34.82%), Postives = 53/112 (47.32%), Query Frame = 2
Query: 2150 ECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CI+ CD DCADGSDE + C +C+ N + HW CDG++DCG+ DE C C ++ C++G I F CD + DC +G DE C
Sbjct: 3322 HCISKLWVCDEDSDCADGSDEANCDKKACGLHEFQCKNKNCIPD-------HWRCDGQNDCGDNSDEESCKPQT--CALKEFLCSNG-DCISSRFWCDGEYDCADGSDERNC 3423 HSP 8 Score: 60.4622 bits (145), Expect = 2.035e-8 Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC-FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
V P CSS +C +G C+++ C+G+ DCADGSDE+ + +C RC P+ W CDG DC +G DE C N+ C ++ CN+ T + ++CD + DC + DE
Sbjct: 3464 VSPTCSSSEYVCDSGGCVSAYLRCNGEYDCADGSDEN-DCVAECKENQFRCRNRAYCIPL------RWFCDGVQDCVDGSDEDNCERANI--CRADEFLCNN-TLCKLQLWLCDGEDDCGDNSDE 3578 HSP 9 Score: 56.9954 bits (136), Expect = 2.000e-7 Identity = 43/128 (33.59%), Postives = 57/128 (44.53%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPI---YQAHWACDGEDDCGNGYDEAKCFG-NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+S C +G CI + C+ DCAD SDE C K G N W CDG +DCG+ DE KC N +C ++C +G + I A++CD DC +G DE C
Sbjct: 2464 TCASTEFRCTDGTCITKSAQCNQIIDCADASDEKNCNNTDCTHYYKLGVKTAGFIRCNSTSLCILPEWICDGANDCGDYSDELKCPAQNKQKCEENYFECQNG-RCISNAWVCDGQRDCEDGRDELHC 2590 HSP 10 Score: 56.9954 bits (136), Expect = 2.428e-7 Identity = 43/115 (37.39%), Postives = 57/115 (49.57%), Query Frame = 2
Query: 2144 NGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINP---IYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQC-NDGTKSIPRAFICDKDTDCVNGDDE 2476
+G CI CDG+ DC DGSDE R C+ ++C+ A N I A W CDG+ DC + DE C G + CG KY C ND + + +C+ DC +G DE
Sbjct: 1045 DGNCIPELWLCDGEKDCEDGSDE-----RGCNGTLRQCDAKTKFACKNTGRCISNA-WVCDGDIDCEDHSDEDYCEGYI--CGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDE 1151 HSP 11 Score: 56.6102 bits (135), Expect = 3.234e-7 Identity = 45/145 (31.03%), Postives = 58/145 (40.00%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL--------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE---AKCFGNVLECGGLKYQCNDGTKSIPRAFI 2437
F C+ GR + V D CS C +CI+ CDG+ DC +G DE +E C C C + P +HW CDGE DC NG DE A C V C + CN+ IP+ F+
Sbjct: 2561 FECQNGRCISNAWVCDGQRDCEDGRDELHCDTSCSWSQFACSKNKCISKQWVCDGEDDCGNGLDESEELCGSVTCAAGFFSCPGSHACVP------SHWLCDGERDCPNGSDELSTADC-APVTTCDENAFMCNNKV-CIPKQFM 2697
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Match: Hspg2 (perlecan (heparan sulfate proteoglycan 2) [Source:MGI Symbol;Acc:MGI:96257]) HSP 1 Score: 128.642 bits (322), Expect = 2.693e-29 Identity = 79/217 (36.41%), Postives = 103/217 (47.47%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ---CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF----GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C C +G CI CDG+ DC DGSDE C C+P CE NG + W CDG+ DC + DEA C G V CG +QC + IP +F CD+++DC + DE C+ P ++ S I A RG+TVT TC TG P P I WR NWG + R+ + TL I + + D G Y CEA++
Sbjct: 285 CGPQEASCHSGHCIPRDYLCDGQEDCRDGSDELG--CASPPPCEPNEFACE--NGHCALK-----LWRCDGDFDCEDRTDEANCSVKQPGEV--CGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPQQS--IQASRGQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTSE-----GGRGTLIIRDVKEADQGAYTCEAMN 483
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Match: Hspg2 (perlecan (heparan sulfate proteoglycan 2) [Source:MGI Symbol;Acc:MGI:96257]) HSP 1 Score: 128.257 bits (321), Expect = 2.786e-29 Identity = 79/217 (36.41%), Postives = 103/217 (47.47%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ---CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF----GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C C +G CI CDG+ DC DGSDE C C+P CE NG + W CDG+ DC + DEA C G V CG +QC + IP +F CD+++DC + DE C+ P ++ S I A RG+TVT TC TG P P I WR NWG + R+ + TL I + + D G Y CEA++
Sbjct: 285 CGPQEASCHSGHCIPRDYLCDGQEDCRDGSDELG--CASPPPCEPNEFACE--NGHCALK-----LWRCDGDFDCEDRTDEANCSVKQPGEV--CGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPQQS--IQASRGQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTSE-----GGRGTLIIRDVKEADQGAYTCEAMN 483
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 79.337 bits (194), Expect = 1.618e-14 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
V C+ +C+NG+C+ + CDG PDC DGSDE E QC + R + A W CDGE+DC NG DE C GN+ C ++ C+ G + + R F+C+ DC +G DE C P
Sbjct: 68 VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPE---QCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENC-GNIT-CSADEFTCSSG-RCVSRNFVCNGQDDCDDGSDELDCAPP 191 HSP 2 Score: 68.5514 bits (166), Expect = 3.482e-11 Identity = 48/130 (36.92%), Postives = 59/130 (45.38%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAK-------CFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C S C NG CI CDG DCADGSDE + C + K C + V W CDG+ DC +G DE+ C N + CG QC IP ++ CD + DC NG+DE C
Sbjct: 33 CDSSQFQCTNGRCITLLWKCDGDEDCADGSDE-----KNC--VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQC------IPVSWRCDGENDCDNGEDEENC 149 HSP 3 Score: 64.3142 bits (155), Expect = 7.863e-10 Identity = 51/183 (27.87%), Postives = 72/183 (39.34%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLT 2563
FTC GR + V P C + C CI + CD DC+D SDE E C + + +C T W CDG+ DC +G DE C C +++C DG+ I + C+ DCV+G DE C + + L K R GE + ++
Sbjct: 159 FTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRT--CRPDQFECEDGS-CIHGSRQCNGIRDCVDGSDEVNCKN---VNQCLGPGKFKCRSGECIDMS 335 HSP 4 Score: 58.9214 bits (141), Expect = 3.684e-8 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 2
Query: 2102 LVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLEC-GGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
++ C + C +GECI+ CDG PDC DGSDE R C P CE + + C+G DC +G DE C NV +C G K++C G + I + +CD++ DC + DE
Sbjct: 234 VIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCI-------HGSRQCNGIRDCVDGSDEVNC-KNVNQCLGPGKFKCRSG-ECIDMSKVCDQEQDCRDWSDE 350
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 79.337 bits (194), Expect = 1.712e-14 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
V C+ +C+NG+C+ + CDG PDC DGSDE E QC + R + A W CDGE+DC NG DE C GN+ C ++ C+ G + + R F+C+ DC +G DE C P
Sbjct: 68 VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPE---QCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENC-GNIT-CSADEFTCSSG-RCVSRNFVCNGQDDCDDGSDELDCAPP 191 HSP 2 Score: 68.5514 bits (166), Expect = 3.607e-11 Identity = 48/130 (36.92%), Postives = 59/130 (45.38%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAK-------CFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C S C NG CI CDG DCADGSDE + C + K C + V W CDG+ DC +G DE+ C N + CG QC IP ++ CD + DC NG+DE C
Sbjct: 33 CDSSQFQCTNGRCITLLWKCDGDEDCADGSDE-----KNC--VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQC------IPVSWRCDGENDCDNGEDEENC 149 HSP 3 Score: 64.3142 bits (155), Expect = 7.429e-10 Identity = 51/183 (27.87%), Postives = 72/183 (39.34%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLT 2563
FTC GR + V P C + C CI + CD DC+D SDE E C + + +C T W CDG+ DC +G DE C C +++C DG+ I + C+ DCV+G DE C + + L K R GE + ++
Sbjct: 159 FTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRT--CRPDQFECEDGS-CIHGSRQCNGIRDCVDGSDEVNCKN---VNQCLGPGKFKCRSGECIDMS 335 HSP 4 Score: 58.9214 bits (141), Expect = 3.830e-8 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 2
Query: 2102 LVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLEC-GGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
++ C + C +GECI+ CDG PDC DGSDE R C P CE + + C+G DC +G DE C NV +C G K++C G + I + +CD++ DC + DE
Sbjct: 234 VIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCI-------HGSRQCNGIRDCVDGSDEVNC-KNVNQCLGPGKFKCRSG-ECIDMSKVCDQEQDCRDWSDE 350
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Match: Vldlr (very low density lipoprotein receptor [Source:MGI Symbol;Acc:MGI:98935]) HSP 1 Score: 78.1814 bits (191), Expect = 3.544e-14 Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDES--RCIQPIIIQESLDSYKINARRGETVTLTCQVTGFP 2584
V C+ +C+NG+C+ + CDG PDC DGSDE E CR C C + V+ ++ C+G+DDC +G DE C CG ++QC+ + IP +++CD D DC + DES +C + +I + +I GE + + G P
Sbjct: 68 VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCRNITCSADEFTCSSGRCVS-------RNFVCNGQDDCDDGSDELDCAPPT--CGAHEFQCS-TSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDP 221 HSP 2 Score: 67.3958 bits (163), Expect = 8.538e-11 Identity = 44/126 (34.92%), Postives = 59/126 (46.83%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
C S C NG CI CDG DCADGSDE + C + K C + V W CDG+ DC +G DE+ + C ++ C+ G + + R F+C+ DC +G DE C P
Sbjct: 33 CDSSQFQCTNGRCITLLWKCDGDEDCADGSDE-----KNC--VKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCRNITCSADEFTCSSG-RCVSRNFVCNGQDDCDDGSDELDCAPP 150 HSP 3 Score: 64.3142 bits (155), Expect = 7.199e-10 Identity = 51/183 (27.87%), Postives = 72/183 (39.34%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLT 2563
FTC GR + V P C + C CI + CD DC+D SDE E C + + +C T W CDG+ DC +G DE C C +++C DG+ I + C+ DCV+G DE C + + L K R GE + ++
Sbjct: 118 FTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRT--CRPDQFECEDGS-CIHGSRQCNGIRDCVDGSDEVNCKN---VNQCLGPGKFKCRSGECIDMS 294 HSP 4 Score: 58.9214 bits (141), Expect = 3.333e-8 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 2
Query: 2102 LVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLEC-GGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
++ C + C +GECI+ CDG PDC DGSDE R C P CE + + C+G DC +G DE C NV +C G K++C G + I + +CD++ DC + DE
Sbjct: 193 VIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCI-------HGSRQCNGIRDCVDGSDEVNC-KNVNQCLGPGKFKCRSG-ECIDMSKVCDQEQDCRDWSDE 309
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Match: sp|P98160|PGBM_HUMAN (Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4) HSP 1 Score: 123.635 bits (309), Expect = 6.323e-27 Identity = 80/214 (37.38%), Postives = 105/214 (49.07%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDE-DQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE--CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVI-ESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C CRNG CI CDG+ DC DGSDE D C+P C NG + W CDG+ DC + DEA C E CG +++C IP +F CD+++DC + DE C+ P ++ +S I A RG+TVT TC G P P I WR NWG + + R+ V E R TL I + + D G Y CEA++
Sbjct: 285 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG--NGHCALK-----LWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRES--IQASRGQTVTFTCVAIGVPTPIINWRLNWGHIPSHPRVTVTSEGGRG------TLIIRDVKESDQGAYTCEAMN 483
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Match: sp|Q05793|PGBM_MOUSE (Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.264e-26 Identity = 77/208 (37.02%), Postives = 101/208 (48.56%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQ-EFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF----GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
C +G CI CDG+ DC DGSDE C+P CE NG + W CDG+ DC + DEA C G V CG +QC + IP +F CD+++DC + DE C+ P ++ S I A RG+TVT TC TG P P I WR NWG + R+ + TL I + + D G Y CEA++
Sbjct: 292 CHSGHCIPRDYLCDGQEDCRDGSDELGCASPPPCEPNEFACE--NGHCALK-----LWRCDGDFDCEDRTDEANCSVKQPGEV--CGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPQQS--IQASRGQTVTFTCVATGVPTPIINWRLNWGHIPAHPRVTMTSE-----GGRGTLIIRDVKEADQGAYTCEAMN 483
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Match: sp|Q06561|UNC52_CAEEL (Basement membrane proteoglycan OS=Caenorhabditis elegans OX=6239 GN=unc-52 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 6.304e-26 Identity = 101/321 (31.46%), Postives = 148/321 (46.11%), Query Frame = 2
Query: 1835 LRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMAN-GGRAADTQRTTVEKLEAGKVQL----TYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSR----------LCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG--NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALS 2746
++I V P ++R G+ +F+C + S YP A GG + + +L VQL TY V+ + T + R+T V+ S+G R C N EC+ + CDG+PDC D SDE C +S+ CE N Q W CDG+DDCG+ DE C + +C ++QC+D + +P +F CD DC +G DE C+QP ++ + ++ RG T +LTC+ P P I WR NWG + R + + TLTI + QP D G Y CEA++
Sbjct: 45 VQITVFPSEKEVRDGRDVSFECRARTSDNS-VYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGTYICVSDYNGNTV----EARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDE-----ANCPAISRTCEPNEFKCNNNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDPPQTNLQV--PRGTTFSLTCKAVAVPEPYINWRLNWGPVCEPPRCL-----QTSEGGYGTLTIHDAQPVDQGAYTCEAIN 348
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Match: sp|P35950|LDLR_CRIGR (Low-density lipoprotein receptor OS=Cricetulus griseus OX=10029 GN=LDLR PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.358e-15 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C CR+G+CI S CDG P+C DGSDE E C SK V+ P W CDG+ DC NG DE C C +++C DG K I + F+CD+D DCV+G DE+ C
Sbjct: 27 CDRNEFRCRDGKCIASKWVCDGSPECPDGSDESSETCMSVTCQSKEFSCGGRVSRCIP---NSWRCDGQTDCENGSDEQGCAPKT--CSQDEFRCQDG-KCISQKFVCDQDQDCVDGSDEAHC 143
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Match: sp|P01131|LDLR_BOVIN (Low-density lipoprotein receptor OS=Bos taurus OX=9913 GN=LDLR PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 7.783e-15 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
V+ C C++G+CI+ CDG +C DGSDE QE C+ ++ + ++ +N W CDG+ DC NG DE C C +++CNDG K I F+CD D DC++G DE+ C P
Sbjct: 23 VEDNCGRNEFQCQDGKCISYKWVCDGTAECQDGSDESQETCKS---VTCKMGDFSCGGRVNRCISGSWRCDGQVDCENGSDEEGCSPKT--CSQDEFRCNDG-KCIAPKFVCDLDLDCLDGSDEASCPMP 146
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Match: A0A1Z1R313 (Low density lipoprotein receptor-related 3 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 1731.84 bits (4484), Expect = 0.000e+0 Identity = 860/927 (92.77%), Postives = 868/927 (93.64%), Query Frame = 2
Query: 86 ILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEG----------------------------------------KYECRVRG-ETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
ILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVE KCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTG RSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEG ++ CRV G +T+ +I SK E +PSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIDSRWSRSDDSAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAG SPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFT RKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAF+CDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNC +
Sbjct: 1 ILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVELKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGSRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGNTNAGSEAKPKRLTSLYGKSKNTEVPPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSK--ETAPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIDSRWSRSDDSAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGGSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTRRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFVCDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCSHV 925
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Match: A0A1Z1R275 (Low density lipoprotein receptor-related 1 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 475.707 bits (1223), Expect = 1.327e-149 Identity = 282/802 (35.16%), Postives = 430/802 (53.62%), Query Frame = 2
Query: 437 IIFMACKEASGASANYKYEWITPSGERQSSSSF-FKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTD-----NKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQT-RNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL---RIIVTPPIIKLRSGQTATFQCYVLGA-GRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR-KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLM 2788
I +AC + A W+ G+ +++ + + + + G Y C + ++ D Q+ F + L I I +S + + E+++ Q+ + +D + +TY+WL+ +N I N IL++ + D++ G Y C+ ++ + Y + ++ Y + +NP R+ E L CEV P +++ Y Y D I I K N+G Y+CV+ + + ++ + Q F SKIEL+ PGPQ++V G+K+ELHCEI ++G +GK A WY G++ + D I ++ RL YVS++V+ +I Q NEG YECRV KE +IV+ E SP KV +G VEFHCRVE + +N ++ W+F SKE NI +D A++TSFI+L +AE+ D+G YICTEP + TAR+ LIV D + +TP I++R+GQ +C+ GR+ PEF N R + + +LT ++ +DN C +GR + + + D +C G R C+NGEC+ +AKFCD CAD SDED CR+CDP+S++CE N V P + HW CDGE+DCGNGYDE C G L CGG + C+D K+IPR ++CD++ DC G+DE+ C P I + S + K+ A + + VTLTC+ TG PLP ++WRFNWGC+ N R +C + S+LTI +F+ GDDGIYNCEALS +R++S D+Q+++
Sbjct: 47 FINIACNVTNYALNETSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR----FNRTLHLKITIPSISIDILPEESLKIGGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLK----------QSVSYKIKIITNPALFRYGERFSLRCEVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGK--LDLMEESIQQFAFFRESKIELTTKPGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGD-----IPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPP--ILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQ-TARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKPIGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSD-ICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQVLPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSD-NKTIPRGYVCDENIDCSQGEDETGCTSPQITKTS--ATKVVATKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNSVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQVIL 820 HSP 2 Score: 65.855 bits (159), Expect = 4.020e-7 Identity = 104/501 (20.76%), Postives = 199/501 (39.72%), Query Frame = 2
Query: 197 TTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASA----NYKYEWITPSGERQSSSSFFKNQVGPE-FTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV---FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQ--SMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEV--TPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKI-----ELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQE------INSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC-RVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTR 1624
T+ W+D + +N L I + + G Y C ++ D ++ N++L L++ + S + ++ + + G I C + ++ Y W+ + +++ + V E G+Y C+ +++ E +V +K K+ NP +GE +C+V+ + + Y+W K+ I NDQ L +K + GTY C + Q S ++ + + F +S E +T+ P+ V E EL+CE+ + R E Y N + + RLD Q VS S+ +++ N + + K + I L E P + V+ G E HC + ++ N W F+ +E I + + N ++ + S +VL + ++ G Y C G+T + +IV+ ++ + + +V G V+ C + Q R
Sbjct: 62 TSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR-FNRTLHLKIT----IPSISIDILPEESLKI--GGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLKQSVSYKIKIITNPALFRYGERFSLRCEVE------PFYQNIKYTWY-KKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGKLDLMEESIQQFAFFRESKI------ELTTK--PGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGDIPLVNRLDG------QYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQ--TSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGR 532 HSP 3 Score: 20.0162 bits (40), Expect = 4.020e-7 Identity = 11/28 (39.29%), Postives = 14/28 (50.00%), Query Frame = 1
Query: 25 TSPKVIS*FQLNEVSIVVFRYSVVSICC 108
TSP I+ F L SIV ++I C
Sbjct: 25 TSPPNITFFPLKNDSIVKSEMQFINIAC 52
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Match: T1DBM0 (LDL-1 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 472.241 bits (1214), Expect = 3.090e-148 Identity = 292/809 (36.09%), Postives = 431/809 (53.28%), Query Frame = 2
Query: 440 IFMACKEASGASANYKYEWITPSGERQSSSS--FFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNK-----VFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEI-RFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGY-QTRNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIV---ESDLRIIVTPPIIKLRSGQTATFQCYV-LGAGRSPDYPEFFMANG---GRAADTQRTTVEKLEAGKVQLTYRAVT----TNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE-CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN 2800
+++ C + + W+ +G S + +FK+ + G Y C + + S V K F L I I +S N + E+++ Q+ ++ +D K + + ++ W+D KN +SN L + + D++ GTY CR+ + + + Y ++ + R +N Y + S+ P + F + LNC+VTP + Y ++ IS + IP K N+GVY+C++ + N N L + + Q SK+EL E PG I V +G+K+ELHCEI V +G WY D+ NI + + VS++V+RNI NEGKYECR + KE I+V+ + + +P +V +G VEFHCRV+ + +N D+ W F SK+ +I + ++ EETSF+ L A M D G ICTEP + +A++ LIV E ++ I +TP I++R Q +C+ GR+ P+FF +N GR A TTV G+ + A + DN F C G + + C G R C+NG+C+ +AKFCDGK DC D SDED C+ CDP+SK+CE + G+ P Y HWACDGE+DCGNGYDE C LE CGG ++C+DG K+IPR ++CD++ DC NGDDE+ C P II+ S + +I A R + VT+TC+ +G PLP I+WRFNWGC+ R V NC STLTI+ FQPGDDGIYNCEALS +RA+S D+Q+++ RN
Sbjct: 55 LYVLCNVTNLKPNTFTARWLDKNGVVVSPNKILYFKSLLKHR-EGIYKCEVEKDS---VKSNKTF----QLNITIPSISINVLPDESLQIGGQISRNCSDFKSMNLSITDTLSHEWVDEKNKTVSNSNFLVIPIKDESVSGTYECRLKSFATSKVYTAKTMVNVQRKVVSAN--------YKIQISTTPGTITFAKMFTLNCDVTPS-NGIQYRWLKDNIEISTNKTIYIPSFKKENIGVYKCIAIVKLENGNNL-TLEAESLQQLTLFRHSKVELDETPGYTIIVHSGEKKELHCEIEVEAKKRGVEVEWYINNTLFRRGDFR--NIGRLDKELVSMLVIRNIVAQNEGKYECRYADKRKEINIVVLTEQGIIQTNPP--LLRVKEGQSVEFHCRVDNFANVKNVDLKWKFRSKDGSVTYDIPNDRWETTNPDITEETSFLELNSAVMADNGYLICTEPNGQ-SAQSELIVTAGEGNV-ITITPKEIRVRPHQRFDIECFTKTREGRASGQPKFFFSNNKAVGRDARFVETTV-----GQSHIRLSAPNGLPLSEDNMDVF-CGSGDQRVSSKIYIKDTCPPGHRYCQNGQCLENAKFCDGKVDCEDKSDEDPNLCKACDPISKKCEVHRGIIPTKNYYLVHWACDGEEDCGNGYDEENCGEGYLENCGGKFFKCSDG-KNIPRGYLCDQNADCDNGDDENLCTYPTIIKTS--TKEIKAARTQQVTMTCEASGKPLPAIVWRFNWGCIQQLPRFSVRSYSSNCTTVSSTLTINNFQPGDDGIYNCEALSSRQRAFSDDFQVVLQNRN 830
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Match: A0A504YLF0 (Basement membrane-specific heparan sulfate proteoglycan core protein OS=Fasciola gigantica OX=46835 GN=FGIG_04893 PE=4 SV=1) HSP 1 Score: 445.277 bits (1144), Expect = 7.868e-138 Identity = 279/833 (33.49%), Postives = 414/833 (49.70%), Query Frame = 2
Query: 407 PQVYETFASGIIFMACKEASGASANYKYEWI--TPSGERQSSSS----FFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQV-----KALP----IMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTP-PLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSA--SKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDY--ARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGY-QTRNRDVIWSFLSKETGQI----TNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL--RIIVTPPIIKLRSGQTATFQCYVL-GAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTC--RKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG-NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLT-NERRMVVIESYRNCG----ATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNF 2794
P E G ++ C ++ S Y +WI P Q SS + E C+ TR+SD Q E +++ +LP + I + + + +C + ++ N+ F + WLD +++N L L L+D G YTC +S N + + ++ + ++ T V P E+ C V P P VTY Y NDR++ +R +P L ++G Y C +AE+ A ++S PPG + G+ RELHCE G L + W+F+GQ + + A + + RL VSI+ L ++ + G YECR+ G+ K+ ++IV + EV+PS+ T V +G PVEFHCR G Q NR++ W + G I N ++ + R D A TSFI +A D G+YIC P AR L V S + R+++TPP++K+R F+CYV+ GR D F R R E++ A +V+ R+ +T+ NGT+ C A +++++ C G R CR+G+C+ + +FCDG+ DC DGSDED C +C+P K+CE Y P+ Y HW CDGEDDCGNG+DEA C ++ +CG + C + + IPR+F+CDKD DC G+DE C+ P I ES+ Y+ + R G VTLTC+VTG PLP++IWRFNWGCL N+ R + +NC + +STLTIS +PGDDGIYNCE L+G RA S DY +++ +
Sbjct: 48 PGPLEVNLGGQVYSRCTVSN--SHEYSVKWIRRLPDHSTQEVSSTAMLYIPEARAEEMQHPLYCQATRLSDGQTFEKALNIRMVGYGGASLPADLTLTIRSLPAEDLSTGRIMRQCLFEGNEEVNEQFD---FRWLDQNGRVVTNGDALYLMLEDPADLGNYTCEATHRS------SNNIYQAKYHVTRPSHAQASQYVVTVVPDAASQVLLGRPYEMLCRVEPMPSEPVTYRWYHNDRMVGSDARLRLPSLAYPDIGSYVC---------------------RAEWTPAYSRSGKMSPPPGSVLVTLPGETRELHCEFG---QLSSPSVQWFFEGQPLERHPTLNASRRVYRMDRLRVSIVTLSGVEVGHGGTYECRINGQIKQTHVIVRVED-GLEVNPSEDT--VDEGTPVEFHCRAHGADQNVNREMQWFYQPFSGGPIQPVDLNPETGFVRQDHPYASHTSFISRLRARKSDEGIYICRLPSEGSEARGRLYVRSTVQYRVVITPPVLKVRVNNPIEFECYVVEDTGRQADVLPNFSVLDSRV----RFDQERVAANRVRFLIRSGLTSEYNGTQVRCAVEGTDRYATSIIVIEDTCPHGFRRCRSGDCLPAGRFCDGRRDCPDGSDEDPRLCNECEPTVKKCEYYQNRPPLKSTYMIHWKCDGEDDCGNGFDEANCPDPSIAQCGDYMFTCPNSQRRIPRSFVCDKDQDCEYGEDERNCVGPTI--ESIADYRHSVRAGTQVTLTCRVTGNPLPRVIWRFNWGCLPENDNRYRITNVAQNCDSPMPSVISTLTISNVRPGDDGIYNCEGLAGSMRAMSNDYFVMIEY 836
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Match: A0A4E0RPR1 (Basement membrane-specific heparan sulfate proteoglycan core protein OS=Fasciola hepatica OX=6192 GN=D915_000102 PE=4 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 2.792e-136 Identity = 277/812 (34.11%), Postives = 404/812 (49.75%), Query Frame = 2
Query: 473 SANYKYEWI--TPSGERQSSSS----FFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQV-----KALP----IMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTP-PLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSA--SKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDY--ARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGY-QTRNRDVIWSFLSKETGQI----TNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL--RIIVTPPIIKLRSGQTATFQCYVL-GAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR---KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG-NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLT-NERRMVVIESYRNCG----ATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNF 2794
S Y +WI P Q SS + E C+ TR+SD Q E +++ +LP + I + + + +C + ++ N+ F + WLD +++N L L L+D G YTC +S N + + ++ + ++ T V P E+ C V P P VTY Y NDR++ +R +P L ++G Y C +AE+ A ++S PPG + G+ RELHCE G L + W+F+GQ + + A + + RL VSI+ L ++ + G YECR+ G+ K+ ++IV + EV+PS+ T V +G PVEFHCR G Q NR++ W + G I N ++ + R D A TSFI +A D G+YIC P AR L V S + R+++TPP++K+R F+CYV+ GR D F R R E++ A +V+ R+ +T+ NGT+ C R +V+ D C G R CR+G+C+ + +FCDG+ DC DGSDED C +C+P K+CE Y P+ Y HW CDGEDDCGNG+DEA C ++ +CG + C + + IPR+F+CDKD DC G+DE C+ P I ES+ Y+ + R G V LTC+VTG PLP++IWRFNWGCL N+ R + +NC + +STLTIS +PGDDGIYNCE LSG RA S DY +++ +
Sbjct: 68 SHEYSVKWIRRLPDHSTQEVSSTAMLYIPEARAEEMQHPLYCQATRLSDGQTFEKALNIRMVGYGGASLPADLTLTIRSLPAEDLSTGRIMRQCLFEGNEEVNEQFD---FRWLDQNGRVVTNGDALYLMLEDPADLGNYTCEATHRS------SNNIYQAKYHVTRPSHAQASQYVVTVVPDAASQVLLGRPYEMLCRVEPMPSEPVTYRWYHNDRMVGSDARLRLPSLAYPDIGNYVC---------------------RAEWTPAYSRSGKMSPPPGSVLVTLPGETRELHCEFG---QLSSPSVQWFFEGQPLERHPTLNASRRVYRMDRLRVSIVTLSGVEVGHGGTYECRINGQIKQTHVIVRVED-GLEVNPSEDT--VDEGTPVEFHCRAHGADQNVNREMQWFYQPFSGGPIQPVDLNPETGFVRQDHPYASHTSFISRLRARKSDEGIYICRLPSEGSEARGRLYVRSTVQYRVVITPPVLKVRVNNPIEFECYVVEDTGRQADVLPNFSVLDSRI----RFDQERVAANRVRFLIRSGLTSEYNGTQVRCAVEGTDRYATSTIVIED-TCPHGFRRCRSGDCLPAGRFCDGRRDCPDGSDEDPRLCNECEPTVKKCEYYQNRPPLKSTYMIHWMCDGEDDCGNGFDEANCPDPSIAQCGDYMFTCPNSQRRIPRSFVCDKDQDCEYGEDERNCVGPTI--ESIADYRHSVRAGTQVILTCRVTGNPLPRVIWRFNWGCLPENDNRYRITNVAQNCDSPMPSVISTLTISNVRPGDDGIYNCEGLSGSMRAMSNDYFVMIEY 836
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 124.79 bits (312), Expect = 2.494e-28 Identity = 80/240 (33.33%), Postives = 114/240 (47.50%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC----FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN*GRRF 2815
C +C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C G+ C ++ C IP ++ CD++ DC + DE C P + DS + A RG TVT TC+ G P P I WR NWG + R+ + TLTI + + GD G Y CEA++ ++ +L RN G F
Sbjct: 191 CRGDQAMCQNGQCISRDYLCDGERDCTDGSDEMK--CGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCKDNSDEMDCPVRRPGDA--CAPEQFVCLSDRACIPASYQCDEEPDCADRSDEYGCAPPTVTSPPEDS--VTAMRGGTVTFTCKAVGVPTPIITWRLNWGHIPVSSRITMTSENGQ-----GTLTIRDVKEGDQGAYTCEAINAKGLVFAIPDGVLTLNRNAGPFF 412 HSP 2 Score: 55.4546 bits (132), Expect = 4.070e-7 Identity = 122/556 (21.94%), Postives = 195/556 (35.07%), Query Frame = 2
Query: 566 GQYTCRMTRISDNQVSEGKAFVQV---KALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKN--VRFFEPLELNCEVTPPLRDVTYE--------IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNI--QQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTRK----VGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANG-------GRAADTQRTTVEKLEAGKVQLTYRAVTTNDNG---------TRFTCRKGRSTAEVLVLVDP 2113
G Y C + N V +A ++V K + I+ + V GET++ C V + + +S +L + +I LR+ Q G Y CR++ P+V+ + + S S S P + V+ EP C V + V E I N ++ S TI N G Y+CV+ T +++ +I E A+ P GP + V+ GD L C+ G + W+ D AR + P S VL+ + + + G Y C + G T+ +++ P R+ V +G HC +GY + WS L I ++L +D+G YIC T+ AT++ VE+ + P + +R G+ QC L G P E+ G + D Q +AG TY+ V +N G R C + +A + V V P
Sbjct: 1871 GTYLC----VGTNAVGSSEARIEVTVVKGNDVSIQPSEASVVEGETLDLNCFVPGNPPPSVTWSRAN-GYLSPNHQVIGTQ--LRILRASQEDSGEYICRVD----GGPHVRQASVS------VSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCRVHSGAQPVRLEWKLTNNQPIPDNAKISPDGSVITITNAQSKNKGTYRCVASNPFGITQSIVS-----LIVRESPRATVT----PTGP-VHVKVGDPINLECQA---AGEPRPSVSWH-------RLDNARKTMLSSPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC--DGYGFPKPTISWSKLRAPLPWRHKIV-------------NGSLVLPSVGRQDSGQYICNVTNHMGTSEATIMLDVETTPYTTLLPDDVSVRVGEVIRLQC--LAHGTPPLRFEWSKVGGVLPATAEQQGGDLQINLASPDDAG----TYKCVASNKVGHSEAMAKVSVRLICNRVVCSAPLSVRVSP 2368
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 124.405 bits (311), Expect = 3.138e-28 Identity = 80/240 (33.33%), Postives = 114/240 (47.50%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC----FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN*GRRF 2815
C +C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C G+ C ++ C IP ++ CD++ DC + DE C P + DS + A RG TVT TC+ G P P I WR NWG + R+ + TLTI + + GD G Y CEA++ ++ +L RN G F
Sbjct: 191 CRGDQAMCQNGQCISRDYLCDGERDCTDGSDEMK--CGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCKDNSDEMDCPVRRPGDA--CAPEQFVCLSDRACIPASYQCDEEPDCADRSDEYGCAPPTVTSPPEDS--VTAMRGGTVTFTCKAVGVPTPIITWRLNWGHIPVSSRITMTSENGQ-----GTLTIRDVKEGDQGAYTCEAINAKGLVFAIPDGVLTLNRNAGPFF 412 HSP 2 Score: 53.1434 bits (126), Expect = 1.938e-6 Identity = 116/527 (22.01%), Postives = 186/527 (35.29%), Query Frame = 2
Query: 566 GQYTCRMTRISDNQVSEGKAFVQV---KALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKN--VRFFEPLELNCEVTPPLRDVTYE--------IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNI--QQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTRK----VGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANG-------GRAADTQRTTVEKLEAGKVQLTYRAVTTNDNG 2053
G Y C + N V +A ++V K + I+ + V GET++ C V + + +S +L + +I LR+ Q G Y CR++ P+V+ + + S S S P + V+ EP C V + V E I N ++ S TI N G Y+CV+ T +++ +I E A+ P GP + V+ GD L C+ G + W+ D AR + P S VL+ + + + G Y C + G T+ +++ P R+ V +G HC +GY + WS L I ++L +D+G YIC T+ AT++ VE+ + P + +R G+ QC L G P E+ G + D Q +AG TY+ V +N G
Sbjct: 1875 GTYLC----VGTNAVGSSEARIEVTVVKGNDVSIQPSEASVVEGETLDLNCFVPGNPPPSVTWSRAN-GYLSPNHQVIGTQ--LRILRASQEDSGEYICRVD----GGPHVRQASVS------VSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCRVHSGAQPVRLEWKLTNNQPIPDNAKISPDGSVITITNAQSKNKGTYRCVASNPFGITQSIVS-----LIVRESPRATVT----PTGP-VHVKVGDPINLECQA---AGEPRPSVSWH-------RLDNARKTMLSSPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC--DGYGFPKPTISWSKLRAPLPWRHKIV-------------NGSLVLPSVGRQDSGQYICNVTNHMGTSEATIMLDVETTPYTTLLPDDVSVRVGEVIRLQC--LAHGTPPLRFEWSKVGGVLPATAEQQGGDLQINLASPDDAG----TYKCVASNKVG 2343
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 123.635 bits (309), Expect = 6.280e-28 Identity = 75/216 (34.72%), Postives = 105/216 (48.61%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC----FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C +C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C G+ C ++ C IP ++ CD++ DC + DE C P + DS + A RG TVT TC+ G P P I WR NWG + R+ + TLTI + + GD G Y CEA+
Sbjct: 196 CRGDQAMCQNGQCISRDYLCDGERDCTDGSDEMK--CGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCKDNSDEMDCPVRRPGDA--CAPEQFVCLSDRACIPASYQCDEEPDCADRSDEYGCAPPTVTSPPEDS--VTAMRGGTVTFTCKAVGVPTPIITWRLNWGHIPVSSRITMTSENGQ-----GTLTIRDVKEGDQGAYTCEAI 393 HSP 2 Score: 53.9138 bits (128), Expect = 1.067e-6 Identity = 133/617 (21.56%), Postives = 211/617 (34.20%), Query Frame = 2
Query: 251 LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKD---------------KTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFT-------GQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV-----FGETVEFKCQVDKSKTDN------------KVFSSYTYSWLDSKNNIISNDQILRLKLD-DQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFF--EPLELNCEVTP-PLRDVTYE-----IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQI-------FVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTR-KVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDT--ARATLIVESDLRIIVTP------PIIKLRSGQTATFQC 1900
LTI N E G Y C S + + ++ L +Q + + G GS I P V C ASG A EW G+R SS++ + V FT G Y CR + +V ++P ++ V +P GET+ C+ + + + S+ + S + + +I L+ ++T FGT T +S Y+ + G S S P E L+LNC V P VT+ + N ++I R I R + + G Y C G +V QA + E S P I V+ G+ C V++G Q W ++ +N N ++ P S++ + N Q N+G Y C G T+ +++ +S V+P+ KVGD P+ C+ G V W L + + E + + + A +D+G Y+CT + T R +IVE + P P+ + G T T C
Sbjct: 1735 LTIQNVQPEDYGVYVCTGSNMFG--MDESSAVLHVQEANAEMFYTAYEMFEGHRQPGEGSQPVATIQPPVLTIQQGQRAEFRCT-ASGNPAP-AVEWTGGPGKRISSNAVIRGGV-LTFTSVDRSDEGDYICRALNTHGEHTARAVLYVHSTSVPYLLPHVQVSPQQVELHEGETLRLYCRAGGTPSPGLTWKKRGGTLPPQAIPSHGFHQFKSNSLDVLQRRIEELQARVERTDFGTLTVPNMKRSDGGTYL---CVGTNAVGSSEARIEVTVVKGNDVSIQPSEASVVEGETLDLNCFVPGNPPPSVTWSRANGYLSPNHQVIGTQLR--ILRASQEDSGEYICRVDG------------GPHVRQASVSVSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCR--VHSGAQPVRLEW-----KLTNNQPIPDNAKISPD--GSVITITNAQSKNKGTYRCVASNPFGITQSIVSLIVRESPRATVTPTGPVHVKVGD--PINLECQAAG--EPRPSVSWHRLDNARKTMLS--------SPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC 2308 HSP 3 Score: 53.5286 bits (127), Expect = 1.508e-6 Identity = 120/547 (21.94%), Postives = 192/547 (35.10%), Query Frame = 2
Query: 566 GQYTCRMTRISDNQVSEGKAFVQV---KALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKN--VRFFEPLELNCEVTPPLRDVTYE--------IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNI--QQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTRK----VGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANG-------GRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDP 2113
G Y C + N V +A ++V K + I+ + V GET++ C V + + +S +L + +I LR+ Q G Y CR++ P+V+ + + S S S P + V+ EP C V + V E I N ++ S TI N G Y+CV+ T +++ +I E A+ P GP + V+ GD L C+ G + W+ D AR + P S VL+ + + + G Y C + G T+ +++ P R+ V +G HC +GY + WS L I ++L +D+G YIC T+ AT++ VE+ + P + +R G+ QC L G P E+ G + D Q +AG TY+ V +N G K + + V V P
Sbjct: 1979 GTYLC----VGTNAVGSSEARIEVTVVKGNDVSIQPSEASVVEGETLDLNCFVPGNPPPSVTWSRAN-GYLSPNHQVIGTQ--LRILRASQEDSGEYICRVD----GGPHVRQASVS------VSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCRVHSGAQPVRLEWKLTNNQPIPDNAKISPDGSVITITNAQSKNKGTYRCVASNPFGITQSIVS-----LIVRESPRATVT----PTGP-VHVKVGDPINLECQA---AGEPRPSVSWH-------RLDNARKTMLSSPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC--DGYGFPKPTISWSKLRAPLPWRHKIV-------------NGSLVLPSVGRQDSGQYICNVTNHMGTSEATIMLDVETTPYTTLLPDDVSVRVGEVIRLQC--LAHGTPPLRFEWSKVGGVLPATAEQQGGDLQINLASPDDAG----TYKCVASNKVGHSEAMAKVSVRSPLSVRVSP 2467
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]) HSP 1 Score: 123.635 bits (309), Expect = 6.617e-28 Identity = 75/216 (34.72%), Postives = 105/216 (48.61%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC---RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC----FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEAL 2743
C +C+NG+CI+ CDG+ DC DGSDE + C C+P +C+ NG + W CDG++DC + DE C G+ C ++ C IP ++ CD++ DC + DE C P + DS + A RG TVT TC+ G P P I WR NWG + R+ + TLTI + + GD G Y CEA+
Sbjct: 196 CRGDQAMCQNGQCISRDYLCDGERDCTDGSDEMK--CGTPSPCEPNEFKCK--NGRCALK-----LWRCDGDNDCKDNSDEMDCPVRRPGDA--CAPEQFVCLSDRACIPASYQCDEEPDCADRSDEYGCAPPTVTSPPEDS--VTAMRGGTVTFTCKAVGVPTPIITWRLNWGHIPVSSRITMTSENGQ-----GTLTIRDVKEGDQGAYTCEAI 393 HSP 2 Score: 55.0694 bits (131), Expect = 5.578e-7 Identity = 129/602 (21.43%), Postives = 213/602 (35.38%), Query Frame = 2
Query: 251 LTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKD---------------KTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFT-------GQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV-----FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTP-PLRDVTYE-----IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQI-------FVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTR-KVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDT--ARATLIVESDLRIIVTP------PIIKLRSGQTATFQC 1900
LTI N E G Y C S + + ++ L +Q + + G GS I P V C ASG A EW G+R SS++ + V FT G Y CR + +V ++P ++ V +P GET+ C+ + + + + ++ L + ++ GTY C + T ++ + +V ++ N+ S + S +V E L+LNC V P VT+ + N ++I R I R + + G Y C G +V QA + E S P I V+ G+ C V++G Q W ++ +N N ++ P S++ + N Q N+G Y C G T+ +++ +S V+P+ KVGD P+ C+ G + V W L + + E + + + A +D+G Y+CT + T R +IVE + P P+ + G T T C
Sbjct: 1798 LTIQNVQPEDYGVYVCTGSNMFG--MDESSAVLHVQEANAEMFYTAYEMFEGHRQPGEGSQPVATIQPPVLTIQQGQRAEFRCT-ASGNPAP-AVEWTGGPGKRISSNAVIRGGV-LTFTSVDRSDEGDYICRALNTHGEHTARAVLYVHSTSVPYLLPHVQVSPQQVELHEGETLRLYCRAGGTPSPGLTWKKRGGTLPPQARVERTDFGTLTVPNMKRSDGGTYLC-VGTNAVGSSEARIEVTVVK-----------GNDVSIQPSE--ASVVEGETLDLNCFVPGNPPPSVTWSRANGYLSPNHQVIGTQLR--ILRASQEDSGEYICRVDG------------GPHVRQASVSVSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCR--VHSGAQPVRLEW-----KLTNNQPIPDNAKISPD--GSVITITNAQSKNKGTYRCVASNPFGITQSIVSLIVRESPRATVTPTGPVHVKVGD--PINLECQAAGEPRPS--VSWHRLDNARKTMLS--------SPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC 2345 HSP 3 Score: 53.5286 bits (127), Expect = 1.522e-6 Identity = 120/547 (21.94%), Postives = 192/547 (35.10%), Query Frame = 2
Query: 566 GQYTCRMTRISDNQVSEGKAFVQV---KALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKN--VRFFEPLELNCEVTPPLRDVTYE--------IYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNI--QQTNEGKYECRVR---GETKEAYIIVMAKSKNTEVSPSQQTRK----VGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLI--VESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANG-------GRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDP 2113
G Y C + N V +A ++V K + I+ + V GET++ C V + + +S +L + +I LR+ Q G Y CR++ P+V+ + + S S S P + V+ EP C V + V E I N ++ S TI N G Y+CV+ T +++ +I E A+ P GP + V+ GD L C+ G + W+ D AR + P S VL+ + + + G Y C + G T+ +++ P R+ V +G HC +GY + WS L I ++L +D+G YIC T+ AT++ VE+ + P + +R G+ QC L G P E+ G + D Q +AG TY+ V +N G K + + V V P
Sbjct: 2016 GTYLC----VGTNAVGSSEARIEVTVVKGNDVSIQPSEASVVEGETLDLNCFVPGNPPPSVTWSRAN-GYLSPNHQVIGTQ--LRILRASQEDSGEYICRVD----GGPHVRQASVS------VSVTSESSRLQSPIISIEPHSAAVKLGEPASFRCRVHSGAQPVRLEWKLTNNQPIPDNAKISPDGSVITITNAQSKNKGTYRCVASNPFGITQSIVS-----LIVRESPRATVT----PTGP-VHVKVGDPINLECQA---AGEPRPSVSWH-------RLDNARKTMLSSPVPMESNAVLQILVARAEDSGTYVCTAQNNQGTTETRIEVIVEGGPAVPTVPRASVREPMKVVVEGSTTTLHC--DGYGFPKPTISWSKLRAPLPWRHKIV-------------NGSLVLPSVGRQDSGQYICNVTNHMGTSEATIMLDVETTPYTTLLPDDVSVRVGEVIRLQC--LAHGTPPLRFEWSKVGGVLPATAEQQGGDLQINLASPDDAG----TYKCVASNKVGHSEAMAKVSVRSPLSVRVSP 2504
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Match: vldlr (very low density lipoprotein receptor [Source:NCBI gene;Acc:103023739]) HSP 1 Score: 86.6557 bits (213), Expect = 7.042e-17 Identity = 55/129 (42.64%), Postives = 70/129 (54.26%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
V +C+ +CRNG+CI CDG+PDC DGSDE E C R C C G P P++ W CDGE DC NG DE C GNV C L++ C G + I + F+C+ + DC +G DE C
Sbjct: 63 VRKMCAETDFVCRNGQCIPKRWHCDGEPDCEDGSDEGTEQCYTRTCRMNEFSCGV--GSTPCIPVF---WKCDGESDCDNGEDEMNC-GNVT-CALLEFTCTSG-RCISQNFVCNGEDDCGDGSDEQDC 183 HSP 2 Score: 62.3882 bits (150), Expect = 2.501e-9 Identity = 58/235 (24.68%), Postives = 83/235 (35.32%), Query Frame = 2
Query: 1901 YVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTL 2560
+ G G +P P F+ +G D +++ G V FTC GR ++ V C C N CI S CD PDC D SDE C + +C + W CDG+ DC +G DE C C +++C DG+ I + C+ DC +G DE C + + K R GE + +
Sbjct: 113 FSCGVGSTPCIPVFWKCDGESDCDNGE---DEMNCGNVTCAL---------LEFTCTSGRCISQNFVCNGEDDCGDGSDEQDCAPSSCGPNEFQCGNATCIPSGWVCDDDPDCQDHSDESPLRCGRNPTPPAKCSVSEILCGSGECIHRKWRCDGDADCKDGSDEKNCPAR--SCRPDQFKCEDGS-CIHGSRQCNGIRDCTDGTDEVNCKN---LTQCNGPDKFKCRSGECIDM 329 HSP 3 Score: 60.4622 bits (145), Expect = 8.304e-9 Identity = 44/121 (36.36%), Postives = 59/121 (48.76%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGL-KYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS LC +GECI+ CDG DC DGSDE R C P +CE + + C+G DC +G DE C N+ +C G K++C G + I +C+K DC + DE
Sbjct: 234 CSVSEILCGSGECIHRKWRCDGDADCKDGSDEKNCPARSCRPDQFKCEDGSCI-------HGSRQCNGIRDCTDGTDEVNC-KNLTQCNGPDKFKCRSG-ECIDMHKVCNKARDCPDWSDE 345
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Match: lrp1ab (low density lipoprotein receptor-related protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-030131-7126]) HSP 1 Score: 83.9593 bits (206), Expect = 1.544e-16 Identity = 61/195 (31.28%), Postives = 89/195 (45.64%), Query Frame = 2
Query: 1940 FFMANGGRAADTQRTTVEKLEAGK--VQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE-SRCIQPIIIQESL 2515
F++A+ GR + T + + ++ T +D G R + E D C G C+NG C N A CDG DC DGSDE C P +C T + P + C+G+D+CG+G DE C + C ++QC+ + IPR ++CD+D DC +G DE + C Q QE
Sbjct: 3290 FYLASDGRTCLSNCTASRFVCKNDKCIPFWWKCDTEDDCGDR--------SDEPADCPDFKCRPGQFQCKNGICTNPAFICDGDNDCGDGSDEANCDVHVCLPSQFKCRTTHRCIP------GIFRCNGQDNCGDGEDEKDC--PEVTCAPNQFQCSSTKRCIPRVWVCDRDNDCGDGSDEPANCTQMTCGQEEF 3468 HSP 2 Score: 72.4034 bits (176), Expect = 5.330e-13 Identity = 46/122 (37.70%), Postives = 56/122 (45.90%), Query Frame = 2
Query: 2111 PVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
P C G C+NG CI CDG DC D SDE E C Q S R + N N W CDG++DCGN DE+ C ++ C G IP ++ CD D DC + DE
Sbjct: 825 PQCHPGEFACKNGRCIQERWRCDGDNDCLDNSDEAPEICHQHTCPSDRFKCQN-----NRCIPLRWLCDGDNDCGNSEDESNTTCAARTCPPNQFSCASG-HCIPMSWKCDLDDDCGDRSDE 940 HSP 3 Score: 65.4698 bits (158), Expect = 6.933e-11 Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSK-RCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE------CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C NG CIN CD DCAD SDE C +S+ +C + + +HW CDG++DCG+ DE L C G ++QC + IP + CD DTDC++ DE C
Sbjct: 957 CNNGRCINMNWRCDADNDCADASDEIG--CNHSCSISQFKCNSGRCIP-------SHWTCDGDNDCGDFSDETNPNCTKLATRPPGGCHGDEFQCKADGQCIPLRWRCDGDTDCIDTSDEKEC 1070 HSP 4 Score: 64.3142 bits (155), Expect = 1.456e-10 Identity = 42/126 (33.33%), Postives = 55/126 (43.65%), Query Frame = 2
Query: 2108 DPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
D C C+N C+ CD DC D SDE+ R C C +A W CDG+ DC +G DE C C ++QC +G IP+ + CD D DC++G DE C
Sbjct: 3502 DRTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEEGCTPRPCSESEFSCANGRCIA-------GRWRCDGDHDCSDGSDEKDC---SPRCDHDQFQCRNG-HCIPQRWRCDADIDCIDGSDEDNC 3616 HSP 5 Score: 64.3142 bits (155), Expect = 1.532e-10 Identity = 50/167 (29.94%), Postives = 68/167 (40.72%), Query Frame = 2
Query: 2054 TRFTCRKGR--------------STAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--------CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECG-GLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
T+F C GR + A + + CS C +G CI S CDG DC D SDE C + C +C+ P+ W CDG+ DC + DE +C G V C L++ C D + I + + CD D DC + DE C
Sbjct: 953 TQFACNNGRCINMNWRCDADNDCADASDEIGCNHSCSISQFKCNSGRCIPSHWTCDGDNDCGDFSDETNPNCTKLATRPPGGCHGDEFQCKADGQCIPL------RWRCDGDTDCIDTSDEKECDGVVRTCDPTLQFSCRDTGRCISKTWFCDGDNDCEDNSDEEGC 1113 HSP 6 Score: 63.929 bits (154), Expect = 2.336e-10 Identity = 43/121 (35.54%), Postives = 56/121 (46.28%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDES 2479
CS C NG CI CDG DC+DGSDE + C P RC+ W CD + DC +G DE C V C ++QCN+ T P ++ CD + DC + DE+
Sbjct: 3544 CSESEFSCANGRCIAGRWRCDGDHDCSDGSDE-----KDCSP---RCDHDQFQCRNGHCIPQRWRCDADIDCIDGSDEDNCAAIVRTCPHHEFQCNN-TLCKPLSWKCDGEDDCGDNSDET 3655 HSP 7 Score: 62.7734 bits (151), Expect = 4.180e-10 Identity = 42/129 (32.56%), Postives = 54/129 (41.86%), Query Frame = 2
Query: 2111 PVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLEC-GGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
P C CRNG CI CD DC DGSDED C + + C + W CDGEDDCG+ DE +C G +++C + CD +C +G DE C +P
Sbjct: 3580 PRCDHDQFQCRNGHCIPQRWRCDADIDCIDGSDED-----NCAAIVRTCPHHEFQCNNTLCKPLSWKCDGEDDCGDNSDETPEMCLKFQCPPGRQFRCRNNRVCFWAGRQCDGVDNCGDGSDEENCEKP 3703 HSP 8 Score: 51.9878 bits (123), Expect = 1.019e-6 Identity = 40/118 (33.90%), Postives = 54/118 (45.76%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C NG+CI CDG DC D SDE +C RQC C + + C+G +DCG+ DE C N CG +++C DG+ I C++ DC + DE C
Sbjct: 2509 CNNGDCIRYHLTCDGVADCKDKSDEKPFYCTSRQCKNGYVNCLNGRCMETLK-------LCNGVNDCGDNSDEIAC--NNSTCGADEFRCGDGS-CIANVTRCNQVVDCDDISDEIGC 2616 HSP 9 Score: 51.2174 bits (121), Expect = 1.704e-6 Identity = 36/108 (33.33%), Postives = 51/108 (47.22%), Query Frame = 2
Query: 2153 CINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
C+ A CDG DC D +DE C++ S C P P W CD E DC +G DE C + C ++C++G K I + ++CD + DC + DE
Sbjct: 2643 CVLPAWICDGANDCGDYADEKN--CKK-KSGSPGCSPDYFNCPSGPCIPTAWKCDREPDCDDGADELNC---DMLCAVDHFECDNG-KCITKRWMCDGEDDCGDRSDE 2743 HSP 10 Score: 50.8322 bits (120), Expect = 2.017e-6 Identity = 42/153 (27.45%), Postives = 65/153 (42.48%), Query Frame = 2
Query: 2144 NGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVA--PINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQC-NDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPK 2593
+G+CI CDG DC D SDE ++CD + + C+ + W CDG++DC + DE C + C + C ND + + +CD +DC +G DE + ++ GE V +C +G L K
Sbjct: 1045 DGQCIPLRWRCDGDTDCIDTSDE-----KECDGVVRTCDPTLQFSCRDTGRCISKTWFCDGDNDCEDNSDEEGC--ETMLCKPPSHSCANDSSICLSPKKLCDGHSDCPDGSDEGMLCDQCQVNNGGCTHNCTVAPGEGVVCSCP-SGMQLGK 1189 HSP 11 Score: 50.447 bits (119), Expect = 2.469e-6 Identity = 34/95 (35.79%), Postives = 41/95 (43.16%), Query Frame = 2
Query: 2111 PVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKY 2395
P CS C +G CI +A CD +PDC DG+DE CD L C + W CDGEDDCG+ DE C + Y
Sbjct: 2672 PGCSPDYFNCPSGPCIPTAWKCDREPDCDDGADE-----LNCDML---CAVDHFECDNGKCITKRWMCDGEDDCGDRSDEKDAHCTFRACANIAY 2758 HSP 12 Score: 50.447 bits (119), Expect = 2.802e-6 Identity = 51/186 (27.42%), Postives = 67/186 (36.02%), Query Frame = 2
Query: 2072 KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDE---------DQEF-------------CRQ---CDPLSKRCETYNGVAPINPIYQAH---------------------WACDGEDDCGNGYDEAKCF--GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
K +S + C +G C NG C+ + K C+G DC D SDE EF C Q CD +S G P+N + W CDG +DCG+ DE C C + C G IP A+ CD++ DC +G DE C
Sbjct: 2528 KDKSDEKPFYCTSRQCKNGYVNCLNGRCMETLKLCNGVNDCGDNSDEIACNNSTCGADEFRCGDGSCIANVTRCNQVVDCDDISDEI----GCGPMNCTHYHRLGVQASGYVSCNSTSLCVLPAWICDGANDCGDYADEKNCKKKSGSPGCSPDYFNCPSG-PCIPTAWKCDREPDCDDGADELNC 2708 HSP 13 Score: 50.447 bits (119), Expect = 2.947e-6 Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 2
Query: 2114 VCSSGSRLCRNG-ECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEA 2353
CS +C++G CI+ CDG+ DC DGSDE E C++ + + + Y+ + I+ + CDG +DC +GYDE
Sbjct: 4 TCSPTQFVCKDGLTCISLGWRCDGEKDCPDGSDESPEICQKPNEMKCQVNHYHCLGTELCIHMSK-LCDGNNDCPDGYDEG 83
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001137.1 (pep scaffold:Pmarinus_7.0:GL476464:95621:179961:-1 gene:ENSPMAG00000001008.1 transcript:ENSPMAT00000001137.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 68.1662 bits (165), Expect = 8.874e-12 Identity = 45/118 (38.14%), Postives = 57/118 (48.31%), Query Frame = 2
Query: 2153 CINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCV-NGDDESRCIQPIII 2503
CI CDG DC DGSDE E C+Q +S R + N N W CDG++DCG DE+ V C ++ C +G K IP A+ CD D DC N D+ C P +
Sbjct: 1 CIQDQWRCDGDNDCQDGSDELPEICQQHTCISDRFKCKN-----NRCIPMRWLCDGDNDCGENEDESNTTCTVRTCPAEQFTCGNG-KCIPIAWKCDLDNDCSDNSDEPPSCAYPTCL 112 HSP 2 Score: 67.781 bits (164), Expect = 1.288e-11 Identity = 47/131 (35.88%), Postives = 59/131 (45.04%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQ--EF----CRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECG-GLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+ C+NG CI S CDG DC D SDE EF RQC RC P+ W CDG+ DC + DE +C G C G + C I +A++CD D DC + DE+ C
Sbjct: 149 TCADSQFSCKNGHCIPSQWVCDGDNDCGDVSDETHTCEFPARPLRQCREDEFRCAINGNCIPL------RWRCDGDADCMDISDEKECDGQRRTCNPGTHFTCVSNGICIRKAWVCDGDNDCEDNSDEAGC 273 HSP 3 Score: 66.6254 bits (161), Expect = 2.687e-11 Identity = 44/126 (34.92%), Postives = 56/126 (44.44%), Query Frame = 2
Query: 2108 DPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
D C C+N CI CD DC D SDE+ R C C +A W CDG+ DC +G DE C L C ++QC +G IP+ + CD D DC++G DE C
Sbjct: 873 DKTCEPYQFRCKNNRCIPGRWHCDYDNDCGDNSDEEGCTPRPCSESEFSCANGRCIA-------GRWRCDGDHDCMDGSDEKDC---SLRCEQDQFQCQNG-HCIPQRWRCDNDADCLDGSDEENC 987 HSP 4 Score: 60.4622 bits (145), Expect = 2.058e-9 Identity = 43/120 (35.83%), Postives = 51/120 (42.50%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS C NG CI CDG DC DGSDE S RCE W CD + DC +G DE C V C ++QCN T P ++ CD + DC + DE
Sbjct: 915 CSESEFSCANGRCIAGRWRCDGDHDCMDGSDEKD--------CSLRCEQDQFQCQNGHCIPQRWRCDNDADCLDGSDEENCGSAVRLCPKDEFQCN-STLCKPFSWRCDGEDDCGDNSDE 1025 HSP 5 Score: 53.9138 bits (128), Expect = 2.461e-7 Identity = 39/120 (32.50%), Postives = 52/120 (43.33%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLK-YQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
C+NG CI CD DC DGSDE E C L + E P W CDGEDDCG+ DE +C + ++C + + +CD +C + DE C +P
Sbjct: 960 CQNGHCIPQRWRCDNDADCLDGSDE--ENCGSAVRLCPKDEFQCNSTLCKPF---SWRCDGEDDCGDNSDEDADHCRAFQCPPRRQFRCRNDRVCVSLDRVCDGINNCGDHSDEEHCGEP 1074 HSP 6 Score: 50.447 bits (119), Expect = 2.451e-6 Identity = 41/159 (25.79%), Postives = 61/159 (38.36%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR--------------QCDPLSKRCETYNGVAPIN------------PIYQ----------AHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESR 2482
C S C+N CI CDG DC + DE C +C P++ +C+ N + + P+ Q W CD ++DC + DEA C C ++ C +G IP ++CD D DC + DE+
Sbjct: 29 TCISDRFKCKNNRCIPMRWLCDGDNDCGENEDESNTTCTVRTCPAEQFTCGNGKCIPIAWKCDLDNDCSDNSDEPPSCAYPTCLPLTQFSCNNGRCINIRWRCDSDNDCADSSDEAGCNNT---CADSQFSCKNG-HCIPSQWVCDGDNDCGDVSDETH 183
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Match: sorl1 (sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]) HSP 1 Score: 66.6254 bits (161), Expect = 2.434e-11 Identity = 52/141 (36.88%), Postives = 64/141 (45.39%), Query Frame = 2
Query: 2120 SSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCD--PLSKRCETYNGVAPIN-----------PIYQAHWACDGEDDCGNGYDEAKC----FGNVLECGGL--KYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
S G C +G CI CDG DC DG+DE Q QC P + C + PIN HW CDG DDCG+ DEA C V+ C + +++C DGT I F+CD DC +G DE C
Sbjct: 1049 SQGMECCPSGPCIPRRWLCDGDKDCLDGADEQQ----QCGTRPPAMWCSMLH--QPINCTSSEFQCRSGVCISLHWKCDGVDDCGDYSDEANCREMPSPEVVCCTVMIGEFRCGDGT-CIFDHFVCDGSPDCADGSDEYGC 1182 HSP 2 Score: 59.6918 bits (143), Expect = 3.838e-9 Identity = 46/141 (32.62%), Postives = 62/141 (43.97%), Query Frame = 2
Query: 2099 VLVDPV-CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--------CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC---FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
+L P+ C+S CR+G CI+ CDG DC D SDE CR+ C + +G + H+ CDG DC +G DE C G C ++QC +P + CD DCV+G DE C
Sbjct: 1094 MLHQPINCTSSEFQCRSGVCISLHWKCDGVDDCGDYSDEAN--CREMPSPEVVCCTVMIGEFRCGDGTCIFD-----HFVCDGSPDCADGSDEYGCPTQHGRPSPCSFTQFQCLKDKTCVPASARCDGRKDCVDGSDELGC 1227 HSP 3 Score: 58.151 bits (139), Expect = 1.185e-8 Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDG-KPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNV-LECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESR 2482
VC+ C NG CIN CD + DC D SDE + Q +C+ ++ W CDG++DC + DE C + +EC C G IPR ++CD D DC++G DE +
Sbjct: 970 VCAESQFKCANGRCINILWKCDHDEDDCGDNSDEPADCPHQ------KCQATEFSCSNGRCVRSAWRCDGDNDCHDWSDEVNCSSSQGMEC------CPSG-PCIPRRWLCDGDKDCLDGADEQQ 1081 HSP 4 Score: 53.1434 bits (126), Expect = 3.819e-7 Identity = 41/130 (31.54%), Postives = 53/130 (40.77%), Query Frame = 2
Query: 2126 GSRLCRNGECINSAKFCDGKPDCADGSDE-----DQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE--------CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
G C +G CI CDG PDCADGSDE C +C P A CDG DC +G DE C+ + + CG ++ C DG+ + +CD DC + DE
Sbjct: 1151 GEFRCGDGTCIFDHFVCDGSPDCADGSDEYGCPTQHGRPSPCSFTQFQCLKDKTCVP------ASARCDGRKDCVDGSDELGCYDSGSQLCYSMPGVCGENQFACVDGSGCLEHFMLCDGYHDCQDRSDE 1274
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Match: lrp2a (low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]) HSP 1 Score: 67.0106 bits (162), Expect = 2.565e-11 Identity = 52/155 (33.55%), Postives = 69/155 (44.52%), Query Frame = 2
Query: 2111 PVCSSGSRL-CRNGECINSAKFCDGKPDCADGSDE-----DQEFC---------RQCDPLSKR--------------CETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI 2488
P CSS C NG C+ CDG DC DGSDE C R+C P+ R C + N P +W CD ++DCG+G DE C C +++QC D + I A++CD D+DCV+G DE C+
Sbjct: 1000 PQCSSTEFFACANGRCVPRLFLCDGYDDCHDGSDERGCGTGNVTCSPYAFTCTNRRCIPIDWRPTRLATTCRADQFTCASGNRCIP------RYWICDTDNDCGDGSDERGC-DMSGTCHPMQFQCPD-HRCIDNAYVCDGDSDCVDGADERGCV 1146 HSP 2 Score: 60.8474 bits (146), Expect = 1.893e-9 Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE-AKCFGNVLECGGLKYQCNDGT----KSIPRAFICDKDTDCVNGDDESR 2482
C NG+CI + CD + DC D +DE C + C W CDG++DCG+G DE + CG ++ C D + + I R F+CD D DC + DE +
Sbjct: 2833 CGNGQCIPLSWVCDSEQDCTDNADEPSS----CSDPGRTCPGTQFTCDSGRCIPGSWICDGDNDCGDGSDEDGRHACGARTCGPHEFTCADASPPRRRCIQRRFVCDGDADCSDALDEHQ 2948 HSP 3 Score: 60.077 bits (144), Expect = 2.886e-9 Identity = 42/137 (30.66%), Postives = 57/137 (41.61%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEF---CRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESL 2515
C C +G CI + CDG DC DGSDED R C P C + P Q + CDG+ DC + DE + C ++ C++G + + CD+ DC +G DE C P Q
Sbjct: 2867 TCPGTQFTCDSGRCIPGSWICDGDNDCGDGSDEDGRHACGARTCGPHEFTCA--DASPPRRRCIQRRFVCDGDADCSDALDEHQ-NCTRRSCTAGEFACDNGL-CVHSRYRCDRRNDCGDGSDERGCTYPTCRQNQF 2999 HSP 4 Score: 59.3066 bits (142), Expect = 5.665e-9 Identity = 60/201 (29.85%), Postives = 76/201 (37.81%), Query Frame = 2
Query: 2057 RFTCRKGRSTA-----------------EVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC--RQCDP------------------------------------LSKRCETYNGVA-PINPIYQAHWA-CDGEDDCGNGYDEAKCFGNVLECGGL-KYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
RF CR G T+ E + + C+S C N CI +A CDG PDC DGSDED C R C P S RC+++ A N WA C+G DDC + DE C + C L Y+C D + IP + CD+ DC +G DE C
Sbjct: 3522 RFQCRDGNCTSSNLLCNGNNNCPDGSDEEDTLCFNHRCNSNQWQCMNKRCIPAAWLCDGGPDCQDGSDEDSATCAARTCAPGQFRCNNGRCIPRSWVCDVDDDCGDGSDEPHDTCMGPSHRCDSHTEFACRTNYRCIPTWAVCNGMDDCRDNSDEQGC--AEITCDPLGDYRC-DNHRCIPLRWRCDRYDDCGDGSDERNC 3719 HSP 5 Score: 59.3066 bits (142), Expect = 5.810e-9 Identity = 41/125 (32.80%), Postives = 59/125 (47.20%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAK--CFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C++G C NG C++S CD + DC DGSDE C CE + I +ACDG++DCG+G DE C C ++C G + + +C++ DC +G DE C
Sbjct: 2955 CTAGEFACDNGLCVHSRYRCDRRNDCGDGSDERGCTYPTCRQNQFTCENGRCIPRI-------FACDGDNDCGDGSDEDTHLCHQPSPTCAPGFFRCGAG-ECVAIHLVCNQANDCADGSDEKGC 3071 HSP 6 Score: 58.9214 bits (141), Expect = 7.295e-9 Identity = 57/174 (32.76%), Postives = 72/174 (41.38%), Query Frame = 2
Query: 2051 GTRFTCRKGRSTAEVLVL-VDPVCSSGS----------RLCRNGE------------CINSAKFCDGKPDCADGSDEDQEFCRQ-CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESR--CIQP 2494
GT+FTC GR + D C GS R C E CI CDG DC+D DE Q R+ C C+ NG+ + + CD +DCG+G DE C C ++ C +G + IPR F CD D DC +G DE C QP
Sbjct: 2870 GTQFTCDSGRCIPGSWICDGDNDCGDGSDEDGRHACGARTCGPHEFTCADASPPRRRCIQRRFVCDGDADCSDALDEHQNCTRRSCTAGEFACD--NGLC-----VHSRYRCDRRNDCGDGSDERGC--TYPTCRQNQFTCENG-RCIPRIFACDGDNDCGDGSDEDTHLCHQP 3033 HSP 7 Score: 58.5362 bits (140), Expect = 8.932e-9 Identity = 42/124 (33.87%), Postives = 55/124 (44.35%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+SG+R CI CD DC DGSDE R CD +S C P + + CDG+ DC +G DE C V C ++ C+ G + I + CD DC + DE C
Sbjct: 1076 TCASGNR------CIPRYWICDTDNDCGDGSDE-----RGCD-MSGTCHPMQFQCPDHRCIDNAYVCDGDSDCVDGADERGC---VFNCTSYQFSCSSGDQCIATYYRCDGAFDCRDRSDEVGC 1184 HSP 8 Score: 58.5362 bits (140), Expect = 1.031e-8 Identity = 45/131 (34.35%), Postives = 62/131 (47.33%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSK-RCETYNGVAPINPIYQAHWACDGEDDCGNGYDEA--KCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQ 2491
C S C N CI + CDG DC DGSDE+ C C+P + RC+ N +H C+ DDCG+G DE KC C +++C G + IP A +C+ +C + DE+ C Q
Sbjct: 3807 CPPSSFECDNHVCIPPSWKCDGDNDCGDGSDEELHHCLDTPCNPPGRFRCDN-------NRCIYSHEICNAVDDCGDGSDETPDKCKEPTFAPCTEEEFKCASG-RCIPMAAVCNNYNECRDNTDETGCNQ 3929 HSP 9 Score: 58.151 bits (139), Expect = 1.327e-8 Identity = 46/144 (31.94%), Postives = 62/144 (43.06%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVLVDPVCSSGSRLCR-NGECINSAKFCDGKPDCADGSDEDQEFC--RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLEC-GGLKYQCNDGTKSIPRAFICDKDTDCVNGDDES 2479
F CR +C + C+ +G CI + CDG PDC DGSDE C R C RC+ N V W CDG++DC +G DE C C ++ C + + +CD + DC +G DES
Sbjct: 1173 FDCRDRSDEVGCPTRAPGLCHNDEFQCQSDGLCIPAGWECDGHPDCDDGSDE-HPGCPPRTCAAGYLRCDNGNCVP-------ESWRCDGDNDCRDGTDERDCPTPPYRCQSPSQWLCPNHRACVDLRKVCDGNFDCPDGGDES 1308 HSP 10 Score: 56.6102 bits (135), Expect = 4.074e-8 Identity = 43/129 (33.33%), Postives = 52/129 (40.31%), Query Frame = 2
Query: 2099 VLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
+ DP+ G C N CI CD DC DGSDE R C RC + W C+ E+DCG+ DE C + C +QC G IP CD DC + DES C
Sbjct: 3682 ITCDPL---GDYRCDNHRCIPLRWRCDRYDDCGDGSDERNCAPRPCSESEFRCTNQRCIP-------GRWVCNHENDCGDNSDERDC--ELQTCLPGYFQCGSG-HCIPERLKCDGSADCQDFSDESLC 3797 HSP 11 Score: 55.0694 bits (131), Expect = 1.021e-7 Identity = 34/87 (39.08%), Postives = 37/87 (42.53%), Query Frame = 2
Query: 2111 PVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ----CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC 2359
P C C NG CI CDG DC DGSDED C Q C P RC VA H C+ +DC +G DE C
Sbjct: 2992 PTCRQNQFTCENGRCIPRIFACDGDNDCGDGSDEDTHLCHQPSPTCAPGFFRCGAGECVA-------IHLVCNQANDCADGSDEKGC 3071 HSP 12 Score: 53.5286 bits (127), Expect = 2.880e-7 Identity = 45/127 (35.43%), Postives = 57/127 (44.88%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAK-CFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
C SG C +G CI + CD DC+D SDE C L RC + N I +A + CDGE DC + DE + C G+ C + C G + AF CD DC + DE C P
Sbjct: 1 CDSGQFRCGSGACIPRSWVCDSINDCSDDSDERGCSPATCTTLQFRCRSDNRC-----IARA-FVCDGEADCADRSDEHQNCPGST--CSSSHFTCASG-HCVQSAFRCDHFQDCDDRSDEQSCQYP 118 HSP 13 Score: 51.2174 bits (121), Expect = 1.691e-6 Identity = 45/131 (34.35%), Postives = 60/131 (45.80%), Query Frame = 2
Query: 2117 CSSGSRLCRNG-ECINSAKFCDGKPDCADGSDEDQEFCRQ---CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAK-CFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
C+S C +G +CI + CDG DC D SDE R C +C++ P A W CDG DC +G DE C G L+ C++G +P ++ CD D DC +G DE C P
Sbjct: 1149 CTSYQFSCSSGDQCIATYYRCDGAFDCRDRSDEVGCPTRAPGLCHNDEFQCQSDGLCIP------AGWECDGHPDCDDGSDEHPGCPPRTCAAGYLR--CDNG-NCVPESWRCDGDNDCRDGTDERDCPTP 1270 HSP 14 Score: 49.6766 bits (117), Expect = 5.144e-6 Identity = 37/115 (32.17%), Postives = 51/115 (44.35%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYN-GVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE-CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
C + CI++A CDG DC DG+DE R C C +Y + + ++ CDG DC + DE C C ++QC IP + CD DC +G DE
Sbjct: 1118 CPDHRCIDNAYVCDGDSDCVDGADE-----RGC---VFNCTSYQFSCSSGDQCIATYYRCDGAFDCRDRSDEVGCPTRAPGLCHNDEFQCQSDGLCIPAGWECDGHPDCDDGSDE 1224
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Match: sorl1 (sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]) HSP 1 Score: 65.0846 bits (157), Expect = 8.317e-11 Identity = 44/139 (31.65%), Postives = 59/139 (42.45%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQE----FCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGG------------LKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS+ C +G CI CDG DC DG+DE Q+ Q P C + HW CDG DDCG+ DEA C + + C ++QC + + +P + CD D DC + DE C
Sbjct: 744 CSADGFQCPSGPCIPRRWLCDGDKDCLDGADEQQQCGGLVPPQPTPGHLNCTSSEFQCRSGVCISLHWKCDGVDDCGDYSDEANCRASCIICWSSGPTVAPRCLPLFQFQCRN-HRCVPVWWKCDNDNDCGDWSDEDTC 881 HSP 2 Score: 62.003 bits (149), Expect = 6.237e-10 Identity = 48/140 (34.29%), Postives = 66/140 (47.14%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR---------------QCDPLSK-RCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE-CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+S CR+G CI+ CDG DC D SDE CR +C PL + +C + V P++ W CD ++DCG+ DE C + C +++C DGT I F+CD DC +G DE C
Sbjct: 794 CTSSEFQCRSGVCISLHWKCDGVDDCGDYSDEAN--CRASCIICWSSGPTVAPRCLPLFQFQCRNHRCV----PVW---WKCDNDNDCGDWSDEDTCPSKLPSGCPAHQFRCGDGT-CIFDHFVCDGSPDCADGSDEYGC 923 HSP 3 Score: 61.2326 bits (147), Expect = 1.200e-9 Identity = 49/164 (29.88%), Postives = 73/164 (44.51%), Query Frame = 2
Query: 2117 CSSGSRLCRN-GECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF---GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI------QPIIIQESLDSYKINARRGETVTLTCQVTG 2578
C + C+N G CI + CD + DC D SDE + Q +C+ ++ W CDG++DC + DE C GN+ C +QC G IPR ++CD D DC++G DE + QP + S + R G ++L + G
Sbjct: 660 CGTNQFRCQNSGRCIPMSYKCDQEDDCGDNSDEPADCPHQ------KCQATEFSCSNGRCVRSAWRCDGDNDCHDWSDEVNCSSSQGNI-SCSADGFQCPSG-PCIPRRWLCDGDKDCLDGADEQQQCGGLVPPQPTPGHLNCTSSEFQCRSGVCISLHWKCDG 815 HSP 4 Score: 57.3806 bits (137), Expect = 1.588e-8 Identity = 47/138 (34.06%), Postives = 58/138 (42.03%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE-AKCFGNV--------LECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIII 2503
C + C NG C+ SA CDG DC D SDE Q + C P P W CDG+ DC +G DE +C G V L C ++QC G I + CD DC + DE+ C II
Sbjct: 701 CQATEFSCSNGRCVRSAWRCDGDNDCHDWSDEVNCSSSQGN---ISCSADGFQCPSGPCIPRRWLCDGDKDCLDGADEQQQCGGLVPPQPTPGHLNCTSSEFQCRSGV-CISLHWKCDGVDDCGDYSDEANCRASCII 834 HSP 5 Score: 52.7582 bits (125), Expect = 4.039e-7 Identity = 40/123 (32.52%), Postives = 51/123 (41.46%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDED---QEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC-------FGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CRN C+ CD DC D SDED + C RC +G + H+ CDG DC +G DE C G C ++QC +P + CD DCV+G DE
Sbjct: 854 CRNHRCVPVWWKCDNDNDCGDWSDEDTCPSKLPSGCPAHQFRCG--DGTCIFD-----HFVCDGSPDCADGSDEYGCPTQHAVITGRPSPCSFTQFQCLKDKTCVPASARCDGRKDCVDGSDE 969
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Match: EDO45218 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTH9]) HSP 1 Score: 77.7962 bits (190), Expect = 2.170e-14 Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 2
Query: 2045 DNGTRFTCRKGRSTAEVLVLVDP------VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
D +RFT + G + L + C+ G C NG+CI S+ CD DC D SDE+ C+P +C+ ++ + W CD ++DCG+ DE C G C +++C +G K IP ++ CD D DC + DE+ C
Sbjct: 920 DGSSRFTIKSGLTGVMDLKVFHQDAQTAGTCAPGQFKCGNGKCIPSSWKCDHDNDCGDNSDENNCPYSTCNPSQFKCDNGRCIS-------SKWRCDHDNDCGDMSDERNCTGT---CAPGQFKCGNG-KCIPSSWKCDHDNDCGDNSDENNC 1061 HSP 2 Score: 67.781 bits (164), Expect = 2.043e-11 Identity = 41/126 (32.54%), Postives = 56/126 (44.44%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
C+S C N CI CD DC D SDE R C P C + W CD ++DC + DE C C ++ C++G + I R+++CD+D DC +G DE C P
Sbjct: 1105 CASNYFRCANQRCIPMRWVCDFDNDCRDNSDE-----RDCTPTFSTCASNYFRCANQRCIPMRWVCDFDNDCRDNSDERDCTPTGRSCNSGQFSCSNG-RCISRSWVCDRDNDCGDGSDERNCSYP 1224 HSP 3 Score: 67.781 bits (164), Expect = 2.149e-11 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C+ G C NG+CI S+ CD DC D SDE+ C+P +C+ ++ + W CD ++DCG+ DE C C ++C + + IP ++CD D DC + DE C
Sbjct: 1027 CAPGQFKCGNGKCIPSSWKCDHDNDCGDNSDENNCPYSTCNPSQFKCDNGRCIS-------SKWRCDHDNDCGDMSDERNC--TFSTCASNYFRCAN-QRCIPMRWVCDFDNDCRDNSDERDC 1139 HSP 4 Score: 57.3806 bits (137), Expect = 3.860e-8 Identity = 45/148 (30.41%), Postives = 59/148 (39.86%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAH-W--------------ACDGEDDCGNGYDEAKCFGNVL-----ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPII 2500
C+SG C NG CI+ + CD DC DGSDE P + R P PI+ W CDG DDCG+ DE C C ++QC + + + + CD DC + DE+ C P I
Sbjct: 1187 CNSGQFSCSNGRCISRSWVCDRDNDCGDGSDERNCSYPTTGPWTTR--------PWTPIFSCRSWEFSCLNGRCVFYRLVCDGVDDCGDSSDEMSCNATATPFVPRSCHYWEFQCAN-RRCVYNSQRCDGQNDCGDWSDETGCSTPPI 1325 HSP 5 Score: 56.6102 bits (135), Expect = 6.094e-8 Identity = 32/120 (26.67%), Postives = 51/120 (42.50%), Query Frame = 2
Query: 2144 NGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIII 2503
+G CI+++ C+G+ DC D DE CR ++ C + + CDG C +G DE C + + C+ T +P CD DC + DE C P+++
Sbjct: 1341 SGLCISTSWLCNGRVDCPDAWDEQPAQCRTSPAPTRTCSPQEYQCDNGACIPSRYECDGRIQCSDGSDETGCTATISPSSCPGFLCDGNTLCLPFYKRCDGSYDCKDYTDEFNCSMPLMV 1460
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Match: EDO49498 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGB0]) HSP 1 Score: 72.7886 bits (177), Expect = 4.620e-13 Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
C+ C NG+CI+ A CDG DCAD SDE + C P C NG I Q W CDGE+DCG+ DE C + CG +++C++ ++ I ++ +CD DC + DE
Sbjct: 164 CTDSQFSCSNGQCISLAWRCDGDHDCADKSDERNCTGKTCKPFEFACA--NGRHCI----QRKWICDGENDCGDRSDEVDC--GLESCGNDRWRCSNTSRCIAKSQVCDGRVDCPDASDE 275 HSP 2 Score: 70.8626 bits (172), Expect = 1.706e-12 Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQ------------EF----CRQCDPLSKRCE-TYNGVAP--------------INPIYQA--------HWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS+G C+NG CI+ CDG+ DC D SDED+ EF R+C PLS RC+ Y+ +AP +++ W CDG DDCG+G DE C + C ++ C G + IP + CD D DC +G DE C
Sbjct: 1 CSAGKFTCKNGHCISLRWKCDGENDCVDNSDEDEYAGCAEWSCRASEFRCQASRKCIPLSWRCDGDYDCLAPDLSDEANCSVATNCSASMFRCANGQCKPRDWVCDGFDDCGDGSDEKGCANH--SCTPAQFSCPSG-RCIPLRWRCDGDGDCSDGADERGC 159 HSP 3 Score: 60.4622 bits (145), Expect = 2.685e-9 Identity = 43/123 (34.96%), Postives = 54/123 (43.90%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS+ C NG+C CDG DC DGSDE C P C P W CDG+ DC +G DE C C ++ C++G + I A+ CD D DC + DE C
Sbjct: 86 CSASMFRCANGQCKPRDWVCDGFDDCGDGSDEKGCANHSCTPAQFSC-------PSGRCIPLRWRCDGDGDCSDGADERGCPPK--NCTDSQFSCSNG-QCISLAWRCDGDHDCADKSDERNC 198
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Match: EDO40539 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6X5]) HSP 1 Score: 66.2402 bits (160), Expect = 2.062e-12 Identity = 58/160 (36.25%), Postives = 74/160 (46.25%), Query Frame = 2
Query: 2012 VQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAH--WACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
V ++ +ND CR G T EV C S CRNG CIN CD DC DGSDE C L+ C+ N + H W CDG +DC +G DE C +CG +++C +G I R ++CDKD DC +G DE C
Sbjct: 2 VHRNWKCDGSND------CRDG--TDEVGC---GKCGSTQFRCRNGNCINRNYVCDKDNDCGDGSDE-----VACSRLNGGCQF-----KCNNGHCVHRNWKCDGSNDCRDGTDEVGCG----KCGSTQFRCRNGN-CINRNYVCDKDNDCGDGSDEVAC 135 HSP 2 Score: 60.8474 bits (146), Expect = 1.489e-10 Identity = 58/159 (36.48%), Postives = 73/159 (45.91%), Query Frame = 2
Query: 2054 TRFTCRKGRSTAEVLVL-VDPVCSSGS------RL-------CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFG-NVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
T+F CR G V D C GS RL C NG C++ CDG DC DG+DE C +C RC N IN Y CD ++DCG+G DE C N CG +Y+C D + IP ++CD+ DC + DES C
Sbjct: 29 TQFRCRNGNCINRNYVCDKDNDCGDGSDEVACSRLNGGCQFKCNNGHCVHRNWKCDGSNDCRDGTDE--VGCGKCGSTQFRCRNGN---CINRNY----VCDKDNDCGDGSDEVACSRLNGGWCGAGQYRC-DNDRCIPLNWVCDRLNDCHDNSDESGC 177 HSP 3 Score: 49.2914 bits (116), Expect = 1.394e-6 Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 2
Query: 2153 CINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQ 2506
C++ CDG DC DG+DE C +C RC N IN Y CD ++DCG+G DE C + L GG +++CN+G + R + CD DC +G DE C + Q
Sbjct: 1 CVHRNWKCDGSNDCRDGTDE--VGCGKCGSTQFRCRNGN---CINRNY----VCDKDNDCGDGSDEVAC--SRLN-GGCQFKCNNG-HCVHRNWKCDGSNDCRDGTDEVGCGKCGSTQ 105
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Match: EDO43726 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXU8]) HSP 1 Score: 67.3958 bits (163), Expect = 2.382e-11 Identity = 50/171 (29.24%), Postives = 72/171 (42.11%), Query Frame = 2
Query: 2105 VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC----------------RQCDPLSKRCETYNG-----------VAPINP--------------IYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
V C+S C NG+CI+++ CDG DC DGSDE + C R+C P +C+ N A ++P HW CDGE DC +G DE C + C ++ C +G + IP + CD ++C + DE C+ P
Sbjct: 116 VQRTCASNQFTCSNGDCISNSWTCDGDNDCNDGSDEKESLCASKSCKITEFTCRTSRRKCIPSQWKCDGDNDCPDSSDESGCPTASVSPRRCSVGMFKCRNGECVLGHWRCDGEKDCSDGSDEKGCRKS--NCASSEFTCANG-QCIPSSQRCDGTSNCRDSSDEKACVTP 283 HSP 2 Score: 65.0846 bits (157), Expect = 1.168e-10 Identity = 51/182 (28.02%), Postives = 76/182 (41.76%), Query Frame = 2
Query: 2012 VQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDG-TKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETV 2554
+Q T++ +D CR G + E + C + +C N +CI+ + CD + DC D SDED+ R C C + ++ W CDG++DC +G DE + C ++ C K IP + CD D DC + DES C + R GE V
Sbjct: 53 IQATWKCDGEDD------CRDGYRSDES-NCGNVTCGADEFMCSNRKCISRSWTCDNQDDCGDNSDEDRNVQRTCASNQFTCSNGDCIS-------NSWTCDGDNDCNDGSDEKESLCASKSCKITEFTCRTSRRKCIPSQWKCDGDNDCPDSSDESGCPTASVSPRRCSVGMFKCRNGECV 220 HSP 3 Score: 63.929 bits (154), Expect = 2.842e-10 Identity = 52/128 (40.62%), Postives = 66/128 (51.56%), Query Frame = 2
Query: 2117 CSSGSRLC-RNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGY--DEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQ 2491
CS G C + +CI CDG+ DC+DGSDE Q P K C QA W CDGEDDC +GY DE+ C GNV CG ++ C++ K I R++ CD DC + DE R +Q
Sbjct: 1 CSHGQFECVSDQKCIVLRWRCDGEDDCSDGSDE------QGSP--KTCLQDQFTCRNGKCIQATWKCDGEDDCRDGYRSDESNC-GNVT-CGADEFMCSN-RKCISRSWTCDNQDDCGDNSDEDRNVQ 117 HSP 4 Score: 58.9214 bits (141), Expect = 1.010e-8 Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CS G CRNGEC+ CDG+ DC+DGSDE + CR+ + S NG P Q CDG +C + DE C C +++C + IP + +CD DC +G+DE
Sbjct: 207 CSVGMFKCRNGECVLGHWRCDGEKDCSDGSDE--KGCRKSNCASSEFTCANGQCI--PSSQR---CDGTSNCRDSSDEKACV-TPPPCMPGEFKCQSTGRCIPESKVCDGTRDCQDGEDE 318 HSP 5 Score: 57.7658 bits (138), Expect = 2.235e-8 Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLE-CGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDE 2476
CRNG+CI + CDG+ DC DG D+ C + C + W CD +DDCG+ DE + NV C ++ C++G I ++ CD D DC +G DE
Sbjct: 47 CRNGKCIQATWKCDGEDDCRDGYRSDESNCG-----NVTCGADEFMCSNRKCISRSWTCDNQDDCGDNSDEDR---NVQRTCASNQFTCSNG-DCISNSWTCDGDNDCNDGSDE 151
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Match: EDO43938 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXB8]) HSP 1 Score: 66.6254 bits (161), Expect = 4.098e-11 Identity = 44/116 (37.93%), Postives = 53/116 (45.69%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CRNG C+ CDG DC D SDED R P K + A N W CDGE DC +G DEA C + C ++ C + K IP CD +C +G DE C
Sbjct: 128 CRNGRCVLKEWLCDGMDDCGDSSDEDNCLTRPTPPPVKCRKNERMCADGNGCVHRRWICDGERDCLDGSDEAGC--GTIGCSSDEFTCTN-QKCIPLPQKCDGTDNCGDGSDEKMC 240 HSP 2 Score: 59.3066 bits (142), Expect = 7.006e-9 Identity = 48/164 (29.27%), Postives = 63/164 (38.41%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDP------LSKRC--------------------ETYNGVAPINPIYQ----------AHWACDGEDDCGNGYDEAKCFGN----VLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CS+ C +G CI S CD + DC D SDE + C P S RC N NP+ W CDG DDCG+ DE C ++C + C DG + R +ICD + DC++G DE+ C
Sbjct: 38 TCSANEFRCDDGRCITSTFRCDREFDCTDRSDERGCVNKTCAPYEFTCAFSGRCIPGRFRCDHRSDCLDGSDEQNCQNAAKTCNPVTDHTCRNGRCVLKEWLCDGMDDCGDSSDEDNCLTRPTPPPVKCRKNERMCADGNGCVHRRWICDGERDCLDGSDEAGC 201 HSP 3 Score: 51.6026 bits (122), Expect = 1.701e-6 Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C C N +C+ ++ CDG+ DC D SDE E C RC+ + + + CD E DC + DE C C ++ C + IP F CD +DC++G DE C
Sbjct: 1 CPPSDFTCANSQCVPNSFRCDGENDCGDRSDE-SEPTTTCSANEFRCDDGRCIT-------STFRCDREFDCTDRSDERGCVNKT--CAPYEFTCAFSGRCIPGRFRCDHRSDCLDGSDEQNC 113
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Match: hspg2 (heparan sulfate proteoglycan 2 [Source:NCBI gene;Acc:101159991]) HSP 1 Score: 121.709 bits (304), Expect = 2.097e-27 Identity = 76/212 (35.85%), Postives = 106/212 (50.00%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCF-GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSG 2749
C + C++GECI+ CDG+ DCADGSDE + C+P RC+ NG + W CDG++DC + DE C G +C ++C K IP ++ CD++ DC + DE C P + +S I A RG TV TC+ G P P I WR NWG + R+ + N TLTI + + D G Y CEA++
Sbjct: 183 CRADQATCQSGECISRDYICDGERDCADGSDEFRCTPSPCEPNEFRCK--NGRCALK-----LWRCDGDNDCEDNSDEMDCTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC-PPTVTTPPEES--IQAVRGSTVMFTCRAVGVPTPMITWRLNWGHIPVSGRVSM-----NNKNGFGTLTIRDVKESDQGAYTCEAINA 379
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Match: lrp8 (low-density lipoprotein receptor-related protein 8 [Source:NCBI gene;Acc:101167610]) HSP 1 Score: 91.6633 bits (226), Expect = 2.485e-18 Identity = 51/140 (36.43%), Postives = 69/140 (49.29%), Query Frame = 2
Query: 2102 LVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESL 2515
L C++ C+NG+C+ S CDG+P+CADGSDE C + C P E ++ + W CDGE DC NG DE +C + C +QC +G K I F+CD D DC + DE +C P Q
Sbjct: 10 LSKKTCATTDFTCKNGQCLPSKWRCDGEPECADGSDEADAICSRQTCPP-----EKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAADAKACASKDFQCRNG-KCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEF 143 HSP 2 Score: 72.7886 bits (177), Expect = 1.671e-12 Identity = 53/159 (33.33%), Postives = 66/159 (41.51%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC-RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI 2488
F CR G+ V P C C N ECI + CDG PDC D SDE E C R +P RC +W CDG+ DC + DEA C +L C ++QC DGT I C+K DC + DE+ C+
Sbjct: 104 FQCRNGKCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEFRCNNSECIPALWSCDGDPDCKDKSDESAERCSRGKEPQKPRCPVGEFQCGSGECVHMNWKCDGDADCKDKSDEANC--PLLTCRPDEFQCGDGT-CIHGTKQCNKVHDCPDYSDEAGCV 259 HSP 3 Score: 58.9214 bits (141), Expect = 2.383e-8 Identity = 55/189 (29.10%), Postives = 79/189 (41.80%), Query Frame = 2
Query: 1949 ANGGRAADT----QRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEA--KCF----GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
A+G AD Q EK + G +++ +G R C G + E C+S CRNG+CI CDG DC D SDE++ C RC + A W+CDG+ DC + DE+ +C C ++QC G + + + CD D DC + DE+ C
Sbjct: 41 ADGSDEADAICSRQTCPPEKFDCGGAASKCVSLSWRCDGER-DCENG-ADEEQCAADAKACASKDFQCRNGKCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEFRCNNSECIP-------ALWSCDGDPDCKDKSDESAERCSRGKEPQKPRCPVGEFQCGSG-ECVHMNWKCDGDADCKDKSDEANC 219
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Match: lrp8 (low-density lipoprotein receptor-related protein 8 [Source:NCBI gene;Acc:101167610]) HSP 1 Score: 91.2781 bits (225), Expect = 2.807e-18 Identity = 50/136 (36.76%), Postives = 68/136 (50.00%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQ--CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESL 2515
C++ C+NG+C+ S CDG+P+CADGSDE C + C P E ++ + W CDGE DC NG DE +C + C +QC +G K I F+CD D DC + DE +C P Q
Sbjct: 81 TCATTDFTCKNGQCLPSKWRCDGEPECADGSDEADAICSRQTCPP-----EKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAADAKACASKDFQCRNG-KCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEF 210 HSP 2 Score: 72.7886 bits (177), Expect = 1.452e-12 Identity = 53/159 (33.33%), Postives = 66/159 (41.51%), Query Frame = 2
Query: 2060 FTCRKGRSTAEVLVL---------------VDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFC-RQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCI 2488
F CR G+ V P C C N ECI + CDG PDC D SDE E C R +P RC +W CDG+ DC + DEA C +L C ++QC DGT I C+K DC + DE+ C+
Sbjct: 171 FQCRNGKCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEFRCNNSECIPALWSCDGDPDCKDKSDESAERCSRGKEPQKPRCPVGEFQCGSGECVHMNWKCDGDADCKDKSDEANC--PLLTCRPDEFQCGDGT-CIHGTKQCNKVHDCPDYSDEAGCV 326 HSP 3 Score: 59.3066 bits (142), Expect = 2.072e-8 Identity = 55/189 (29.10%), Postives = 79/189 (41.80%), Query Frame = 2
Query: 1949 ANGGRAADT----QRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEA--KCF----GNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
A+G AD Q EK + G +++ +G R C G + E C+S CRNG+CI CDG DC D SDE++ C RC + A W+CDG+ DC + DE+ +C C ++QC G + + + CD D DC + DE+ C
Sbjct: 108 ADGSDEADAICSRQTCPPEKFDCGGAASKCVSLSWRCDGER-DCENG-ADEEQCAADAKACASKDFQCRNGKCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEFRCNNSECIP-------ALWSCDGDPDCKDKSDESAERCSRGKEPQKPRCPVGEFQCGSG-ECVHMNWKCDGDADCKDKSDEANC 286
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Match: ldlrb (low-density lipoprotein receptor [Source:NCBI gene;Acc:101161779]) HSP 1 Score: 89.7373 bits (221), Expect = 9.816e-18 Identity = 52/129 (40.31%), Postives = 67/129 (51.94%), Query Frame = 2
Query: 2114 VCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRC--ETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQP 2494
CSS C NG C+ CDG DC DG+DE C SK C +N APIN W CDG+ DC NG DE C V +C +++C +G + I +F+CD D DC +G DE+ C +P
Sbjct: 29 TCSSSQLKCGNGRCVTRRWICDGTDDCGDGTDELLSTC-----ASKTCLPSQFNCGAPINQCVPKSWHCDGKADCSNGADEKNC--TVKQCKNDEFRCANG-QCISLSFVCDNDNDCSDGSDETTCSKP 149 HSP 2 Score: 70.4774 bits (171), Expect = 6.713e-12 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 2
Query: 2138 CRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDE--AKCFGN--VLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQ 2506
C NG+CI+ + CD DC+DGSDE C+PLS +C V + W CDG++DC +G DE C G +C +++C +G + IP ++ CD DC + DE C +P+ ++
Sbjct: 119 CANGQCISLSFVCDNDNDCSDGSDETTCSKPTCNPLSFQCNNSVCVPSL-------WRCDGDEDCADGSDEWPETCGGKKPAAKCSVSEFECANG-QCIPGSWRCDGGIDCDDRSDELNCSRPVCLE 237 HSP 3 Score: 60.8474 bits (146), Expect = 5.924e-9 Identity = 45/125 (36.00%), Postives = 56/125 (44.80%), Query Frame = 2
Query: 2111 PVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
P C+ S C N C+ S CDG DCADGSDE E C P +K C W CDG DC + DE C V C ++QC DG+ + C+ DC +G DE+ C
Sbjct: 149 PTCNPLSFQCNNSVCVPSLWRCDGDEDCADGSDEWPETCGGKKPAAK-CSVSEFECANGQCIPGSWRCDGGIDCDDRSDELNCSRPV--CLEGQFQCGDGS-CLQGNLKCNSVRDCSDGSDETDC 269
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Match: ENSORLT00000036597.1 (low-density lipoprotein receptor-related protein 1B [Source:NCBI gene;Acc:100049327]) HSP 1 Score: 81.2629 bits (199), Expect = 4.172e-15 Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 2
Query: 2117 CSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
CSS C +G+C++++ CDG PDC DGSDE E C + + C T + W CDG+ DC +G DE C +C ++QC G+ IP A+ CD DC + DE C
Sbjct: 304 CSSSEFKCTSGQCVSASMHCDGHPDCWDGSDE--ESCVK----APVCTTNHRCTQSKECLLQEWMCDGDQDCKDGSDEKDCPVAPADCEDFQWQCRSGSACIPTAWRCDGTKDCDDNSDEHEC 420 HSP 2 Score: 73.1738 bits (178), Expect = 1.417e-12 Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 2
Query: 2117 CSSGSRLCRNG-ECINSAKFCDGKPDCADGSDED--QEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRC 2485
C G+ LC++G ECI + CDG+ DCADGSDE+ + CR+ + + I + H CDG C + DE +C C +QC+D + +P F+CD + DC++G DE+ C
Sbjct: 48 CKVGTVLCKDGSECIQYSLLCDGEQDCADGSDEEDCESGCRE--------DQFQCAHGKKCIDKQH-VCDGTAHCQDHSDEQQCMKRTDNCA---HQCDDKNRCLPATFVCDGERDCLDGTDEASC 161 HSP 3 Score: 70.4774 bits (171), Expect = 8.193e-12 Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 2
Query: 2117 CSSGSRLCRN-GECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFP 2584
C GS+LCR+ +C++ CDG+PDC DGSDE ++ CD +C A + CDG C + DE +C +E G +QC D ++ IP +F+CD + DC +G DE+ C ++ S + G+ V+ + G P
Sbjct: 187 CPLGSKLCRDKSDCVHYNHVCDGEPDCRDGSDE-EDCLSTCDSDQFQC------AHGKKCIEKSQVCDGVPQCQDRSDELEC-AKYME--GCAHQC-DKSRCIPSSFLCDGEQDCADGSDEASC-----AEKECSSSEFKCTSGQCVSASMHCDGHP 327
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Match: SMESG000012051.1 (SMESG000012051.1) HSP 1 Score: 1862.43 bits (4823), Expect = 0.000e+0 Identity = 908/914 (99.34%), Postives = 910/914 (99.56%), Query Frame = 2
Query: 59 MKYLSLFFAILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIXXXXXXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN 2800
MKYLSLFFAILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKS SKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIDSRWSRSDDS AEETSFIILTQAEMKDAG YICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCR CDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIP+AFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTG+PLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN
Sbjct: 1 MKYLSLFFAILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASANYKYEWITPSGERQSSSSFFKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSGSKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTRNRDVIWSFLSKETGQITNIDSRWSRSDDSTAEETSFIILTQAEMKDAGAYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRLCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVLECGGLKYQCNDGTKSIPKAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGYPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLMNFRN 914
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Match: SMESG000027815.1 (SMESG000027815.1) HSP 1 Score: 473.781 bits (1218), Expect = 2.210e-152 Identity = 281/802 (35.04%), Postives = 429/802 (53.49%), Query Frame = 2
Query: 437 IIFMACKEASGASANYKYEWITPSGERQSSSSF-FKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTD-----NKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQT-RNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL---RIIVTPPIIKLRSGQTATFQCYVLGA-GRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR-KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLM 2788
I +AC + A W+ G+ +++ + + + + G Y C + ++ D Q+ F + L I I +S + + E+++ Q+ + +D + +TY+WL+ +N I N IL++ + D++ G Y C+ ++ + Y + ++ Y + +NP R+ E L CEV P +++ Y Y D I I K N+G Y+CV+ + + ++ + Q F SKIEL+ PGPQ++V G+K+ELHCEI ++G +GK A WY G++ + D I ++ RL YVS++V+ +I Q NEG YECRV KE +IV+ E SP KV +G VEFHCRVE + +N ++ W+F SKE NI +D A++TSFI+L +AE+ D+G YICTEP + TAR+ LIV D + +TP I++R+GQ +C+ GR+ PEF N R + + +LT ++ +DN C +GR + + + D +C G R C+NGEC+ +AKFCD CAD SDED CR+CDP+S++CE N + P + HW CDGE+DCGNGYDE C G L CGG + C+D K+IPR ++CD++ DC G+DE+ C P I + S + K+ A + + VTLTC+ TG PLP ++WRFNWGC+ N R +C S+LTI +F+ GDDGIYNCEALS +R++S D+Q+++
Sbjct: 53 FINIACNVTNYALNETSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR----FNRTLHLKITIPSISIDILPEESLKIGGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLK----------QSVSYKIKIITNPALFRYGERFSLRCEVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGK--LDLMEESIQQFAFFRESKIELTTKPGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGD-----IPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPP--ILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQ-TARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKPIGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSD-ICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQILPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSD-NKTIPRGYVCDENIDCSQGEDETGCTSPQITKTS--ATKVVATKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNFVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQVIL 826 HSP 2 Score: 65.855 bits (159), Expect = 1.580e-10 Identity = 104/501 (20.76%), Postives = 199/501 (39.72%), Query Frame = 2
Query: 197 TTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASA----NYKYEWITPSGERQSSSSFFKNQVGPE-FTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV---FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQ--SMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEV--TPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKI-----ELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQE------INSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC-RVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTR 1624
T+ W+D + +N L I + + G Y C ++ D ++ N++L L++ + S + ++ + + G I C + ++ Y W+ + +++ + V E G+Y C+ +++ E +V +K K+ NP +GE +C+V+ + + Y+W K+ I NDQ L +K + GTY C + Q S ++ + + F +S E +T+ P+ V E EL+CE+ + R E Y N + + RLD Q VS S+ +++ N + + K + I L E P + V+ G E HC + ++ N W F+ +E I + + N ++ + S +VL + ++ G Y C G+T + +IV+ ++ + + +V G V+ C + Q R
Sbjct: 68 TSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR-FNRTLHLKIT----IPSISIDILPEESLKI--GGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLKQSVSYKIKIITNPALFRYGERFSLRCEVE------PFYQNIKYTWY-KKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGKLDLMEESIQQFAFFRESKI------ELTTK--PGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGDIPLVNRLDG------QYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQ--TSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGR 538
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Match: SMESG000027815.1 (SMESG000027815.1) HSP 1 Score: 473.396 bits (1217), Expect = 2.466e-152 Identity = 281/802 (35.04%), Postives = 429/802 (53.49%), Query Frame = 2
Query: 437 IIFMACKEASGASANYKYEWITPSGERQSSSSF-FKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTD-----NKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQT-RNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL---RIIVTPPIIKLRSGQTATFQCYVLGA-GRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR-KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLM 2788
I +AC + A W+ G+ +++ + + + + G Y C + ++ D Q+ F + L I I +S + + E+++ Q+ + +D + +TY+WL+ +N I N IL++ + D++ G Y C+ ++ + Y + ++ Y + +NP R+ E L CEV P +++ Y Y D I I K N+G Y+CV+ + + ++ + Q F SKIEL+ PGPQ++V G+K+ELHCEI ++G +GK A WY G++ + D I ++ RL YVS++V+ +I Q NEG YECRV KE +IV+ E SP KV +G VEFHCRVE + +N ++ W+F SKE NI +D A++TSFI+L +AE+ D+G YICTEP + TAR+ LIV D + +TP I++R+GQ +C+ GR+ PEF N R + + +LT ++ +DN C +GR + + + D +C G R C+NGEC+ +AKFCD CAD SDED CR+CDP+S++CE N + P + HW CDGE+DCGNGYDE C G L CGG + C+D K+IPR ++CD++ DC G+DE+ C P I + S + K+ A + + VTLTC+ TG PLP ++WRFNWGC+ N R +C S+LTI +F+ GDDGIYNCEALS +R++S D+Q+++
Sbjct: 49 FINIACNVTNYALNETSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR----FNRTLHLKITIPSISIDILPEESLKIGGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLK----------QSVSYKIKIITNPALFRYGERFSLRCEVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGK--LDLMEESIQQFAFFRESKIELTTKPGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGD-----IPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPP--ILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQ-TARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKPIGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSD-ICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQILPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSD-NKTIPRGYVCDENIDCSQGEDETGCTSPQITKTS--ATKVVATKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNFVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQVIL 822 HSP 2 Score: 65.855 bits (159), Expect = 1.485e-10 Identity = 104/501 (20.76%), Postives = 199/501 (39.72%), Query Frame = 2
Query: 197 TTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASA----NYKYEWITPSGERQSSSSFFKNQVGPE-FTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV---FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQ--SMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPK-NVRFFEPLELNCEV--TPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELS-----EPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQE------INSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC-RVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTR 1624
T+ W+D + +N L I + + G Y C ++ D ++ N++L L++ + S + ++ + + G I C + ++ Y W+ + +++ + V E G+Y C+ +++ E +V +K K+ NP +GE +C+V+ + + Y+W K+ I NDQ L +K + GTY C + Q S ++ + + F +S E +T+ P+ V E EL+CE+ + R E Y N + + RLD Q VS S+ +++ N + + K + I L E P + V+ G E HC + ++ N W F+ +E I + + N ++ + S +VL + ++ G Y C G+T + +IV+ ++ + + +V G V+ C + Q R
Sbjct: 64 TSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR-FNRTLHLKIT----IPSISIDILPEESLKI--GGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLKQSVSYKIKIITNPALFRYGERFSLRCEVE------PFYQNIKYTWY-KKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGKLDLMEESIQQFAFFRESKI------ELTTK--PGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGDIPLVNRLDG------QYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQ--TSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGR 534
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Match: SMESG000027815.1 (SMESG000027815.1) HSP 1 Score: 462.225 bits (1188), Expect = 5.070e-148 Identity = 277/802 (34.54%), Postives = 427/802 (53.24%), Query Frame = 2
Query: 437 IIFMACKEASGASANYKYEWITPSGERQSSSSF-FKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTD-----NKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQT-RNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL---RIIVTPPIIKLRSGQTATFQCYVLGA-GRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR-KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLM 2788
I +AC + A W+ G+ +++ + + + + G Y C + ++ D Q+ F + L I I +S + + E+++ Q+ + +D + +TY+WL+ +N I N IL++ + D++ G Y C+ ++ + Y + ++ Y + +NP R+ E L CEV P +++ Y Y D I I K N+G Y+CV+ + + ++ + Q F + +L+ PGPQ++V G+K+ELHCEI ++G +GK A WY G++ + D I ++ RL YVS++V+ +I Q NEG YECRV KE +IV+ E SP KV +G VEFHCRVE + +N ++ W+F SKE NI +D A++TSFI+L +AE+ D+G YICTEP + TAR+ LIV D + +TP I++R+GQ +C+ GR+ PEF N R + + +LT ++ +DN C +GR + + + D +C G R C+NGEC+ +AKFCD CAD SDED CR+CDP+S++CE N + P + HW CDGE+DCGNGYDE C G L CGG + C+D K+IPR ++CD++ DC G+DE+ C P I + S + K+ A + + VTLTC+ TG PLP ++WRFNWGC+ N R +C S+LTI +F+ GDDGIYNCEALS +R++S D+Q+++
Sbjct: 53 FINIACNVTNYALNETSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR----FNRTLHLKITIPSISIDILPEESLKIGGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLK----------QSVSYKIKIITNPALFRYGERFSLRCEVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGK--LDLMEESIQQFAF---FREKLTTKPGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGD-----IPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPP--ILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQ-TARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKPIGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSD-ICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQILPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSD-NKTIPRGYVCDENIDCSQGEDETGCTSPQITKTS--ATKVVATKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNFVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQVIL 823 HSP 2 Score: 65.855 bits (159), Expect = 1.376e-10 Identity = 102/500 (20.40%), Postives = 194/500 (38.80%), Query Frame = 2
Query: 197 TTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASA----NYKYEWITPSGERQSSSSFFKNQVGPE-FTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV---FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQ--SMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEV--TPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKI-----ELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQE------INSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC-RVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTR 1624
T+ W+D + +N L I + + G Y C ++ D ++ N++L L++ + S + ++ + + G I C + ++ Y W+ + +++ + V E G+Y C+ +++ E +V +K K+ NP +GE +C+V+ + + Y+W K+ I NDQ L +K + GTY C + Q S ++ + + F + T Y R E EL+CE+ + R E Y N + + RLD Q VS S+ +++ N + + K + I L E P + V+ G E HC + ++ N W F+ +E I + + N ++ + S +VL + ++ G Y C G+T + +IV+ ++ + + +V G V+ C + Q R
Sbjct: 68 TSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR-FNRTLHLKIT----IPSISIDILPEESLKI--GGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLKQSVSYKIKIITNPALFRYGERFSLRCEVE------PFYQNIKYTWY-KKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGKLDLMEESIQQFAFFREKLTTKPGPQVYVHR----------GEKKELHCEIETSSGNRGKEAEWYINGKKFKNGDIPLVNRLDG------QYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQ--TSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGR 535
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Match: SMESG000027815.1 (SMESG000027815.1) HSP 1 Score: 461.84 bits (1187), Expect = 5.488e-148 Identity = 277/802 (34.54%), Postives = 427/802 (53.24%), Query Frame = 2
Query: 437 IIFMACKEASGASANYKYEWITPSGERQSSSSF-FKNQVGPEFTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPVFGETVEFKCQVDKSKTD-----NKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQSMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEVTPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQT-RNRDVIWSFLSKETGQITNIXXXX-XXXXXXAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDL---RIIVTPPIIKLRSGQTATFQCYVLGA-GRSPDYPEFFMANGGRAADTQRTTVEKLEAGKVQLTYRA-VTTNDNGTRFTCR-KGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKCFGNVL-ECGGLKYQCNDGTKSIPRAFICDKDTDCVNGDDESRCIQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQLLM 2788
I +AC + A W+ G+ +++ + + + + G Y C + ++ D Q+ F + L I I +S + + E+++ Q+ + +D + +TY+WL+ +N I N IL++ + D++ G Y C+ ++ + Y + ++ Y + +NP R+ E L CEV P +++ Y Y D I I K N+G Y+CV+ + + ++ + Q F + +L+ PGPQ++V G+K+ELHCEI ++G +GK A WY G++ + D I ++ RL YVS++V+ +I Q NEG YECRV KE +IV+ E SP KV +G VEFHCRVE + +N ++ W+F SKE NI +D A++TSFI+L +AE+ D+G YICTEP + TAR+ LIV D + +TP I++R+GQ +C+ GR+ PEF N R + + +LT ++ +DN C +GR + + + D +C G R C+NGEC+ +AKFCD CAD SDED CR+CDP+S++CE N + P + HW CDGE+DCGNGYDE C G L CGG + C+D K+IPR ++CD++ DC G+DE+ C P I + S + K+ A + + VTLTC+ TG PLP ++WRFNWGC+ N R +C S+LTI +F+ GDDGIYNCEALS +R++S D+Q+++
Sbjct: 49 FINIACNVTNYALNETSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR----FNRTLHLKITIPSISIDILPEESLKIGGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLK----------QSVSYKIKIITNPALFRYGERFSLRCEVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGK--LDLMEESIQQFAF---FREKLTTKPGPQVYVHRGEKKELHCEIETSSGNRGKEAEWYINGKKFKNGD-----IPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPP--ILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQ-TARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKPIGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSD-ICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQILPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSD-NKTIPRGYVCDENIDCSQGEDETGCTSPQITKTS--ATKVVATKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNFVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQVIL 819 HSP 2 Score: 65.855 bits (159), Expect = 1.316e-10 Identity = 102/500 (20.40%), Postives = 194/500 (38.80%), Query Frame = 2
Query: 197 TTYEWIDPRNNLRGSNVNLTITNFSYEHVGRYTCKASQIIDGRLSTTNKSLRLQVKDKTGLGSNNFQVIVPQVYETFASGIIFMACKEASGASA----NYKYEWITPSGERQSSSSFFKNQVGPE-FTGQYTCRMTRISDNQVSEGKAFVQVKALPIMIEKVSGNPV---FGETVEFKCQVDKSKTDNKVFSSYTYSWLDSKNNIISNDQILRLKLDDQTKFGTYTCRINTQ--SMNPPYVQNQVIEIRFTGDSNTGGRSRNEYSTRFSSNPKNVRFFEPLELNCEV--TPPLRDVTYEIYFNDRLISQSSRHTIPRLDKTNMGVYQCVSRGRDSNTNELINYNSTYVIQAEFKSASKI-----ELSEPPGPQIFVRAGDKRELHCEIGVNTGLQGKNAIWYFKGQE------INSNDYARYNIQVIPRLYVSIMVLRNIQQTNEGKYEC-RVRGETKEAYIIVMAKSKNTEVSPSQQTRKVGDGIPVEFHCRVEGYQTR 1624
T+ W+D + +N L I + + G Y C ++ D ++ N++L L++ + S + ++ + + G I C + ++ Y W+ + +++ + V E G+Y C+ +++ E +V +K K+ NP +GE +C+V+ + + Y+W K+ I NDQ L +K + GTY C + Q S ++ + + F + T Y R E EL+CE+ + R E Y N + + RLD Q VS S+ +++ N + + K + I L E P + V+ G E HC + ++ N W F+ +E I + + N ++ + S +VL + ++ G Y C G+T + +IV+ ++ + + +V G V+ C + Q R
Sbjct: 64 TSIRWLDKDGKVAAANRYLYIKSLLKQDEGIYNCSVEKVKDPQIR-FNRTLHLKIT----IPSISIDILPEESLKI--GGQIKRQCSDLGLPQETIVDDFTYTWLNQQNKTIGNTNILQIPVVDESVVGRYICQYKSKETSKIYEAATYVNLKQSVSYKIKIITNPALFRYGERFSLRCEVE------PFYQNIKYTWY-KKDEFIGNDQELVIKSFKKDNVGTYKCVASLQLPSGKLDLMEESIQQFAFFREKLTTKPGPQVYVHR----------GEKKELHCEIETSSGNRGKEAEWYINGKKFKNGDIPLVNRLDG------QYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEGQSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQ--TSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGR 531 The following BLAST results are available for this feature:
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Basement membrane-specific heparan sulfate proteoglycan core protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020058 ID=SMED30020058|Name=Basement membrane-specific heparan sulfate proteoglycan core protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3105bpback to top protein sequence of SMED30020058-orf-1 >SMED30020058-orf-1 ID=SMED30020058-orf-1|Name=SMED30020058-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=915bp MKYLSLFFAILSFLYVVNAQEEAIFVELGHTVILQCRPQSVMSNVPTTYEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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