Neur_chan_LBD domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020055 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRG3 (gamma-aminobutyric acid type A receptor gamma3 subunit [Source:HGNC Symbol;Acc:HGNC:4088]) HSP 1 Score: 60.4622 bits (145), Expect = 3.990e-9 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D + S+ YP E+ + N+++ + + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R AL +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRW------RKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 59.3066 bits (142), Expect = 8.660e-9 Identity = 64/281 (22.78%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 58.9214 bits (141), Expect = 1.221e-8 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 34 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 298
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 58.9214 bits (141), Expect = 1.287e-8 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 123 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 387
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 58.5362 bits (140), Expect = 1.571e-8 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: CG8916 (gene:FBgn0030707 transcript:FBtr0301233) HSP 1 Score: 55.4546 bits (132), Expect = 7.475e-8 Identity = 61/258 (23.64%), Postives = 112/258 (43.41%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLLDNRSDIKDISLS-----SFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 YS + + + WR+ L + IK +SLS W P + F K S H ++ K + I R++ +ELQ+FP D Q + + + IN+ + E + ++ + GM +++L + T+ + + ++ R YFLI ++ + +L++ SF I T R++LC+T++LT T + +LPK+ Y T LD +L + L+ + A +F Sbjct: 52 YSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRP----DTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFS-----VLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 300
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: CG8916 (gene:FBgn0030707 transcript:FBtr0301232) HSP 1 Score: 55.0694 bits (131), Expect = 1.035e-7 Identity = 61/258 (23.64%), Postives = 112/258 (43.41%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLLDNRSDIKDISLS-----SFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 YS + + + WR+ L + IK +SLS W P + F K S H ++ K + I R++ +ELQ+FP D Q + + + IN+ + E + ++ + GM +++L + T+ + + ++ R YFLI ++ + +L++ SF I T R++LC+T++LT T + +LPK+ Y T LD +L + L+ + A +F Sbjct: 154 YSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRP----DTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFS-----VLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYF 402
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 60.4622 bits (145), Expect = 2.631e-9 Identity = 63/242 (26.03%), Postives = 110/242 (45.45%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISI-ENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1074 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE++ + +++ + + W LY+ V + + N E +MT SRR YF I ++ SM +L++ SF I R +L +TT+LT T ++LPK+ Y+T +D Sbjct: 95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRW------QRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 59.6918 bits (143), Expect = 3.906e-9 Identity = 63/242 (26.03%), Postives = 110/242 (45.45%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISI-ENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1074 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE++ + +++ + + W LY+ V + + N E +MT SRR YF I ++ SM +L++ SF I R +L +TT+LT T ++LPK+ Y+T +D Sbjct: 95 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRW------QRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMD 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211]) HSP 1 Score: 59.3066 bits (142), Expect = 6.008e-9 Identity = 62/275 (22.55%), Postives = 125/275 (45.45%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D+++E Y+ ++ Q WR+ L +++L + W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ D N + G++ E + VE+ + G R ++F R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 68 INIASIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD----NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 332
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb4 (gamma-aminobutyric acid type A receptor beta4 subunit [Source:ZFIN;Acc:ZDB-GENE-070424-211]) HSP 1 Score: 58.9214 bits (141), Expect = 7.855e-9 Identity = 62/275 (22.55%), Postives = 125/275 (45.45%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D+++E Y+ ++ Q WR+ L +++L + W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ D N + G++ E + VE+ + G R ++F R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 68 INIASIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGD----NAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 332
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 57.7658 bits (138), Expect = 2.035e-8 Identity = 65/281 (23.13%), Postives = 131/281 (46.62%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ S + +D +E ++++ ++ + K + G R ++F + R YF++ ++ S++ +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 75 IDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW--QGGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 338
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000020814.1 (gamma-aminobutyric acid type A receptor theta subunit [Source:NCBI gene;Acc:100496398]) HSP 1 Score: 62.7734 bits (151), Expect = 6.027e-10 Identity = 63/276 (22.83%), Postives = 129/276 (46.74%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y I+++K + + + + +E ++ + E + +K ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 60 IDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQFTIIE-TRLVSKNVVFTTGSYPR----LSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 320
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000020832.1 (gamma-aminobutyric acid type A receptor theta subunit [Source:NCBI gene;Acc:100496398]) HSP 1 Score: 62.7734 bits (151), Expect = 6.183e-10 Identity = 63/276 (22.83%), Postives = 129/276 (46.74%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y I+++K + + + + +E ++ + E + +K ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 77 IDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQFTIIE-TRLVSKNVVFTTGSYPR----LSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 337
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000004017.1 (gamma-aminobutyric acid (GABA) A receptor, beta 1 [Source:NCBI gene;Acc:100489344]) HSP 1 Score: 60.077 bits (144), Expect = 4.800e-9 Identity = 66/285 (23.16%), Postives = 133/285 (46.67%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 V +R I V VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++K D + ++ +E ++++ ++ V ++ +I P+ ++ + R R YF++ ++ S++ +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 63 VGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGD-KAITGVEKIELPQFSIIDYKMV-SRNVIFSTGAYPR----LSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: ccdc134 (coiled-coil domain containing 134 [Source:Xenbase;Acc:XB-GENE-951215]) HSP 1 Score: 58.5362 bits (140), Expect = 1.323e-8 Identity = 62/269 (23.05%), Postives = 117/269 (43.49%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D + S+ YP E+ + N+++ + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R AL +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 85 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPREEMVYRW------RKNSVETANQKSWRLYQFDFMGLRNTTEIVKTSAGDYIVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALIEYAALNYY 343
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Match: dusp5 (dual specificity phosphatase 5 [Source:Xenbase;Acc:XB-GENE-957572]) HSP 1 Score: 58.151 bits (139), Expect = 1.876e-8 Identity = 63/281 (22.42%), Postives = 134/281 (47.69%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + + ++ +E ++++ +H ++ +K ++ P+ ++ + + R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGD-NAVTGVERIELPQFSIMDH-KLVSKNVVFATGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrg3 (gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 [Source:MGI Symbol;Acc:MGI:95624]) HSP 1 Score: 61.6178 bits (148), Expect = 1.034e-9 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D +T S+ YP E+ + N+++ + + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R L +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRW------RKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 59.3066 bits (142), Expect = 7.273e-9 Identity = 64/281 (22.78%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH + ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEH-RLVSRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 58.9214 bits (141), Expect = 9.215e-9 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 58.5362 bits (140), Expect = 1.036e-8 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D + ++ +E ++++ EH V ++ ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 89 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD-KAVTGVERIELPQFSIVEHRLV-SRNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 353
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb2 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620]) HSP 1 Score: 57.3806 bits (137), Expect = 2.782e-8 Identity = 66/281 (23.49%), Postives = 127/281 (45.20%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D N + G+ E + V+ + T + G R ++F + R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ + +A ++ F Sbjct: 66 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDD----NAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLK--RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIF 330
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P28473|GBRG3_RAT (Gamma-aminobutyric acid receptor subunit gamma-3 OS=Rattus norvegicus OX=10116 GN=Gabrg3 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 6.920e-9 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D +T S+ YP E+ + N+++ + + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R L +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRW------RKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P27681|GBRG3_MOUSE (Gamma-aminobutyric acid receptor subunit gamma-3 OS=Mus musculus OX=10090 GN=Gabrg3 PE=2 SV=2) HSP 1 Score: 61.6178 bits (148), Expect = 7.231e-9 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D +T S+ YP E+ + N+++ + + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R L +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRW------RKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|Q99928|GBRG3_HUMAN (Gamma-aminobutyric acid receptor subunit gamma-3 OS=Homo sapiens OX=9606 GN=GABRG3 PE=2 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 1.916e-8 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +IF W + L S +K ++L+S W P + IF +K++ +H ++ + + I R++ L+L +FP D + S+ YP E+ + N+++ + + W LY+ + + + +MT SRR YF I ++ + +L++ SF I T R AL +TT+LT T ++LP++ Y+T +D + LF+ +A+ +++ Sbjct: 82 IGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIP----DTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRW------RKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 340
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P19019|GBRB3_CHICK (Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus gallus OX=9031 GN=GABRB3 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.538e-8 Identity = 68/283 (24.03%), Postives = 129/283 (45.58%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE--AKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ D N + G+E E + VE +K ++ P+ ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD----NAVTGVERIELPQFSIVEYRLVSKNVVFATGAYPR----LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P24045|GBRB4_CHICK (Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus OX=9031 GN=GABRB4 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 3.882e-8 Identity = 64/276 (23.19%), Postives = 126/276 (45.65%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I ++ VN Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ +D + + GME E L + +E + + + ++ + R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 71 IDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGND----SAVTGMEVLE--LPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIF 330
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A3R7CFX9 (Neuronal acetylcholine receptor subunit alpha-7 OS=Clonorchis sinensis OX=79923 GN=CHRNA7 PE=4 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 3.965e-70 Identity = 148/369 (40.11%), Postives = 215/369 (58.27%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDN-------RSDIKDISL---------------------SSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQI--MTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHA-STSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEK 1353 V L +F+KI +VDTVNE Y A+IFLQ++WREPLLD R++ + + FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+TV+ + + EV+++ P ++S+++ +SQEW ++ HV++ + + + G +R+ + FT R++RR YF++N LIS + LL+F+ FS+P RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N +++L WH + S F P +K E Y++ LL Y L ++FGL +Y DAGSRRR M KD +F + ++IE EK Sbjct: 39 VELMLIFVKIGQVDTVNERYQADIFLQARWREPLLDATWNTSRPRNNFRTFKMVENPVMELAPKRHLHTLKLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPDFEAYLVEKRRIKGVFHETLELKHFPFDCQDLSVTVTCDRTVEEVELVPSPTEVSQVDRRCAADSQEWKIFHHVDIASMEIQTAYSPGTCKRRHPGLVFTSRSARRAGYFMVNMALISCVLSLLSFSVFSVPVDG--NRLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKMVLANFFMLVILTVWHTIARSVFAKYP---------GLKDKEQYVVYTLLSAYCLGAVVFGLTVYLDAGSRRRLMKSKDMDFTQHKQRIELEK 396
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A4E0RSR9 (Uncharacterized protein OS=Fasciola hepatica OX=6192 GN=D915_005714 PE=4 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.398e-69 Identity = 147/365 (40.27%), Postives = 213/365 (58.36%), Query Frame = 1 Query: 355 VFIKIFKVDTVNEFYSAEIFLQSKWREPLLD-------------NRSDIKD---------------ISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQ--IMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQV--ETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEK 1353 +F+KI +VDTVNE Y A+IFLQ++WREPLLD +S +++ + FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFD QDLS+TV+ + ++EV ++ P ++S+++ +SQEW ++ HV+VE + + G +R+ + FT R++RR YF++N LIS + LL+F FS+P RL + LLT+VTFK A SQNLPKI YLTYLDK +L N +++L WH T++ + + + K + E Y++ LL Y L +IFGL +Y DAGSRRR M KD EF +L +IE EK Sbjct: 3 IFVKIGQVDTVNERYQADIFLQARWREPLLDATWKSERAQKNWRGKSGVENPIQDLVPKRHLHTLGLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPTFEAYLVEKRRIKGVFHETLELKHFPFDVQDLSVTVTCDRSVDEVLLVPSPTEVSQVDRRGAADSQEWKIFHHVDVERMEIQTAYSPGTSKRRHPGLVFTSRSARRSGYFMVNMVLISCVLCLLSFCIFSVPVDG--NRLQQALLLLLTTVTFKFAASQNLPKISYLTYLDKVVLANFFMLVILTVWH----------TIARSLSASYPKLLDNEKYVVYTLLSSYCLGAVIFGLTVYLDAGSRRRLMQRKDVEFGQLKTRIEREK 355
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A075A8W6 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_08254 PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 6.020e-68 Identity = 150/374 (40.11%), Postives = 218/374 (58.29%), Query Frame = 1 Query: 316 VNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDN-------RSDIKDISL---------------------SSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQI--MTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHA-STSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIE 1344 V P AR V L +F+KI +VDTVNE Y A+IFLQ++WREPLLD R++ + ++ FWNP++ ++N E +SHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+TV+ + + EV+++ P ++S+++ +SQEW ++ HV++ + + + G +R+ + FT R++RR YF++N LIS + LL+F+ FS+P RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N +++L WH + S F P +K E Y++ LL Y L ++FGL +Y DAGSRRR M KD +F + ++IE Sbjct: 232 VRHPPAR-VELMLIFVKIGQVDTVNERYQADIFLQARWREPLLDATWNTSRPRNNFRTFNMVENPVMELAPKRHLHTLKLQDDEFWNPRLLLDNAQGEPIEIVSHEVEFVEPDFEAYLVEKRRIKGIFHETLELKHFPFDCQDLSVTVTCDRTVEEVELVPSPTEVSQVDRRCAADSQEWKIFHHVDIASMEIQTAYSPGTCKRRHPGLVFTSRSARRAGYFMVNMALISCVLSLLSFSVFSVPVD--GNRLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKMVLANFFMLVILTVWHTIARSVFAKYP---------GLKDKEQYVVYTLLSAYCLGAVVFGLTVYLDAGSRRRLMKSKDMDFTQHKQRIE 593
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: R7VF52 (Neur_chan_LBD domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_228357 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.199e-67 Identity = 134/336 (39.88%), Postives = 202/336 (60.12%), Query Frame = 1 Query: 337 LVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRS--DIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEK 1338 V LR VF+KI ++DT+ E YSA+ F+Q+KWREP LD ++ ++K I L FWNP + IEN+ ETK + S + +A EA++ E+RRV G F E LEL FP D QDL++T+++E P E+ ++ +++S +N ++ QEW L+EH+EV K M + + + ++ TCRA+RR YF N FL+ L+F +F++ P RL L T LLTS+TFK ++Q+LPKI YLTY+DK +L +++ + ++C WHA + F + T +V +I ++ + V+ IF L YFDA RRR M KD+E+ L K Sbjct: 33 FVELRVVFLKIGEIDTLKEQYSADTFIQAKWREPALDGKTTEELKRIDLDRFWNPLLFIENVLSETKEATWLTASTNSRA-EAFVLERRRVRGVFMENLELNDFPLDVQDLTVTITSERPDTEIDIIPDENEMSGINVQTFVDQQEWRLHEHIEVSKKVMTQEYSSSNRCHPALSVTCRAARRPGYFYWNVFLVMFFISALSFATFAVSPELPQNRLQLSFTLLLTSITFKFVINQSLPKISYLTYMDKYVLLSLVILCMVCVWHAVVTVFVHHGINFLMTLERDV-----FIAFSVIYIGFHVVFIFWL--YFDACKRRRLMKHKDKEYLDFLAK 360
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A5K4FCR6 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 3.068e-66 Identity = 152/385 (39.48%), Postives = 224/385 (58.18%), Query Frame = 1 Query: 301 NNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLD----------------------------NRSDIKDISLSS--FWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQI--MTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVK--QVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEK 1353 N K +N AR V L +F+K+ +VDTVNE Y A+IFLQ++WREPLLD ++ + + L FWNP++ I+N E ISHEV + EAY+ EKRR+ G F E LEL+HFPFDCQDLS+T++ + +EV+++ P ++S+++ +SQEW ++ HV++++ + + +R + FT R++RR YFL+N LIS + LL+F++FS+P + RL L + LLT+VTFK A SQNLPKI YLTYLDK +L N +++L WHA ++ A + + K + E Y++ LL Y + ++FGL +Y DAGSRRR M KD EF + ++IE EK Sbjct: 264 NIGKPMNMSKAR-VELVLIFVKVGQVDTVNERYQADIFLQARWREPLLDAMWNKSSLKSKSSWQTNPSIENPFTDLTSKRQLNTLKLQDDEFWNPRLLIDNAEGEPIEIISHEVEFIEPDFEAYLVEKRRIKGIFHETLELRHFPFDCQDLSVTITCDRTTDEVELVASPTEVSQVDVRCAADSQEWKIFHHVDIKSIEIQTGYSPSTSKRHHPGLVFTSRSARRSGYFLVNMILISCVLCLLSFSAFSVPANE--NRLQLSLLLLLTTVTFKFAASQNLPKISYLTYLDKVVLVNFFMLVILTVWHA----------IARAVSASKPKFLEYEHYVMYSLLSCYCIGSVLFGLTVYLDAGSRRRLMKRKDIEFNQYKQQIEAEK 635
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: GABRG3 (gamma-aminobutyric acid type A receptor gamma3 subunit [Source:NCBI gene;Acc:103040847]) HSP 1 Score: 59.6918 bits (143), Expect = 4.653e-9 Identity = 62/269 (23.05%), Postives = 118/269 (43.87%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 I V ++N Y +I W + L S +K ++L+S W P + IF +K++ SH ++ + + I R++ L+L +FP D + S+ YP +E+ + N+++ + + W LY+ + + + + +MT SRR YF I ++ + +L++ SF I T R AL +TT+LT T +LP++ Y+T +D + LF+ +A+ +++ Sbjct: 147 IGPVSSINMEYQIDIIFAQTWTDSRLRYNSTMKILTLNSNMVGLIWVP----DTIFRNSKNADSHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPRDEMIYKW------RKNSVEAADQKSWRLYQFDFMGLRNTTDVIKTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 405
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:ZFIN;Acc:ZDB-GENE-090313-230]) HSP 1 Score: 57.7658 bits (138), Expect = 1.482e-8 Identity = 65/281 (23.13%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + S + +D +E ++++ ++ + K + G R ++F + R YF++ ++ S++ +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 53 IDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW--QEGSSVTGVDNIELPQFSIIDYKTLSKKVVFA---TGSYPRLSLSFKLK--RNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 316
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4-like [Source:NCBI gene;Acc:103032374]) HSP 1 Score: 57.3806 bits (137), Expect = 2.173e-8 Identity = 66/281 (23.49%), Postives = 126/281 (44.84%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D+++E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ N + G++ E + VE+ + G R ++F R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 INIASIDSISEVNMDYTITMYFQQSWRDKRLAYVEMPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQ----GGKNAVTGVDKLELPQFSIVELHLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: GABRG3 (gamma-aminobutyric acid type A receptor gamma3 subunit [Source:NCBI gene;Acc:103040847]) HSP 1 Score: 56.9954 bits (136), Expect = 2.879e-8 Identity = 59/259 (22.78%), Postives = 113/259 (43.63%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFF 1143 Y +I W + L S +K ++L+S W P + IF +K++ SH ++ + + I R++ L+L +FP D + S+ YP +E+ + N+++ + + W LY+ + + + + +MT SRR YF I ++ + +L++ SF I T R AL +TT+LT T +LP++ Y+T +D + LF+ +A+ +++ Sbjct: 85 YQIDIIFAQTWTDSRLRYNSTMKILTLNSNMVGLIWVP----DTIFRNSKNADSHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPRDEMIYKW------RKNSVEAADQKSWRLYQFDFMGLRNTTDVIKTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYY 333
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrb4 (gamma-aminobutyric acid receptor subunit beta-4-like [Source:NCBI gene;Acc:103032374]) HSP 1 Score: 56.9954 bits (136), Expect = 3.313e-8 Identity = 66/281 (23.49%), Postives = 126/281 (44.84%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D+++E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y +++ N + G++ E + VE+ + G R ++F R R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 INIASIDSISEVNMDYTITMYFQQSWRDKRLAYVEMPLNLTLDNR--VAD----QLWLP----DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQ----GGKNAVTGVDKLELPQFSIVELHLVSREVRFTTGSYPRLSLSF--RIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]) HSP 1 Score: 51.2174 bits (121), Expect = 3.178e-7 Identity = 62/264 (23.48%), Postives = 116/264 (43.94%), Query Frame = 1 Query: 397 YSAEIFLQSKWREPLL------DNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTC-----RASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSF 1140 Y IFL+ +W +P L D+ D+ L S W P + F K + HEV+ K ++ + R++ ++L++FP D Q ++ + S Y +N++ + E + + +G+ ++ L + ++ T K FTC R+ Y+LI ++ S + +L++ SF I R+AL +TT+LT T +LPK+ Y+ +D + +LF+ +A+ +F Sbjct: 27 YRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDL----FFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDL-IFEWKQE-GAVQVAEGLTLPQFVLKDEKDLVYCT---------KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 275
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO32790 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU26]) HSP 1 Score: 110.153 bits (274), Expect = 2.584e-26 Identity = 84/309 (27.18%), Postives = 149/309 (48.22%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGM---ESQEWNLYEHVEVEAKTMINDCNIGPKERQ--IMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILI 1251 V +RC + +D + + ++ E+++ + WREP L + + +++ + W+PKIS N + + + Y + E ++ G F+E L+ FP D Q+LSI +S+++ V + D++K + + ++W LY HV + T + +GP +R + T RR ++ N ++ S+ L+F SF+IPP T RL + + LL SV +K S +LP+ YLT+LDK LGN+LFI + + T V+ +TY + CL L +++ Sbjct: 18 VLIRCGISFLGDIDVIRQQFTCELWMTASWREPKLAGKKN-EEVKWDNEWSPKISFSNSLLLDRVYKGRRLYYEENSTVPLAQEVYKIRGTFKEQFSLEQFPVDLQELSIIISSDWSDRTVTFEK---DMAKPDYLRQQTFSSPRDWVLYPHVHTDTATQEGE-GLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQQTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAVLN---------------TIAVAVESRDTYDMVCLYAGLALYVIL 306
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO35410 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK4]) HSP 1 Score: 64.6994 bits (156), Expect = 1.943e-11 Identity = 71/277 (25.63%), Postives = 135/277 (48.74%), Query Frame = 1 Query: 313 SVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLL--DNRSDIKDISLSSFWNPKISIENI-FMETKSSISHEVSYSGKAREAYITEKRRVSGGFREV---------LELQHFPFDCQDLSITVSTEYPINEVKMLECPHD-LSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFI 1104 S +PV +VY+ I+ + +N ++ +I+L+ WR+ L + ++ ++LSS N +I + + F+ TK + H+V+ + Y+ + + F + L+L+ FP D Q S+++ + Y +L ++ L + I + E +E + V +N NIG + F R RR YFLI+ ++ S++ ++++ SF I P R+AL +TT+LT T + NLPK+ Y+ +D +L ++F+ Sbjct: 41 SKGEPV--VVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRDERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVT-----TDNYLLQVKPDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLES-YGYQSTDVLYVWNERLDNTSAIYIHDDLELPQFEVLGVSRSAKMNKYNIGNHSSLVANF--RMKRRIGYFLIDTYIPSTIIVIISWISFWIDPETAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLIFV 307
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO26859 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAV8]) HSP 1 Score: 59.6918 bits (143), Expect = 1.823e-10 Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 763 QEWNLYEHVEVEAKTMINDCNIGPKERQ--IMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILI 1251 ++W LY HV + T + +GP +R + T RR ++ N ++ S+ L+F SF+IPP T RL + + LL SV +K S +LP+ YLT+LDK LGN+LFI + + T V+ +TY + CL L +++ Sbjct: 16 RDWVLYPHVHTDTATQEGE-GLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQQTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAVLN---------------TIAVAVESRDTYDMVCLYAGLALYVIL 164
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO37555 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFG6]) HSP 1 Score: 60.077 bits (144), Expect = 1.036e-9 Identity = 66/258 (25.58%), Postives = 119/258 (46.12%), Query Frame = 1 Query: 361 IKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSD----IKDISLSSFWNPKISIENIFMETKSSISHEVSYSGK----AREAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVK-MLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFI 1104 + I ++ ++ Y + FL+ WR+P L +R D + + L W P + F+ +K S H V+ K + + + RV+ + L+ FP D Q+ +I + S Y + V+ E D + ++NL + TM N +T T R RR YF+I+ + ++ +L++ SF IPP T R+AL +T++LT T ++ ++PK+ Y+ +D ++G LF+ Sbjct: 39 LSIDAINVIDMDYRMDFFLRQLWRDPRLKHRFDDTLALSNTMLDKIWVP----DTYFVNSKMSKFHSVTTINKMLSISPDGLVHYNSRVTVKASCAMNLRMFPKDVQNCNIDIESYGYSADNVQYQWENRSDNGIAVNKKIRDMPQYNLSDINVSRHFTMYVAGNWSG-----LTATFRFRRRSGYFIIHIYAPCALIVILSWISFCIPPESTAARIALGITSVLTITTILNMLNNSMPKVSYVKAVDWYLIGCFLFV 287
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO43147 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZH2]) HSP 1 Score: 58.9214 bits (141), Expect = 1.193e-9 Identity = 68/263 (25.86%), Postives = 117/263 (44.49%), Query Frame = 1 Query: 364 KIFKVDTVNEF---YSAEIFLQSKWREP-LLDNRSD---IKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKT-MINDCNI-GPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIML 1110 K+ + +NE +S +IF + W EP N S+ + + + FW P + F+ K S H+V+ Y + R++ + + LQ FP D Q + + S Y ++K P + I +Q V VEA+T I I G + + TF+ + RR +YF I + + +L++ F I P R++L +TT+L+++ V+ +PK+ Y+ +D +LGN FI L Sbjct: 35 KVVSLGGINEASMEFSMDIFFRQWWHEPRFTHNYSEPFTMAEDAGKLFWIP----DTYFINAKKSNFHKVTKENARIIIYPSGNVYYSVRLTLTLQCNMNLQLFPMDVQACPLFIESYAYTSEDIKYKWTPRGTKGIEIISNETAQ------FVLVEARTEQIATAKISGHFSQLVATFSLK--RRLEYFAITVVTPAMILVVLSWCCFWIVPDAIPARISLSVTTILSTLLLSGTVNAQMPKVSYMKAIDVFVLGNFAFIFL 285
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:101155813]) HSP 1 Score: 58.5362 bits (140), Expect = 7.955e-9 Identity = 63/242 (26.03%), Postives = 108/242 (44.63%), Query Frame = 1 Query: 367 IFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISI-ENIFMETKSSISHEVSYSGKAREAY----ITEKRRVSGGFREVLELQHFPFDCQDLSITVST-EYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLD 1074 I VD +N Y+ +IF W + L S +K + L+S KI I + F ++ S +H ++ + + + R++ L+L +FP D + S+ YP NE+ + ++ + + W LY+ V + + + E IMT SRR YF I ++ SM +L++ SF I R +L +TT+LT T ++LPK+ Y+T +D Sbjct: 88 IGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPRNEIMYRW------QRRAVEVADQRYWRLYQFAFVGMRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYITAMD 323
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrb2a (gamma-aminobutyric acid type A receptor beta2 subunit [Source:NCBI gene;Acc:101165154]) HSP 1 Score: 57.7658 bits (138), Expect = 1.530e-8 Identity = 69/320 (21.56%), Postives = 148/320 (46.25%), Query Frame = 1 Query: 271 ILICDTNKMENNSKSVNKPVARL-----VYLRCVF----------IKIFKVDTVNEF---YSAEIFLQSKWREPLLDNRSDIKDISLSS-----FWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I +CD K +N V + V RL + LR F I I +D V+E Y+ ++ Q WR+ L +++L + W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + ++ +D +E ++++ ++ ++ +K ++ P+ ++ + + R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 18 ISLCDDIKDPSNMPLVKETVDRLMKGYDIRLRPDFGGAPVAVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGE-GAVSGVDRIELPQFSIVDY-KLISKNVVFSTGSYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIF 327
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrb1 (gamma-aminobutyric acid type A receptor beta1 subunit [Source:NCBI gene;Acc:101154825]) HSP 1 Score: 56.9954 bits (136), Expect = 2.485e-8 Identity = 65/281 (23.13%), Postives = 129/281 (45.91%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ S ++ G+E+ E + ++ + + G R ++F + R YF++ ++ S++ +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 64 IDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNR--VAD----QLWVP----DTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW--QGGSNAGSVTGVENIELPQFSIIDYQTLSTKAVFATGSYPRLSLSFKLK--RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF 330
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169]) HSP 1 Score: 56.9954 bits (136), Expect = 2.964e-8 Identity = 62/281 (22.06%), Postives = 133/281 (47.33%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + ++ +E ++++ +H ++ +K ++ P+ ++ + + R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 62 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFY-WRGGVGAVTGVERIELPQFSIVDH-KLISKNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIF 326
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:101167169]) HSP 1 Score: 56.6102 bits (135), Expect = 3.197e-8 Identity = 62/281 (22.06%), Postives = 133/281 (47.33%), Query Frame = 1 Query: 361 IKIFKVDTVNEF---YSAEIFLQSKWRE--------PL---LDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKA----REAYITEKRRVSGGFREVLELQHFPFDCQDLSITV-STEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFF 1146 I I +D V+E Y+ ++ Q WR+ PL LDNR + D W P + F+ K S H V+ + + + R++ +++L+ +P D Q+ ++ + S Y ++++ + + ++ +E ++++ +H ++ +K ++ P+ ++ + + R YF++ ++ S + +L++ SF I + R+AL +TT+LT T + + LPKIPY+ +D ++G +F+ L +A ++ F Sbjct: 67 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNR--VAD----QLWVP----DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFY-WRGGVGAVTGVERIELPQFSIVDH-KLISKNVVFSTGAYPR----LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIF 331
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041829.1 (SMESG000041829.1) HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0 Identity = 298/362 (82.32%), Postives = 313/362 (86.46%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXX-XXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVS--SATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEKLFCDVC 1371 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVE+KT+INDCNIGP+ERQ MTFTCRASRRFKYFLINH +ISSM F L + P + TY RL LCMTTLLTSVTFKVAVSQNLPKIPYLTYLDK ILGNI+ IM LC WHASTS FF S S T ++ +E Y+I L+ YGL IL GL IYFDAG RRREM KD EF +++KIE EKLFCDVC Sbjct: 1 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVESKTVINDCNIGPRERQTMTFTCRASRRFKYFLINHIMISSMFFLLTFTSFSIAPQTNTYYRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKAILGNIVMIMCLCIWHASTSLFFLTKIFSDNSTITTTAIEGIEKYLIPSLVVFYGLAILAVGLTIYFDAGKRRREMIAKDVEFSEMIKKIETEKLFCDVC 362
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000064433.1 (SMESG000064433.1) HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0 Identity = 298/344 (86.63%), Postives = 324/344 (94.19%), Query Frame = 1 Query: 340 VYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEKLFCDVC 1371 VYLRCVF+KI+KVDTVNEFYS EIFLQSKWREPLLD++ ++KD++L SFWNPK+ IENIF E KSS+S EV+++ K EA+I EKRRV FRE LELQHFPFDCQDLS++V+TEY I+EV ++E P+D+SKLNT+DG+ESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHFLISSMFFLLTFTSFSIPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFND T+SSATATANVKQVETYIISC LGVYGLVILIFGLVIYFDAGSRRREMS+KDREFKRLLEKIENEKLFCDVC Sbjct: 16 VYLRCVFVKIYKVDTVNEFYSGEIFLQSKWREPLLDHKPNLKDVNLFSFWNPKLIIENIFTENKSSVSLEVTFTEKY-EAFIIEKRRVKASFRETLELQHFPFDCQDLSVSVATEYSIDEVDLVETPNDVSKLNTLDGIESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHFLISSMFFLLTFTSFSIPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDTTISSATATANVKQVETYIISCFLGVYGLVILIFGLVIYFDAGSRRREMSDKDREFKRLLEKIENEKLFCDVC 358
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041818.1 (SMESG000041818.1) HSP 1 Score: 513.457 bits (1321), Expect = 0.000e+0 Identity = 266/360 (73.89%), Postives = 299/360 (83.06%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSP-TYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEKLFCDVC 1371 ME SKS +K +LVYLRCVFIKI+KVDT+NEFYS +IFLQ+KWREPLLD+R+D+KDI+LS+FWNPK+ IEN+F E+KSS+ HEVS+S K EAYITEKRR+ FRE LELQHFPFDCQDLSI V+TEY INEVK++E PHDLSKLNTIDGMESQEWNLYEHVEVE+KT+IN+CNIGP+ERQIMTFTCRASR+FKYFLINH +ISSMFFLLTFTSFSI P+ T+ RL LCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNIL IM LC WHA TS FF T T + + E II CLLG Y + IL+ GL IYFDAG RRREM KD EF L KIE EKLFC+VC Sbjct: 1 MEVESKSNHKQSKKLVYLRCVFIKIYKVDTINEFYSGDIFLQAKWREPLLDDRTDMKDINLSTFWNPKLVIENMFQESKSSVVHEVSFSEKRHEAYITEKRRIKACFRETLELQHFPFDCQDLSIPVATEYSINEVKLVELPHDLSKLNTIDGMESQEWNLYEHVEVESKTIINECNIGPRERQIMTFTCRASRKFKYFLINHIMISSMFFLLTFTSFSITPARNTFFRLGLCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILMIMSLCIWHACTSLFFKFTTTDDTTTASVISTAEQKIIPCLLGFYSIAILVSGLAIYFDAGKRRREMLLKDAEFAEALAKIEAEKLFCEVC 360
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000041796.1 (SMESG000041796.1) HSP 1 Score: 509.22 bits (1310), Expect = 6.924e-179 Identity = 259/359 (72.14%), Postives = 299/359 (83.29%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYS-GKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEKLFCDV 1368 MENNSKS R VYLRCVFIKI+KVDTVNEFYS EIFL +KWREPLLDN+SD+KDISLS+FWNPK+SIENIF TKS+ S EVS+ G + A++ EK R+ FRE LELQHFPFDCQDLSI+V TEY I E++M E P+D+SKLNT+DG+ESQEWNLYEHVEVE K +INDCN GPKERQIMTFTCRA+RRFKYFLINHF+ISSMFFLLTF+SFSI + TYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNIL IMLLC WHA TSF+F DP+ ++ A +++ +E +I LLG Y + IL F +IY+DAGSRRREM+EKD EFK L K ENE+LFC++ Sbjct: 54 MENNSKSNQIKTKRKVYLRCVFIKIYKVDTVNEFYSGEIFLHAKWREPLLDNKSDLKDISLSTFWNPKLSIENIFQITKSTTSLEVSFDEGNNKRAFVVEKTRIKAAFRETLELQHFPFDCQDLSISVGTEYSIEELEMAENPNDISKLNTLDGIESQEWNLYEHVEVENKIVINDCNFGPKERQIMTFTCRATRRFKYFLINHFMISSMFFLLTFSSFSIISTNTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILMIMLLCIWHAVTSFWFIDPSTNTTVAMSSLTNIENILIPTLLGFYLIAILTFAFIIYYDAGSRRREMTEKDNEFKSLSIKKENERLFCEL 412
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000064435.1 (SMESG000064435.1) HSP 1 Score: 447.203 bits (1149), Expect = 2.274e-155 Identity = 227/359 (63.23%), Postives = 281/359 (78.27%), Query Frame = 1 Query: 295 MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLDNRSDIKDISLSSFWNPKISIENIFMETKSSISHEVSYSGKAREAYITEKRRVSGGFREVLELQHFPFDCQDLSITVSTEYPINEVKMLECPHDLSKLNTIDGMESQEWNLYEHVEVEAKTMINDCNIGPKERQIMTFTCRASRRFKYFLINHXXXXXXXXXXXXXXXXXPPSPTYGRLALCMTTLLTSVTFKVAVSQNLPKIPYLTYLDKTILGNILFIMLLCFWHASTSFFFNDPTVSSATATANVKQVETYIISCLLGVYGLVILIFGLVIYFDAGSRRREMSEKDREFKRLLEKIENEKLFCDVC 1371 ME +S+S +PV + +YLRCVFIKIFKVDTVNE Y AEIFLQ+KWREPLLDN D K+I L +FWNPK+ IENIF E K S+S EVSYS K AY+ EKRRV F E+LEL+HFPFDCQDLSI V+TEY + V ++E PHD SKLN DG+ESQEW+LY HVEV + NDCNIGP+ER I+ FTCRASRRF+YFLINHFLISS+FFLLTFTSFSI + +GRL LCMTTLLTSVTFKVAVSQ+LPKIPYLTYLDKTILGNI IM +C WHA T+ F+ + ++S+ ++ VE +I +L YGL ++++ ++IY+DAG+RRREM+ KD EF++ +K+ + ++ CDVC Sbjct: 1 MEEDSESNQEPVQKKIYLRCVFIKIFKVDTVNENYYAEIFLQAKWREPLLDNECDYKNIDLKNFWNPKLRIENIFTENKVSVSLEVSYSEKEGVAYLMEKRRVKASFHEILELKHFPFDCQDLSIIVTTEYSSDYVDLMESPHDPSKLNVSDGIESQEWSLYSHVEVLKDRLKNDCNIGPEERSILIFTCRASRRFRYFLINHFLISSIFFLLTFTSFSIISTNAFGRLQLCMTTLLTSVTFKVAVSQSLPKIPYLTYLDKTILGNIFMIMCVCMWHAGTAIFYFNTSISTDATVERIRNVELILIPSILSFYGLAVMVYSIIIYYDAGTRRREMAVKDAEFEKAWKKVRSVEIPCDVC 359 The following BLAST results are available for this feature:
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020055 ID=SMED30020055|Name=Neur_chan_LBD domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1542bpback to top protein sequence of SMED30020055-orf-1 >SMED30020055-orf-1 ID=SMED30020055-orf-1|Name=SMED30020055-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=360bp MENNSKSVNKPVARLVYLRCVFIKIFKVDTVNEFYSAEIFLQSKWREPLLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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