TNF receptor-associated factor
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30020033 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 83.5741 bits (205), Expect = 1.042e-16 Identity = 91/406 (22.41%), Postives = 174/406 (42.86%), Query Frame = 1
Query: 85 FDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSH-SIKCPYAEVGCI----ESRMDTHNIKDHL------TNETYSHTNLLI------------------ESIRNLSNEINFLKENAIRNKEMIEN-----LQIENI---------ELQNEINMINIVKMEMKTLQDGMKELKN---DSQQKNKLIYEMMRKNS--NEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
F + D C C +L Q CG R+C C+ L+ + C C++ I ++ + D+ ++IL++++ C ++ L M H+ H C + E+ C+ + ++ +++DH+ T SH + +SI++L N+I + R KEM+ N L ++ + EL EI E +++ ++ L+N + + +K ++ R Q+ ++ S+ +I + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 43 FVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKC----TACQESIVKDK-VFKDNCCKREILALQIYCRNESRGCAEQL--MLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 439
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 79.7221 bits (195), Expect = 2.057e-15 Identity = 75/326 (23.01%), Postives = 131/326 (40.18%), Query Frame = 1
Query: 328 ELFCQFSDSLIVMADHMKSHSIKCPYAEVGC---------IESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAI---------------------RNKEMIEN-----LQIENI---------ELQNEINMINIVKMEMKTLQDGMKELKN---DSQQKNKLIYEMMRKNS--NEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
E C S + M K CP V C + S IK H + H NLL E +L +++ L+ ++ R KEM+ N L ++ + EL EI E +++ ++ L+N + + +K ++ R Q+ ++ S+ +I + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 174 EATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 497
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 79.7221 bits (195), Expect = 2.057e-15 Identity = 75/326 (23.01%), Postives = 131/326 (40.18%), Query Frame = 1
Query: 328 ELFCQFSDSLIVMADHMKSHSIKCPYAEVGC---------IESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAI---------------------RNKEMIEN-----LQIENI---------ELQNEINMINIVKMEMKTLQDGMKELKN---DSQQKNKLIYEMMRKNS--NEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
E C S + M K CP V C + S IK H + H NLL E +L +++ L+ ++ R KEM+ N L ++ + EL EI E +++ ++ L+N + + +K ++ R Q+ ++ S+ +I + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 174 EATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 497
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF1 (TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]) HSP 1 Score: 78.9518 bits (193), Expect = 2.385e-15 Identity = 97/407 (23.83%), Postives = 171/407 (42.01%), Query Frame = 1
Query: 175 CYHCI-EKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCP--ELFCQFSDSLIVMADH----MKSHS------IKCPYAEVGC-IESRMDT--HNIKD-HLTNETYSHTNLLIESIRNLSNEI-------NFLKENAIRNKE----MIENL--------QIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRY----FKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
C C+ E NG ++ CPK G + I+ + A+ ++ + CP + C F S + +H SH +K A +GC +ES N+ D L +L ++ R +E +F+KE + E + EN+ + ++ L I+ + + + +L+ + EL+ QK++ + ++ E+ L+ +EE + F F WKI N+++ +S G +S +FY+ GYK+ RLY++ G + HL ++ V++ GEYD +L WP VT L+DQ + + ++ID + A+F RP Q + C K+ V D ++FLKC V+
Sbjct: 38 CAGCLSENPRNGEDQICPKCRGEDLQSISPGSRLRTQEKAHPEVAEAGIGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKL-----------EQSLRLMEEAS--------FDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLN--GDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQ---------NNREHAIDAFRPDLSSASFQRP-QSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVE 413
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF1 (TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]) HSP 1 Score: 78.9518 bits (193), Expect = 2.385e-15 Identity = 97/407 (23.83%), Postives = 171/407 (42.01%), Query Frame = 1
Query: 175 CYHCI-EKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCP--ELFCQFSDSLIVMADH----MKSHS------IKCPYAEVGC-IESRMDT--HNIKD-HLTNETYSHTNLLIESIRNLSNEI-------NFLKENAIRNKE----MIENL--------QIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRY----FKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
C C+ E NG ++ CPK G + I+ + A+ ++ + CP + C F S + +H SH +K A +GC +ES N+ D L +L ++ R +E +F+KE + E + EN+ + ++ L I+ + + + +L+ + EL+ QK++ + ++ E+ L+ +EE + F F WKI N+++ +S G +S +FY+ GYK+ RLY++ G + HL ++ V++ GEYD +L WP VT L+DQ + + ++ID + A+F RP Q + C K+ V D ++FLKC V+
Sbjct: 38 CAGCLSENPRNGEDQICPKCRGEDLQSISPGSRLRTQEKAHPEVAEAGIGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKL-----------EQSLRLMEEAS--------FDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLN--GDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQ---------NNREHAIDAFRPDLSSASFQRP-QSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVE 413
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80]) HSP 1 Score: 67.781 bits (164), Expect = 5.424e-12 Identity = 80/352 (22.73%), Postives = 136/352 (38.64%), Query Frame = 1
Query: 106 DLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCP--ELFCQFSDSLIVMADHMKS----HSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNE----------INFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKN--------------DSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAP-FEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
D C IC+ L + C YC C E NE P C+ +I D K+IL++ V C C + L + DH+ S+KC ++ ++ H K L S N ++IR+ E I+ + + ++ +E ++ N N+ V T G + ++ D K YE+M ++ + R+ S E T T+ + P WKI+ + Q +++K G +S F SH GYKM +G + + +Y +++ GE+D L+WP ++ + I L+DQ
Sbjct: 15 DCTCPICEQALRDPIKLNCDHHYCRQCFE-----NENRTP-GCAACQTIIQPEL-CQHDRAKQKQILALPVVCTFESSGCPWDGQLGTLHDHLSECTFKSSLKCEKCGRQFAKNDLEKHRAKCELNRAVCSFCN---KTIRDSDRERHPKTCPQVIISCPFQCGLTDRPRLE-IEAHCPSCPNVDNVCPFVPYGC-TFAGGKESIQQHLSDEPVRHLMYLCDEITDLKGTYELMERDMGSFNDRQTRILSAAE------TCTEMFGPQLIWKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLYVLLLKGEFDPTLEWPFHRAIKISLLDQ 348
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586]) HSP 1 Score: 58.5362 bits (140), Expect = 3.143e-9 Identity = 30/88 (34.09%), Postives = 46/88 (52.27%), Query Frame = 1
Query: 847 LIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ-----ILGSIYVKE 1095
++ +K + R YSQ FYSH GYKM PYG + + V+ ++ GE+DD+L+WP VT ++ + +IYV E
Sbjct: 171 VVKATKNKSHRSIYSQPFYSHGYGYKMMAVAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSILSDDKKELLTKTIYVNE 258
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf6 (gene:FBgn0265464 transcript:FBtr0071188) HSP 1 Score: 73.9442 bits (180), Expect = 7.106e-14 Identity = 67/332 (20.18%), Postives = 139/332 (41.87%), Query Frame = 1
Query: 115 CSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCP--ELFCQFSDSLIVMADHMKS---------HSIKCPYAEVGC-IESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMR--KNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLV 1062
C+IC + L+ CG R+C C+ ++ N + CP + K ++ DI D++ ++I +K CP L C S I + H+ S KCP+A++ C R +T+ +++HL + H L++++ + + + + +EN + + + ++T+ + L+ ++++ + M + + + +Q ++ R + G + W+IE + L+ + + YS Y+ +GYK RL I P + L ++ ++ E D LDWP + + +V
Sbjct: 104 CAICIDWLNEPVLTSCGHRFCRSCLTAWMQKNNQCCPMD----NKRLSAEHDIFPDNYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEKCPFAKIKCDFVGRPETNQLEEHLKADMPHHMQLMLQAFQQTAI-ATWQPHKPSTSGAAVENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQQAPVDPRYSN------GTIV---------WRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKPHV-----LSLHVHLMQSENDYHLDWPFKGRIKLCMV 410
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0334401) HSP 1 Score: 55.8398 bits (133), Expect = 3.825e-8 Identity = 67/273 (24.54%), Postives = 113/273 (41.39%), Query Frame = 1
Query: 367 ADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQIL--GSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDY 1179
AD + H+ +CP A + C + R D I E +H L + ++L+ +F KE R K + L+ ++E ++ +V + S+Q ++ M K++ ++ I N T T WKI + S + +++ + S FY+ GYK++ + G E H+ VY V+ GEYD +L WP + +T L +Q G V ESF + F+ RPS PD + +
Sbjct: 218 ADTLPLHAAQCPRAPLACPQ-RCDAGPIPR---GELEAH---LRDECQSLAVSCSF-KEAGCRFKGPRQMLEA-HLESNAAAHLSLMVAL--------------SSRQGQQI---QMLKSAVSKLSI-------------NYTGTLL-----WKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQ----RPSNE-PDQLGF 441
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0077429) HSP 1 Score: 55.8398 bits (133), Expect = 4.543e-8 Identity = 67/273 (24.54%), Postives = 113/273 (41.39%), Query Frame = 1
Query: 367 ADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQIL--GSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDY 1179
AD + H+ +CP A + C + R D I E +H L + ++L+ +F KE R K + L+ ++E ++ +V + S+Q ++ M K++ ++ I N T T WKI + S + +++ + S FY+ GYK++ + G E H+ VY V+ GEYD +L WP + +T L +Q G V ESF + F+ RPS PD + +
Sbjct: 227 ADTLPLHAAQCPRAPLACPQ-RCDAGPIPR---GELEAH---LRDECQSLAVSCSF-KEAGCRFKGPRQMLEA-HLESNAAAHLSLMVAL--------------SSRQGQQI---QMLKSAVSKLSI-------------NYTGTLL-----WKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQ----RPSNE-PDQLGF 450
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 80.4925 bits (197), Expect = 8.801e-16 Identity = 94/457 (20.57%), Postives = 167/457 (36.54%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCP-------------------------------------------KNIGNCK----KLINFNRDITIDHFANKK---ILSIKVKCP--------------ELFCQFSDSLI------VMADHMKSH--------SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEM---IENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+D FD L C IC L A Q CG R+C CI K + + CP K++ C+ + I H K L + CP E FC F++++ ++ D + H + C ++ GC E +M + + H+ T H + E FL+ + N M +L ++ K E+ L++ + EL+ ++++ I E+ N N+ + ++L SLEE L ++ + W++EN S + + G +S FY+ GYK+ RL++ P + + + L V+ + GE+D L WP+ + + ++DQ+ G +++ + AF RP+ R+P Y
Sbjct: 57 YDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLALHCDTDCLKAPVACTFSTFGCRE-KMTRNELAQHMQEFTQMHMRYMAE----------FLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTELRRKLVSLEESTR-ELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHIEVMETKPDLQ-----AFQRPTVMRNPKGFGY 494
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 80.4925 bits (197), Expect = 8.801e-16 Identity = 94/457 (20.57%), Postives = 167/457 (36.54%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCP-------------------------------------------KNIGNCK----KLINFNRDITIDHFANKK---ILSIKVKCP--------------ELFCQFSDSLI------VMADHMKSH--------SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEM---IENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+D FD L C IC L A Q CG R+C CI K + + CP K++ C+ + I H K L + CP E FC F++++ ++ D + H + C ++ GC E +M + + H+ T H + E FL+ + N M +L ++ K E+ L++ + EL+ ++++ I E+ N N+ + ++L SLEE L ++ + W++EN S + + G +S FY+ GYK+ RL++ P + + + L V+ + GE+D L WP+ + + ++DQ+ G +++ + AF RP+ R+P Y
Sbjct: 57 YDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLALHCDTDCLKAPVACTFSTFGCRE-KMTRNELAQHMQEFTQMHMRYMAE----------FLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTELRRKLVSLEESTR-ELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHIEVMETKPDLQ-----AFQRPTVMRNPKGFGY 494
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 80.4925 bits (197), Expect = 8.801e-16 Identity = 94/457 (20.57%), Postives = 167/457 (36.54%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCP-------------------------------------------KNIGNCK----KLINFNRDITIDHFANKK---ILSIKVKCP--------------ELFCQFSDSLI------VMADHMKSH--------SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEM---IENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+D FD L C IC L A Q CG R+C CI K + + CP K++ C+ + I H K L + CP E FC F++++ ++ D + H + C ++ GC E +M + + H+ T H + E FL+ + N M +L ++ K E+ L++ + EL+ ++++ I E+ N N+ + ++L SLEE L ++ + W++EN S + + G +S FY+ GYK+ RL++ P + + + L V+ + GE+D L WP+ + + ++DQ+ G +++ + AF RP+ R+P Y
Sbjct: 57 YDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLALHCDTDCLKAPVACTFSTFGCRE-KMTRNELAQHMQEFTQMHMRYMAE----------FLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTELRRKLVSLEESTR-ELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHIEVMETKPDLQ-----AFQRPTVMRNPKGFGY 494
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]) HSP 1 Score: 77.411 bits (189), Expect = 7.413e-15 Identity = 80/340 (23.53%), Postives = 142/340 (41.76%), Query Frame = 1
Query: 307 SIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGC-----------IESRMDTHN---IKDHLTNETYSHTNL----------LIESIRNLSNEINFLKENAIRNKEMIE-NLQIEN------------------IELQ-NEINMINIVKMEMKTLQDGMKELKN-----DSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS 1152
+ V CP C FS ++ + SH CP A+V C + M H +HL +T L L+E + L + + L E + +EM E N Q+E +E++ E+ + ++ E++TL+ ++ +++ DS N + +Q+ L S+ ++ L F WKI + + ++ + YSQ FY+ GYKM R+Y++ G + + HL ++FVV+ GEYD +L WP + VT+ L+DQ ++ ++FK + ++F RP+
Sbjct: 201 AFPVACPN-HCSFSS---ILRSELSSHQHDCPKAQVTCSFIRYGCSYKGLNQEMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEVERQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRPLRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLAEMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLMDQGPARKHLGDAFKPDPSS----SSFRRPT 530
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: unm_sa808 (un-named sa808 [Source:ZFIN;Acc:ZDB-GENE-120727-21]) HSP 1 Score: 71.633 bits (174), Expect = 1.429e-13 Identity = 55/225 (24.44%), Postives = 111/225 (49.33%), Query Frame = 1
Query: 418 CIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRN-KEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLK----SLEEINEGNL---TNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
C+ S+++ I +H + H NLL+ I + + L++ + + ++L+++ ++ + ++N E++ M+ S ++++L + + SN+ +E+++ ++ E+ EG L + T F F W+I + ++ + G +S +FY+ GYKM L I G HL ++FVV+ G D +L WP N+ VT+ L+DQ
Sbjct: 1 CLPSKVEKEKIHEHERACAHEHLNLLLHYIMGMKVSLEGLEKTKVADLGRRCQDLEVKAGTFEDVVCVLN---REVERFATTMEA----SNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEM-EGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQ 217
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 83.5741 bits (205), Expect = 1.186e-16 Identity = 101/447 (22.60%), Postives = 172/447 (38.48%), Query Frame = 1
Query: 115 CSICKNILHIASQNICGCRYCYHCIEKYLNGN-----------------------------EKFCPKNIGNCKKLINFN-------RDITIDHFAN----------KKILS--IKVKCP--ELFCQFSDSLIVMADHMKSHSIKCPYAEVGC---------IESRMDTHNIKDHLTNETYSHTNLLIE---------------------SIRNLSNEINFLKENAIRNKEMIENLQIENIELQ----NEINMINIVKMEMKTLQ------DGMKELKNDSQQKNKLI-YEMMRKNS--------NEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
C C+ +L Q CG R+C C+ L+ + FC CK+LI D + + +K LS I+ C E C+F + + + + K + CP + C + S IK H + H NL+ E SI+ L N++ + R+KE + N + I+LQ + + + + E++ L+ DGMK N +N+L E+M KN+ QI ++ S+ +I + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + V++ L+DQ ++ ++FK + FK
Sbjct: 48 CEKCRLVLCNPRQTECGHRFCETCMNAILSSTSPQCMACEDNITKDKVFKDNCCRREVLALQMFCRNETRGCKELITLGNLLIHLKSDCQFEELSCPRADCKEKVIRKDLSDHIEKTCKYRETPCKFCRNQVPLVEMQKHEDVDCPSVVISCPHMCSVKSLLRSEGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKS--NYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFK 490
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: TRAF2 (TNF receptor associated factor 2 [Source:NCBI gene;Acc:100494415]) HSP 1 Score: 80.4925 bits (197), Expect = 8.212e-16 Identity = 94/387 (24.29%), Postives = 154/387 (39.79%), Query Frame = 1
Query: 64 LNKFDF---VFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEK---YLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELF--CQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTH--NIKDH--------LTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIEN---LQIENIELQNEI--------------NMINIVKMEMK---------TLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLE--------EINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
LN+ F + + L LCS CKN+L Q CG RYC HC+ K ++ N P+ C++ I++ H + KCP L C ++I A+ +CP ++ C ++ + +IK H +T E + E +R + A+ EM+EN L+ EN L + N + +M +K T ++ + L + ++ + E+ R+ +E+ L E + E L+ + F WKI + + G +S FY++ GYKM L I G HL ++FVV+ G D +L WP N+ VT+ L+DQ
Sbjct: 17 LNQPGFKKEILGTKLEVKYLCSDCKNLLRRPLQAQCGHRYCSHCLNKIIRWVARNWGGVPECPAVCERSDWTGALISVGH---------EGKCPYLLAPCPACKTIIRAANRDLHSERECPERKLNCRYCKLSFYFPDIKAHDEICPKFPMTCEGCGRKKIPREKVRLFV--CMPCRYAAVGCTEMVENDKCLEHENKSLAEHLAKGSPAPPANAPPNNSAKVAEMLLKFDTLDKKNTTFENIVSVLNREVERSSHAAEELARQLRAADTRLERTLGQKELIVAELETRMQESELST--YDGVFIWKISEFGKKRQDAINGRCPAMFSPPFYTNKYGYKMCLRIYLNGDGTGRNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLDQ 390
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: TRAF2 (TNF receptor associated factor 2 [Source:NCBI gene;Acc:100494415]) HSP 1 Score: 78.5666 bits (192), Expect = 4.358e-15 Identity = 96/410 (23.41%), Postives = 158/410 (38.54%), Query Frame = 1
Query: 64 LNKFDF---VFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEK---YLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELF--CQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTH--NIKDH--------LTNETYSHTNLLIESIR----NLSNEINF---LKENAIRNKEMIEN---LQIENIELQNEINMI-----------NIVKMEMKTLQ-DGMKELKNDSQQKNKLIYE--------MMRKNSNEQILIEKRLKSLEEINEGNLTNTK---------------------------FYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
LN+ F + + L LCS CKN+L Q CG RYC HC+ K ++ N P+ C++ I++ H + KCP L C ++I A+ +CP ++ C ++ + +IK H +T E + E +R + S I + A+ EM+EN L+ EN L + + N + + M +L G D+ K +E + ++S+ + ++L++ +E E T + + F WKI + + G +S FY++ GYKM L I G HL ++FVV+ G D +L WP N+ VT+ L+DQ
Sbjct: 17 LNQPGFKKEILGTKLEVKYLCSDCKNLLRRPLQAQCGHRYCSHCLNKIIRWVARNWGGVPECPAVCERSDWTGALISVGH---------EGKCPYLLAPCPACKTIIRAANRDLHSERECPERKLNCRYCKLSFYFPDIKAHDEICPKFPMTCEGCGRKKIPREKVRLFVCSFSRNITLSLPCRYAAVGCTEMVENDKCLEHENKSLAEHLAKVWDYIQHGRKEQNDLSVRMGSLSVQGSPAPPFDTLDKKNTTFENIVSVLNREVERSSHAAEELARQLRAAQEKVEALTTKVRQLERTLGQKELIVAELETRMQESELSTYDGVFIWKISEFGKKRQDAINGRCPAMFSPPFYTNKYGYKMCLRIYLNGDGTGRNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLDQ 417
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 77.0258 bits (188), Expect = 1.619e-14 Identity = 80/330 (24.24%), Postives = 141/330 (42.73%), Query Frame = 1
Query: 307 SIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDT------HNIKDHLTNETYSHTNLLIE---------------------SIRNLSNEINFLKENAIRNKEMIENLQIENIELQ----NEINMINIVKMEMKTLQ------DGMKELKNDSQQKNKLI-YEMMRKNS--------NEQILIEKRLKSLEEINEGN-------LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
S+ + CP + C ++ + +H ++C A C R IK H + H NL+ E SI+ L N++ + R+KE + N + I+LQ + + + + E++ L+ DGMK N +N+L E+M KN+ QI ++ S+ +I + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + V++ L+DQ ++ ++FK + FK
Sbjct: 194 SVVISCPHM-CSVKS---LLRSELNAHLLECVNAPSTCSFKRYGCTFKGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQILHNQMCSFEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKS--NYESLQNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFK 515
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823]) HSP 1 Score: 73.559 bits (179), Expect = 1.887e-13 Identity = 60/280 (21.43%), Postives = 124/280 (44.29%), Query Frame = 1
Query: 388 SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSN---------EINFLKENAIRN-KEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
I C Y E GC E +M +++ HL T +H ++ +++R+ S+ +I+F + + + + QN+ E + L++ +++L+ +++ I E++ K + + + ++ ++ G + + + F W+I N + L+ + +SQ FY+ GYK+ RL++ P + Y L V+ + GEYD +L WP+ + + ++DQ G + ++ AF RP+ R+P Y
Sbjct: 241 PIPCMYYEFGCTE-KMQRNDLARHLQEFTQAHMRMMAQTLRSFSSSVTPTSHMPDISFCDPSQFEPAPPSVATVHSSHTPSQNDCTQ------ETRNLRETIEQLEGRLVRQDHQIRELIAKMETQCTYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVH--TMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELL--AFQRPTVARNPKGFGY 509 HSP 2 Score: 60.8474 bits (146), Expect = 2.371e-9 Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 64 LNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGC--IESRMDTHNIKDH 459
+ +D FD L C IC L A Q CG R+C CI K + CP + N + N + D+FA ++ILS++VKCP C + L H++ H ++C +A V C +S ++++ H
Sbjct: 55 VQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCP--VDNESLMEN---QLFPDNFAKREILSLRVKCPSQGCTETMEL----RHLERHLVRCDFAGVECSQCQSSFPKYSLQKH 179
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 80.8777 bits (198), Expect = 6.286e-16 Identity = 99/463 (21.38%), Postives = 175/463 (37.80%), Query Frame = 1
Query: 85 FDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKV-------KCPELF------------CQFSDSLIVMAD--------------------------HMKSH----------SIKCPYAEVGC---------IESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAI---------------------RNKEMIEN-----LQIENI---------ELQNEINMI-------NIVKMEMKTLQDGMKELKN------DSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
F + D C C+ +L Q CG R+C C+ L+ + C C++ I + D+ ++IL+++V C E CQF + + AD H KS CP V C + S IK H + H NLL E +L +++ L+ ++ R KEM+ N L ++ + EL EI + +K +++LQ+ + EL++ + + L+ + ++ + + RL ++ + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 42 FVKTVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTA----CQESI-IKDKVFKDNCCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIKLQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMD-LRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 496
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 80.8777 bits (198), Expect = 6.286e-16 Identity = 99/463 (21.38%), Postives = 175/463 (37.80%), Query Frame = 1
Query: 85 FDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKV-------KCPELF------------CQFSDSLIVMAD--------------------------HMKSH----------SIKCPYAEVGC---------IESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAI---------------------RNKEMIEN-----LQIENI---------ELQNEINMI-------NIVKMEMKTLQDGMKELKN------DSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
F + D C C+ +L Q CG R+C C+ L+ + C C++ I + D+ ++IL+++V C E CQF + + AD H KS CP V C + S IK H + H NLL E +L +++ L+ ++ R KEM+ N L ++ + EL EI + +K +++LQ+ + EL++ + + L+ + ++ + + RL ++ + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 42 FVKTVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTA----CQESI-IKDKVFKDNCCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIKLQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMD-LRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 496
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 77.0258 bits (188), Expect = 1.036e-14 Identity = 68/295 (23.05%), Postives = 128/295 (43.39%), Query Frame = 1
Query: 397 CPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAI---------------------RNKEMIEN-----LQIENI---------ELQNEINMI-------NIVKMEMKTLQDGMKELKN------DSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
C + GC+ + IK H + H NLL E +L +++ L+ ++ R KEM+ N L ++ + EL EI + +K +++LQ+ + EL++ + + L+ + ++ + + RL ++ + L + WKI + + ++ +G YSQ FY+ GYKM R+Y++ G + + HL ++FV++ GEYD +L WP + VT+ L+DQ ++ ++FK + FK
Sbjct: 231 CSFKRYGCV-FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMD-LRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFK 521
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf2 (TNF receptor-associated factor 2 [Source:MGI Symbol;Acc:MGI:101835]) HSP 1 Score: 75.8702 bits (185), Expect = 2.367e-14 Identity = 62/249 (24.90%), Postives = 109/249 (43.78%), Query Frame = 1
Query: 370 DHMKSHS---IKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTL--------------QDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVD 1065
DH+++ S + C + VGC E ++T N++DH H LL+ S L + E+++ QI ++ N++ ++ E++ + QD ++ L N QQ + I L + + LE+ L + + F WKI + ++ ++ G +S +FY+ GYKM L + G HL ++FVV+ G D +L WP N+ VT+ L+D
Sbjct: 211 DHVRACSKCRVLCRFHTVGCSE-MVETENLQDHELQRLREHLALLLSSFLEAQASPGTLNQV---GPELLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDKIEALSNKVQQLERSIG-----------LKDLAMADLEQ-KVSELEVSTYDGVFIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLD 443
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf2 (TNF receptor-associated factor 2 [Source:MGI Symbol;Acc:MGI:101835]) HSP 1 Score: 75.8702 bits (185), Expect = 2.525e-14 Identity = 62/249 (24.90%), Postives = 109/249 (43.78%), Query Frame = 1
Query: 370 DHMKSHS---IKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTL--------------QDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVD 1065
DH+++ S + C + VGC E ++T N++DH H LL+ S L + E+++ QI ++ N++ ++ E++ + QD ++ L N QQ + I L + + LE+ L + + F WKI + ++ ++ G +S +FY+ GYKM L + G HL ++FVV+ G D +L WP N+ VT+ L+D
Sbjct: 204 DHVRACSKCRVLCRFHTVGCSE-MVETENLQDHELQRLREHLALLLSSFLEAQASPGTLNQV---GPELLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDKIEALSNKVQQLERSIG-----------LKDLAMADLEQ-KVSELEVSTYDGVFIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLD 436
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q6IWL4|TRAF6_DANRE (TNF receptor-associated factor 6 OS=Danio rerio OX=7955 GN=traf6 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.643e-15 Identity = 94/457 (20.57%), Postives = 167/457 (36.54%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCP-------------------------------------------KNIGNCK----KLINFNRDITIDHFANKK---ILSIKVKCP--------------ELFCQFSDSLI------VMADHMKSH--------SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEM---IENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+D FD L C IC L A Q CG R+C CI K + + CP K++ C+ + I H K L + CP E FC F++++ ++ D + H + C ++ GC E +M + + H+ T H + E FL+ + N M +L ++ K E+ L++ + EL+ ++++ I E+ N N+ + ++L SLEE L ++ + W++EN S + + G +S FY+ GYK+ RL++ P + + + L V+ + GE+D L WP+ + + ++DQ+ G +++ + AF RP+ R+P Y
Sbjct: 57 YDVEFDPPLESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQKCPVDNEVLLEEQLFPDNFAKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVCEYCEMELIRDQLALHCDTDCLKAPVACTFSTFGCRE-KMTRNELAQHMQEFTQMHMRYMAE----------FLRSQTLNNCTMPSAAAHLSSDDRGASARSPDSCQCKQELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTELRRKLVSLEESTR-ELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHIEVMETKPDLQ-----AFQRPTVMRNPKGFGY 494
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q13077|TRAF1_HUMAN (TNF receptor-associated factor 1 OS=Homo sapiens OX=9606 GN=TRAF1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.145e-14 Identity = 97/407 (23.83%), Postives = 171/407 (42.01%), Query Frame = 1
Query: 175 CYHCI-EKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCP--ELFCQFSDSLIVMADH----MKSHS------IKCPYAEVGC-IESRMDT--HNIKD-HLTNETYSHTNLLIESIRNLSNEI-------NFLKENAIRNKE----MIENL--------QIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRY----FKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
C C+ E NG ++ CPK G + I+ + A+ ++ + CP + C F S + +H SH +K A +GC +ES N+ D L +L ++ R +E +F+KE + E + EN+ + ++ L I+ + + + +L+ + EL+ QK++ + ++ E+ L+ +EE + F F WKI N+++ +S G +S +FY+ GYK+ RLY++ G + HL ++ V++ GEYD +L WP VT L+DQ + + ++ID + A+F RP Q + C K+ V D ++FLKC V+
Sbjct: 38 CAGCLSENPRNGEDQICPKCRGEDLQSISPGSRLRTQEKAHPEVAEAGIGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKL-----------EQSLRLMEEAS--------FDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLN--GDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQ---------NNREHAIDAFRPDLSSASFQRP-QSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVE 413
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B5DF45|TRAF6_RAT (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.234e-14 Identity = 98/439 (22.32%), Postives = 169/439 (38.50%), Query Frame = 1
Query: 64 LNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADH----------------------MKSHSIK-CPYAEVGCIESRM-------DTHNIKDHLTN--ETYSHTNLLIESIRN------------LSNEINFLKENAIRN---KEMIENLQIENIELQNEINMINI-------------VKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILI---EKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+ +D FD L C IC L A Q CG R+C CI K + CP + I + D+FA ++ILS+ VKCP C L + DH + H I+ CP +V C+ + + H+ L N Y T L+ E + N + + E RN + + EN Q+ L ++ +N+ + E ++ +K+L+ +++ I E+ K + + + ++ ++SLE+ + + + WKI N + + +S FY+ GYK MRL++ P + Y L V+ + GEYD L WP + + ++DQ ++++ + + AF RP+ R+P Y
Sbjct: 53 IQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVD-----NEILLENQLFPDNFAKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDCPRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAPVPCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHNVNLSLRPCDASSPSRGCRPEDPNYEETVKQLEGRLVRQDHQIRELTAKMETQSMHVSELKRTIRSLED-KVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH--TMQGEYDSHLPWPFQGTIRLTILDQ--SEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFGY 481
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B6CJY4|TRAF6_CERAT (TNF receptor-associated factor 6 OS=Cercocebus atys OX=9531 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.730e-14 Identity = 93/434 (21.43%), Postives = 165/434 (38.02%), Query Frame = 1
Query: 64 LNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESR-------MDTHNIKDHLTNET-----------------------------YSHTNLLIESIRN------------LSNEINFLKENAIRN---KEMIENLQIENIELQNEINMINIVK-----MEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+ +D FD L C IC L A Q CG R+C CI K + CP + I + D+FA ++ILS+ VKCP C L H++ H C +A V C + + ++ H +KD + Y +T L+ E + N + E RN + + EN Q L ++ ++++ E++ Q+ + +L+ +++ I E+ K + + + +++ + + + + + WKI N + + +S FY+ GYK MRL++ P + Y L V+ + GEYD L WP + + ++DQ V+++ + + AF RP+ R+P Y
Sbjct: 53 IQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMEL----RHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYVSEVRNFQETIHQLEGRLVRQDHQIRELTAKMETQSTYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVH--TMQGEYDSHLPWPFQGTIRLTILDQ--SEAPVRQNHEEIMDAKPDLLAFQRPTIPRNPKGFGY 473
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B6CJY5|TRAF6_MACMU (TNF receptor-associated factor 6 OS=Macaca mulatta OX=9544 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.165e-14 Identity = 93/434 (21.43%), Postives = 165/434 (38.02%), Query Frame = 1
Query: 64 LNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESR-------MDTHNIKDHLTNET-----------------------------YSHTNLLIESIRN------------LSNEINFLKENAIRN---KEMIENLQIENIELQNEINMINIVK-----MEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+ +D FD L C IC L A Q CG R+C CI K + CP + I + D+FA ++ILS+ VKCP C L H++ H C +A V C + + ++ H +KD + Y +T L+ E + N + E RN + + EN Q L ++ ++++ E++ Q+ + +L+ +++ I E+ K + + + +++ + + + + + WKI N + + +S FY+ GYK MRL++ P + Y L V+ + GEYD L WP + + ++DQ V+++ + + AF RP+ R+P Y
Sbjct: 53 IQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD-----NEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMEL----RHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYVSEVRNFQETIHQLEGRLVRQDHQIRELTAKMETQSTYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVH--TMQGEYDSHLPWPFQGTIRLTILDQ--SEAPVRQNHEEIMDAKPDLLAFQRPTIPRNPKGFGY 473
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1E101 (TRAF-6 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.491e-34 Identity = 128/428 (29.91%), Postives = 202/428 (47.20%), Query Frame = 1
Query: 61 LLNKFDF-VFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKK-LINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHM---KSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINF----LKENAIRNKEMI---------ENLQIENI--ELQNEINMINI-------VKMEMKTL----QDGMKELKNDSQ--------QKNKL-------IYEMMRKNSNEQILIEKRLKSLEEINE---GNLTNTKFYAP-----FEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYC 1182
LL+K++ D ++++DLLC +C ++ A ++ CGC YCY CI YL+ N +CP + CK+ +N D+ + + +I I VKCP + C ++ L+ + +H+ S++CP +GC E + + HLT++ HT L++ L +EIN KE+ KE++ + Q+E + EL+N+ NMI + VK EM TL + +K+LK+D Q KN L I ++ E I+ + S E E NL P F W+IE S+ K YS SF SH + + LYI YG +L ++ V++ GE DD L+WPM + VT+ +++Q + F+ ++ R K AFDRP DYC
Sbjct: 12 LLSKYNVKRVDESVNNDLLCILCNKLMRDACESACGCHYCYTCIRIYLSQNHNYCPGDKTECKEDYLNLEGDVFRNIRLSTRISRIVVKCPNIRCNYTSELLRLKEHLDKCTPESVECPCVTIGCEEEPLLKDEMAKHLTDQVLRHTQLIMSFCNELKSEINHNNETTKEDISHLKEVLRVQKALNDEKTAQMEFLIEELRNKDNMILVLSQDIQEVKNEMITLLTSKESELKKLKSDIQIFRQEIEFMKNDLEVVGSTDIKNQVKDLKKEIFGIKMNIDSNNEERERKMNNLIRLNKLCPNVDMDFMWRIEEYSK-----KRRTVTDVYSDSFQSHNYKFCLNLYI--YG------DNLGLWCVIMKGEKDDFLEWPMRRTVTLSIIEQDSLKTHKTTVFQYDTYQRN-KKAFDRPKDERN---DYC 422
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: I1ZID8 (TNF receptor associated factor-2 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.805e-25 Identity = 64/196 (32.65%), Postives = 111/196 (56.63%), Query Frame = 1
Query: 46 EEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKL-INFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIK---CPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMI 621
E+ LL ++F + + D+L C +CKN+L A Q+ CGCR+C CI +Y++ +CP CK+ + +I D+ N+KI ++VKCPE C+ L+ + +H++ ++K CP+ +GC + +M ++ +HL N T+ H+ L+I+ I N+ N+ L + +E I NL + + QNEI M+
Sbjct: 4 EKINRLLITYNFEVEGGVPDNLKCDLCKNLLVNACQSRCGCRFCSKCIMEYVSRGNLYCPGGTSECKEENLTICSNIHTDYRVNRKIAKMRVKCPEETCKVYCELVDIEEHLRLCTMKSQNCPFFVLGCNQPKMVIQDLTNHLQNGTFQHSKLIIDIISNMRNDFFGLTTKEVELREDI-NLIKNHFQSQNEIMML 198
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1DBK6 (TRAF-4 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.262e-24 Identity = 111/401 (27.68%), Postives = 175/401 (43.64%), Query Frame = 1
Query: 67 NKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKD---HLTNET------------------YSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQ----IENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKL-IYEMMRKNSNEQILIEKRLKSLEEINE---GNLTNTKFYAP------------------------FEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKAN 1110
NK+ F ++D+L C +C++IL A Q CGCRYC CI+ YL EK C +C+ +I D NK+I +KVKC C F D+L +K H C Y C M+ + IK+ HL NE Y+ ++L ES R+L + + + + L EN L+ +++ + ++ K D M E N S ++ L I +RK + +E+R+ L E N+ L K P + WKI++ S+L + + G S++FY+ GYKM + I P G + + HL ++FV++ G+YDD+L WP V I + D S + ++FK +
Sbjct: 19 NKWRFT----INDNLKCVMCQDILLDAIQTDCGCRYCKECIDNYLENGEKECVAEYEDCRSVIT---SYIYDRATNKEISLLKVKCLYEGCVFEDTL----KSIKGHLDFCEYRNEMCSLCGME-YIIKEESNHLANECLLREVLCQYCRTLLTFKEYNESHLCFES-RDLCGKYEAICPYGCTGESKVNLLHHRKSCENKPLECPLHVFDCKQLIPK---DQMTEHLNTSSYEHTLTIVTELRKLEKQNKHMEERMNILIEENQLLKATLEVMKLDLPKNSGSISRDTSLKRANKTIFRNGKYMWKIKSFSKLRENAMRGKNPTILSEAFYTSDFGYKMCMKIYPCGDGVGKGTHLSIFFVIMKGDYDDILPWPFKNKVIITIFDDFSKSTNLSDTFKPD 403
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A2B4SJ65 (TNF receptor-associated factor 4 OS=Stylophora pistillata OX=50429 GN=Traf4 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.523e-24 Identity = 91/364 (25.00%), Postives = 158/364 (43.41%), Query Frame = 1
Query: 49 EAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGC----IESRMDTHNIKDHLT-------------------NETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAP-FEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
E+ L +D+ F S + +D +C IC L A CG R+C C+ ++ N CP + ++ ++ ++D+ D + ++ILS +KCP+ CQ+ L + H K KCPY V C RM + +++H E + H N SN + +E +E +E ++ + + ++ LQ +E +++ K + ++ K NE +L++ + E + +K P F WK+ ++ Q+K G S FY+ GYK++L ++P G HL + +V+ GE+D +L WP N VT LVDQ
Sbjct: 6 ESGELPTGYDYDFVSEIDEDFICQICHLPLRNAVLTRCGHRFCVDCLNEHFRRNSPNCPLD----REKLDKDKDVFPDKASQRRILSYLIKCPDK-CQWVGELRDVEGHKK----KCPYVIVQCPNHNCHERMARNLVEEHAAVTCQWRMVSCQFCQKKYPKAEEHIHCETCHMFPLNCSNGCE-----QVVPREQVERRNLETHIHEDTTSHLGFACKKLAVLQ---QEFNKENKTLKKQLDDV--KKENENLLLKASAQ------EKEMQKSKMETPTFVWKVTGFDDILRQAKHGRNNEMDSDPFYTGKYGYKLKLSVNPNGDGSGRNTHLSAFVIVMRGEHDGILPWPFNHKVTFTLVDQ 344
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A5A9NXF1 (TNF receptor-associated factor OS=Triplophysa tibetana OX=1572043 GN=E1301_Tti007446 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.719e-24 Identity = 107/433 (24.71%), Postives = 193/433 (44.57%), Query Frame = 1
Query: 67 NKFDFVFDSNLSDDL-----LCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKF-CPKNIGNCKKLINFNRD---ITIDHF-----ANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYA---------------------EVGCI----------------ESRMDTHNIKDHLTNETYSHTNLLIESIR----NLSNE-------INFLK---------------------ENAIRNK---------EMIENLQIENIELQNEI--NMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKR---LKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
N++ F ++ D++ LCS C N+L+ A Q +CG RYC C+ L N+ C K CK+ + D +T+D F NK+IL +KV C C + +L DH +C YA E GC E + + +K+H + H LL+E IR NLS++ ++FL+ E+ + +K E+ Q++ ++ + ++ N+I+ + E++ Q G+ L+ D+ ++I ++ K +Q + ++ + SL++ G L N + F W++ +++Q + ++ G++ YS +FY+ G+K MRLY++ G + + H+ ++FV++ GEYD +L WP VT L+DQ
Sbjct: 19 NEYPSGFPQSICDEVPKEKFLCSNCNNVLNKARQTVCGHRYCLACVNWLLRNNKDLVCTK----CKEDQSIESDTSVLTLDQFFNDAAINKEILDLKVHCANQGCPWRSTLKNFEDHQS----QCEYALIPCNIGCGIMVQRKALATHLERGCPNNKTTCASCSGVLTPRELQGNADKVKEHESCSHVGHLQLLLEVIRGLQSNLSSQERGIPEILDFLQPGTTGSSLVSHEESELETDGGESGVNDKASSLHDDQAELAVGQQLDTLQQRVQVMENIISALNREVEKTQIGVVALERDNLNNQQIIQQLETKVEEQQEWLTRKDIHITSLQQCISG-LQNVSYDGTFLWRLCDVTQSLREAATGHKISQYSPAFYTARYGFKVCMRLYLN--GDGVGKGTHISLFFVIMKGEYDGILQWPFRHKVTFFLIDQ 440
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf1 (TNF receptor-associated factor 1-like [Source:NCBI gene;Acc:103045252]) HSP 1 Score: 87.4261 bits (215), Expect = 3.011e-18 Identity = 75/330 (22.73%), Postives = 150/330 (45.45%), Query Frame = 1
Query: 397 CPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIEL-----------------QNEINM---INIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSN---------------EQILIEKRLK--SLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
C ++E+GC + + +++H + T +H +LL+E +RN+ + E ++ + L +E Q E+ + ++ ++ ++ +++ + L + ++ + + R N N +Q LI K L+ SL++ + + F W+I ++SQ + ++ G + YS +FY+ G+K MRLY+ YG + + H+ ++FV++ G+YD +L WP + VT L+DQ +V ++F+ + A+F RP + C K+ V D ++F+KC VD
Sbjct: 196 CVFSEIGCT-FKGNPDKVREHEVSSTSAHLHLLVEVVRNVQMSVPPPPERTVQYPALDLTLNGGELETDSGDTGANDKALSLHDDQAELEVGQQLHALQQRLQIMENIITALNREVEKTQLTVVVLERDNHNNMNLIQHLEAVVAEQQQRLIRKDLQISSLQQSISAQ-QDVSYDGTFLWRICDVSQKLKEAATGQKSSQYSPAFYTSRYGFKVCMRLYM--YGDGVGKGTHISLFFVIMKGDYDPLLSWPFKQKVTFFLIDQNQRE-HVVDAFRPD----LRSASFQRPVSEM-NVASGCPLFFPLSKLRSPKHAYVKDDTLFIKCVVD 515 HSP 2 Score: 55.8398 bits (133), Expect = 5.384e-8 Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 1
Query: 67 NKFDFVFDSNLSDDL-----LCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKF-CPKNIGNCKKLINFNRD----ITIDHF-----ANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGC 420
N+F F ++ DDL LCS C N+L+ A Q CG RYC C+ L N+ C K CK+ D +T+DHF NK+I ++V C C + +L DH +C YA + C
Sbjct: 8 NEFPCGFPQSICDDLPPVHFLCSSCNNVLNEAHQTQCGHRYCRACVMWLLRNNKDLICTK----CKEDPGSESDSSMMLTLDHFFSDNAINKEIQELRVHCVNQGCGWRSTLKDFEDHQS----QCEYALIPC 132
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 86.6557 bits (213), Expect = 6.331e-18 Identity = 96/435 (22.07%), Postives = 172/435 (39.54%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFC-----------------------------------------QFSDSLIVMAD----------HMKSH--------SIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+D FD L C IC L A Q CG R+C CI K + + CP + + + D+FA ++ILS+ V+C + C + S LI D + SH + C ++ GC E +M +++ H+ T H + + +RN + IN L I + ++ + E++ +++ + EL++ +++ + E+ +N S + + K+L SLEE + L ++ + W++E S I + G+ +S FY+ GYK+ RL++ P + + Y L V+ + GE+D L WP+ + + ++DQ G +V+ + AF RP+ QR+P Y
Sbjct: 56 YDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVD-----NEVLTEDQLFPDNFAKREILSLTVRCRNVGCMEKMELRHLENHIPHCKFATVPCPQCQESVWKSELEEHINQECSHRLITCPDCAENIIYAEKQLASHCDTDCLKAPVACTFSIFGCRE-KMLRNDLALHMQEFTQMHMRYMADVLRNQT--INGL----ISSHSASAASPTDSRGASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQMTELRKKLASLEE-SMRELQAQQYQGVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDLQ-----AFQRPTVQRNPKGFGY 470
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf1 (TNF receptor-associated factor 1-like [Source:NCBI gene;Acc:103045252]) HSP 1 Score: 84.7297 bits (208), Expect = 2.744e-17 Identity = 74/343 (21.57%), Postives = 152/343 (44.31%), Query Frame = 1
Query: 397 CPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINM---------------------------------INIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSN---------------EQILIEKRLK--SLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYK--MRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
C ++E+GC + + +++H + T +H +LL+E +RN+ + E ++ + +LQ +++ +I + ++ ++ ++ +++ + L + ++ + + R N N +Q LI K L+ SL++ + + F W+I ++SQ + ++ G + YS +FY+ G+K MRLY+ YG + + H+ ++FV++ G+YD +L WP + VT L+DQ +V ++F+ + A+F RP + C K+ V D ++F+KC VD
Sbjct: 206 CVFSEIGCT-FKGNPDKVREHEVSSTSAHLHLLVEVVRNVQMSVPPPPERTVQYPALDLHLQNQDMTPLPDITLNGGELETDSGDTGANDKALSLHDDQAELEVGQQLHALQQRLQIMENIITALNREVEKTQLTVVVLERDNHNNMNLIQHLEAVVAEQQQRLIRKDLQISSLQQSISAQ-QDVSYDGTFLWRICDVSQKLKEAATGQKSSQYSPAFYTSRYGFKVCMRLYM--YGDGVGKGTHISLFFVIMKGDYDPLLSWPFKQKVTFFLIDQNQRE-HVVDAFRPD----LRSASFQRPVSEM-NVASGCPLFFPLSKLRSPKHAYVKDDTLFIKCVVD 538 HSP 2 Score: 55.8398 bits (133), Expect = 4.560e-8 Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 1
Query: 67 NKFDFVFDSNLSDDL-----LCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKF-CPKNIGNCKKLINFNRD----ITIDHF-----ANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGC 420
N+F F ++ DDL LCS C N+L+ A Q CG RYC C+ L N+ C K CK+ D +T+DHF NK+I ++V C C + +L DH +C YA + C
Sbjct: 8 NEFPCGFPQSICDDLPPVHFLCSSCNNVLNEAHQTQCGHRYCRACVMWLLRNNKDLICTK----CKEDPGSESDSSMMLTLDHFFSDNAINKEIQELRVHCVNQGCGWRSTLKDFEDHQS----QCEYALIPC 132
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf5 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:103031120]) HSP 1 Score: 69.707 bits (169), Expect = 2.174e-12 Identity = 81/363 (22.31%), Postives = 150/363 (41.32%), Query Frame = 1
Query: 313 KVKCPELFCQFSDSLI--VMADHMKSHSIKCPYAEVGCI------ESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKEN-AIRNKEMIE-NLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKR--LKSLEEINEGNLTNTKFYAPFEWKIENISQLID----QSKLGNQRFTY----------------------------SQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
K CPE Q + I V +K H+ +CP E CI R +K H E H LL+ES L +++ L+++ A + E+ E NL + N L+ E++ + M+ + +EL + +++ K + +++ + ++ L+ R L SL E + + ++ ++L+D Q + QRF S FY+ +GYK+ + G HL +Y +++ G++D +L WP + VT+ ++DQ +V SF + F+ RP+ + + + + + N V D ++F+K VD
Sbjct: 187 KTSCPEAEVQCPNKCIHLVKRHKLKDHADECPEQETDCIYKKYGCTVRNKRGQVKVHEQTEFNHHVLLLLESNSKLIKQVDQLQQDFAAQQGELKERNLLVSN--LKREVSKCDTTVSAMQRSVEEQRELVSSVKRELKDLRDVLEADLTKEELVSLRASLDSLREQVAMTQSLREHLGALGQTCQSHTRLLDIHVQQLQCSEQRFQQLESTSYDGKLIWKVHDYHRKKEAGTALNSPPFYTSHSGYKLSARVYLGGEGTARGTHLSLYVMLMRGDFDSLLPWPFRQNVTLAVLDQSGNRNHVSLSFTPDLASNNFR----RPTSETNAALGFPRFITHADLEAPRNAAYVRDDTLFIKVKVD 543
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf6 (TNF receptor associated factor 6 [Source:NCBI gene;Acc:103021325]) HSP 1 Score: 68.9366 bits (167), Expect = 3.345e-12 Identity = 66/283 (23.32%), Postives = 127/283 (44.88%), Query Frame = 1
Query: 364 MADHMKSHSIKCPYAEV----GCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKN---SNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYID-PYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
+A H + +K P A GC E +M +++ H+ T H + + +RN + IN L I + ++ + E++ +++ + EL++ +++ + E+ +N S + + K+L SLEE + L ++ + W++E S I + G+ +S FY+ GYK+ RL++ P + + Y L V+ + GE+D L WP+ + + ++DQ G +V+ + AF RP+ QR+P Y
Sbjct: 227 LASHCDTDCLKAPVACTFSIFGCRE-KMLRNDLALHMQEFTQMHMRYMADVLRNQT--INGL----ISSHSASAASPTDSRGASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQMTELRKKLASLEE-SMRELQAQQYQGVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVH--TMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDLQ-----AFQRPTVQRNPKGFGY 494 HSP 2 Score: 52.7582 bits (125), Expect = 4.490e-7 Identity = 35/118 (29.66%), Postives = 53/118 (44.92%), Query Frame = 1
Query: 73 FDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIE 426
+D FD L C IC L A Q CG R+C CI K + + CP + + + D+FA ++ILS+ V+C + C L H+++H C +A V C +
Sbjct: 56 YDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVD-----NEVLTEDQLFPDNFAKREILSLTVRCRNVGCMEKMEL----RHLENHIPHCKFATVPCPQ 164
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 82.0333 bits (201), Expect = 2.580e-17 Identity = 62/246 (25.20%), Postives = 112/246 (45.53%), Query Frame = 1
Query: 445 NIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQN---------EINMINIVKMEMKTLQDGMKELK----NDSQQKNKLIYEMMRKNSNEQIL--IEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
+I+DH TN + T + + ++LS+ N R +E L N +LQ+ ++ +M TL++ ++ L+ N + + R ++ +L E+RL+ LE + WKI + ++ ++ G YSQ FY+ GYKM R Y++ G + HL ++FVV+ GEYD +L+WP + VT+ L+DQ ++ ++F + F+
Sbjct: 140 SIEDH-TNMSEMLTQRVAQLEQDLSHWSTLTGSNNTRLGSTLEMLTQHNEQLQSLHVAQRAPQRDADTAALRRDMATLRERLRALEAALGNPGPCEERCHMHEQRLTMHDGLLDTAERRLQVLE--------TAGYSGKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMCARAYLN--GDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLDQGAARRHLSDTFTPDPASGSFR 374
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 73.1738 bits (178), Expect = 2.764e-14 Identity = 68/327 (20.80%), Postives = 123/327 (37.61%), Query Frame = 1
Query: 361 VMADHMKSHSIKCPYAEVGCIESRMDT------HNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEI------------------NMINIVKMEMKTLQDGMK---------ELKNDSQQKNKLIYEMMRK--------NSNEQILIEKRLKSLE--------------------EINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS 1152
+ + + SH CPY + C S+ +K+H + T H +L+ NL +++ L+ + L EL+ E+ M+ + + LQ+ M+ L+ D ++E+ + S RL +L+ ++ L + WKI + ++ + G YSQ FY+ GY+M R Y++ G + HL ++FVV+ GEYD +L WP + VT+ L+DQ + ++FK + ++F RP+
Sbjct: 114 IAREELVSHLGICPYKQAECFFSQFGCKYKGTLQGLKEHESGATQQHLSLVTARSANLELKVSMLQSQLAERANSADLLGTRVRELEKELISVGQTASKNESVLCVVQRMLAVQTERLLRLQESMQGTTRRADHDALRGDLDGTAATLHELGTRVAAIEESGGSVTHSSTPTRLAALDSALSRHDTQLFAHDTRLAEMDLRFQVLETASYNGKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLN--GDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGAARRQLSDTFKPDPAS----SSFRRPT 434
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 62.003 bits (149), Expect = 1.342e-10 Identity = 81/385 (21.04%), Postives = 143/385 (37.14%), Query Frame = 1
Query: 175 CYHCIEKYL----NGNEKFCPKNIGNCKKLIN-FNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEI-----------NFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKL----IYEMMRKNSNEQILIE---KRLKSLE-EINEGNLTNTKFYAP-FEWKIENISQLI----------DQSKLGNQRFTYSQSFYSHVNGYKMRLYID-------PYGYQ------INEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQI-LGSIYVKESFKANSIDRYFKAAFDRPS-QRSPDDIDY 1179
C HC EK +E+ CP + NCK R+ H E+ CQ + + C ++ +GC E++M + H+ T H LL ++ L ++ + N++ ++ + + D ++E+ +++ L I E+ K N+Q L+ + ++SLE + E + ++ A F W++E S+L+ D +S FY+ V GY++ L + P G HL ++ ++ G+YD L WP + I +VDQ S++V E A+ +AF RPS R+P Y
Sbjct: 186 CLHCCEKMAYKDSKNHEQMCPLVVVNCKHCQQELIREQLGPHL-------------EVDCQQAQ-------------VPCTFSPLGC-EAQMVRSLLAAHMHEHTQVHMRLLANGLKILRIQVGQGAQPSSAAGSSAPPNSLSWLSSTSGGDVQTAGASRSQGSRDRAACDCAQELDRLREITRTLEERVVLQLHQIRELSAKTDNQQGLLAEATRLVRSLEARVAE---SESRLCAGIFTWRVERFSRLLPGGLASGFASDGMHPDAPAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDYDHRLPWPFKGRIRISVVDQCERDSVHVTEMMDADPQ----LSAFQRPSVHRNPKGFGY 536 HSP 2 Score: 53.9138 bits (128), Expect = 4.683e-8 Identity = 37/141 (26.24%), Postives = 60/141 (42.55%), Query Frame = 1
Query: 19 FNEMSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCI--EKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRM 435
F+ +SG +++ ++ F+ L C IC L Q CG R+C CI L CP + + + D+FA ++ILS+ V+CP C L ++ H ++C YA+V C+ M
Sbjct: 36 FHSVSG---DDSATEAQGYEADFEPPLESKYECPICLMALREPVQTPCGHRFCRACILHSMRLRDAGPKCPVD-----NAVLHEGQLFPDNFAKREILSLTVRCPNKPCGHRGELRA----LQEHQLRCEYAQVPCVRCEM 164
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008091.1 (pep scaffold:Pmarinus_7.0:GL477915:34322:50582:-1 gene:ENSPMAG00000007312.1 transcript:ENSPMAT00000008091.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.9878 bits (123), Expect = 1.459e-7 Identity = 45/224 (20.09%), Postives = 100/224 (44.64%), Query Frame = 1
Query: 397 CPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKE----MIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQ------ILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTY--SQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWP 1032
CPY+ +GC+ R ++ +H N H ++ ++ + ++ + I++ + Q+ ++ + E + V+ +++ + ++ D + +L +M R ++Q + + +RL LE NT + F WKI+++ + ++ G +R S +F++ GY++RL + G ++ YA ++ G YD L WP
Sbjct: 187 CPYSPLGCL-YRGHGESLHNHDKNSVEVHLAIVYDAFKKTFEQLIKGHADNIKHPPSARLVAAEAQLATMDRRVE-EVAKRVERDVRVSEASTRQGNIDRDETARLQNKMARVEHSDQETERSILGLTRRLAELE--------NTAYNGMFLWKIKHVINRLREAGNGAERPPQIDSPAFFTTRYGYRLRLRLCRSGEHVSAYA------MLGPGPYDATLAWP 394
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO48773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI91]) HSP 1 Score: 84.7297 bits (208), Expect = 8.897e-18 Identity = 91/427 (21.31%), Postives = 162/427 (37.94%), Query Frame = 1
Query: 61 LLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKC---PELFCQFSDSLIVMADHMKSHSI------------------------KCPYAEVGCIESRMDT--HNIKDHLTNETYSHTNL----------------LIESIRNLSNEINFLK-------------ENAIRNKEMIENLQIENIELQNEINMINIVKMEMKT----LQDGMKELKNDSQQK-NKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPS 1152
L +D FD L C IC L Q CG R+C++CI + + CP + R++ D+FA ++++S V C E C + +L + +H+K CP V C +M I++HL TN E+ N S + K E+ E+ ++ +Q E++M+ E + L+ ++++K S ++ +L +++MR + E L EG + N F WK++N Q + S G +S FY+ + GYKM L ++ G H+ ++ ++ G++D +L+WP +T+ ++DQ I + + + AF RP+
Sbjct: 40 LEEGYDEFFDPPLESKYECPICLLGLRDPVQTPCGHRFCFNCIRRSIRDAGPKCPVD-----NTPLSERELYRDNFAKREMMSFIVWCRLKKERGCTWKGALKELEEHLKGCPCMDTNCPNECGAVMQRKEVDKHCAEACPNRSVPCDHCKMKVTISKIEEHLKGCPCMDTNCPNECGAVMQRKEVDKHCAEACPNRSVPCDHCKMKSSKEQASHGPQEHTPHEAELRREALFQSANMQREVDMLGSRGDEYRQFLAYLERKVEDVKTSSDRRIAELTHKLMRLETREIEL------------EGRVCNGTFI----WKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGGLGEHVSLFIHMMQGDWDGILEWPFIGRITLSILDQS-DQIDSRRPISETLVAKPNLLAFQRPT 444
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO48394 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJK8]) HSP 1 Score: 79.7221 bits (195), Expect = 3.369e-16 Identity = 102/458 (22.27%), Postives = 178/458 (38.86%), Query Frame = 1
Query: 79 FVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKF-CPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSL----------------------------IVMADHMKS------------------------HSIKCP-------YAEVGCI----ESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMI----------NIVKMEMKTLQDGM--------KELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLT------------NTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYF-------KAAFDRP 1149
F+ N D+L+C+IC +++ CG YC +CIEK+ NG E CP + K I D ++ +LS++VKC C++ L I+M H + H CP ++E+GC ES D +H + +H ++ E+IR+ +I+ L + + ++ LQ ++ + E+N I N ++E + + G+ KE + +++ + E +RKN ++ + K+ + +G F E K N D S G+ S FY+ GYKMRL P GY + HL + ++ GEYD +L+WP + +T+ L++Q E +++ +++ Y K F+RP
Sbjct: 20 FIIPPN--DELICAICHMVVNEPVLTSCGHSYCKYCIEKWCNGKEVVTCPVDNEQLKP-----SQIFPDKKTDRIVLSLEVKCTNNPCRWKGELRQKQKHLKICSHKAVKCILEGCNVKVPRILMEKHTNTCGWRLLHCKPCNLSYPKKDEETVQHKDDCPLAFLPCRFSEIGCTFKGRESARD-----EHCESAVQTHLHIACETIRDNKEQISDLHKELDKVRQ---ELQTKSCDHMKEVNAIREKHDEAIRDNKGQIEALSKEHGIASNTIHENKEQLDTLKKELGIASETIRKNRDQIAKLSTACKT--QYTDGTFVWRICNYKDKYKKAVAFATNQEVKGGNSDSDDDISMAGD--IMVSLPFYTSRYGYKMRLKAYPNGYGDGKGTHLSLSIRIMKGEYDAILEWPFRRKITLSLINQ-------SEQWRSETVEIYPDDATPDKKHKFERP 451
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4]) HSP 1 Score: 79.7221 bits (195), Expect = 3.370e-16 Identity = 88/414 (21.26%), Postives = 158/414 (38.16%), Query Frame = 1
Query: 88 DSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKV-------KCP-----------------------------------------------ELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKE-----------------NAIRNKEMIENL----------QIENIELQNEINMINIVKME--MKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
D+ ++ LC+ C+ I+ A Q CG RYC CI L+ C K F D FA+++IL + V CP E C + + +V+A + H CP V C + + ++ H T T +E R N + L++ N +++ + EN+ ++ N+E + + + +V+ + L+ + L Q+ + +I + R+ R ++ ++ E L T F + WKI N++ ++ G YS F++ +GYKM R+Y++ G N H+ ++FV++ GE+D +L WP + VT+ L+DQ
Sbjct: 15 DTAIAAKHLCAKCRLIVKDAVQTACGHRYCSPCISPLLSRGPIQCDVCGSTITKPETFR-----DKFADREILELHVHCVNQPHGCPWEGELRHRQNHHTKCEFNPISCVHPECGKKLSVAKLPEHLQNECQYREETCSYCEQPVVVARMKEHHEKTCPSYPVNCPKCSKELIRVEVHSTPFTREPR---LEKGRGCENTLEVLEDHESRIKKLEQRGGGIGVNGLQSMRISENIDNEAIGDVLRRVANVEAKGADHEVLVVEAHSAVDELRREVGRLNVKLQESDDIIRRLERQLELHDQGTGLRNLAIADLEERLNTLQGTTFDSVLLWKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNH--HVSLFFVIMRGEFDALLRWPFRQKVTLMLLDQ 418
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO31690 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX76]) HSP 1 Score: 78.1814 bits (191), Expect = 9.225e-16 Identity = 82/365 (22.47%), Postives = 150/365 (41.10%), Query Frame = 1
Query: 22 NEMSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKF-CPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCI----ESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIE------NLQIENIELQNEINMINIVK----MEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSL-EEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
N GFN E+ F++ S +L+C IC +++ CG +C C K+ NG + CP + K + N+ D +++LS+ VKC C + L K H KC + + C+ ++R+ ++++ H + + E +K ++ E + + + N V+ M T++D KE++ ++++ +R N+ E + K L + + I E K F W+I + L + YS SFY+ GYK++L + N HL +Y ++ GEYD +L+WP + +T+ ++DQ
Sbjct: 7 NTGEGFNPEQ-----------FETPPSPELMCGICLMVVNKPVLTYCGHSFCNFCFNKWRNGKDVVTCPVDY----KQLETNQ-FMADKKTERQVLSLCVKCMNGPCSWKGEL----RDKKKHLTKCGHEVIKCVFDGCDTRLARNSMEKHEETCEWKIVTCEFCDVPYPKREEETVKHRGDCPLAILPCKFSDIGCTFEGRQHAHVAHCENAVQAHLDMACGTIRDNNKEIRKNNKK--------IRGNNKEIETLHKELNTANQTIRELKGKMAKLIGTFVWRICDYKDLYGE--------IYSPSFYTSKYGYKVQLKANLRTNPFNGGTHLSLYACIMVGEYDALLEWPFRRKITLYVIDQ 335
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO40665 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6K0]) HSP 1 Score: 76.6406 bits (187), Expect = 2.662e-15 Identity = 75/307 (24.43%), Postives = 128/307 (41.69%), Query Frame = 1
Query: 160 CGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPY-AEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNE-INFLKENAIRNKEMIENLQIE-NIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTY-SQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
CG R+C C+E L FCP + ++ I+ ++ + D + +LS+ VKCP +H C + E+G N+ + +N + IE+ + + + +N I +EM ++ ++ + L + V + K + M++ DS ++ + R++ LE+ E TN KF WKI N +QL QS ++ S FY+ GYK+R G + HL +Y V++ G+YD VL WP + V L+DQ
Sbjct: 58 CGHRFCESCLEPILRKPPAFCPID----RRCISRDK-VYPDKACKRTVLSLTVKCP------------------NHVTDCEWVGELG---------NLPSNSSNSYEVLVKVHIEACKRVPIKCVNNCGRTDIAREEMAVHIDVDGDCPLATVPCKYSDVGCKTKVKRIEMEKHLQDSM-------------ASHLDMAHIRIRELEQRQEKICTNGKFL----WKISNYTQLFQQSATKKEKEKLCSPPFYTGQYGYKLRAEAFLNGLGQGKGTHLSLYVVIMKGDYDSVLPWPFQQRVDFILIDQ 315
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 94.7449 bits (234), Expect = 9.072e-21 Identity = 90/370 (24.32%), Postives = 163/370 (44.05%), Query Frame = 1
Query: 115 CSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELF--CQFSDSLIVMADHMKSHSIKCPYAEVGC----IESRMDTHNIKDHLT-------------------NETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQ---DGMKELKNDSQQKNKLIYEMMRKNSNEQILI-EKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFK 1131
C C+ +L Q CG R+CY CI L+ CP ++ F I D +++I+++KV C CQ SL + DH+ CP+ EV C + RM I +HL E H + + +S + + R+++++ + + +EL+ E+ + ++ EM++L+ D ++ + +Q + E ++ + + E RL ++ + L + WKI + + + G YSQ FY+ GYKM R+Y++ G + + HL ++FVV+ GEYD +L WP + VT+ L+DQ ++ ++FK + F+
Sbjct: 48 CEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADMEPL-----FKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHVNV----CPFFEVPCPLGKCKERMMRKEIPEHLAWKCKYRESTCEFCKNKMPLTELQKHKETVCPAF-PVSCPNHCTSSSLPRSEKLMSSHTEKLLELELELRSLRQLRDEMESLRGTLDTVRTRLSALEQGGRASLETQLNRHDDMLSVHEIRLADMD-LRFQVLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLN--GDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPSSSSFR 404
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 75.0998 bits (183), Expect = 3.440e-14 Identity = 68/257 (26.46%), Postives = 120/257 (46.69%), Query Frame = 1
Query: 370 DHMKSHS---IKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLS------------NEINFLKENAIRNKEMIENLQIENIELQNEINMI-NIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLK----SLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
DH KS + CP++EVGC +S ++ I +H + T H LL+ + +++ E + L + + +++L +++ + NIV + + ++ L+ S Q ++L E + SN+ +E+ L L E + L + F WKI + S ++ G +S +FYS GYKM RLY++ G HL ++FVV+ +YD +L WP ++ VT+ L+DQ
Sbjct: 207 DHAKSCAKSKSACPFSEVGC-KSVVENGKISEHEHSSTMEHLRLLLPMVLSMTRTRLDTSPSGEWQEDSGLGLYRAPDDGCGAAASVPSVDLDKKVSALENIVCVLNREVERSSLTLEAFSHQ-HRLDQEKIENLSNKIRQLERSLTVKDLQLSEAEQMVRELQYCTYDGIFVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLN--GDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQ 459
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 75.0998 bits (183), Expect = 3.514e-14 Identity = 68/257 (26.46%), Postives = 120/257 (46.69%), Query Frame = 1
Query: 370 DHMKSHS---IKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLS------------NEINFLKENAIRNKEMIENLQIENIELQNEINMI-NIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLK----SLEEINE--GNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKM--RLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQ 1068
DH KS + CP++EVGC +S ++ I +H + T H LL+ + +++ E + L + + +++L +++ + NIV + + ++ L+ S Q ++L E + SN+ +E+ L L E + L + F WKI + S ++ G +S +FYS GYKM RLY++ G HL ++FVV+ +YD +L WP ++ VT+ L+DQ
Sbjct: 200 DHAKSCAKSKSACPFSEVGC-KSVVENGKISEHEHSSTMEHLRLLLPMVLSMTRTRLDTSPSGEWQEDSGLGLYRAPDDGCGAAASVPSVDLDKKVSALENIVCVLNREVERSSLTLEAFSHQ-HRLDQEKIENLSNKIRQLERSLTVKDLQLSEAEQMVRELQYCTYDGIFVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLN--GDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQ 452
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: ENSORLT00000001369.2 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:101170323]) HSP 1 Score: 68.5514 bits (166), Expect = 4.284e-12 Identity = 97/511 (18.98%), Postives = 181/511 (35.42%), Query Frame = 1
Query: 43 DEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNG---NEKFCP----------------------------KNIGNCKKLINFN--------------------------RDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIES--------RMDTHN-------------------------IKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMI--------NIVKMEMKTL---QDGMKELKNDSQQ----KNKLIYEMMR-KNSNEQILIE------------------KRLKSLEEINEGNLT----------NTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDI 1173
+ E +L + FV L ++ +C ICK ++ QN CG YC+HC++ L + CP N C ++ N R + +H N + CP F L V+ DH++S CP +VGC + R+ H +K H H L+++S +L ++ F+++ A+ ++ ++ + +LQ ++ + +IV +TL +D + ++ D QQ + E+ R K S + ++ E KR L E++ L T + WKI++ + + G S F++ GYKM + G HL +Y V++ G++D +L WP + V++ ++DQ + +F+ + + F +P+ S ++
Sbjct: 46 ESELASLQHSLKFVM--KLKEEFICPICKGVVLNPQQNSCGHIYCFHCLQGLLESSLLSGPVCPVEKAAITPSEVFQDNCCKREISSLEVYCTNSPLCTSVLALNQLQEHLKSCQYEQLLCSNPGCTELLQRRLLQEHL-NATCPHRRESCPHCLQPF--QLSVIQDHVQS---SCPEVKVGCPDGCSTLVPRNRLTEHGESCPEVHTDCSFKMFGCSVKGKRRKVKLHEEAAVCHHVLLVLKSSAHLEQQVVFVQKEALLRQQEVQTDTLLLSDLQEQLGSVLQQSRSQEHIVATAQRTLSRQEDALSSVQLDLQQVSCGMGSGLDELRRFKTSLDGVMQELLAAETLREHIATLEENRKRHSGLLELHVAQLALNKQHLQELELTSYDGRLIWKIKDFQKRREAEATGQHPCLSSVPFHTGRCGYKMAMKAYLNGDGEGRGTHLSLYVVLMPGDFDALLPWPFKQTVSLSVLDQSGARNHQSFNFRPDPTN----TCFHQPAAESASNV 544
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:101161428]) HSP 1 Score: 67.0106 bits (162), Expect = 1.376e-11 Identity = 38/154 (24.68%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 664 KELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSI----YVKESFKANS 1113
+ L++ ++ ++ ++ + E + + + ++ L ++G L WK+ + S+ + ++KL + +S FY+H GYK+++ G E +HL VY V+ GEYD++L+WP + VT ++DQ S+ ++ E+F +
Sbjct: 261 RHLEDTTKSHLTMMCNLVSRQRQEILELRREMEELSVSHDGVLI---------WKLNDYSRKLQEAKLRSNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHITETFNPDP 405
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070155.1 (SMESG000070155.1) HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1
Query: 28 MSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXXXXXXXMDGSIFLKCFVD 1269
MSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSVLINLKVLLNNPKLVMDGSIFLKCFVD
Sbjct: 1 MSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMINIVKMEMKTLQDGMKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSVLINLKVLLNNPKLVMDGSIFLKCFVD 414
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070236.1 (SMESG000070236.1) HSP 1 Score: 277.33 bits (708), Expect = 4.843e-89 Identity = 152/392 (38.78%), Postives = 231/392 (58.93%), Query Frame = 1
Query: 46 EEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCK-KLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQ--IENIELQN--EINM----INIVKMEMKTLQDGMKELKNDSQQKNK--LIYEMMRKNS--------NEQILIEKRLKSLEEINEGN-LTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRS 1161
+E + LL +DF D+ L DL+C+IC+ IL+ Q+ CGCRYCY CIEK+L K+CPK +C+ + ++ N ++ DHFANK +L+IKVKCPE C L + +H+KSHSI CP+ E+GC S + + + H+T E+YSHT LL+ESI+N+ NEI L+EN R ++ I LQ + N LQ+ EI + I+++K K + EL DS Q N+ I + + S + +R + + + ++ + APFEWKIE+ + ++K + YS+ FYSH NGYK+RL ++P G+ E HL V+F ++ GE+DD L WPM + V IGLVDQ+ I V + ++ S+++ F+ F +PS R+
Sbjct: 7 QEIYQLLTDYDFQVDTFLYSDLICTICEKILNRPYQSPCGCRYCYSCIEKHLKSGNKYCPKPTDDCREQCVDINNNLQFDHFANKNVLAIKVKCPEKACDTKAELKNLMEHLKSHSINCPFHEMGCSHSNVKSQAMVQHMTEESYSHTILLMESIQNMKNEIEILRENLQRKEKTIGKLQNQLRNNTLQHNKEIAIMKKDISLLKNVSKIEKGTTAELPTDSIQINQDGTICDFTEEESVHYTESETDSHFSGTRRSRFMSATSSLRCISANEDIAPFEWKIEDFMNRVQEAKSKLSKVIYSKPFYSHRNGYKLRLRVNPNGFGKWENTHLSVFFSIIEGEFDDSLFWPMERQVVIGLVDQVSNKIQVSDKYRWKSVEKDFQVIFHKPSTRT 398
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070096.1 (SMESG000070096.1) HSP 1 Score: 238.81 bits (608), Expect = 5.979e-74 Identity = 157/447 (35.12%), Postives = 240/447 (53.69%), Query Frame = 1
Query: 46 EEAWNLLNKFDFVFDSNLS-DDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCK-KLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMIN----------IVKMEMKTLQDG---------MKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGN---------------LTNTKFY-APFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXX--XXXXXMDGSIFLKCFVD 1269
EE WNL NK++F + N DL C +C+ +L ASQ+ CGCRYC+ CI YL EK CP +CK + IN ++DITIDH AN+KI + VKCPE C L M +H+ SH + CPY ++GC + DH+ + SH +LLI+ + N+ N+I +LK + + EN+ N + ++IN I I K++ +T Q G ++E+ ++ + K++ M + NE L+ ++ +I+ + L K + APFEWKI N + +++ G + YS+ FYSH NGYK++L IDP G + + +L V F ++ GEYDD LDWPM K V I L++Q G +++ + +K +S+ + K F +P R DD DY L +K + N K+ ++ SI LKCF+D
Sbjct: 6 EEMWNLFNKYNFKLNLNSKFADLKCCVCQGLLRNASQSPCGCRYCHSCIVVYLGDEEKCCPGPHDDCKYQRINIHKDITIDHAANRKISMVDVKCPEESCNARIQLRQMPEHITSHILSCPYLDIGCNIKLRGVCELVDHMLDADQSHASLLIQCLNNIKNDIEYLKGSDSASFSSSENINAINYDAISQINNIKLSTLPQISQKISKLKSETAQRGNDIGRLESQIEEVNSNCMSEIKILTLEMERLRNE--LVAYKIGKDLDISTTDSMLSSADSNSTSSFILKQVKEHIAPFEWKITNFMEKHERAISGEKLTVYSEPFYSHKNGYKIQLRIDPNGDEAVKALYLSVSFGIIGGEYDDELDWPMTKQVKISLINQKTGLVHISKRYKFDSVLKKSKCIFFKPISRFEDDEDYFFGTLKFIKFSVLFNNQKIFLNDSIVLKCFID 450
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070096.1 (SMESG000070096.1) HSP 1 Score: 238.81 bits (608), Expect = 6.077e-74 Identity = 157/447 (35.12%), Postives = 240/447 (53.69%), Query Frame = 1
Query: 46 EEAWNLLNKFDFVFDSNLS-DDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCK-KLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKEMIENLQIENIELQNEINMIN----------IVKMEMKTLQDG---------MKELKNDSQQKNKLIYEMMRKNSNEQILIEKRLKSLEEINEGN---------------LTNTKFY-APFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSIDRYFKAAFDRPSQRSPDDIDYCQSXXXXXXXXXX--XXXXXMDGSIFLKCFVD 1269
EE WNL NK++F + N DL C +C+ +L ASQ+ CGCRYC+ CI YL EK CP +CK + IN ++DITIDH AN+KI + VKCPE C L M +H+ SH + CPY ++GC + DH+ + SH +LLI+ + N+ N+I +LK + + EN+ N + ++IN I I K++ +T Q G ++E+ ++ + K++ M + NE L+ ++ +I+ + L K + APFEWKI N + +++ G + YS+ FYSH NGYK++L IDP G + + +L V F ++ GEYDD LDWPM K V I L++Q G +++ + +K +S+ + K F +P R DD DY L +K + N K+ ++ SI LKCF+D
Sbjct: 5 EEMWNLFNKYNFKLNLNSKFADLKCCVCQGLLRNASQSPCGCRYCHSCIVVYLGDEEKCCPGPHDDCKYQRINIHKDITIDHAANRKISMVDVKCPEESCNARIQLRQMPEHITSHILSCPYLDIGCNIKLRGVCELVDHMLDADQSHASLLIQCLNNIKNDIEYLKGSDSASFSSSENINAINYDAISQINNIKLSTLPQISQKISKLKSETAQRGNDIGRLESQIEEVNSNCMSEIKILTLEMERLRNE--LVAYKIGKDLDISTTDSMLSSADSNSTSSFILKQVKEHIAPFEWKITNFMEKHERAISGEKLTVYSEPFYSHKNGYKIQLRIDPNGDEAVKALYLSVSFGIIGGEYDDELDWPMTKQVKISLINQKTGLVHISKRYKFDSVLKKSKCIFFKPISRFEDDEDYFFGTLKFIKFSVLFNNQKIFLNDSIVLKCFID 449
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000067208.1 (SMESG000067208.1) HSP 1 Score: 236.113 bits (601), Expect = 5.445e-73 Identity = 150/392 (38.27%), Postives = 217/392 (55.36%), Query Frame = 1
Query: 55 WNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCYHCIEKYLNGNEKFCPKNIGNCKKLINFNRDITIDHFANKKILSIKVKCPELFCQFSDSLIVMADHMKSHSIKCPYAEVGCIESRMDTHNIKDHLTNETYSHTNLLIESIRNLSNEINFLKENAIRNKE-------MIENLQI------ENIE-LQNEINMINIV----KMEMKTLQDGMKELKNDSQQKNKL--IYEMMR-----KNSNEQILIEKRLKSLEEINEGNLTNTKFYAPFEWKIENISQLIDQSKLGNQRFTYSQSFYSHVNGYKMRLYIDPYGYQINEYAHLVVYFVVVNGEYDDVLDWPMNKLVTIGLVDQILGSIYVKESFKANSI-----DRYFKAAF 1140
W+LL K++F DL+C ICK +L A Q+ CGCRYCY CIEKYL +K CP C + + DI +DH AN KI VKCP+ CQF D L M H+KSH IKCPY E+GC + ++ +I +HL E +H NLLI+SI+N+ N+I L+E +++ E ++E+++I E IE L+ EIN IV K E+ L + +K K +++N++ + E + K S + + K + E+ N+ N Y+PF WKIEN S + +K F S +FYSHVNGYK+ L I P G +++ L V F ++ E+D L WPM +TIGLV+Q I+ E++ NS+ DR+F+ F
Sbjct: 9 WDLLVKYNFEVTGKNYRDLICVICKRLLINAHQSCCGCRYCYKCIEKYLEDKKKLCPGKGEGCNEQLISLFDIQVDHVANVKISKATVKCPDTICQFKDELRKMESHIKSHQIKCPYFEIGCSKVDINNADINNHLNIEHGNHANLLIDSIQNMRNDIATLREESLKKDEVLSLTQKLLEDMKIAHNRNEEVIETLKREINGNQIVAKNLKSEVANLNNELKNFKKTYKKENQIKSMNESQKSMNGNKGSPKTKVTINSPKPILELT--NVINGVKYSPFIWKIENFSDKKNTAKNVCDSFILSDTFYSHVNGYKICLTIFPDGSNVSQNDWLSVGFHLMKSEHDKDLFWPMAMNITIGLVNQKTNQIHASETYNVNSVTDINRDRFFRPVF 398 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of TNF receptor-associated factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30020033 ID=SMED30020033|Name=TNF receptor-associated factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1293bpback to top protein sequence of SMED30020033-orf-1 >SMED30020033-orf-1 ID=SMED30020033-orf-1|Name=SMED30020033-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=415bp MSGFNDEEAWNLLNKFDFVFDSNLSDDLLCSICKNILHIASQNICGCRYCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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