Transcriptional regulator ATRX
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019981 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Match: ATRX (ATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]) HSP 1 Score: 131.339 bits (329), Expect = 2.192e-31 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPV----SENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV ++ E +SR +M+ + K + H V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 42 PLDDETVN---EDASNENSENDITM-----------QSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRS-------------KMKTENLKKRGEDGLHG-------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 241
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Match: ATRX (ATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]) HSP 1 Score: 132.88 bits (333), Expect = 6.382e-31 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 385 DKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSV 849 D+ N ++NS +P V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + Sbjct: 100 DETVNEDASNENSENDITMQSLPKDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQL 251
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Match: ATRX (ATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]) HSP 1 Score: 131.724 bits (330), Expect = 8.673e-31 Identity = 81/250 (32.40%), Postives = 124/250 (49.60%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQE-MQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV +E+K E ++ E ++ D L HG V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 97 PLDDETVN---EDASNENSENDITM-----------QSLPKGTVIVQPEPVL-----NEDKDDFKGPEFRSRSKMKTENLKKRGEDGL---HG---------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 296
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Match: ATRX (ATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]) HSP 1 Score: 132.494 bits (332), Expect = 8.946e-31 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPV----SENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV ++ E +SR +M+ + K + H V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 97 PLDDETVNE---DASNENSENDITM-----------QSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRS-------------KMKTENLKKRGEDGLHG-------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 296
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Match: ATRX (ATRX chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]) HSP 1 Score: 132.494 bits (332), Expect = 9.063e-31 Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 385 DKLSNNHGHSQNSIKKPIFTPIPSTNSL-VTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 D+ N ++NS +P + L V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 100 DETVNEDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 258
BLAST of Transcriptional regulator ATRX vs. Ensembl Fly
Match: ADD1 (gene:FBgn0026573 transcript:FBtr0088042) HSP 1 Score: 83.5741 bits (205), Expect = 5.427e-16 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 475 VKCTACNLKLN--PYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQ 873 V CT C L L P + +++ HP+L V C C + F ED E CRWC +GG + CC C +CK+CI +NL + V+ +I ++ W CFSC K+L + +A VN + +R Q Sbjct: 64 VHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFS-KGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEN---WNCFSCT---SKILWPLRAQHWALVNYLQTQKRALQ 191
BLAST of Transcriptional regulator ATRX vs. Ensembl Fly
Match: ADD1 (gene:FBgn0026573 transcript:FBtr0088041) HSP 1 Score: 83.1889 bits (204), Expect = 6.162e-16 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 475 VKCTACNLKLN--PYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQ 873 V CT C L L P + +++ HP+L V C C + F ED E CRWC +GG + CC C +CK+CI +NL + V+ +I ++ W CFSC K+L + +A VN + +R Q Sbjct: 64 VHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFS-KGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEN---WNCFSCT---SKILWPLRAQHWALVNYLQTQKRALQ 191
BLAST of Transcriptional regulator ATRX vs. Ensembl Fly
Match: ADD1 (gene:FBgn0026573 transcript:FBtr0346629) HSP 1 Score: 82.0333 bits (201), Expect = 1.298e-15 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 475 VKCTACNLKLN--PYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQ 873 V CT C L L P + +++ HP+L V C C + F ED E CRWC +GG + CC C +CK+CI +NL + V+ +I ++ W CFSC K+L + +A VN + +R Q Sbjct: 64 VHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFS-KGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEN---WNCFSCT---SKILWPLRAQHWALVNYLQTQKRALQ 191
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 121.709 bits (304), Expect = 6.779e-28 Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 481 CTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSK 888 CTAC ++N + +S+ +HP L V++C +C KY++ DD ++ + CRWC EGG+L+CCD+CS ++CK CI RNLGR LSEI+++ +W C+ C P P++ + C K+ ++ S + + KT + Sbjct: 102 CTACGQQVNHFQKDSIFQHPALHVLICKSCF-----KYYMSDDISKDDEGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSEIMSE--QSKWHCYICCPEPLQDHVKTCEKVLLNLESSSRKPKGEHDKTKR 234
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 121.709 bits (304), Expect = 1.294e-27 Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 481 CTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKK 891 CTAC ++N + +S+ +HP L V++C +C KY++ DD ++ + CRWC EGG+L+CCD+CS ++CK CI RNLGR LSEI+++ +W C+ C P P++ + C K+ ++ S + + KT ++ Sbjct: 102 CTACGQQVNHFQKDSIFQHPALHVLICKSCF-----KYYMSDDISKDDEGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSEIMSEQS--KWHCYICCPEPLQDHVKTCEKVLLNLESSSRKPKGEHDKTKRE 235
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 121.709 bits (304), Expect = 1.362e-27 Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 481 CTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKK 891 CTAC ++N + +S+ +HP L V++C +C KY++ DD ++ + CRWC EGG+L+CCD+CS ++CK CI RNLGR LSEI+++ +W C+ C P P++ + C K+ ++ S + + KT ++ Sbjct: 122 CTACGQQVNHFQKDSIFQHPALHVLICKSCF-----KYYMSDDISKDDEGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSEIMSE--QSKWHCYICCPEPLQDHVKTCEKVLLNLESSSRKPKGEHDKTKRE 255
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 121.709 bits (304), Expect = 1.374e-27 Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 481 CTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKK 891 CTAC ++N + +S+ +HP L V++C +C KY++ DD ++ + CRWC EGG+L+CCD+CS ++CK CI RNLGR LSEI+++ +W C+ C P P++ + C K+ ++ S + + KT ++ Sbjct: 122 CTACGQQVNHFQKDSIFQHPALHVLICKSCF-----KYYMSDDISKDDEGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSEIMSEQS--KWHCYICCPEPLQDHVKTCEKVLLNLESSSRKPKGEHDKTKRE 255
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Match: AL935333.4 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_13:23024946:23062717:1 gene:ENSDARG00000113999.1 transcript:ENSDART00000182257.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AL935333.4) HSP 1 Score: 118.627 bits (296), Expect = 1.071e-26 Identity = 51/129 (39.53%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 466 LVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADV 840 L V C+AC ++N + +S+++HP+L+V++C +C KY++ DD + + CRWC EGGSLI CD+CS ++CK C+ RNLGR LS IL ++ +W C+ C P P+ L AC + ++ Sbjct: 164 LERVNCSACGQQVNHFQRDSVYRHPMLKVLICKSCF-----KYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKKCVLRNLGRKELSTILEEER--KWYCYVCSPEPLVELVLACDSVLENL 285
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Match: ATRX (alpha thalassemia/mental retardation syndrome X-linked [Source:NCBI gene;Acc:100380046]) HSP 1 Score: 128.257 bits (321), Expect = 1.724e-29 Identity = 77/239 (32.22%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 163 NSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N D NE S++EV DM+ L GT+V++P PV +E+K D S+N K I P V CTAC ++N + +S+++HP L+V++C C KY++ DD D + CRWC EGG+LICCD+C ++CK CI RNLGR LS I+ D+ ++W+C+ C P P+ AC +F ++ + + +K Sbjct: 83 NLDGSNENSENEV--------DMES---LPIGTVVVQPEPVL-----NEDK-----------------------DDFKGPEFRSRNKPKPDITIPKKQDGLHGIVNCTACGQQVNHFQKDSIYRHPALKVLICKACY-----KYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSAIM--DEEMKWECYICRPEPLLDSVTACDSVFENLEQLLQQNKK 275
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Match: ATRX (alpha thalassemia/mental retardation syndrome X-linked [Source:NCBI gene;Acc:100380046]) HSP 1 Score: 128.257 bits (321), Expect = 1.852e-29 Identity = 77/239 (32.22%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 163 NSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N D NE S++EV DM+ L GT+V++P PV +E+K D S+N K I P V CTAC ++N + +S+++HP L+V++C C KY++ DD D + CRWC EGG+LICCD+C ++CK CI RNLGR LS I+ D+ ++W+C+ C P P+ AC +F ++ + + +K Sbjct: 36 NLDGSNENSENEV--------DMES---LPIGTVVVQPEPVL-----NEDK-----------------------DDFKGPEFRSRNKPKPDITIPKKQDGLHGIVNCTACGQQVNHFQKDSIYRHPALKVLICKACY-----KYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSAIM--DEEMKWECYICRPEPLLDSVTACDSVFENLEQLLQQNKK 228
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Match: ATRX (alpha thalassemia/mental retardation syndrome X-linked [Source:NCBI gene;Acc:100380046]) HSP 1 Score: 128.257 bits (321), Expect = 1.864e-29 Identity = 77/239 (32.22%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 163 NSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N D NE S++EV DM+ L GT+V++P PV +E+K D S+N K I P V CTAC ++N + +S+++HP L+V++C C KY++ DD D + CRWC EGG+LICCD+C ++CK CI RNLGR LS I+ D+ ++W+C+ C P P+ AC +F ++ + + +K Sbjct: 61 NLDGSNENSENEV--------DMES---LPIGTVVVQPEPVL-----NEDK-----------------------DDFKGPEFRSRNKPKPDITIPKKQDGLHGIVNCTACGQQVNHFQKDSIYRHPALKVLICKACY-----KYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSAIM--DEEMKWECYICRPEPLLDSVTACDSVFENLEQLLQQNKK 253
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Match: ATRX (alpha thalassemia/mental retardation syndrome X-linked [Source:NCBI gene;Acc:100380046]) HSP 1 Score: 128.257 bits (321), Expect = 2.049e-29 Identity = 76/241 (31.54%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 163 NSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLV--TVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N D NE S++EV++ + L GT+V++P PV +E+K D S+N K I P T + V CTAC ++N + +S+++HP L+V++C C KY++ DD D + CRWC EGG+LICCD+C ++CK CI RNLGR LS I+ D+ ++W+C+ C P P+ AC +F ++ + + +K Sbjct: 78 NLDGSNENSENEVDM-----------ESLPIGTVVVQPEPVL-----NEDK-----------------------DDFKGPEFRSRNKPKPDITIPKKRTEDGLHGIVNCTACGQQVNHFQKDSIYRHPALKVLICKACY-----KYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSAIM--DEEMKWECYICRPEPLLDSVTACDSVFENLEQLLQQNKK 272
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Match: ATRX (alpha thalassemia/mental retardation syndrome X-linked [Source:NCBI gene;Acc:100380046]) HSP 1 Score: 127.872 bits (320), Expect = 2.133e-29 Identity = 75/239 (31.38%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 163 NSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N D NE S++EV++ + L GT+V++P PV +E+K D S+N K I P V CTAC ++N + +S+++HP L+V++C C KY++ DD D + CRWC EGG+LICCD+C ++CK CI RNLGR LS I+ D+ ++W+C+ C P P+ AC +F ++ + + +K Sbjct: 61 NLDGSNENSENEVDM-----------ESLPIGTVVVQPEPVL-----NEDK-----------------------DDFKGPEFRSRNKPKPDITIPKKQDGLHGIVNCTACGQQVNHFQKDSIYRHPALKVLICKACY-----KYYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSAIM--DEEMKWECYICRPEPLLDSVTACDSVFENLEQLLQQNKK 253
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Match: Atrx (ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]) HSP 1 Score: 126.331 bits (316), Expect = 3.866e-32 Identity = 63/178 (35.39%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 349 AQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSL-VTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 ++++ D+ N ++NS +P + L V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 32 TKYVESDDEKPTDENVNEKAATENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 202
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Match: Atrx (ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]) HSP 1 Score: 128.257 bits (321), Expect = 1.064e-31 Identity = 62/162 (38.27%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 397 NNHGHSQNSIKKPIFTPIPSTNSL-VTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 N ++NS +P + L V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 64 NEKAATENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 218
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Match: Atrx (ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]) HSP 1 Score: 127.102 bits (318), Expect = 4.976e-31 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 129 VSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 256
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Match: Atrx (ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]) HSP 1 Score: 129.413 bits (324), Expect = 5.240e-31 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 113 VSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 240
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Match: Atrx (ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]) HSP 1 Score: 132.109 bits (331), Expect = 5.366e-31 Identity = 62/176 (35.23%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 352 QFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 ++++ D+ N ++NS +P V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 88 KYVESDDEKPTDENVNEKAATENSENDITMQSLPKDGLHGIVSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 256
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Match: sp|Q7YQM4|ATRX_PANTR (Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.907e-30 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPV----SENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV ++ E +SR +M+ + K + H V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 97 PLDDETVN---EDASNENSENDITM-----------QSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRS-------------KMKTENLKKRGEDGLHG-------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 296
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Match: sp|P46100|ATRX_HUMAN (Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=5) HSP 1 Score: 132.494 bits (332), Expect = 4.409e-30 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPV----SENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV ++ E +SR +M+ + K + H V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 97 PLDDETVN---EDASNENSENDITM-----------QSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRS-------------KMKTENLKKRGEDGLHG-------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK 296
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Match: sp|Q7YQM3|ATRX_PONPY (Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 5.614e-30 Identity = 79/253 (31.23%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 133 PLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPV----SENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 PLD E+ N D NE S++++ + Q L GT++++P PV ++ E +SR +M+ + K + H V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 97 PLDDETVN---EDASNENSENDITM-----------QSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRS-------------KMKTENLKKRGEDGLHG-------------------IVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICHPEPLLDLVTACNSVFDNLEQLLQQNKK 296
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Match: sp|P82798|ATRX_MACEU (Transcriptional regulator ATRX (Fragment) OS=Macropus eugenii OX=9315 GN=ATRX PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 7.670e-30 Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNK 921 V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K S+K + E T++ Sbjct: 31 VSCTACGQQVNHFQKDSIYRHPTLKVLICKNCY-----KYYMSDDISRDADGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSAIM--DENSQWYCYICRPEPLLDLVTACHSVFKNLEQLLQQNKKKIKVESEKSNKLFEHTHR 176
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Match: sp|Q61687|ATRX_MOUSE (Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 1.423e-29 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRK 867 V CTAC ++N + +S+++HP L+V++C NC KY++ DD D + CRWC EGG+LICCDFC ++CK CI RNLGR LS I+ D++ QW C+ C P P+ L AC +F ++ + + +K Sbjct: 168 VSCTACGQQVNHFQKDSIYRHPSLKVLICKNCF-----KYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIM--DENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKK 295
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Match: A0A5K3F258 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.204e-48 Identity = 123/394 (31.22%), Postives = 197/394 (50.00%), Query Frame = 1 Query: 226 DMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNES-RRKSQIK--------------------TSKKPLQRMESTN----------KKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDEDKKTR 1314 D GN LLDGT V++PA V + S+ S Q +L+ + ++S P F P + TV+CT+C ++++P++ HP L VI+C C++ F D D K+ CRWC +GG LICCD CS ++CK+CIKRNLGRT L I + D W C C+P+ + LQ+ C++IF + S+N+ +++++IK T K P Q + T K S +K+ T P K V +S N + + +EWYL+N ++ +IL+ I + ++ I S + CVE F DI+ +E ++KA ++ +I A+VS F+S+YR H+ R + + R+++D K + Sbjct: 29 DATGNTVLLDGTPVVQPAGVED----SQGCSVQFDLQDGALPR--------------------RSSTSTP-FQP----GGVDTVRCTSCAVRISPFA---CAIHPHLSVIICKRCLKFYGKGNFA-KDVDGKDENCRWCGDGGDLICCDSCSNTFCKSCIKRNLGRTFLHSIEDLGDEDSWNCLICNPSTLIPLQQDCSEIFERIKSINDQLKKRAEIKRNKLSVASRLLNVPASAPKQTGKTPAQSQQKTPISNVLACQIFPKESTTKS-QTEPVKASEVVKSPNVTFSCNSNT-------SEWYLKNADIADILSQISSIQPANIRPVIQSLRFCVETFSCDIKRVEANLAKARTAEEIQAVVSSFQSIYRFHLLGRIANVVARVEDDNKKK 381
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Match: A0A564Z267 (PHD-type domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS11468 PE=4 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 2.886e-47 Identity = 128/430 (29.77%), Postives = 199/430 (46.28%), Query Frame = 1 Query: 67 MRVKQTAKKITS---------TGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNE-SRRKSQIKTSK----KPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGT----EWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDED 1302 MR K A K+T +G V + P +Q S + E S+ V I D G+ L DGT V++PA V++ + S + Q + + F Q+ S D TV+CT+C L+++P++ HP L VILC C++ F D D K+ CRWC +GG LICCD C+ ++CK+CIKRNLGRT L I + D W C C+P+P+ LQ+ C ++F V ++ E +R+KS++K ++ P + + + SISK + P V P + T ++YL+N ++ IL I + + I S + C+E F +DIR E ++A + +I V F+S+YR+H+ NR + R+ ED Sbjct: 5 MRKKSVATKLTMHPDFISTGLSGTPVANDVPPSEQSSIISEVGTKNKEQSNENVIIST----DSSGHMTLSDGTPVVQPADVTDTTDYSLQLDLQDGV--LPRRPFSNSFQIGSID----------------------------TVRCTSCALRISPFACTV---HPHLSVILCKKCLKFYGKGEFA-KDADGKDENCRWCGDGGDLICCDSCANTFCKSCIKRNLGRTFLQSIEDLPDDASWYCLICNPSPLVPLQQECAEVFDRVKALTEQARKKSEMKRNRPVVQAPPRPTQKPTAQDSISKPNNQDPPPIATVVNMKFPEPRVTVSVKGKTAPVTCNSVDFYLKNASISGILDQISNITPENFKEVIRSIRFCMETFSNDIRRAEASFTRARNIEEIQTTVRTFQSIYRYHLLNRLGNVVLRVKED 396
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Match: A0A0R3SSW3 (Uncharacterized protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS8424 PE=4 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.930e-44 Identity = 128/430 (29.77%), Postives = 199/430 (46.28%), Query Frame = 1 Query: 67 MRVKQTAKKITS---------TGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNE-SRRKSQIKTSK----KPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGT----EWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDED 1302 MR K A K+T +G V + P +Q S + E S+ V I D G+ L DGT V++PA V++ + S + Q + + F Q+ S D TV+CT+C L+++P++ HP L VILC C++ F D D K+ CRWC +GG LICCD C+ ++CK+CIKRNLGRT L I + D W C C+P+P+ LQ+ C ++F V ++ E +R+KS++K ++ P + + + SISK + P V P + T ++YL+N ++ IL I + + I S + C+E F +DIR E ++A + +I V F+S+YR+H+ NR + R+ ED Sbjct: 130 MRKKSVATKLTMHPDFISTGLSGTPVANDVPPSEQSSIISEVGTKNKEQSNENVIIST----DSSGHMTLSDGTPVVQPADVTDTTDYSLQLDLQDGV--LPRRPFSNSFQIGSID----------------------------TVRCTSCALRISPFACTV---HPHLSVILCKKCLKFYGKGEFA-KDADGKDENCRWCGDGGDLICCDSCANTFCKSCIKRNLGRTFLQSIEDLPDDASWYCLICNPSPLVPLQQECAEVFDRVKALTEQARKKSEMKRNRPVVQAPPRPTQKPTAQDSISKPNNQDPPPIATVVNMKFPEPRVTVSVKGKTAPVTCNSVDFYLKNASISGILDQISNITPENFKEVIRSIRFCMETFSNDIRRAEASFTRARNIEEIQTTVRTFQSIYRYHLLNRLGNVVLRVKED 521
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Match: A0A068W8I6 (Transcriptional regulator ATRX OS=Echinococcus granulosus OX=6210 GN=EgrG_000868500 PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.102e-43 Identity = 107/362 (29.56%), Postives = 189/362 (52.21%), Query Frame = 1 Query: 226 DMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEI--LNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSV-NESRRKSQIKTSKKPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDED 1302 D GN L DGT V++PA V E + F +Q+ + +KP+ + + T +CT+C ++++P++ HP L VI+C C++ F D D K+ CRWC +GG LICCD CS ++CK+CIKRNLGR+ L +I LN DDS W C C+P+ + LQ+ C ++F + S+ +++++++++K ++ P+ T K ++S+ + Q + V+ + + + ++ N EWYL + ++ IL I + + + S + CVE F +DI+ +E +S+A + ++ AIV F+S+YR H+ R + + +R++ D Sbjct: 48 DATGNIVLSDGTPVVQPAGVEET-------------QGCSFQFDLQDGVLP----------------RKPLASAF-QIGGVDTARCTSCAVRISPFA---CAMHPHLSVIVCKRCLKFYGKGEFA-RDVDGKDENCRWCGDGGDLICCDSCSNTFCKSCIKRNLGRSFLQDIEDLNDDDS--WNCLICNPSVLVPLQQECLEVFERIKSLKDQAKKRAELKRNRLPIPITPRTAGK-AVSQTAAKPSQDSSKVSTAVKTSNSCLSNNYNT----CEWYLEHTSVAGILNQISSIHPPIIRPVVQSLRFCVETFSNDIKRVEANLSRARTLEEVQAIVHSFQSIYRFHLLGRIANVVSRVNTD 368
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Match: A0A158QGM7 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS355 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.295e-43 Identity = 129/463 (27.86%), Postives = 211/463 (45.57%), Query Frame = 1 Query: 1 FTFSISNFAVAFFKN*IFFCYIMRVKQTAKKITSTGEEVDS--------SSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNE-SRRKSQIK----------------TSKKPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDEDKKTR 1314 F FS+ A+ F + + MR K A K++ + + + + VP ++ + ++ +N SE I+ D+ G L DGT V++PA V + + S + Q + + F Q+ S D TVKCT+C L+++P+ HP L VILC C++ F D D K+ CRWC +GG LICCD CS ++CK+CIKRNLGRT L I + D W C CDP+P+ LQ C ++F V ++ E +R++S++K T++ P + + N + P+ + V+ T N ++YL+N ++ IL I + + I S + C+E F +DIR E +KA + +I V F+S++R+H+ +RF+ + R++E+ R Sbjct: 253 FVFSVD--AILF--DELLVLTGMRKKSVATKLSIHPDFISTELAGVSFTTDVPSSEQPSRIFKAETENIEQSSESVIIST---DISGKMTLPDGTPVVQPADVGDTTDYSLQYDLQDGV--LPRRPFSNSFQIGSVD----------------------------TVKCTSCALRMSPFGCTV---HPKLGVILCKKCLKFYGKGEFA-KDTDGKDENCRWCGDGGDLICCDSCSNTFCKSCIKRNLGRTFLQNIEDLPDGASWYCLICDPSPLVPLQRECAEVFDRVKALAEQARKRSEMKRNRPFVQAPSKTTLIPTTQDPGSKPNNQNPPYIATVINMEFPEPRVTVSTKGQTAPVTCN--------SVDFYLKNASIAGILDQISTITPDNFTEVIRSIRFCMETFSNDIRRAETSFTKATNREEIQTTVKTFQSIFRYHLLSRFANVVLRVNEEIAKR 666
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 136.732 bits (343), Expect = 1.064e-32 Identity = 75/225 (33.33%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 226 DMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSK 888 DMDG L + T+V+EP PVS + +F N G + +K + P V CTAC ++N + +S+H+HP L+V++C +C +Y++ DD ED + CRWC EGG+L+CCD+CS ++CK CI RNLGR LS I+N+D +W C+ C P P+ + AC KI ++ E ++K+++ K Sbjct: 51 DMDG---LPEDTVVVEPEPVS-----------NEGKDDFKGPEF-------------RNRG---SKVKDEVPRRQPDEKLQEIVNCTACGKQVNHFHKDSVHQHPALKVLICKSCF-----RYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSGIMNED--SKWHCYVCSPEPLNDIVAACEKILQNL----ECKKKAKVDGEK 234
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 135.961 bits (341), Expect = 4.418e-32 Identity = 75/225 (33.33%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 226 DMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSK 888 DMDG L + T+V+EP PVS + + + F N G + +K + P V CTAC ++N + +S+H+HP L+V++C +C +Y++ DD ED + CRWC EGG+L+CCD+CS ++CK CI RNLGR LS I+N+D +W C+ C P P+ + AC KI ++ E ++K+++ K Sbjct: 51 DMDG---LPEDTVVVEPEPVS--------NEGKDDFKGPEF----------------RNRG---SKVKDEVPRRQPDEKLQEIVNCTACGKQVNHFHKDSVHQHPALKVLICKSCF-----RYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSGIMNEDS--KWHCYVCSPEPLNDIVAACEKILQNL----ECKKKAKVDGEK 234
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Match: atrx (ATRX chromatin remodeler [Source:ZFIN;Acc:ZDB-GENE-030912-11]) HSP 1 Score: 135.961 bits (341), Expect = 4.448e-32 Identity = 75/225 (33.33%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 226 DMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSK 888 DMDG L + T+V+EP PVS + + + F N G + +K + P V CTAC ++N + +S+H+HP L+V++C +C +Y++ DD ED + CRWC EGG+L+CCD+CS ++CK CI RNLGR LS I+N+D +W C+ C P P+ + AC KI ++ E ++K+++ K Sbjct: 51 DMDG---LPEDTVVVEPEPVS--------NEGKDDFKGPEF----------------RNRG---SKVKDEVPRRQPDEKLQEIVNCTACGKQVNHFHKDSVHQHPALKVLICKSCF-----RYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLGRKELSGIMNEDS--KWHCYVCSPEPLNDIVAACEKILQNL----ECKKKAKVDGEK 234
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Match: atrxl (ATRX chromatin remodeler, like [Source:ZFIN;Acc:ZDB-GENE-030131-2019]) HSP 1 Score: 114.39 bits (285), Expect = 1.797e-25 Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQ 873 V CTAC ++N + +S+++HP L+V++C +C KY++ DD + + C WC EGGSLI CD+CS ++CK C+ RNLGR LS IL ++ +W C+ C P P+ L AC + ++ + S+R SQ Sbjct: 145 VNCTACGQQVNHFQRDSVYQHPALKVLICKSCF-----KYYMSDDISKDSEGMDEQC-WCAEGGSLIGCDYCSNAFCKKCVLRNLGRRELSSILEEER--KWYCYVCSPEPLMDLVLACDSVLQNLEKM--SKRSSQ 271
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Match: atrxl (ATRX chromatin remodeler, like [Source:ZFIN;Acc:ZDB-GENE-030131-2019]) HSP 1 Score: 91.2781 bits (225), Expect = 2.430e-18 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 589 KYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQ 873 KY++ DD + + CRWC EGGSLI CD+CS ++CK C+ RNLGR LS IL ++ +W C+ C P P+ L AC + ++ + S+R SQ Sbjct: 203 KYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKKCVLRNLGRRELSSILEEER--KWYCYVCSPEPLMDLVLACDSVLQNLEKM--SKRSSQ 297
BLAST of Transcriptional regulator ATRX vs. Ensembl Nematostella
Match: EDO44497 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVR7]) HSP 1 Score: 113.235 bits (282), Expect = 1.819e-25 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSC---DPTP-IKMLQEACTKIFADVNSVNESRRKSQIKT 882 V CTAC +NP S + +HP L V++C C + F DE E CRWC +GG+LICCD C K++C+ CIKRN G+ L E++N D W CFSC +P P + LQ+ C + ++S+ RK+ K+ Sbjct: 242 VTCTACGRHINP-SHGKILRHPTLNVLVCKKCNQYYNSGPFT-RDEYGIEEQCRWCGDGGALICCDKCEKAFCQPCIKRNCGKAYLKEVMNAPDDYHWNCFSCKLNNPLPAVAQLQKRCNYVMDILDSLRS--RKAPFKS 377 HSP 2 Score: 113.235 bits (282), Expect = 1.819e-25 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSC---DPTP-IKMLQEACTKIFADVNSVNESRRKSQIKT 882 V CTAC +NP S + +HP L V++C C + F DE E CRWC +GG+LICCD C K++C+ CIKRN G+ L E++N D W CFSC +P P + LQ+ C + ++S+ RK+ K+ Sbjct: 708 VTCTACGRHINP-SHGKILRHPTLNVLVCKKCNQYYNSGPFT-RDEYGIEEQCRWCGDGGALICCDKCEKAFCQPCIKRNCGKAYLKEVMNAPDDYHWNCFSCKLNNPLPAVAQLQKRCNYVMDILDSLRS--RKAPFKS 843
BLAST of Transcriptional regulator ATRX vs. Ensembl Nematostella
Match: EDO34131 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ72]) HSP 1 Score: 49.2914 bits (116), Expect = 6.236e-6 Identity = 44/175 (25.14%), Postives = 74/175 (42.29%), Query Frame = 1 Query: 337 AIGFAQFIQEM----QVSS------ADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPY-----------SSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKET---LCRWCVEGGSLICCD--FCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSC 783 A GFA ++E VSS AD+ N ++ KP+ P N + +K T KL Y +HP+ E LC C ++ + ++ D++ + + C C +G + CD C +SYC C++ GR + EI +++ +W C+ C Sbjct: 123 ASGFAPTLEETIFLPPVSSDSDEEEADQTVNGSESTKGRFGKPVKEP----NLVQDIKGTCMVFKLIMYVFMLDICLACGDCKVYAQHPLFEGGLCKECKQSFLECTYLFDEDGYQASGGMYCTICGDGQEVFMCDNEGCFRSYCGPCLEMLAGRGTVREIASRE---KWICYMC 290
BLAST of Transcriptional regulator ATRX vs. Ensembl Medaka
Match: ENSORLT00000011524.2 (transcriptional regulator ATRX [Source:NCBI gene;Acc:101171430]) HSP 1 Score: 130.954 bits (328), Expect = 1.718e-30 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 475 VKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYF----IIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSV-NESRRKSQIKTSKKPL 897 V CTAC ++N + +SL++HPVL+V++C C KY+ I D D + CRWC EGG+LICCDFCS ++CK CI RNLGR LS IL +W C+ C P P+ L AC + ++ SV ++ R++S+++ K L Sbjct: 152 VTCTACGRQVNHFQRDSLYQHPVLKVLICKACY-----KYYSSDEISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSGILES----KWYCYVCSPEPLFDLVTACNHVLENMESVWSQQRKRSRVEPEKSGL 288
BLAST of Transcriptional regulator ATRX vs. Ensembl Medaka
Match: atrx (ATRX chromatin remodeler [Source:NCBI gene;Acc:101162138]) HSP 1 Score: 113.62 bits (283), Expect = 3.973e-25 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 448 IPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDD----EDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNKK 924 +P V CTAC ++N + NS+ +HP L+V++C +C Y+ DD D + CRWC EGG LICCD+C+ ++CK CI RNLGR LS I D++ +W C+ C P+ L C +I + ++K++ + +R T K+ Sbjct: 102 LPDDTLQKKVSCTACGKQVNQFQRNSVCEHPALKVLICKSCY-----NYYTSDDISKDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKCILRNLGRKELSNIT--DENSKWHCYVCRSEPLHDLVFKCWRIMEKLEHDQLKQQKTEKGEERDSKKRKSRTTKE 257
BLAST of Transcriptional regulator ATRX vs. Planmine SMEST
Match: SMESG000008550.1 (SMESG000008550.1) HSP 1 Score: 1088.95 bits (2815), Expect = 0.000e+0 Identity = 579/582 (99.48%), Postives = 579/582 (99.48%), Query Frame = 1 Query: 67 MRVKQTAKKITSTGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDEDKKTRFVPQTLNGGNSGNTPSQKDVTQNSVIPNLLINSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRIINQTFTPNLIAKGVRQLSNGERHSLPAMMSIDLTDDADKFDIPSKRRIVDKIIEKVAEEILQKPNEEVVDLCNDDDVSYPIVRMNINNQLFGSADTSS 1812 MRVKQTAKKITSTGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNKKRSISKAFSTVPQK MNVNQSSNPNLNTINLLNNMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDEDKKTRFVPQTLNGGNSGNTPSQKDVTQNSVIPNLLINSVISTPSPT TTPTSIITTT TAAATAPSNTINRRIINQTFTPNLIAKGVRQLSNGERHSLPAMMSIDLTDDADKFDIPSKRRIVDKIIEKVAEEILQKPNEEVVDLCNDDDVSYPIVRMNINNQLFGSADTSS Sbjct: 1 MRVKQTAKKITSTGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVECRRDMDGNQFLLDGTLVIEPAPVSENVNPSEEKSRQANLEAIGFAQFIQEMQVSSADKLSNNHGHSQNSIKKPIFTPIPSTNSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKETLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNKKRSISKAFSTVPQKPMNVNQSSNPNLNTINLLNNMEGFGTEWYLRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTDILAIVSMFKSVYRHHIFNRFSQIQTRIDEDKKTRFVPQTLNGGNSGNTPSQKDVTQNSVIPNLLINSVISTPSPTTTTPTSIITTTPTAAATAPSNTINRRIINQTFTPNLIAKGVRQLSNGERHSLPAMMSIDLTDDADKFDIPSKRRIVDKIIEKVAEEILQKPNEEVVDLCNDDDVSYPIVRMNINNQLFGSADTSS 582
BLAST of Transcriptional regulator ATRX vs. Planmine SMEST
Match: SMESG000065439.1 (SMESG000065439.1) HSP 1 Score: 86.6557 bits (213), Expect = 1.054e-17 Identity = 77/290 (26.55%), Postives = 139/290 (47.93%), Query Frame = 1 Query: 460 NSLVTVKCTACNLKLNPYSSNSLHKHPVLEVILCHNCIENQKDKYFIIDDEDNKE--TLCRWCVEGGSLICCDFCSKSYCKTCIKRNLGRTVLSEILNQDDSVQWKCFSCDPTPIKMLQEACTKIFADVNSVNESRRKSQIKTSKKPLQRMESTNKKRSISKAFSTVPQKTMNVNQSSXXXXXXXXXXXXMEGFGTEWY----LRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTD---ILAIVSMFKSVYRHHIFNRFSQIQTRIDED 1302 N+ ++ KCT C K+ + +++H +L+VI+C +C + ++D N+ T C WC + + C C+ C CI NLG + + N + W CF C+ I+ +Q+ K+ +S +K +PL E + IS F +V + +S +LN+ +L + + + L + N+ +I++ I+ + + L AI KKC+ AF SD+ LE+ I+ A ++ + + + S+ + + +HHIFNR S + RI ED Sbjct: 7 NNFISSKCTIC-YKI----TEDIYQHALLKVIICKDC-------FVVVDPILNEPEVTNCIWCTQNKETLQCARCNYKCCYDCINSNLGVSYI----NCVNEKNWLCFVCESMQIETMQQEYVKL------------RSLMKNDIEPLIP-EGASSSIDISSPFVSVDESDNFTKKSHRKSLNSQDLDAILNTYEKQMKASLELEDSNVPSIISEINSITNDQLSVAILCFKKCLSAFSSDLAILESRIADATATHNQSMLNKLTSLLRILIQHHIFNRLSHPKARIRED 267
BLAST of Transcriptional regulator ATRX vs. Planmine SMEST
Match: SMESG000065439.1 (SMESG000065439.1) HSP 1 Score: 50.8322 bits (120), Expect = 1.743e-6 Identity = 30/87 (34.48%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 1051 LRNVNLENILTGIDKVDSRSLLNAINSTKKCVEAFYSDIRNLENEISKAASSTD---ILAIVSMFKSVYRHHIFNRFSQIQTRIDED 1302 L + N+ +I++ I+ + + L AI KKC+ AF SD+ LE+ I+ A ++ + + + S+ + + +HHIFNR S + RI ED Sbjct: 79 LEDSNVPSIISEINSITNDQLSVAILCFKKCLSAFSSDLAILESRIADATATHNQSMLNKLTSLLRILIQHHIFNRLSHPKARIRED 165 The following BLAST results are available for this feature:
BLAST of Transcriptional regulator ATRX vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Transcriptional regulator ATRX vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Transcriptional regulator ATRX vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Transcriptional regulator ATRX vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Transcriptional regulator ATRX vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Transcriptional regulator ATRX vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Transcriptional regulator ATRX vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Transcriptional regulator ATRX vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019981 ID=SMED30019981|Name=Transcriptional regulator ATRX|organism=Schmidtea mediterranea sexual|type=transcript|length=2450bpback to top protein sequence of SMED30019981-orf-1 >SMED30019981-orf-1 ID=SMED30019981-orf-1|Name=SMED30019981-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=583bp MRVKQTAKKITSTGEEVDSSSVPLDQESTNNHNSDNQNEMSDSEVEIVVEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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