Beta-catenin

Overview
NameBeta-catenin
Smed IDSMED30019916
Length (bp)2324
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Beta-catenin (SMED30019916) t-SNE clustered cells

Violin plots show distribution of expression levels for Beta-catenin (SMED30019916) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Beta-catenin (SMED30019916) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Beta-catenin (SMED30019916) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30019916

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 12

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
central nervous systemSMED30019916SMESG000022923.1 dd_Smed_v4_9667_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
posterior region of the whole animalSMED30019916SMESG000022923.1 dd_Smed_v4_9667_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016		whole organism asexual adult colorimetric in situ hybridization evidence
posterior region of the whole animalSMED30019916SMESG000022923.1 dd_Smed_v4_9667_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
tail regionSMED30019916SMESG000022923.1 dd_Smed_v4_9667_0_1dd_Smed_v4PMID:27063937
Scimone et al., 2016		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
tail regionSMED30019916SMESG000022923.1 SmedASXL_013363SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parenchymal cellSMED30019916SMESG000022923.1 dd_Smed_v4_9667_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
tail regionSMED30019916SMESG000022923.1 dd_Smed_v6_9667_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
central nervous systemSMED30019916SMESG000022923.1 KY196224.1smed_ncbi_20200123PMID:28976975
Su et al., 2017		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymal cellSMED30019916SMESG000022923.1 KY196224.1smed_ncbi_20200123PMID:28976975
Su et al., 2017		whole organism asexual adult colorimetric in situ hybridization evidence
cephalic gangliaSMED30019916SMESG000022923.1 KT983970.1smed_ncbi_20200123PMID:18063757
Gurley et al., 2008		whole organism asexual adult colorimetric in situ hybridization evidence
ventral nerve cordSMED30019916SMESG000022923.1 KT983970.1smed_ncbi_20200123PMID:18063757
Gurley et al., 2008		whole organism asexual adult colorimetric in situ hybridization evidence
posterior region of the whole animalSMED30019916SMESG000022923.1 KT983970.1smed_ncbi_20200123PMID:18063757
Gurley et al., 2008		whole organism asexual adult colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 53.9138 bits (128), Expect = 1.253e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Human
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 53.5286 bits (127), Expect = 1.392e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Fly
Match: arm (gene:FBgn0000117 transcript:FBtr0089990)

HSP 1 Score: 49.6766 bits (117), Expect = 9.527e-6
Identity = 31/103 (30.10%), Postives = 49/103 (47.57%), Query Frame = 3 
Query:  690 GCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            G  H +S    G   + K+     L+ +L+  +++V+FY+ITTLHN+LL        V L   +  ++  + +         K LAI  DCL  L+Y N   K
Sbjct:  224 GTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVTLLQR------NNVKFLAIVTDCLQILAYGNQESK 320
[Close]
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10])

HSP 1 Score: 54.299 bits (129), Expect = 4.694e-7
Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 3 
Query:  483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            L  +D  +   AA+ + QL R            KE    +L  S  ++ ++  A++ ++   +     +   H +S    G   + K+     L+ ML+  +++V+FY+ITTLHN+LL        V L + +  ++  + K      T  K LAI  DCL  LSY N   K
Sbjct:  133 LADDDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVSAVVRAMQ-NTGDLETARCAASVLHSLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 285
[Close]
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb1 (catenin (cadherin-associated protein), beta 1 [Source:NCBI gene;Acc:30265])

HSP 1 Score: 54.6842 bits (130), Expect = 4.697e-7
Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            SG  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10])

HSP 1 Score: 54.299 bits (129), Expect = 5.171e-7
Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 3 
Query:  483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            L  +D  +   AA+ + QL R            KE    +L  S  ++ ++  A++ ++   +     +   H +S    G   + K+     L+ ML+  +++V+FY+ITTLHN+LL        V L + +  ++  + K      T  K LAI  DCL  LSY N   K
Sbjct:  138 LADDDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVSAVVRAMQ-NTGDLETARCAASVLHSLSHQREGLLAIFKSGGIPALVRMLSSPMESVLFYAITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 290
[Close]
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb1 (catenin (cadherin-associated protein), beta 1 [Source:NCBI gene;Acc:30265])

HSP 1 Score: 54.299 bits (129), Expect = 5.455e-7
Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            SG  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Zebrafish
Match: ctnnb2 (catenin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2575])

HSP 1 Score: 53.9138 bits (128), Expect = 8.007e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961])

HSP 1 Score: 54.6842 bits (130), Expect = 4.545e-7
Identity = 34/105 (32.38%), Postives = 50/105 (47.62%), Query Frame = 3 
Query:  684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
             +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 TAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961])

HSP 1 Score: 53.5286 bits (127), Expect = 1.354e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  178 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 275
[Close]
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961])

HSP 1 Score: 53.5286 bits (127), Expect = 1.391e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961])

HSP 1 Score: 53.5286 bits (127), Expect = 1.444e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Xenopus
Match: dctn5 (dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963961])

HSP 1 Score: 53.1434 bits (126), Expect = 1.632e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  197 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 294
[Close]
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276])

HSP 1 Score: 53.5286 bits (127), Expect = 9.921e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276])

HSP 1 Score: 53.5286 bits (127), Expect = 9.921e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Mouse
Match: Ctnnb1 (catenin (cadherin associated protein), beta 1 [Source:MGI Symbol;Acc:MGI:88276])

HSP 1 Score: 52.7582 bits (125), Expect = 1.680e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|F1QGH7|CTNB1_DANRE (Catenin beta-1 OS=Danio rerio OX=7955 GN=ctnnb1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 4.118e-6
Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            SG  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 SGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|P26233|CTNB1_XENLA (Catenin beta-1 OS=Xenopus laevis OX=8355 GN=ctnnb1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.593e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|Q9WU82|CTNB1_RAT (Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.822e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|Q02248|CTNB1_MOUSE (Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.940e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. UniProt/SwissProt
Match: sp|B6V8E6|CTNB1_CANLF (Catenin beta-1 OS=Canis lupus familiaris OX=9615 GN=CTNNB1 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 7.059e-6
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. TrEMBL
Match: A0A1S6KMF7 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 2 
Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951
            WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK
Sbjct:  319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566

HSP 2 Score: 506.908 bits (1304), Expect = 0.000e+0
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 
Query:  360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217
            FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL
Sbjct:   36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
[Close]
BLAST of Beta-catenin vs. TrEMBL
Match: A0A291LM11 (B-catenin 3 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 509.605 bits (1311), Expect = 0.000e+0
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 2 
Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951
            WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQ+FLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK
Sbjct:  319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQVFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566

HSP 2 Score: 506.523 bits (1303), Expect = 0.000e+0
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 
Query:  360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217
            FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL
Sbjct:   36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
[Close]
BLAST of Beta-catenin vs. TrEMBL
Match: A0A159X4H1 (CTNNB1-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=CTNNB1 PE=2 SV=1)

HSP 1 Score: 459.144 bits (1180), Expect = 6.372e-155
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 2 
Query: 1271 FWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951
            FWKVY DVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNL YFEGIKK
Sbjct:    1 FWKVYXDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLAYFEGIKK 227
[Close]
BLAST of Beta-catenin vs. TrEMBL
Match: A0A291LM10 (B-catenin 4 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.039e-16
Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 
Query:  405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +T I K+I+ Q+  + + +I F+I+G++S DT +  SA VF+W+L +  +   Y  +E       +L    +L+ S++  +     S  + ++V G FHY S++  GCE +L+ + D L+ M+      VV+YS T +HNIL+  P      +    ++++I ++  P  + ++K +L  I ID LS L+  N+A K
Sbjct:   45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
[Close]
BLAST of Beta-catenin vs. TrEMBL
Match: A0A1S6KMF0 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.172e-16
Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 
Query:  405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +T I K+I+ Q+  + + +I F+I+G++S DT +  SA VF+W+L +  +   Y  +E       +L    +L+ S++  +     S  + ++V G FHY S++  GCE +L+ + D L+ M+      VV+YS T +HNIL+  P      +    ++++I ++  P  + ++K +L  I ID LS L+  N+A K
Sbjct:   45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
[Close]
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10])

HSP 1 Score: 55.8398 bits (133), Expect = 1.526e-7
Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 
Query:  483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            L   D  +   AA+ + QL R            KE    +L  S  ++ ++  AL+            +   H +S    G   + K+     L+ ML+  +++V+FYSITTLHN+LL        V L + +  ++  + K      T  K LAI  DCL  LSY N   K
Sbjct:  135 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 286
[Close]
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10])

HSP 1 Score: 55.8398 bits (133), Expect = 1.641e-7
Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 
Query:  483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            L   D  +   AA+ + QL R            KE    +L  S  ++ ++  AL+            +   H +S    G   + K+     L+ ML+  +++V+FYSITTLHN+LL        V L + +  ++  + K      T  K LAI  DCL  LSY N   K
Sbjct:  119 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 270
[Close]
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: jupb (junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10])

HSP 1 Score: 55.4546 bits (132), Expect = 1.827e-7
Identity = 48/172 (27.91%), Postives = 73/172 (42.44%), Query Frame = 3 
Query:  483 LISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            L   D  +   AA+ + QL R            KE    +L  S  ++ ++  AL+            +   H +S    G   + K+     L+ ML+  +++V+FYSITTLHN+LL        V L + +  ++  + K      T  K LAI  DCL  LSY N   K
Sbjct:   96 LADEDQVVVNKAALIVNQLTR------------KEASRRVLMQSPQMVAAVVRALQSGDLETSRC--AASVLHSLSHQREGLLAIFKSGGIPTLVRMLSSPMESVLFYSITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKK------TNPKFLAITTDCLQLLSYGNQESK 247
[Close]
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:103035854])

HSP 1 Score: 53.5286 bits (127), Expect = 7.538e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Cavefish
Match: ctnnb2 (catenin beta-1-like [Source:NCBI gene;Acc:103034575])

HSP 1 Score: 53.5286 bits (127), Expect = 7.717e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  214 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 56.225 bits (134), Expect = 2.333e-8
Identity = 35/106 (33.02%), Postives = 55/106 (51.89%), Query Frame = 3 
Query:  681 WVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            + +G  H +S    G   + K+     L+ +L+C +++V+FY+ITTLHN+LL        V L   +  ++  ++K    G  KF  LAI  DCL  L+Y N   K
Sbjct:  211 YAAGALHNLSHHRQGLLAIFKSGGIPALVKLLSCPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLNK----GNVKF--LAITTDCLQLLAYGNQESK 310
[Close]
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 55.8398 bits (133), Expect = 3.055e-8
Identity = 35/104 (33.65%), Postives = 51/104 (49.04%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML+  +++VVFY+ITTLHN+LL        V L   +  ++      + L  T  K LAI  DCL  L+Y N   K
Sbjct:  214 AGTLHSLSHHQQGLLTIFKSGGIPALVKMLSSPVESVVFYAITTLHNLLLHQEGSKMAVRLAGGLQKMV------ALLNRTNVKFLAITTDCLQILAYGNQESK 311
[Close]
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 54.6842 bits (130), Expect = 3.995e-8
Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 3 
Query:  684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
             +G  H +S    G   + K+     L+ +L+C +++V+FY+ITTLHN+LL        V L   +  ++  ++K         K LAI  DCL  L+Y N   K
Sbjct:  212 AAGALHNLSHHRQGLLAIFKSGGIPALVKLLSCPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVALLNK------NNVKFLAITTDCLQLLAYGNQESK 310
[Close]
BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Match: CTNNB1 (catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514])

HSP 1 Score: 51.2174 bits (121), Expect = 8.379e-7
Identity = 33/105 (31.43%), Postives = 50/105 (47.62%), Query Frame = 3 
Query:  684 VSGCFHYISR-TPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
             +G  H ++  TP    +        L+ ML+  +++VVFYSITTLH++LL        V L   +  ++      + L  T  K LAI  DCL  L++ N   K
Sbjct:  209 TAGTLHNLAHDTPGRLAIFKSGGIPALVKMLSSPVESVVFYSITTLHHLLLNQEGSKMAVRLAGGLQKMV------ALLNRTNEKFLAITTDCLQILAFGNQESK 307
[Close]
BLAST of Beta-catenin vs. Ensembl Nematostella
Match: EDO35728 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKL8])

HSP 1 Score: 59.3066 bits (142), Expect = 1.607e-9
Identity = 35/105 (33.33%), Postives = 51/105 (48.57%), Query Frame = 3 
Query:  684 VSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
             +G  H +S    G   + K+     L+ +L  +++AVVFY+ITTLHN+LL        V L   +  ++      + LG    K LAI  DCL  L+Y N   K
Sbjct:  200 AAGTLHNLSHHRQGLLSIFKSGGIPALVKLLGSQVEAVVFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV------ALLGRGNVKFLAIVTDCLHVLAYGNQESK 298
[Close]
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738])

HSP 1 Score: 53.5286 bits (127), Expect = 8.962e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738])

HSP 1 Score: 53.1434 bits (126), Expect = 9.637e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ctnnb1 (catenin beta 1 [Source:NCBI gene;Acc:101166738])

HSP 1 Score: 53.1434 bits (126), Expect = 9.637e-7
Identity = 34/104 (32.69%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++  ++K      T  K LAI  DCL  L+Y N   K
Sbjct:  215 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGNQESK 312
[Close]
BLAST of Beta-catenin vs. Ensembl Medaka
Match: ENSORLT00000004536.2 (catenin beta-1 [Source:NCBI gene;Acc:101171502])

HSP 1 Score: 52.373 bits (124), Expect = 1.763e-6
Identity = 34/104 (32.69%), Postives = 49/104 (47.12%), Query Frame = 3 
Query:  687 SGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +G  H +S    G   + K+     L+ ML   + +V+FY+ITTLHN+LL        V L   +  ++      + L  T  K LAI  DCL  L+Y N   K
Sbjct:  208 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV------ALLSNTNVKFLAITTDCLQILAYGNQESK 305
[Close]
BLAST of Beta-catenin vs. Ensembl Medaka
Match: jupa (junction plakoglobin [Source:NCBI gene;Acc:101173369])

HSP 1 Score: 50.447 bits (119), Expect = 7.526e-6
Identity = 44/169 (26.04%), Postives = 75/169 (44.38%), Query Frame = 3 
Query:  492 NDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
             D F+   AA  + QL R            KE     L  S  ++ ++  A++ ++   +     +   H +S    G   + K++    L+ ML+  +++V+FY+ITTLHN+LL        V L + +  ++  + K      +  K LAI  DCL  LS+ N   K
Sbjct:  134 EDQFVVSRAAQIVNQLSR------------KEASRQALMQSPQMVAAVVRAMQ-NTSDMETTRATASIMHNLSHKREGLLAIFKSSGIPALVRMLSSPMESVLFYAITTLHNLLLHQDGAKMAVRLADGLQRMVPLLKK------SNPKFLAITTDCLQLLSFGNQESK 283
[Close]
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000022923.1 (SMESG000022923.1)

HSP 1 Score: 509.99 bits (1312), Expect = 0.000e+0
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 2 
Query: 1208 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 1951
            WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK
Sbjct:  319 WLVMFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAVGILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYRCLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQSLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLLSGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK 566

HSP 2 Score: 506.908 bits (1304), Expect = 0.000e+0
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 3 
Query:  360 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKXXXXXXXXXXXXXXXNLVAYSNNEXXXXXXXXXXXXXSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNVGWL 1217
            FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV WL
Sbjct:   36 FVNPFDHNDSSFISTVTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQISRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNFAILVLNLFKSKSKMNSNV-WL 320
[Close]
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000035212.1 (SMESG000035212.1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.118e-20
Identity = 60/197 (30.46%), Postives = 109/197 (55.33%), Query Frame = 3 
Query:  405 VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACNMPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHYISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            +T I K+I+ Q+  + + +I F+I+G++S DT +  SA VF+W+L +  +   Y  +E       +L    +L+ S++  +     S  + ++V G FHY S++  GCE +L+ + D L+ M+      VV+YS T +HNIL+  P      +    ++++I ++  P  + ++K +L  I ID LS L+  N+A K
Sbjct:   45 ITEIVKEINSQNPIFIREMILFSINGILSKDTRLSSSALVFIWKLFKLTSSSDYPAVEK------ILFNCPELLSSIKLLIFDQDNSKGLDFYVGGVFHYASKSKIGCEQILEYSIDGLLEMIKSTSPPVVYYSFTCMHNILMNIPKSRELFNKNYDLSSLIQRLICPDEIFKSKLEL--ITIDMLSRLATENDANK 233
[Close]
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000039528.1 (SMESG000039528.1)

HSP 1 Score: 49.6766 bits (117), Expect = 8.378e-6
Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 3 
Query:  669 QMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            + + +++G  + +S+   G +++ + N    L+ +L   +++V+FY+ITTLHN+LL        V  + CI  ++  + K         K L IC DCL  L++++   K
Sbjct:  198 EAVRFLAGAIYNMSQKKNGLKIIFEANVIPCLVKLLGFSMESVLFYAITTLHNLLLYQDGGKEAVRSSGCIPKMVALLQK------NNIKFLTICTDCLQILAFNHQPSK 301
[Close]
BLAST of Beta-catenin vs. Planmine SMEST
Match: SMESG000039528.1 (SMESG000039528.1)

HSP 1 Score: 49.6766 bits (117), Expect = 8.519e-6
Identity = 30/110 (27.27%), Postives = 58/110 (52.73%), Query Frame = 3 
Query:  669 QMLYWVSGCFHYISRTPFGCEMLLKNNS-DILISMLNCELQAVVFYSITTLHNILLTCPCPYRGVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVK 995
            + + +++G  + +S+   G +++ + N    L+ +L   +++V+FY+ITTLHN+LL        V  + CI  ++  + K         K L IC DCL  L++++   K
Sbjct:  197 EAVRFLAGAIYNMSQKKNGLKIIFEANVIPCLVKLLGFSMESVLFYAITTLHNLLLYQDGGKEAVRSSGCIPKMVALLQK------NNIKFLTICTDCLQILAFNHQPSK 300
The following BLAST results are available for this feature:
BLAST of Beta-catenin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CTNNB11.253e-632.69catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB11.392e-632.69catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB11.392e-632.69catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB11.392e-632.69catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB11.392e-632.69catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
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BLAST of Beta-catenin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Beta-catenin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
arm9.527e-630.10gene:FBgn0000117 transcript:FBtr0089990[more]
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BLAST of Beta-catenin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
jupb4.694e-726.74junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-1... [more]
ctnnb14.697e-733.65catenin (cadherin-associated protein), beta 1 [Sou... [more]
jupb5.171e-726.74junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-1... [more]
ctnnb15.455e-733.65catenin (cadherin-associated protein), beta 1 [Sou... [more]
ctnnb28.007e-732.69catenin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2... [more]
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BLAST of Beta-catenin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dctn54.545e-732.38dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963... [more]
dctn51.354e-632.69dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963... [more]
dctn51.391e-632.69dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963... [more]
dctn51.444e-632.69dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963... [more]
dctn51.632e-632.69dynactin subunit 5 [Source:Xenbase;Acc:XB-GENE-963... [more]
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BLAST of Beta-catenin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Ctnnb19.921e-732.69catenin (cadherin associated protein), beta 1 [Sou... [more]
Ctnnb19.921e-732.69catenin (cadherin associated protein), beta 1 [Sou... [more]
Ctnnb11.680e-632.69catenin (cadherin associated protein), beta 1 [Sou... [more]
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BLAST of Beta-catenin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|F1QGH7|CTNB1_DANRE4.118e-633.65Catenin beta-1 OS=Danio rerio OX=7955 GN=ctnnb1 PE... [more]
sp|P26233|CTNB1_XENLA6.593e-632.69Catenin beta-1 OS=Xenopus laevis OX=8355 GN=ctnnb1... [more]
sp|Q9WU82|CTNB1_RAT6.822e-632.69Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ct... [more]
sp|Q02248|CTNB1_MOUSE6.940e-632.69Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 ... [more]
sp|B6V8E6|CTNB1_CANLF7.059e-632.69Catenin beta-1 OS=Canis lupus familiaris OX=9615 G... [more]
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BLAST of Beta-catenin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S6KMF70.000e+0100.00Uncharacterized protein OS=Schmidtea mediterranea ... [more]
A0A291LM110.000e+099.60B-catenin 3 OS=Schmidtea mediterranea OX=79327 PE=... [more]
A0A159X4H16.372e-15599.12CTNNB1-like protein (Fragment) OS=Schmidtea medite... [more]
A0A291LM101.039e-1630.46B-catenin 4 (Fragment) OS=Schmidtea mediterranea O... [more]
A0A1S6KMF01.172e-1630.46Uncharacterized protein OS=Schmidtea mediterranea ... [more]
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BLAST of Beta-catenin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
jupb1.526e-727.91junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-1... [more]
jupb1.641e-727.91junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-1... [more]
jupb1.827e-727.91junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-1... [more]
ctnnb17.538e-732.69catenin beta 1 [Source:NCBI gene;Acc:103035854][more]
ctnnb27.717e-732.69catenin beta-1-like [Source:NCBI gene;Acc:10303457... [more]
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BLAST of Beta-catenin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4
Match NameE-valueIdentityDescription
CTNNB12.333e-833.02catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB13.055e-833.65catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB13.995e-831.43catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
CTNNB18.379e-731.43catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514][more]
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BLAST of Beta-catenin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Beta-catenin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO357281.607e-933.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Beta-catenin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ctnnb18.962e-732.69catenin beta 1 [Source:NCBI gene;Acc:101166738][more]
ctnnb19.637e-732.69catenin beta 1 [Source:NCBI gene;Acc:101166738][more]
ctnnb19.637e-732.69catenin beta 1 [Source:NCBI gene;Acc:101166738][more]
ENSORLT00000004536.21.763e-632.69catenin beta-1 [Source:NCBI gene;Acc:101171502][more]
jupa7.526e-626.04junction plakoglobin [Source:NCBI gene;Acc:1011733... [more]
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BLAST of Beta-catenin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000022923.10.000e+0100.00SMESG000022923.1[more]
SMESG000035212.13.118e-2030.46SMESG000035212.1[more]
SMESG000039528.18.378e-627.27SMESG000039528.1[more]
SMESG000039528.18.519e-627.27SMESG000039528.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30019916 ID=SMED30019916|Name=Beta-catenin|organism=Schmidtea mediterranea sexual|type=transcript|length=2324bp
ATCTCAAAAACCGTAAAAAACGACTTGTAATAAATTCCAATTATTTATTT
TCTTAACGAAATAGCACATGTCGCCATATGTTGATATATATATTTAATAA
ATTTGCTACTGTAATTGTGGTTTAGTATTATTTTGATCAATCAAAATCCA
TCAAAGTCAAACTAAAAATCTGATTGGTCGATTGGAATTAAAAATAATGA
ATAATTATTGAATTAACGTCAGTGTTTTCTACAATAATTCATTTTTTGAA
AAAAATGGATTTAAGTGCTCAAATCGATTCGTCATCAATTTTTTTCGATT
GGGATGATGATTCGTCAACCGAATCGGATTCTGGAATCTCATCGGTGTCA
AGTGATTCTTTCGTCAATCCATTCGACCACAATGACAGTTCTTTCATTTC
AACTGTCACAAATATTGCAAAAGATATCTCACTCCAATCGTCCTCGTATT
CAAAAGCACTCATCGATTTCACAATCTCGGGACTTATTTCCAATGACACT
TTTATTCGTCGAAGTGCCGCTGTGTTTTTATGGCAACTGCTGCGAGCCTG
CAACATGCCGTTTTATGATGGGATTGAAACGAAAGAAAAAATGATGTTAC
TTTTAAAAGCGTCAGATGATTTGATTGTGTCTTTGGAGGCAGCTTTGAAG
TTGGATTCTTTTTCTAATCAAATGCTCTATTGGGTGAGCGGATGTTTTCA
CTATATATCTCGAACCCCATTCGGATGTGAGATGTTGTTGAAGAACAACT
CGGATATTTTGATCTCAATGTTGAATTGTGAATTACAAGCGGTGGTTTTT
TATTCTATAACCACTCTACACAATATTCTCCTCACCTGTCCCTGTCCGTA
TCGGGGAGTGCATTTAACGAATTGTATCAACAATATCATTGACAAAATCC
ACAAACCGTCGAATCTCGGTGAAACGAAATTCAAACTGCTAGCCATTTGC
ATAGATTGCCTGTCGAATTTGTCGTATCACAATAACGCCGTGAAAATCCA
AATCTCCCGCCACATTTCTGCCATTCAGATCATCATCTCCAATCTCGTTG
CATATTCCAACAATGAAAAACTGCTTTTACTCGGCCTGAAATTGCTCAAA
ATCCTTTCCACAGATCAAAGCGCAAAATTCAAAATTTCATCAAACTCAAA
CTTTGCCATTCTCGTTTTGAATTTGTTTAAATCGAAATCGAAAATGAACT
CAAATGTTGGTTGGTTATGTTTTTGACTTTGAGAAATCTTTCAGACATTT
TATTCCAACCAAAATCAGACTTTTGGAAAGTTTACCACGATGTCCTTTAC
CAGATTTGTTTGAGATTTGATGAGATTAGTTGCTTGGAAAACGATGGGCT
TCTCCAGTGTGCTGTCGGCATTTTAGCCAATGCCTCTTGTGATTGTCCGC
AAAACAAAAGCTTATTGGTTAAGACTAAAGTTCTTGATTCGATATTGAAA
ACGCTTTCAGTGACTACTGACAAATTCAAACTTTGGTCCGGGGAGACCTT
GGAAGCAATGTACAGATGTTTGCATCATTTATGTAGTAATCACGAAAGAT
CATTATATGTAATCAACAAATGTCTAATGAGCGACATGAATTTTCTCACA
AATGCCAGTCATATAATTATTTTAAATTCTTCAAAAGATATATCGTTTGC
CAATATTCTATCTCAATCTTTGACAGATATTCCGATTTCCTGGTCAATCT
TGCGTGCTTGGTTAGGACTTGTTCGGCATTTATTTATTCATATAAATAAC
AATCCAACAAAATTTAAAACACAATTAAAACAAACAAACTTCATTAACAG
GATCATTGATTTGCTCAGCGGTTTTAGACGACAAATTGAAAACAATTATC
AAATATTTCTCAATCCAATTTCCGAAATACAAGATCTTCCCTCTGTTCAG
TTTCTCAATCAACTCCATTCAAATCTTGTGTATTTTGAAGGAATAAAAAA
ATAATATTTCCAATTAATTCAAACAAACTTCATTTTCTACCTCTTGATTA
ATGAGTTTTTTTCTGAAAAAAAAATCCAATTTTTCATTTTTCGACCTAAA
AATGAAAATTTGAAGTTTTATTTAAAAACTTTTACAAAAACTCAGCAAAA
TCATTTAAAAACTTACAAGACCGACATTCCAATGCCGAAACTCCAGTGTC
ATGATAAATAATTTTGTTGACAAATAAGCGATACGTCAACATCAACAACA
TCAACAACAACAACAACAACATTTCTTGTCAATCAATTATTGAACTGATT
TGATTCCTGAAATACCAAAGATGTGAAAAATTTGTGTAGATATGTTTCAT
GTGTTTATTGGGAACTGTTCTTTA
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protein sequence of SMED30019916-orf-1

>SMED30019916-orf-1 ID=SMED30019916-orf-1|Name=SMED30019916-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=246bp
MFLTLRNLSDILFQPKSDFWKVYHDVLYQICLRFDEISCLENDGLLQCAV
GILANASCDCPQNKSLLVKTKVLDSILKTLSVTTDKFKLWSGETLEAMYR
CLHHLCSNHERSLYVINKCLMSDMNFLTNASHIIILNSSKDISFANILSQ
SLTDIPISWSILRAWLGLVRHLFIHINNNPTKFKTQLKQTNFINRIIDLL
SGFRRQIENNYQIFLNPISEIQDLPSVQFLNQLHSNLVYFEGIKK*
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protein sequence of SMED30019916-orf-2

>SMED30019916-orf-2 ID=SMED30019916-orf-2|Name=SMED30019916-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=324bp
MDLSAQIDSSSIFFDWDDDSSTESDSGISSVSSDSFVNPFDHNDSSFIST
VTNIAKDISLQSSSYSKALIDFTISGLISNDTFIRRSAAVFLWQLLRACN
MPFYDGIETKEKMMLLLKASDDLIVSLEAALKLDSFSNQMLYWVSGCFHY
ISRTPFGCEMLLKNNSDILISMLNCELQAVVFYSITTLHNILLTCPCPYR
GVHLTNCINNIIDKIHKPSNLGETKFKLLAICIDCLSNLSYHNNAVKIQI
SRHISAIQIIISNLVAYSNNEKLLLLGLKLLKILSTDQSAKFKISSNSNF
AILVLNLFKSKSKMNSNVGWLCF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0007155cell adhesion
GO:0007165signal transduction
GO:0034333adherens junction assembly
Vocabulary: molecular function
TermDefinition
GO:0045296cadherin binding
GO:0005488binding
GO:0004871signal transducer activity
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000044cephalic ganglia
PLANA:0000097ventral nerve cord
PLANA:0000103central nervous system
PLANA:0000142posterior region of the whole animal
PLANA:0000421tail
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 97..323
e-value: 2.6E-32
score: 114.1
NoneNo IPR availablePANTHERPTHR45976:SF1ARMADILLO SEGMENT POLARITY PROTEINcoord: 120..318
NoneNo IPR availablePANTHERPTHR45976FAMILY NOT NAMEDcoord: 120..318
IPR016024Armadillo-type foldSUPERFAMILYSSF48371ARM repeatcoord: 48..294