Beta-catenin
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30019916 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12Note: Hover over icons to view figure legend
Homology
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 53.9138 bits (128), Expect = 1.253e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Fly
Match: arm (gene:FBgn0000117 transcript:FBtr0089990) HSP 1 Score: 49.6766 bits (117), Expect = 9.527e-6 Identity = 31/103 (30.10%), Postives = 49/103 (47.57%), Query Frame = 3 Query: 690 GCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 G H +S G + K+ L+ +L+ +++V+FY+ITTLHN+LL V L + ++ + + K LAI DCL L+Y N K Sbjct: 224 GTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVTLLQR------NNVKFLAIVTDCLQILAYGNQESK 320
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]) HSP 1 Score: 54.299 bits (129), Expect = 4.694e-7 Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 3 Query: 483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 L +D + AA+ + QL R KE +L S ++ ++ A++ ++ + + H +S G + K+ L+ ML+ +++V+FY+ITTLHN+LL V L + + ++ + K T K LAI DCL LSY N K Sbjct: 133 LADDDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVSAVVRAMQ-NTGDLETARCAASVLHSLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 285
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb1 (catenin (cadherin-associated protein), beta 1 [Source:NCBI gene;Acc:30265]) HSP 1 Score: 54.6842 bits (130), Expect = 4.697e-7 Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 SG H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]) HSP 1 Score: 54.299 bits (129), Expect = 5.171e-7 Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 3 Query: 483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 L +D + AA+ + QL R KE +L S ++ ++ A++ ++ + + H +S G + K+ L+ ML+ +++V+FY+ITTLHN+LL V L + + ++ + K T K LAI DCL LSY N K Sbjct: 138 LADDDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVSAVVRAMQ-NTGDLETARCAASVLHSLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 290
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb1 (catenin (cadherin-associated protein), beta 1 [Source:NCBI gene;Acc:30265]) HSP 1 Score: 54.299 bits (129), Expect = 5.455e-7 Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 SG H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb2 (catenin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2575]) HSP 1 Score: 53.9138 bits (128), Expect = 8.007e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961]) HSP 1 Score: 54.6842 bits (130), Expect = 4.545e-7 Identity = 34/105 (32.38%), Postives = 50/105 (47.62%), Query Frame = 3 Query: 684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 TAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961]) HSP 1 Score: 53.5286 bits (127), Expect = 1.354e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 178 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 275
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961]) HSP 1 Score: 53.5286 bits (127), Expect = 1.391e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961]) HSP 1 Score: 53.5286 bits (127), Expect = 1.444e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961]) HSP 1 Score: 53.1434 bits (126), Expect = 1.632e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 197 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 294
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276]) HSP 1 Score: 53.5286 bits (127), Expect = 9.921e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276]) HSP 1 Score: 53.5286 bits (127), Expect = 9.921e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276]) HSP 1 Score: 52.7582 bits (125), Expect = 1.680e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|F1QGH7|CTNB1_DANRE (Catenin beta-1 OS=Danio rerio OX=7955 GN=ctnnb1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 4.118e-6 Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 SG H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|P26233|CTNB1_XENLA (Catenin beta-1 OS=Xenopus laevis OX=8355 GN=ctnnb1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.593e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|Q9WU82|CTNB1_RAT (Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.822e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|Q02248|CTNB1_MOUSE (Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.940e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|B6V8E6|CTNB1_CANLF (Catenin beta-1 OS=Canis lupus familiaris OX=9615 GN=CTNNB1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 7.059e-6 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. TrEMBL
Match: A0A1S6KMF7 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 2 Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK Sbjct: 319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566 HSP 2 Score: 506.908 bits (1304), Expect = 0.000e+0 Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 Query: 360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL Sbjct: 36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
BLAST of Beta-catenin vs. TrEMBL
Match: A0A291LM11 (B-catenin 3 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 509.605 bits (1311), Expect = 0.000e+0 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 2 Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQ+FLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK Sbjct: 319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQVFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566 HSP 2 Score: 506.523 bits (1303), Expect = 0.000e+0 Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 Query: 360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL Sbjct: 36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
BLAST of Beta-catenin vs. TrEMBL
Match: A0A159X4H1 (CTNNB1-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=CTNNB1 PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 6.372e-155 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 2 Query: 1271 FWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951 FWKVY DVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNL YFEGIKK Sbjct: 1 FWKVYXDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLAYFEGIKK 227
BLAST of Beta-catenin vs. TrEMBL
Match: A0A291LM10 (B-catenin 4 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.039e-16 Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +T I K+I+ Q+ + + +I F+I+G++S DT + SA VF+W+L + + Y +E +L +L+ S++ + S + ++V G FHY S++ GCE +L+ + D L+ M+ VV+YS T +HNIL+ P + ++++I ++ P + ++K +L I ID LS L+ N+A K Sbjct: 45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
BLAST of Beta-catenin vs. TrEMBL
Match: A0A1S6KMF0 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.172e-16 Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +T I K+I+ Q+ + + +I F+I+G++S DT + SA VF+W+L + + Y +E +L +L+ S++ + S + ++V G FHY S++ GCE +L+ + D L+ M+ VV+YS T +HNIL+ P + ++++I ++ P + ++K +L I ID LS L+ N+A K Sbjct: 45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]) HSP 1 Score: 55.8398 bits (133), Expect = 1.526e-7 Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 Query: 483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 L D + AA+ + QL R KE +L S ++ ++ AL+ + H +S G + K+ L+ ML+ +++V+FYSITTLHN+LL V L + + ++ + K T K LAI DCL LSY N K Sbjct: 135 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 286
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]) HSP 1 Score: 55.8398 bits (133), Expect = 1.641e-7 Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 Query: 483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 L D + AA+ + QL R KE +L S ++ ++ AL+ + H +S G + K+ L+ ML+ +++V+FYSITTLHN+LL V L + + ++ + K T K LAI DCL LSY N K Sbjct: 119 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 270
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]) HSP 1 Score: 55.4546 bits (132), Expect = 1.827e-7 Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 Query: 483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 L D + AA+ + QL R KE +L S ++ ++ AL+ + H +S G + K+ L+ ML+ +++V+FYSITTLHN+LL V L + + ++ + K T K LAI DCL LSY N K Sbjct: 96 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 247
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:103035854]) HSP 1 Score: 53.5286 bits (127), Expect = 7.538e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: ctnnb2 (catenin beta-1-like [Source:NCBI gene;Acc:103034575]) HSP 1 Score: 53.5286 bits (127), Expect = 7.717e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 56.225 bits (134), Expect = 2.333e-8 Identity = 35/106 (33.02%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 681 WVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 + +G H +S G + K+ L+ +L+C +++V+FY+ITTLHN+LL V L + ++ ++K G KF LAI DCL L+Y N K Sbjct: 211 YAAGALHNLSHHRQGLLAIFKSGGIPALVKLLSCPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLNK----GNVKF--LAITTDCLQLLAYGNQESK 310
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 55.8398 bits (133), Expect = 3.055e-8 Identity = 35/104 (33.65%), Postives = 51/104 (49.04%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML+ +++VVFY+ITTLHN+LL V L + ++ + L T K LAI DCL L+Y N K Sbjct: 214 AGTLHSLSHHQQGLLTIFKSGGIPALVKMLSSPVESVVFYAITTLHNLLLHQEGSKMAVRLAGGLQKMV------ALLNRTNVKFLAITTDCLQILAYGNQESK 311
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 54.6842 bits (130), Expect = 3.995e-8 Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 3 Query: 684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ +L+C +++V+FY+ITTLHN+LL V L + ++ ++K K LAI DCL L+Y N K Sbjct: 212 AAGALHNLSHHRQGLLAIFKSGGIPALVKLLSCPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLNK------NNVKFLAITTDCLQLLAYGNQESK 310
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]) HSP 1 Score: 51.2174 bits (121), Expect = 8.379e-7 Identity = 33/105 (31.43%), Postives = 50/105 (47.62%), Query Frame = 3 Query: 684 VSGCFHYISR-TPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H ++ TP + L+ ML+ +++VVFYSITTLH++LL V L + ++ + L T K LAI DCL L++ N K Sbjct: 209 TAGTLHNLAHDTPGRLAIFKSGGIPALVKMLSSPVESVVFYSITTLHHLLLNQEGSKMAVRLAGGLQKMV------ALLNRTNEKFLAITTDCLQILAFGNQESK 307
BLAST of Beta-catenin vs. Ensembl Nematostella
Match: EDO35728 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKL8]) HSP 1 Score: 59.3066 bits (142), Expect = 1.607e-9 Identity = 35/105 (33.33%), Postives = 51/105 (48.57%), Query Frame = 3 Query: 684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ +L +++AVVFY+ITTLHN+LL V L + ++ + LG K LAI DCL L+Y N K Sbjct: 200 AAGTLHNLSHHRQGLLSIFKSGGIPALVKLLGSQVEAVVFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV------ALLGRGNVKFLAIVTDCLHVLAYGNQESK 298
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738]) HSP 1 Score: 53.5286 bits (127), Expect = 8.962e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738]) HSP 1 Score: 53.1434 bits (126), Expect = 9.637e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738]) HSP 1 Score: 53.1434 bits (126), Expect = 9.637e-7 Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ ++K T K LAI DCL L+Y N K Sbjct: 215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ENSORLT00000004536.2 (catenin beta-1 [Source:NCBI gene;Acc:101171502]) HSP 1 Score: 52.373 bits (124), Expect = 1.763e-6 Identity = 34/104 (32.69%), Postives = 49/104 (47.12%), Query Frame = 3 Query: 687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +G H +S G + K+ L+ ML + +V+FY+ITTLHN+LL V L + ++ + L T K LAI DCL L+Y N K Sbjct: 208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV------ALLSNTNVKFLAITTDCLQILAYGNQESK 305
BLAST of Beta-catenin vs. Ensembl Medaka
Match: jupa (junction plakoglobin [Source:NCBI gene;Acc:101173369]) HSP 1 Score: 50.447 bits (119), Expect = 7.526e-6 Identity = 44/169 (26.04%), Postives = 75/169 (44.38%), Query Frame = 3 Query: 492 NDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 D F+ AA + QL R KE L S ++ ++ A++ ++ + + H +S G + K++ L+ ML+ +++V+FY+ITTLHN+LL V L + + ++ + K + K LAI DCL LS+ N K Sbjct: 134 EDQFVVSRAAQIVNQLSR------------KEASRQALMQSPQMVAAVVRAMQ-NTSDMETTRATASIMHNLSHKREGLLAIFKSSGIPALVRMLSSPMESVLFYAITTLHNLLLHQDGAKMAVRLADGLQRMVPLLKK------SNPKFLAITTDCLQLLSFGNQESK 283
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000022923.1 (SMESG000022923.1) HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 2 Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK Sbjct: 319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566 HSP 2 Score: 506.908 bits (1304), Expect = 0.000e+0 Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 Query: 360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL Sbjct: 36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000035212.1 (SMESG000035212.1) HSP 1 Score: 95.5153 bits (236), Expect = 3.118e-20 Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 +T I K+I+ Q+ + + +I F+I+G++S DT + SA VF+W+L + + Y +E +L +L+ S++ + S + ++V G FHY S++ GCE +L+ + D L+ M+ VV+YS T +HNIL+ P + ++++I ++ P + ++K +L I ID LS L+ N+A K Sbjct: 45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000039528.1 (SMESG000039528.1) HSP 1 Score: 49.6766 bits (117), Expect = 8.378e-6 Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 669 QMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 + + +++G + +S+ G +++ + N L+ +L +++V+FY+ITTLHN+LL V + CI ++ + K K L IC DCL L++++ K Sbjct: 198 EAVRFLAGAIYNMSQKKNGLKIIFEANVIPCLVKLLGFSMESVLFYAITTLHNLLLYQDGGKEAVRSSGCIPKMVALLQK------NNIKFLTICTDCLQILAFNHQPSK 301
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000039528.1 (SMESG000039528.1) HSP 1 Score: 49.6766 bits (117), Expect = 8.519e-6 Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 669 QMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995 + + +++G + +S+ G +++ + N L+ +L +++V+FY+ITTLHN+LL V + CI ++ + K K L IC DCL L++++ K Sbjct: 197 EAVRFLAGAIYNMSQKKNGLKIIFEANVIPCLVKLLGFSMESVLFYAITTLHNLLLYQDGGKEAVRSSGCIPKMVALLQK------NNIKFLTICTDCLQILAFNHQPSK 300 The following BLAST results are available for this feature:
BLAST of Beta-catenin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Beta-catenin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Beta-catenin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Beta-catenin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Beta-catenin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Beta-catenin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Beta-catenin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Beta-catenin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Beta-catenin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of Beta-catenin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Beta-catenin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Beta-catenin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Beta-catenin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30019916 ID=SMED30019916|Name=Beta-catenin|organism=Schmidtea mediterranea sexual|type=transcript|length=2324bpback to top protein sequence of SMED30019916-orf-1 >SMED30019916-orf-1 ID=SMED30019916-orf-1|Name=SMED30019916-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=246bp MFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVback to top protein sequence of SMED30019916-orf-2 >SMED30019916-orf-2 ID=SMED30019916-orf-2|Name=SMED30019916-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=324bp MDLSAQIDSSSIFFDWDDDSSTESDSGISSVSSDSFVNPFDHNDSSFISTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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